New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 2937810 = | NA (NA) | 7 (0.560) | 6/264 | 0.8 | NA | coding (1288/1329 nt) | PP_2570 | transposase |
? | NC_002947 | 2937843 = | NA (NA) | coding (1255/1329 nt) | PP_2570 | transposase |
TGCCGGCCCCTTCGCGGGTGAACCCGCTCTCATCAAACAAAATGCAACCCATTGTTTTCTAAGCACTCAAGCGGCCACCAGTTGATACCCCAGTTTCCGGGCTTTGCGAAGCAAAGCCCGGACCTGCCGGTCTTGGCTTCTGGCTTCGAA > NC_002947/2937703‑2937852 | tgCCGGCCTCTCCTCGGGTAAACCCGCTCTCATCAATCATAATTCAACCCATTGTTTTCTAAGCACTCAAGCGGACACCAGTTGATACCCCAGTGTCCGGGCTTTGCGAAGCAAAGCCCGGACCTGCCGGTCTTGGCTTCTGGCTTCGaa < 1:126844/150‑1 (MQ=11) | TGCCGGCCCCTTCGCGGGTGAACCCGCTCTCATCAAACAAAATGCAACCCATTGTTTTCTAAGCACTCAAGCGGCCACCAGTTGATACCCCAGTTTCCGGGCTTTGCGAAGCAAAGCCCGGACCTGCCGGTCTTGGCTTCTGGCTTCGAA > NC_002947/2937703‑2937852 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |