| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1499443 = | 30 (0.690) | 15 (0.420) | 14/218 | 1.7 | 38.6% | intergenic (+13/‑153) | trpS/zapE | tryptophan‑‑tRNA ligase/nucleoside triphosphate hydrolase domain‑containing protein |
| ? | NC_002947 | 1499526 = | 23 (0.640) | intergenic (+96/‑70) | trpS/zapE | tryptophan‑‑tRNA ligase/nucleoside triphosphate hydrolase domain‑containing protein | |||||
CGCATCGAAGGCCTGAGCTTCGGCCTGTGGCTCAATGGCGAGCAGGTTGCCGACGGGCCGCAGTTCGACAACGCTGAAGCCCGTGATGCGGCCATTCAGAGCCTGAACGAAGCCTTGGCACCACAGCAGGACTGAGGCTGCCAAACGGTGGGAGCGGGCGTGCCCGCGAAACAGGCGCCGCGGTGCATGGCACCGGCTTTGCCGGTGTTCGCGGGCACGCCCGCTCCCACAGACTGATTGCCATTAAGCGGGCCTATCGCTACAGTGACGGCCCGTTTTTTGTTGCCTCGCTAAC > NC_002947/1499296‑1499590 | cGCATCGAAGGCCTGAGCTTCGGCCTGTGGCTCAATGGCGAGCAGGTTGCCGACGGGCCGCAGTTCGACAACGCTGAAGCCCGTGATGCGGCCATTCAGAGCCTGAACGAAGCCTTGGCACCACAGCAGGACTGAGGCTGCCAAACGGTg < 2:810587/150‑1 (MQ=255)cGCATCGAAGGCCTGAGCTTCGGCCTGTGGCTCAATGGCGAGCAGGTTGCCGACGGGCCGCAGTTCGACAACGCTGAAGCCCGTGATGCGGCCATTCAGAGCCTGAACGAAGCCTTGGCACCACAGCAGGACTGAGGCTGCCAAACGGTg < 2:1058041/150‑1 (MQ=255)accgcagtttcctgcgccgcgtcatggaagaagtcgggacgtttcagatctgcttgatagcgttctaagggagtcatgattcgttagcgaggcaacaaaaaacgggccgtcactgtagcgataggcccgcttaatggcaatcagtctgtg > 1:764665‑M1/148‑150 (MQ=255) tttcctgcgccgcgtcatggaagaagtcgggacgtttcagatctgcttgatagcgttctaagggagtcatgattcgttagcgaggcaacaaaaaacgggccgtcactgtagcgataggcccgcttaatggcaatcagtctGTGGGAGCgg > 1:1071816‑M1/141‑150 (MQ=255) aaGGCCTGAGCTTCGGCCTGTGGCTCCAGGGTGAGCAGGTTGCCGACGGGCCGCAGTTCGACAACGCTGAAGCCCGTGATGCGGCCATTCAGAGCCTGAACGAAGCCTTGGCACCACAGCAGGACTGAGGCTGCCAAACGGTGGGAGCgg < 1:140/150‑1 (MQ=255) ggaagaagtcgggacgtttcagatctgcttgatagcgttctaagggagtcatgattcgttagcgaggcaacaaaaaacgggccgtcactgtagcgataggcccgcttaatggcaatcagtctGTGGGAGCGGGCGTGCCCGCGAAACAgg < 2:331511‑M1/28‑1 (MQ=255) agaagtcgggacgtttcagatctgcttgatagcgttctaagggagtcatgattcgttagcgaggcaacaaaaaacgggccgtcactgtagcgataggcccgcttaatggcaatcagtctGTGGGAGCGGGCGTGCCCGCGAAACAGgcgc < 1:581435‑M1/31‑1 (MQ=255) gCTCAATGGCGAGCAGGTTGCCGACGGGCCGCAGTTCGACAACGCTGAAGCCCGTGATGCGGCCATTCAGAGCCTGAAAGAAGCCTTGGCACCACAGCAGGACTGAGGCTGCCAAACGGTGGGAGCGGGCGTGCCCGCGAAACAGGcgcc > 1:348104/1‑150 (MQ=255) aTGGCGAGCAGGTTGCCGACGGGCCGCAGTTCGACAACGCTGAAGCCCGTGATGCGGCCATTCAGAGCCTGAACGAAGCCTTGGCACCACAGCAGGACTGAGGCTGCCAAACGGTGGGAGCGGGCGTGCCCGCGAAACAGGCGCCGCGGt < 1:120462/150‑1 (MQ=255) gacgtttcagatctgcttgatagcgttctaagggagtcatgattcgttagcgaggcaacaaaaaacgggccgtcactgtagcgataggcccgcttaatggcaatcagtctGTGGGAGCgg > 1:281168‑M1/111‑120 (MQ=255) gacgtttcagatctgcttgatagcgttctaagggagtcatgattcgttagcgaggcaacaaaaaacgggccgtcactgtagcgataggcccgcttaatggcaatcagtctGTGGGAGCgg < 2:281168‑M1/10‑1 (MQ=255) tttcagatctgcttgatagcgttctaagggagtcatgattcgttagcgaggcaacaaaaaacgggccgtcactgtagcgataggcccgcttaatggcaatcagtctGTGGGAGCGGGCGTGCCCGCGAAACAGGCGCCGCGGTGCATGGc < 1:555094‑M1/44‑1 (MQ=255) tcagatctgcttgatagcgttctaagggagtcatgattcgttagcgaggcaacaaaaaacgggccgtcactgtagcgataggcccgcttaatggcaatcagtctGTGGGAGCGGGCGTGCCCGCGAAACAGGCGCCGCGGTGCATGGCAc < 1:638419‑M1/46‑1 (MQ=255) gCCGACGGGCCGCAGTTCGACAACGCTGAAGCCCGTGATGCGGCCATTCAGAGCCTGAACGAAGCCTTGGCACCACAGCAGGACTGAGGCTGCCAAACGGTGGGAGCGGGCGTGCCCGCGAAACAGGCGCCGCGGTGCATGGCACCGGCt > 2:190434/1‑150 (MQ=255) gcttgatagcgttctaagggagtcatgattcgttagcgaggcaacaaaaaacgggccgtcactgtagcgataggcccgcttaatggcaatcagtctGTGGGAGCGGGCGTGCCCGCGAAACAGGCGCCGCGGTGCATGGCACCGGCTTTg > 2:581435‑M1/97‑150 (MQ=255) gggCCGCAGTTCGACAACGCTGAAGCCCGTGATGCGGCCATTCAGAGCCTGAACGAAGCCTTGGCACCACAGCAGGACTGAGGCTGCCAAACGGTGGGAGCGGGCGTGCCCGCGAAACAGGCGCCGCGGTGCATGGCACCGGCTTTGCCg < 1:190434/150‑1 (MQ=255) gCCGCAGTTCGACAACGCTGAAGCCCGTGATGCGGCCATTCAGAGCCTGAACGAAGCCTTGGCACCACAGCAGGACTGAGGCTGCCAAACGGTGGGAGCGGGCGTGCCCGCGAAACAGGCGCCGCGGTGCATGGCACCGGCTTTGCCGgt < 2:109083/150‑1 (MQ=255) atagcgttctaagggagtcatgattcgttagcgaggcaacaaaaaacgggccgtcactgtagcgataggcccgcttaatggcaatcagtctGTGGGAGCGGGCGTGCCCGCCAAACAGGCGCCGCGGTGCATGGCACCGGCTTTGCCGgt > 2:638419‑M1/92‑150 (MQ=255) cGCAGTTCGACAACGCTGAAGCCCGTGATGCGGCCATTCAGAGCCTGAACGAAGCCTTGGCAGCACAGCAGGACTGAGGCTGCCAAACGGTGGGAGCGGGCGTGCCCGCGAAACAGGCGCCGCGGTGCATGACACCGGCAAAGCCGgtgc < 2:239417/150‑2 (MQ=39) tctaagggagtcatgattcgttagcgaggcaacaaaaaacgggccgtcactgtagcgataggcccgcttaatggcaatcagtctGTGGGAGCGGGCGTGCCCGCGAAACAGGCGCCGCGGTGCATGGCACCGGCTTTGCCGGTGTTcgcg > 2:555094‑M1/85‑150 (MQ=255) tctaagggagtcatgattcgttagcgaggcaacaaaaaacgggccgtcactgtagcgataggcccgcttaatggcaatcagtctGTGGGAGCGGGCGTGCCCGCGAAACAGGCGCCGCGGTGCATGGCACCGGCTTTGCCGGTGTTcgcg > 2:419486‑M1/85‑150 (MQ=255) tCGACAACGCTGAAGCCCGTGATGCGGCCATTCAGAGCCTGAACGAAGCCTTGGCACCACAGCAGGACTGAGGCTGCCAAACGGTGGGAGCGGGCGTGCCCGCGAAACAGGCGCCGCGGTGCATGGCACCGGCTTTGCCGGTGTTCGCgg < 1:512863/150‑1 (MQ=255) gACAACGCTGAAGCCCGTGATGCGGCCATTCAGAGCCTGAACGAAGCCTTGGCACCACAGCAGGACTGAGGCTGCCAAACGGTGGGAGCGGGCGTGCCCGCGAAACAGGCGCCGCGGTGCATGGCACCGGCTTTGCCGGTGTTCGCGGGc > 1:127857/1‑150 (MQ=255) tgattcgttagcgaggcaacaaaaaacgggccgtcactgtagcgataggcccgcttaatggcaatcagtctGTGGGAGCGGGCGTGCCCGCGAAACAGGCGCCGCGGTGCATGGCACCGGCTTTGc < 2:304778‑M1/55‑1 (MQ=255) tgattcgttagcgaggcaacaaaaaacgggccgtcactgtagcgataggcccgcttaatggcaatcagtctGTGGGAGCGGGCGTGCCCGCGAAACAGGCGCCGCGGTGCATGGCACCGGCTTTGc > 1:304778‑M1/72‑126 (MQ=255) tgattcgttagcgaggcaacaaaaaacgggccgtcactgtagcgataggcccgcttaatggcaatcagtctGTGGGAGCGGGCGTGCCCGCGAAACAGGCGCCGCGGTGCATGGCACCGGCTTTGCCGGTGTTCGCGGGCACGCCCGCTc > 1:331511‑M1/72‑150 (MQ=255) aGCCCGTGATGCGGCCATTCAGAGCCTGAACGAAGCCTTGGCACCACAGCAGGACTGAGGCTGCCAAACGGTGGGAGCGGGCGTGCCCGCGAAACAGGCGCCGCGGTGCATGGCACCGGCTTTGCCGGTGTTCGCGGGCACGCCCGCTcc < 2:30803/150‑1 (MQ=255) aGCCCGTGATGCGGCCATTCAGAGCCTGAACGAAGCCTTGGCACCACAGCAGGACTGAGGCTGCCAAACGGTGGGAGCGGGCGTGCCCGCGAAACAGGCGCCGCGGTGCATGGCACCGGCTTTGCCGGTGTTCGCGGGCACGCCCGCTcc < 2:127857/150‑1 (MQ=255) tGATGCGGCCAATAAGAGCCTGAAAGAAGCCTAGCCACCACAGAAGGACTGAGGCTGCCAAACGGTGGGAGGGGGCGTGCCCTGGAAACAGGCGCCGCGGTGCATGGCACCGGCTTTGCCGGTGTTCGCGGGCACGCCCGCTCCCACAGa < 2:607599/150‑1 (MQ=25) aTGCGGCCATTCAGAGCCTGAACGAAGCCTTGGCACCACAGCAGGACTGAGGCTGCCAAACGGTGGGAGCGGGCGTGCCCGCGAAACAGGCGCCGCGGTGCATGGCACCGGCTTTGCCGGTGTTCGCGGGCACGCCCGCTCCCACAGACt > 1:728225/1‑150 (MQ=255) ccATTCAGAGCCTGAACGAAGCCTTGGCACCACAGCAGGACTGAGGCTGCCAAACGGTGGGAGCGGGCGTGCCCGCGAAACAGGCGCCGCGGTGCATGGCACCGGCTTTGCCGGTGTTCGCGGGCACGCCCGCTCCCACAGACTGATTGc < 2:122996/150‑1 (MQ=255) cATTCAGAGCCTGAACGAAGCCTTGGCACCACAGCAGGACTGAGGCTGCCAAACGGTGGGAGCGGGCGTGCCCGCGAAACAGGCGCCGCGGTGCATGGCACCGGCTTTGCCGGTGTTCGCGGGCACGCCCGCTCCCACAGACTGATTGcc < 2:17531/150‑1 (MQ=255) aacaaaaaacgggccgtcactgtagcgataggcccgcttaatggcaatcagtctGTGCGAGCGGGCGTGCCCGCGAAACAGGCGCCGCGGTGCATgg < 1:146908‑M1/43‑1 (MQ=255) aacaaaaaacgggccgtcactgtagcgataggcccgcttaatggcaatcagtctGTGCGAGCGGGCGTGCCCGCGAAACAGGCGCCGCGGTGCATgg > 2:146908‑M1/55‑97 (MQ=255) aTTCAGTGCCTGAACGAAGCCTTGGCACCACAGCAGGACTGAGGCTGCCAAACGGTGGGAGCGGGCGTGCCCGCGAAACAGGCGCCGCGGTGCATGGCACCGGCTTTGCCGGTGTTCGCGGGCACGCCCGCTc < 2:1045561/133‑1 (MQ=255) aTTCAGAGCCTGAACGAAGCCTTGGCACCACAGCAGGACTGAGGCTGCCAAACGGTGGGAGCGGGCGTGCCCGCGAAACAGGCGCCGCGGTGCATGGCACCGGCTTTGCCGGTGTTCGCGGGCACGCCCGCTc > 1:1045561/1‑133 (MQ=255) aaaaaacgggccgtcactgtagcgataggcccgcttaatggcaatcagtctGTGGGAGCGGGCGTGCCCGCGAAACAGGCGCCGCGGTGCATGGCACCGGCTTTGCCGGTGTTc < 1:871351‑M1/63‑1 (MQ=255) aaaaaacgggccgtcactgtagcgataggcccgcttaatggcaatcagtctGTGGGAGCGGGCGTGCCCGCGAAACAGGCGCCGCGGTGCATGGCACCGGCTTTGCCGGTGTTc > 2:871351‑M1/52‑114 (MQ=255) gagCCTGAACGAAGCCTTGGCACCACAGCAGGACTGAGGCTGCCAAACGGTGGGAGCGGGCGTGCCCGCGAAACAGGCGCCGCGGTGCATGGCACCGGcaaagc < 2:1097177/104‑6 (MQ=255) gagCCTGAACGAAGCCTTGGCACCACAGCAGGACTGAGGCTGCCAAACGGTGGGAGCGGGCGTGCCCGCGAAACAGGCGCCGCGGTGCATGGCACCGGcaaagc > 1:1097177/1‑99 (MQ=255) gAACGAAGCCTTGGCACCACAGCAGGACTGAGGCTGCCAAACGGTGGGAGCGGGCGTGCCCGCGAAACAGGCGCCGCGGTGCATGGCACCGGCTTTGCCGGTGTTCGCGGGCACGCCCGCTCCCACAGACTGAtt > 2:378027/1‑135 (MQ=255) gAACGAAGCCTTGGCACCACAGCAGGACTGAGGCTGCCAAACGGTGGGAGCGGGCGTGCCCGCGAAACAGGCGCCGCGGTGCATGGCACCGGCTTTGCCGGTGTTCGCGGGCACGCCCGCTCCCACAGACTGAtt < 1:378027/135‑1 (MQ=255) gAACGAAGCCTTGGCACCACAGCAGGACTGAGGCTGCCAAACGGTGGGAGCGGGCGTGCCCGCGAAACAGGCGCCGCGGTGCATGGCACCGGCTTTGCCGGTGTTCGCGGGCACGCCCGCTCCCACAGACTGATTGCCATTAAGCGGGcc < 1:297015/150‑1 (MQ=255) gCCTTGGCACCACAGCAGGACTGAGGCTGCCAAACGGTGGGAGCGGGCGTGCCCGCGAAACAGGCGCCGCGGTGCATGGCACCGGCTTTGCCGGTGTTCGCGGGCACGCCCGCTCCCACAGACTGATTGCCATTAAGCGGGCCTAt > 1:692901/1‑146 (MQ=255) gCCTTGGCACCACAGCAGGACTGAGGCTGCCAAACGGTGGGAGCGGGCGTGCCCGCGAAACAGGCGCCGCGGTGCATGGCACCGGCTTTGCCGGTGTTCGCGGGCACGCCCGCTCCCACAGACTGATTGCCATTAAGCGGGCCTAt < 2:692901/146‑1 (MQ=255) ccTTGGCACCACAGCAGGACTGAGGCTGCCAAACGGTGGGAGCGGGCGTGCCCGCGAAACAGGCGCCGCGGTGCATGGCACCGGCTTTGCCGGTGTTCGCGGGCACGCCCTGACCCACAGACTGATTGCCATTAAGCGGGCCTATCGCTa > 1:837124/1‑150 (MQ=255) gCTGCCAAACGGTGGGAGCGGGCGTGCCCGCGAAACAGGCGCCGCGGTGCATGGCACCGGCTTTGCCGGTGTTCGCGGGCACGCCCGCTCCCACAGACTGATTGCCATTAAGCGGGc > 2:408933/1‑117 (MQ=255) gCTGCCAAACGGTGGGAGCGGGCGTGCCCGCGAAACAGGCGCCGCGGTGCATGGCACCGGCTTTGCCGGTGTTCGCGGGCACGCCCGCTCCCACAGACTGATTGCCATTAAGCGGGc < 1:408933/117‑1 (MQ=255) cGGTGGGAGCGGGCGTGCCCGCGAAACAGGCGCCGCGGTGCATGGCACCGGCTTTGCCGGTGTTCGCGGGCACGCCCGCTCCCACAGACTGATTGCCATTAAGCGGGCCTATCGCTACAGTGACGGCCCGTTTTTTGTTGCCTCGCTAAc < 2:684800/150‑1 (MQ=255) | CGCATCGAAGGCCTGAGCTTCGGCCTGTGGCTCAATGGCGAGCAGGTTGCCGACGGGCCGCAGTTCGACAACGCTGAAGCCCGTGATGCGGCCATTCAGAGCCTGAACGAAGCCTTGGCACCACAGCAGGACTGAGGCTGCCAAACGGTGGGAGCGGGCGTGCCCGCGAAACAGGCGCCGCGGTGCATGGCACCGGCTTTGCCGGTGTTCGCGGGCACGCCCGCTCCCACAGACTGATTGCCATTAAGCGGGCCTATCGCTACAGTGACGGCCCGTTTTTTGTTGCCTCGCTAAC > NC_002947/1499296‑1499590 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |