Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_002947	3349067	3349109	43	2 [1]	[1] 3	PP_2944	sensor histidine kinase

GAGGACGCGCTGCGCATGAACGCAGGCGCGTTGACCCGGCATCAAGTGAGGGTAGTGCGCGACTTCGCAGATCTGCCTCTGGTGATGGGCGACC  >  NC_002947/3349107‑3349200    |                                                                                           gAGGACGCGCTGCGCATGAACGCAGGCGCGTTGAccc                                                           <  2:297311/37‑1 (MQ=255)    gACGCGCTGCGCATGAACGCAGGCGCGTTGACCCGGCATCAAGTGAGGGTAGTGCGCGACTTCGCAGATCTGCCTCTGGTGATGGGCGAcc  <  1:286891/91‑1 (MQ=255)    gACGCGCTGCGCATGAACGCAGGCGCGTTGACCCGGCATCAAGTGAGGGTAGTGCGCGACTTCGCAGATCTGCCTCTGGTGATGGGCGAcc  >  2:286891/1‑91 (MQ=255)    |                                                                                           GAGGACGCGCTGCGCATGAACGCAGGCGCGTTGACCCGGCATCAAGTGAGGGTAGTGCGCGACTTCGCAGATCTGCCTCTGGTGATGGGCGACC  >  NC_002947/3349107‑3349200

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑