New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 4129658	25 (0.790)	3 (0.100)	3/234	NT	11.4%	coding (231/942 nt)	PP_3633	ArgC‑like N‑acetyl‑gamma‑glutamyl‑phosphate reductase
	?	NC_002947	= 4129681	23 (0.770)					coding (254/942 nt)	PP_3633	ArgC‑like N‑acetyl‑gamma‑glutamyl‑phosphate reductase

GAGCGCAAGGACCCGCAACGCCGCTGCGAAGCGATCAACAGTGCCGACATCGCCCTGCTGTGCCTGCCCGACGACGCCGCCCGCGAGGCCGTGGCCGCAATCCACAACCCCCAGGTGCGGGTGATCGACGCCAGCTCGGCGCACCGCACCACACCAGGCTGGGTGTATGGCCTGCCGGAGCTTGACGAACAGCAAGCCGAGCGCATCGCGCAAAGCACGCGTGTCAGCAATCCCGGTTGCTATCCCACCGGCGCCATCGCGCTGCTGCACCCACTGGTCAAGGC  >  NC_002947/4129539‑4129822                                                                                                                                               |                                                                                                                                              gAGCGCAAGGACCCGCAACGCCGCTGCGAAGCGATCAACAGTGCCGACATCGCCCTGCTGTGCCTGCCCGACGACGCCGCCCGCGAGGCCGTGGCCGCAATCCACAACCCCCAGGTGCGGGTGATCGACGCCAGCTCGGCGCAccgcacc                                                                                                                                        <  1:119756‑M2/150‑8 (MQ=255)   gcgcAAGGCCCCGCAACGCCGCTGCGAAGCGATCAACAGTGCCGACATCGCCCTGCTGTGCCTGCCCGACGACGCCGCCCGCGAGGCCGTGGCCGCAATCCACAACCCCCAGGTGCGGGTGATCGACGCCAGCTCGGCGCACCGcaccac                                                                                                                                      <  1:545171/150‑1 (MQ=255)         ggACCCGCAACGCCGCTGCGAAGCGATCAACAGTGCCGACATCGCCCTGCTGTGCCTGCCCGACGACGCCGCCCGCGAGGCCGTGGCCGCAATCCACAACCCCCAGGTGCGGGTGATCGACGCCAGCTCGGCGCACCGCACCACACCAgg                                                                                                                                >  1:455786/1‑150 (MQ=255)               gCAACGCCGCTGCGAAGCGATCAACAGTGCCGACATCGCCCTGCTGTGCCTGCCCGACGACGCCGCCCGCGAGGCCGTGGCCGCAATCCACAACCCCCAGGTGCGGGTGATCGACGCCAGCTCGGCGCACCGCACCACACCAGGCTGGgt                                                                                                                          >  2:246316/1‑150 (MQ=255)                       gcTGCGAAGCGATCAACAGTGCCGACATCGCCCTGCTGTGCCTGCCCGACGACGCCGCCCGCGAGGCCGTGGCCGCAATCCACAACCCCCAGGTGCGGGTGATCGACGCCAGCTCGGCGCACCGCACCACACCAGGCTGGGTGTATGGcc                                                                                                                  <  2:850026/150‑1 (MQ=255)                       gcTGCGAAGCGATCAACAGTGCCGACATCGCCCTGCTGTGCCTGCCCGACGACGCCGCCCGCGAGGCCGTGGCCGCAATCCACAACCCCCAGGTGCGGGTGATCGACGCCAGCTCGGCGCACCGCACCACACCAGGCTGGGTGTATGGcc                                                                                                                  <  2:433904/150‑1 (MQ=255)                        cTGCGAAGCGATCAACAGTGCCGACATCGCCCTGCTGTGCCTGCCCGACGACGCCGCCCGCGAGGCCGTGGCCGCAATCCACAACCCCCAGGTGCGGGTGATCGACGCCAGCTCGGCGCACCGCACCACACCAGGCTGGGTGTATGGCCt                                                                                                                 <  2:455786/150‑1 (MQ=255)                            gAAGCGATCAACAGTGCCGACATCGCCCTGCTGTGCCTGCCCGACGACGCCGCCCGCGAGGCCGTGGCCGCAATCCACAACCCCCAGGTGCGGGTGATCGACGCCAGCTCGGCGCACCGCACCACACCAGGCTGGGTGTATGGCCTGCCg                                                                                                             >  2:325803/1‑150 (MQ=255)                             aaGCGATCAACAGTGCCGACATCGCCCTGCTGTGCCTGCCCGACGACGCCGCCCGCGAGGCCGTGGCCGCAATCCACAACCCCCAGGTGCGGGTGATCGACGCCAGCTCGGCGCACCGCACCACACCAGGCTGGGTGTATGGCCTGCCgg                                                                                                            >  1:269323/1‑150 (MQ=255)                                            ccGACATCGCCCTGCTGTGCCTGCCCGACGACGCCGCCCGCGAGGCCGTGGCCGCAATCCACAACCCCCAGGTGCGGGTGATCGACGCCAGCTCGGCGCACCGCACCACACCAGGCTGGgt                                                                                                                          >  2:834148/1‑121 (MQ=255)                                            ccGACATCGCCCTGCTGTGCCTGCCCGACGACGCCGCCCGCGAGGCCGTGGCCGCAATCCACAACCCCCAGGTGCGGGTGATCGACGCCAGCTCGGCGCACCGCACCACACCAGGCTGGgt                                                                                                                          <  1:834148/121‑1 (MQ=255)                                                 aTCGCCCTGCTGTGCCTGCCCGACGACGCCGCCCGCGAGGCCGTGGCCGCAATCCACAACCCCCAGGTGCGGGTGATCGACGCCAGCTCGGCGCACCGCACCACACCAGGCTGGGTGTATGGCCTGCCGGAGCTTGACGAACAGCAAGcc                                                                                        <  1:337303/150‑1 (MQ=255)                                                   cGCCCTGCTGTGCCTGCCCGACGACGCCGCCCGCGAGGCCGTGGCCGCAATCCACAACCCCCAGGTGCGGGTGATCGACGCCAGCTCGGCGCACCGCACCACACCAGGCTGGGTGTATGGCCTGCCGGAGCTTGACGAACAGCAAGCCGa                                                                                      <  1:246316/150‑1 (MQ=255)                                                        tgctgTGCCTGCCCGACGACGCCGCCCGCGAGGCCGTGGCCGCAATCCACAACCCCCAGGTGCGGGTGATCGACGCCAGCTCGGCGCACCGCACCACACCAGGCTGGGTGTATGGCCTGCCGGAGCTTGACGAACAGCAAGCCGAGCGCa                                                                                 <  1:325803/150‑1 (MQ=255)                                                         gctgTGCCTGCCCGACGACGCCGCCCGCGAGGCCGTGGCCGCAATCCACAACCCCCAGGTGCGGGTGATCGACGCCAGCTCGGCGCACCGCACCACACCAGGCTGGGTGTATGGCCTGCCGGAGCTTGACGAACAGCAAGCCGAGCGCAt                                                                                <  1:218650/150‑1 (MQ=255)                                                                       acgacgCCGCCCGCGAGGCCGTGGCCGCAATCCACAACCCCCAGGTGCGGGTGATCGACGCCAGCTCGGCGCACCGCACCACACCAGGCTGGGTGTATGGCCTGCCGGAGCTTGACGAACAGCAAGCCGAGCGCATCGCGCAAAGCAcgc                                                                  <  2:119756/150‑1 (MQ=255)                                                                            gccgccCGCGAGGCCGTGGCCGCAATCCACAACCCCCAGGTGCGGGTGATCGACGCCAGCTCGGCGCACCGCACCACACCAGGCTGGGTGTATGGCCTGCCGGAGCTTGACGAACAGCAAGCCGAGCGCATCGCGCAAAGCACGCGTGTc                                                             >  2:322427/1‑150 (MQ=255)                                                                                            tGGCCGCAATCCACAACCCCCAGGTGCGGGTGATCGACGCCAGCTCGGCGCACCGCACCACACCAGGCTGGGTGTATGGCCTGCCGGAGCTTGACGAACAGCAAGCCGAGCGCATCGCGCAAAGCCCGCGTGTCAGCAATCCCGGTTGCt                                             <  2:269323/150‑1 (MQ=255)                                                                                                    aTCCACAACCCCCAGGTGCGGGTGATCGACGCCAGCTCGGCGCACCGCACCACACCAGGCTGGGTGTATGGCCTGCCGGAGCTTGACGAACAGCAAGCCGAGCGCATCGCGCAAAGCACGCGTGTCAGCAATCCCGGTTGCTATCCCAcc                                     >  2:574191/1‑150 (MQ=255)                                                                                                       cacaACCCCCAGGTGCGGGTGATCGACGCCAGCTCGGCGCACCGCACCACACCAGGCTGGGTGTATGGCCTGCCGGAGCTTGACGAACAGCAAGCCGAGCGCATCGCGCAAAGCACGCGTGTCAGCAATCCCGGTTGCTATCCCACCGgc                                  >  1:672236/1‑150 (MQ=255)                                                                                                       cacaACCCCCAGGTGCGGGTGATCGACGCCAGCTCGGCGCACCGCACCACACCAGGCTGGGTGTATGGCCTGCCGGAGCTTGACGAACAGCAAGCCGAGCGCATCGCGCAAAGCACGCGTGTCACCAATCCCGGTTGCTATCCCACCGgc                                  >  2:101379/1‑150 (MQ=255)                                                                                                        acaACCCCCAGGTGCGGGTGATCGACGCCAGCTCGGCGCACCGCACCACACCAGGCTGGGTGTATGGCCTGCCGGAGCTTGACGAACAGCAAGCCGAGCGCATCGCGCAAAGCACGCGTGTCAGCAATCCCGGTTGCTATCCCACCGgcg                                 >  1:799511/1‑150 (MQ=255)                                                                                                               ccAGGTGCGGGTGATCGACGCCAGCTCGGCGCAccgcacctgggggttgtggattgcggccacggcctcgcgggcggcgtcgtcgggcaggcacagcagggcgatgtcggcactgttgatcgattcgcagcggcgttgcgggtcattgcg                          <  1:390997‑M2/150‑118 (MQ=255)                                                                                                                      cGGGTGATCGACGCCAGCTCGGCGCAccgcacctgggggttgtggattgcggccacggcc                                                                                                             <  2:197689‑M2/60‑35 (MQ=255)                                                                                                                      cGGGTGATCGACGCCAGCTCGGCGCAccgcacctgggggttgtggattgcggccacggcc                                                                                                             >  1:197689‑M2/1‑26 (MQ=255)                                                                                                                                gcGCCAGCTCGGCGCACCGCACCACACCAGGCTGGGTGTATGGCCTGCCGGAGCTTGACTAACAGCACGCCCACGGCGTCGCGCAAAGCACGCGTGTCAGCAATCCCGGTTGCTATCCCACCGGCGCCATCGCGCTGCTGCACCCACTgg         <  2:416805/149‑1 (MQ=255)                                                                                                                                      gCTCGGCGCACCGCACCACACCAGGCTGGGTGTATGGCCTGCCGGAGCTTGACGAACAGCAAGCCGAGCGCGTCGCGCAAAGCACGCGTGTCAGCAATCCCGGTTGCTATCCCACCGGCGCCATCGCGCTGCTGCACCCACTGGTCAAgg   <  2:791507/150‑1 (MQ=255)                                                                                                                                       cTCGGCGCACCGCACCACACCAGGCTGGGTGTATGGCCTGCCGGAGCTTGACGAACAGCAAGCCGAGCGCATCGCGCAAAGCACGCGTGTCAGCAATCCCGGTTGCTATCCCACCGGCGCCATCGCGCTGCTGCACCCACTGGTCAAGGc  <  2:672236/150‑1 (MQ=255)                                                                                                                                               |                                                                                                                                              GAGCGCAAGGACCCGCAACGCCGCTGCGAAGCGATCAACAGTGCCGACATCGCCCTGCTGTGCCTGCCCGACGACGCCGCCCGCGAGGCCGTGGCCGCAATCCACAACCCCCAGGTGCGGGTGATCGACGCCAGCTCGGCGCACCGCACCACACCAGGCTGGGTGTATGGCCTGCCGGAGCTTGACGAACAGCAAGCCGAGCGCATCGCGCAAAGCACGCGTGTCAGCAATCCCGGTTGCTATCCCACCGGCGCCATCGCGCTGCTGCACCCACTGGTCAAGGC  >  NC_002947/4129539‑4129822

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.