| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 2048853 | 17 (0.640) | 6 (0.260) | 5/240 | 2.3 | 28.6% | intergenic (+49/+90) | PP_1821/PP_1822 | glutathione S‑transferase family protein/hypothetical protein |
| ? | NC_002947 | = 2048910 | 15 (0.650) | intergenic (+106/+33) | PP_1821/PP_1822 | glutathione S‑transferase family protein/hypothetical protein | |||||
GCGGGTCAGCAGCCACCCGCGGCATGTGCCGATGGTGGGCTGAAAACCGACCTGTTTTCCAGGCGCTTGCGCAATCCTTGTGGGAGCGGGCGTGCCCGCGAACACGGGCGCAGCCCGTGCCAACCACCGCGGTGCCTG‑CTTCGCG‑GGCTCGCCCGCTCCCACAAGGGATCTGCAGCGTCAGTCAGATGGCGGCAAACCGCTCATCCAGGTAAGCGATGATTGCCTTGGACTCATACATCCAGGTCACCTTGCCGGCTTCTTCAATGCGCAGGCATG > NC_002947/2048762‑2049037 | gCGGGTCAGCAGCCACCCGCGGCATGTGCCGATGGTGGGCTGAAAACCGACCTGTTTTCCAGGCGCTTGCGCAATCCTTGTGGGAGCGGGCGTGCCCGCGAACACGGGCGCAGCCCGTGCCAACCACCGCGGTGCCTG‑CTTCGCG‑GGCTc < 2:436718‑M2/150‑2 (MQ=255) ggTCAGCAGCCACCCGCGGCATGTGCCGATGGTGGGCTGAAAACCGACCTGTTTTCCAGGCGCTTGCGCAATCCTTGTGGGAGCGGGCGTGCCCGCGAACACGGGCGCAGCCCGTGCCAACCACCGCGGTGCCTG‑CTTCGCG‑GGCTcgcc > 1:151499‑M2/1‑146 (MQ=255) tCAGCAGCCACCCGCGGCATGTGCCGATGGTGGGCTGAAAACCGACCTGTTTTCCAGGCGCTTGCGCAATCCTTGTGGGAGCGGGCGTGCCCGCGAACACGGGCGCAGCCCGTGCCAACCACCGCGGTGCCTG‑CTTCGCG‑GGCTcgcccg < 2:639623‑M2/150‑7 (MQ=255) gCATGTGCCGATGGTGGGCTGAAAACCGACCTGTTTTCCAGGCGCTTGCGCAATCCTTGTGGGAGCGGGCGTGCCCGCGAACACGGGCGCAGCCCGTGCCAACCACCGCGGTGCCTG‑CTTCGCG‑GGCTCGCCCGCTCCCACAAGGGATCt > 2:178739/1‑150 (MQ=255) cGATGGTGGGCTGAACCCCGACCTGTTTTCCAGGCGCTTGCGCAATCCTTGTGGGAGCGGGCGTGCCCGCGAACACGGGCGCAGCCCGTGCCAACCACCGCGGTGCCTG‑CTTCGCG‑GGCTCGCCCGCTCCCACAAGGGATCTGCAGCgtc > 2:478017/1‑150 (MQ=255) gATGGTGGGCTGAAAACCGACCTGTTTTCCAGGCGCTTGCGCAATCCTTGTGGGAGCGGGCGTGCCCGCGAACACGGGCGCAGCCCGTGCCAACCACCGCGGTGCCTG‑CTTCGCG‑GGCTCGCCCGCTCCCACAAGGGATCTGCAGCgtca < 1:178739/150‑1 (MQ=255) cTGAAAACCGACCTGTTTTCCAGGCGCTTGCGCAATCCTTGTGGGAGCGGGCGTGCCCGCGAACACGGGCGCAGCCCGTGCCAACCACCGCGGTGCCTG‑CTTCGCG‑GGCTCGCCCGCTCCCACAAGGGATCTGCAGCGTCAGTCAGATgg < 1:525877/150‑1 (MQ=255) cGACCTGTTTTCCAGGCGCTTGCGCAATCCTTGTGGGAGCGGGCGTGCCCGCGAACACGGGCGCAGCCCGTGCCAACCACCGCGGTGCCTG‑CTTCGCG‑GGCTCGCCCGCTCCCACAAGGGATCTGCAGCGTCAGTCAGATGGCGGCAAAc < 1:289082/150‑1 (MQ=255) cTGTTTTCCAGGCGCTTGCGCAATCCTTGTGGGAGCGGGCGTGCCCGCGAACACGGGCGCAGCCCGTGCCAACCACCGCGGTGCCTG‑CTTCGCG‑GGCTCGCCCGCTCCCACAAGGGATCTGCAGCGTCCGTCAGATGGCGGCAAACCGCt > 1:530618/1‑150 (MQ=255) cTTGTGGGAGCGGGCGTGCCCGCGAACACGGGCGCAGCCCGTGCCAACCACCGCGGTGCCTG‑CTTCGCG‑GGCTCGCCCGCTCCCACAAGGGATCTGCAGCGTCAGTCAGATGGCGGCAAACCGCTCATCCAGGTAAGCGATGATTGCCtt < 1:198849/150‑1 (MQ=255) gtgGGAGCGGGCGTGCCCGCGAACACGGGCGCAGCCCGTGCCAACCACCGCGGTGCCTG‑CTTCGCG‑GGCTCGCCCGCTCCCACAAGGGATCTGCAGCGTCAGTCAGATGGCGGCAAACCGCTCATCCAGGTAAGCGATGATTGCCTTGGa < 1:478017/150‑1 (MQ=255) gggggCGCGGGCGTGCCCGCGAACACTTGCGCAGCCCGTGCCAACCACCGCGGTGCCTG‑CTTCGCG‑GGCTCGCCCGCTCCCACAAGGGATCTGCAGCGTCAGTCAGATGGCGGCAAACCGCTCATCCAGGTAAGCGATGATTGCCTTGGa < 2:530618/148‑1 (MQ=255) ggAGCGGGCGTGCCCGCGAACACGGGCGCAGCCCGTGCCAACCACCGCGGTGCCTA‑ATTCGCG‑GGCTCGCCCGTTCCCACAAGGGATCTGCAGCGTCAGTCAGATGGCGGCAAACCGCTCATCCAGGTAAGCGATGATTGCCTTGGACTc > 1:78330/1‑150 (MQ=255) gCGTGCCCGCGAACACGGGCGCAGCCCGTGCCAACCACCGCGGTGCCTG‑CTTCGCG‑GGCTcgcccgctcccacaaggattgcgcaagcgcctggaaaacaggtcggttttcagcccaccatcggcacatgccgcgggtggctgctgaccc < 1:68888‑M2/150‑91 (MQ=255) ccGCGAACACGGGCGCAGCCCGTGCCAACCACCGCGGTGCCTG‑CTTCGCG‑GGCTcgcccgctcccacaaggattgcgcaagcgcctggaaaacaggtcggttttcagcccaccatcggcacatgccgcgggtggctgctgacccgctcca < 1:380283‑M2/150‑97 (MQ=255) ccGCGAACACGGGCGCAGCCCGTGCCAACCACCGCGGTGCCTG‑CTTCGCG‑GGCTcgcccgctcccacaaggattgcgcaagcgcctggaaaacaggtcggttttcagcc > 1:305347‑M2/1‑54 (MQ=255) ccGCGAACACGGGCGCAGCCCGTGCCAACCACCGCGGTGCCTG‑CTTCGCG‑GGCTcgcccgctcccacaaggattgcgcaagcgcctggaaaacaggtcggttttcagcc < 2:305347‑M2/109‑56 (MQ=255) ccGCGAACACGGGCGCAGCCCGTGCCAACCACCGCGGTGCCTG‑CTTCGCG‑GGCTCGCCCGCTCCCACAAGGGATCTGCAGCGTCAGTCAGATGGCGGCAAACCGCTCATCCAGGTAAGCGATGATTGCCTTGGACTCATACATCCAGGTc > 1:394250/1‑150 (MQ=255) gcgAACACGGGCGCAGCCCGTGCCAACACCAGCG‑‑GCATGTCGCCGCTTCGCTCGGCCTCTCCCACAAGGGATCTGCATCGTCAGTCAGATGGCGGCAAACCGCTCATCCAGGTAAGCGATGATTGCCTTGGACTCATACATCCAGGTCAc < 1:624710/150‑1 (MQ=255) cacGGGCGCAGCCCGTGCCAACCACCGCGGTGCCTG‑CTTCGCG‑GGCTcgcccgctcccacaaggattgcgcaagcgcctggaaaacaggtcggttttcagcccaccatcggcacatgccgcgggtggctgctgacccgctccagccaggc < 2:540540‑M2/150‑104 (MQ=255) gggCGCAGCCCGTGCCAACCACCGCGGTGCCTG‑CTTCGCG‑GGCTCGCCCGCTCCCACAAGGGATCTGCAGCgtca > 1:192915/1‑75 (MQ=255) gggCGCAGCCCGTGCCAACCACCGCGGTGCCTG‑CTTCGCG‑GGCTCGCCCGCTCCCACAAGGGATCTGCAGCgtca < 2:192915/75‑1 (MQ=255) ccGTGCCAACCACCGCGGTGCCTG‑CTTCGCG‑GGCTcgcccgctcccacaaggattgcgcaagcgcctggaaaacaggtcggttttcagcccaccatcggcacatgccgcgggtggctgctgacccgctccagccaggcccttaccgccgg > 1:540540‑M2/1‑35 (MQ=255) ccGCGGTGCCTG‑CTTCGCG‑GGCTCGCCCGCTCCCACAAGGGATCTGCAGCGTCAGTCAGATGGCGGCAAACCGCTCATCCAGGTAAGCGATGATTGCCTTGGACTCATACATCCAGGTCACCTTGCCGGCTTCTTCAATGCGCAGGCATg > 1:380864/1‑150 (MQ=255) | GCGGGTCAGCAGCCACCCGCGGCATGTGCCGATGGTGGGCTGAAAACCGACCTGTTTTCCAGGCGCTTGCGCAATCCTTGTGGGAGCGGGCGTGCCCGCGAACACGGGCGCAGCCCGTGCCAACCACCGCGGTGCCTG‑CTTCGCG‑GGCTCGCCCGCTCCCACAAGGGATCTGCAGCGTCAGTCAGATGGCGGCAAACCGCTCATCCAGGTAAGCGATGATTGCCTTGGACTCATACATCCAGGTCACCTTGCCGGCTTCTTCAATGCGCAGGCATG > NC_002947/2048762‑2049037 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |