mutation predictions | marginal predictions | summary statistics | genome diff | command line log
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breseq version 0.33.1 revision 8505477f25b3
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Marginal new junction evidence (sorted from low to high skew) | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5235122 = | 15 (0.470) | 4 (0.130) | 3/236 | NT | 20.4% | coding (408/2325 nt) | fecA | outer membrane ferric citrate porin |
| ? | NC_002947 | 5235146 = | 17 (0.560) | coding (432/2325 nt) | fecA | outer membrane ferric citrate porin | |||||
| * | ? | NC_002947 | 4754993 = | 32 (1.010) | 5 (0.170) | 3/234 | NT | 13.7% | coding (189/1965 nt) | pvdT | pyoverdine ABC transporter ATP‑binding protein/permease |
| ? | NC_002947 | 4755019 = | 33 (1.100) | coding (215/1965 nt) | pvdT | pyoverdine ABC transporter ATP‑binding protein/permease | |||||
| * | ? | NC_002947 | 3207631 = | 42 (1.330) | 4 (0.130) | 3/246 | NT | 8.7% | coding (1237/2415 nt) | PP_2812 | transporter |
| ? | NC_002947 | 3207656 = | 42 (1.340) | coding (1262/2415 nt) | PP_2812 | transporter | |||||
| * | ? | NC_002947 | = 1938589 | 20 (0.630) | 4 (0.130) | 3/238 | NT | 18.1% | coding (510/1299 nt) | PP_1738 | hypothetical protein |
| ? | NC_002947 | = 1938605 | 17 (0.560) | coding (494/1299 nt) | PP_1738 | hypothetical protein | |||||
| * | ? | NC_002947 | 1182987 = | 40 (1.260) | 4 (0.130) | 3/238 | NT | 9.7% | coding (1404/1458 nt) | mltF | membrane‑bound lytic murein transglycosylase F |
| ? | NC_002947 | 1183008 = | 36 (1.180) | coding (1383/1458 nt) | mltF | membrane‑bound lytic murein transglycosylase F | |||||
| * | ? | NC_002947 | = 679307 | 31 (0.980) | 4 (0.140) | 3/230 | NT | 12.4% | coding (191/1278 nt) | PP_0582 | thiolase family protein |
| ? | NC_002947 | = 679323 | 28 (0.950) | coding (207/1278 nt) | PP_0582 | thiolase family protein | |||||