New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 1531788 = | 20 (0.760) | 5 (0.230) | 5/226 | 2.2 | 23.0% | coding (130/630 nt) | PP_1344 | hypothetical protein |
? | NC_002947 | 1531884 = | 17 (0.780) | coding (34/630 nt) | PP_1344 | hypothetical protein |
TTTAGATAGGGGCATTTTCACTGAGTTCAAGGCTTGGCAACATGAAAGCTATCGAGAACCAGTCTTGTCTTTGGCTGCCTGTGCCGGCCTCTTCGCGGGTGAACCCGCTCCTACAAGATACCGATAACCCTGGCAGGAGCGGGTTCCCCCGCGAAGAGGCCGGCACAGGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1531958‑1531788 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cccgcgaagaggccggcacaggcaGCCAAAGACAAGACTGGTTCTCGATAGCTTTCATGTTGCCAAGCCTTGAACTCAGTGAAAATGCCCCTATCTAAAACAGGCCCCTGCCAAAACGCTGTATCAGCATCGTGGAAATCCACCACTTTCCTCACCATC > NC_002947/1531884‑1532018 TTTAGATAGGGGCATTTTCACTGAGTTCAAGGCTTGGCAACATGAAAGCTATCGAGAACCAGTCTTGTCTTTGGCTGCCTGTGCCGGCCTCTTGGCGGGTGAACCCGCTCCTACAAGATACCGATAACCCTGGCAGGAGCGGGTTCCCCC < 2:416828/150‑1 ATAGGGGCATTTTCACTGAGTTCAAGGCTTGGCAACATGAAAGCTATCGAGAACCAGTCTTGTCTTTGGCTGCCTGTGCCGGCCTCTTCGCGGGTGAACCCGCTCCTACAAGATACCGATAACCCTGGCAGGAGCGGGTTCCCCCGCGAA < 2:194176/150‑1 AGGGGCATTTTCACTGAGTTCAAGGCTTGGCAACATGAAAGCTATCGAGAACCAGTCTTGTCTTTGGCTGCCTGTGCCGGCCTCTTCGCGGGTGAACCCGCTCCTACAAGATACCGATAACCCTGTCAGGAGCGGGTTCCCCCGCGAAGA < 1:577845/150‑1 GGGCATTTTCACTGAGTTCAAGGCTTGGCAACATGAAAGCTATCGAGAACCAGTCTTGTCTTTGGCTGCCTGTGCCGGCCTCTTCGCGGGTGAACCCGCTCCTACAAGATACCGATAACCCTGGCAGGAGCGGGTTCCCCCGCGAAGAGG > 1:568179/1‑150 GGCATTTTCACTGAGTTCAAGGCTTGGCAACATGAAAGCTATCGAGAACCAGTCTTGTCTTTGGCTGCCTGTGCCGGCCTCTTCTCAGGTGAACCCGCTCCTACAAGATACCGATAACCCTGGCAAGAGCGGGTTCCCCCGCGAAGAGGC > 1:458923/1‑150 GGCATTTTCACTGAGTTCAAGGCTTGGCAACATGAAAGCTATCGAGAACCAGTCTTGTCTTTGGCTGCCTGTGCCGGCCTCTTCGCGGGTGAACCCGCTCCTACAAGATACCGATAACCCTGGCAGGAGCGGGTTCCCCCGCGAAGAGGC > 1:458944/1‑150 CTTTGGCTGCCTGTGCCGGCCTCTTCGCGGGTGAACCCGCTCCTACAAGATACCGATAACCCTGGCAGGAGCGGGTTCCCCCGCGAAGAGGCCGGCACAGG < 1:267542/101‑1 CTTTGGCTGCCTGTGCCGGCCTCTTCGCGGGTGAACCCGCTCCTACAAGATACCGATAACCCTGGCAGGAGCGGGTTCCCCCGCGAAGAGGCCGGCACAGG > 2:267542/1‑101 TTCGCGGGTGAACCCGCTCCTACAAGATACCGATAACCCTGGCAGGAGCGGGTTCCCCCGCGAAGAGGCCGGCACAGGCAGCCAAAGACAAGACTGGTTCTCGATAGCTTTCATGTTGCCAAGCCTT < 1:35511/127‑1 TTCGCGGGTGAACCCGCTCCTACAAGATACCGATAACCCTGGCAGGAGCGGGTTCCCCCGCGAAGAGGCCGGCACAGGCAGCCAAAGACAAGACTGGTTCTCGATAGCTTTCATGTTGCCAAGCCTT > 2:35511/1‑127 TCGCGGGTGAACCCGCTCCTACAAGATACCGATAACCCTGGCAGGAGCGGGTTCCCCCGCGAAGAGGCCGGCACAGGCAGCCAAAGACAAGACTGGTTCTCGATAGCTTTCATGTTGCCAAGCCTTGAACTCAGTGAAAATGCCCCTATC < 1:99304/150‑1 TCGCGGGTGAACCCGCTCCTACAAGATACCGATAACCCTGGCAGGAGCGGGTTCCCCCGCGAAGAGGCCGGCACAGGCAGCCAAAGACAAGACTGGTTCTCGATAGCTTTCATGTTGCCAAGCCTTGAACTCAGTGAAAATGCCCCTATC > 2:99304/1‑150 CCCGCTCCTACAAGATACCGATAACCCTGGCAGGAGCGGGTTCCCCCGCGAAGAGGCCGGCACAGGCAGCCAAAGACAAGACTGGTTCTCGATAGCTTTCATGTTGCCAAGCCTTGAACTCAGTGAAAATGCCCCTATCTAAAACAGGCC > 2:573767/1‑150 AGGCCGGCACAGGCAGCCAAAGACAAGACTGGTTCTCGATAGCTTTCATGTTGCCAAGCCTTGAACTCAGTGAAAATGCCCCTATCTAAAACAGGCCCCTGCCAAAACGCTGTATCAGCATCGTGGAAATCCACCACTTTCCTCACCATC < 1:416828/150‑1 AGGCCGGCACAGGCAGCCAAAGACAAGACTGGTTCTCGATAGCTTTCATGTTGCCAAGCCTTGAACTCAGTGAAAATGCCCCTATCTAAAACAGGCCCCTGCCAAAACGCTGTATCAGCATCGTGGAAATCCACCACTTTCCTCACCATC < 1:573767/150‑1 TTTAGATAGGGGCATTTTCACTGAGTTCAAGGCTTGGCAACATGAAAGCTATCGAGAACCAGTCTTGTCTTTGGCTGCCTGTGCCGGCCTCTTCGCGGGTGAACCCGCTCCTACAAGATACCGATAACCCTGGCAGGAGCGGGTTCCCCCGCGAAGAGGCCGGCACAGGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1531958‑1531788 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cccgcgaagaggccggcacaggcaGCCAAAGACAAGACTGGTTCTCGATAGCTTTCATGTTGCCAAGCCTTGAACTCAGTGAAAATGCCCCTATCTAAAACAGGCCCCTGCCAAAACGCTGTATCAGCATCGTGGAAATCCACCACTTTCCTCACCATC > NC_002947/1531884‑1532018 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |