| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 915078 | 21 (0.790) | 6 (0.270) | 6/228 | 1.9 | 26.4% | intergenic (+43/+105) | fruA/PP_0796 | PTS fructose transporter subunit IIBC/hypothetical protein |
| ? | NC_002947 | = 915135 | 16 (0.730) | intergenic (+100/+48) | fruA/PP_0796 | PTS fructose transporter subunit IIBC/hypothetical protein | |||||
ATCTGCTGGCGATTGTGGCGGGTAGCCTGGTGACAGCGGTGGTGTATGCGGTTATCAAGAAGAGCGAGCGTGTGGAGTTGGCCGTGGCGCCTGCTAAAAGTGTATGAGCAGACCTCGTTCTGTGGGTGCGGCCTTGTGTCGCGAAAGGGCCGCAAAGCGGCCCCGGCAATCTAAGTTGCGAAGCTGAAAATCTGGGGCTGCTTCGCAGCCCTTTCGCGACACAAGGCCGCTCCCACAGAGCCCGCGTTGGCCTTTCAACTGCGATGCTTCTGCCGCAACGGCACCAGTAGATCACC > NC_002947/914929‑915224 | aTCTGCTGGCGATTGTGGCGGGTAGCCTGGTGACAGCGGTGGTGTATGCGGTTATGAAGAAGAGCGAGCGTGTGGAGTTGGCCGTGGCGCCTGCTAAAAGTGTATGAGCGGACCTCGTTCTGTAGGTGCGGCCTTTTGTCGCGAAAGCGC > 2:200259‑M1/1‑150 (MQ=255) gATTGTGGCGGGTAGCCTGGTGACAGCGGTGGTGTATGCGGTTATCAAGAAGAGCGAGCGTGTGGAGTTGGCCGTGGCGCCTGCTAAAAGTGTATGAGCAGACCTCGTTCTGTGGGTGCGGCCTTGTGTCGCGAAAGGGCCGCAAAGCgg > 1:134242/1‑150 (MQ=255) gATTGTGGCGGGTAGCCTGGTGACAGCGGTGGTGTATGCGGTTATCAAGAAGAGCGAGCGTGTGGAGTTGGCCGTGGCGCCTGCTAAAAGTGTATGAGCAGACCTCGTTCTGTGGGAGCGGGCTTGTTTCGCGAAAGGGCtgcgaagcag > 1:163042‑M1/1‑140 (MQ=255) tAGCCTGGTGACAGCGGTGGTGTATGCGGTTATCAAGAAGAGCGAGCGTGTGGAGTTGGCCGTGGCGCCTGCTAAAAGTGTATGAGCAGACCTCGTTCTGTGGGTGCGGCCTTGTGTCGCGAAAGGGCCGCAAAGCGGCCCCGGCAATCt < 2:134242/150‑1 (MQ=255) gCCTGGTGACAGCGGTGGTGTATGCGGTTATCAAGAAGAGCGAGCGTGTGGAGTTGGCCGTGGCGCCTGCTAAAAGTGTATGAGCAGACCTCGTTCTGTGGGTGCGGCCTTGTGTCGCGAAAGGGCCGCAAAGCGGCCCCGGCAATCTaa < 1:200259/150‑1 (MQ=255) aGCGGTGGTGTATGCGGTTATCAAGAAGAGCGAGCGTGTGGAGTTGGCCGTGGCGCCTGCTAAAAGTGTATGAGCAGACCTCGTTCTGTGGGTGCGGCCTTGTGTCGCGAAAGGGCCGCAAAGCGGCCCCGGCAATCTAAGTTGCTAAGc < 1:470598/150‑1 (MQ=255) gtgtATGCGGTTATCAAGAAGAGCGAGCGTGTGGAGTTGGCCGTGGCGCCTGCTAAAAGTGTATGAGCAGACCTCGTTCTGTGGGTGCGGCCTTGTGTCGCGAAAGGGCtgcgaagcagccccagattttcagcttcgcaacttagattg > 1:596378‑M1/1‑109 (MQ=255) agaagaGCGAGCGTGTGGAGTTGGCCGTGGCGCCTGCTAAAAGTGTATGAGCAGACCTCGTTCTGTGGGTGCGGCCTTGTGTCGCGAAAGGGCCGCAAAGCGGCCCCGGCAATCTAAGTTGCGAAGCTGAAAATCTGGGGCTGCTTCGCa < 1:334373/150‑1 (MQ=255) gtgtGGAGTTGGCCGTGGCGCCTGCTAAAAGTGTATGAGCAGACCTCGTTCTGTGGGTGCGGCCTTGTGTCGCGAAAGGGCtgcgaagcagccccagattttcagcttcgcaacttagattgccggggccgctttgcggccctttcgcga < 2:596378‑M1/150‑70 (MQ=255) gtgtGGAGTTGGCCGTGGCGCCTGCTAAAAGTGTATGAGCAGACCTCGTTCTGTGGGTGCGGCCTTGTGTCGCGAAAGGGCCGCAAAGCGGCCCCGGCAATCTAAGTTGCGAAGCTGAAAATCTGGGGCTGCTTCGCAgccctttcgcga > 1:637179‑M2/1‑138 (MQ=255) gtgtGGAGTTGGCCGGGGCGCCTGCTAAAAGTGTATGAGCAGACCTCGTTCTGTGGGTGCGGCCTTGTGTCGCGAAAGGGCCGCAAAGCGGCCCCGGCAATCTAAGTTGCGAAGCTGAAAATCGGGGGCTGCTTCGCAgccctttcgcga > 1:212355‑M2/1‑138 (MQ=255) gAGTTGGCCGTGGCGCCTGCTAAAAGTGTATGAGCAGACCTCGTTCTGTGGGTGCGGCCTTGTGTCGCGAAAGGGCtgcgaagcagccccagattttcagcttcgcaacttagattgccggggccgctttgcggcc > 2:380743‑M1/1‑76 (MQ=255) gAGTTGGCCGTGGCGCCTGCTAAAAGTGTATGAGCAGACCTCGTTCTGTGGGTGCGGCCTTGTGTCGCGAAAGGGCtgcgaagcagccccagattttcagcttcgcaacttagattgccggggccgctttgcggcc < 1:380743‑M1/136‑61 (MQ=255) ttGGCCGTGGCGCCTGCTAAAAGTGTATGAGCAGACCTCGTTCTGTGGGTGCGGCCTTGTGTCGCGAAAGGGCCGCAAAGCGGCCCCGGCAATCTAAGTTGCGAAGCTGAAAATCTGGGGCTGCTTCGCa > 1:499895/1‑130 (MQ=255) ttGGCCGTGGCGCCTGCTAAAAGTGTATGAGCAGACCTCGTTCTGTGGGTGCGGCCTTGTGTCGCGAAAGGGCCGCAAAGCGGCCCCGGCAATCTAAGTTGCGAAGCTGAAAATCTGGGGCTGCTTCGCa < 2:499895/130‑1 (MQ=255) tgttaaaAGTGTATGAGCAGACCTCGTTCTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCtgcgaagcagccccagattttcagcttcgcaacttagattgccggggccgctttgcggccctttcgcgacacaaggccgcacccacagaac < 2:163042‑M1/147‑92 (MQ=255) tAAAAGTGTATGAGCAGACCTCGTTCTGTGGGTGCGGCCTTGTGTCGCGAAAGGGCCGCAAAGCGGCCCCGGCAATCTAAGTTGCGAAGCTGAAAATCTGGGGCTGCTTCGCAGCCCTTTCGCGACACAAGGCCGCTCCCACCGCGCCcg > 1:152980/1‑150 (MQ=255) aaGTGTATGAGCAGACCTCGTTCTGTGGGTGCGGCCTTTAATGGTTATGTGCCCGCAAAGCGGCCCCGGCAATTAAATGTGCGAAGCTGAAAATCGGGGGCTGCTTCGCAGCCCTTTCGCGACACAAGGCCGCTCCCACAGAGCCCGCGt < 1:304122/150‑1 (MQ=25) aaGTGTATGAGCAGACCTCGTTCTGTGGGTGCGGCCTTGTGTCGCGAAAGGGCCGCAAAGCGGCCCCGGCAATCTAAGTTGCGAAGCTGAAAATCTGGGGCTGCTTCGCAGCCCTTTCGCGACACAAGGCCGCTCCCACAGAGCCCGCGt > 2:573735/1‑150 (MQ=255) cTCGTTCTGTGGGTGCGGCCTTGTGTCGCGAAAGGGCCGCAAAGCGGCCCCGGCAATCTAAGTTGCGAAGCTGAAAATCTGGGGCTGCTTCGCAGCCCTTTCGCGACACAAGGCCGCTCCCACAGAGCCCGCGTTGGCCTTTCAACTGCg > 2:218655/1‑150 (MQ=255) tCGTTCTGTGGGTGCGGCCTTGTGTCGCGAAAGGGCCGCAAAGCGGCCCCGGCAATCTaa < 1:238168/60‑1 (MQ=255) tCGTTCTGTGGGTGCGGCCTTGTGTCGCGAAAGGGCCGCAAAGCGGCCCCGGCAATCTaa > 2:238168/1‑60 (MQ=255) tCGTTCTGTGGGTGCGGCCTTGTGTCGCGAAAGGGCCGCAAAGCGGCCCCGGCAATCTAAGTTGCGAAGCTGAAAATCTgg > 1:25025/1‑81 (MQ=255) tCGTTCTGTGGGTGCGGCCTTGTGTCGCGAAAGGGCCGCAAAGCGGCCCCGGCAATCTAAGTTGCGAAGCTGAAAATCTgg < 2:25025/81‑1 (MQ=255) gTTCTGTGGGTGCGGCCTTGTGTCGCGAAAGGGCCGCAAAGCGGCCCCGGCAATCTAAGTTGCGAAGCTGAAAATCTGGGGCTGCTTCGCAgccctttcgcgacacaaggccgctcccacagaacgaggtctgctcatacacttttaaca < 2:163042‑M2/150‑60 (MQ=255) ttCTGTGGGTGCGGCCTTGTGTCGCGAAAGGGCCGCAAAGCGGCCCCGGCAATCTAAGTTGCGAAGCTGAAAATCTGGGGCTGCTTCGCAGCCCTTTCGCGACACAAGGCCGCTCCCACAGAGCCCGCGTTGGCCTTTCAACTGCGATGc < 1:573735/150‑1 (MQ=255) gggTGCGGCCTTGTGTCGCGAAAGGGCCGCAAAGCGGCCCCGGCAATCTAAGTTGCGAAGCTGAAAATCTGGGGCTGCTTCGCAGCCCTTTCGCGACACAAGGCCGCTCCCACAGAGCCCGCGTTGGCCTTTCAACTGCGATGCTTCTGc < 1:218655/150‑1 (MQ=255) gCCTTGTGTCGCGAAAGGGCCGCAAAGCGGCCCCGGCAATCTAAGTTGCGAAGCTGAAAATCTGGGGCTGCTTCGCAGCCCTTTCGCGACACAAGGCCGCTCCCACAGAGCCCGCGTTGGCCTTTCAACTGCGATGCTTCTGCCGCAACg > 2:353136/1‑150 (MQ=255) tCGCGAAAGGGCtgcgaagcagcccccgattttcagcttcgcaacttagattgccggggccgctttgcggccctttcgcgacacaaggccgcacccacagaacgaggtctgctcatacacttttagcaggcgccccggccaactccacac > 1:212355‑M1/1‑12 (MQ=255) tCGCGAAAGGGCtgcgaagcagccccagattttcagcttcgcaacttagattgccggggccgctttgcggccctttcgcgacacaaggccgcacccacagaacgaggtctgctcatacacttttagcaggcgccacggccaactccacac > 1:637179‑M1/1‑12 (MQ=255) tCGCGAAAGGGCCGCAAAGCGGCCCCGGCAATCTAAGTTGCGAAGCTGAAAATCTGGGGCTGCTTCGCAgccctttcgcgacacaaggccgcacccacagaacgaggtctgctcatacacttttagcaggcgccacggccaactccacac < 2:596378‑M2/150‑82 (MQ=255) tCGCGAAAGGGCCGCAAAGCGGCCCCGGCAATCTAAGTTGCGAAGCTGAAAATCTGGGGCTGCTTCGCAGCCCTTTCGCGACACAAGGCCGCTCCCACAGAGCCCGCGTTGGCCTTTCAACTGCGATGCTTCTGCCGCAACGGCAc < 1:411490/146‑1 (MQ=255) tCGCGAAAGGGCCGCAAAGCGGCCCCGGCAATCTAAGTTGCGAAGCCGAAAATCTGGGGCTGCTTCGCAGCCCTTTCGCGACACAAGGCCGCTCCCACAGAGCCCGCGTTGGCCTTTCAACTGCGATGCTTCTGCCGCAACGGCAc > 2:411490/1‑146 (MQ=255) gggCCGCAAAGCGGCCCCGGCAATCTAAGTTGCGAAGCTGAAAATCTGGGGCTGCTTCGCAGCCCTTTCGCGACACAAGGCCGCTCCCACAGAGCCCGCGTTGGCCTTTCAACTGCGATGCTTCTGCCGCAACGGCACCAGTAGATCAcc > 2:63124/1‑150 (MQ=255) ggCCGCAAAGCGGCCCCGGCAATCTAAGTTGCGAAGCTGAAAATCTGGGGCTGCTTCGCAgccctttcgcgacacaaggccgcacccacagaacgaggtctgctcatacacttttagcaggcgccacggccaactc > 2:380743‑M2/1‑60 (MQ=255) ggCCGCAAAGCGGCCCCGGCAATCTAAGTTGCGAAGCTGAAAATCTGGGGCTGCTTCGCAgccctttcgcgacacaaggccgcacccacagaacgaggtctgctcatacacttttagcaggcgccacggccaactc < 1:380743‑M2/136‑77 (MQ=255) | ATCTGCTGGCGATTGTGGCGGGTAGCCTGGTGACAGCGGTGGTGTATGCGGTTATCAAGAAGAGCGAGCGTGTGGAGTTGGCCGTGGCGCCTGCTAAAAGTGTATGAGCAGACCTCGTTCTGTGGGTGCGGCCTTGTGTCGCGAAAGGGCCGCAAAGCGGCCCCGGCAATCTAAGTTGCGAAGCTGAAAATCTGGGGCTGCTTCGCAGCCCTTTCGCGACACAAGGCCGCTCCCACAGAGCCCGCGTTGGCCTTTCAACTGCGATGCTTCTGCCGCAACGGCACCAGTAGATCACC > NC_002947/914929‑915224 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |