Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 2,385,836 Δ1 bp 5.8% coding (85/576 nt) PP_2093 ← two‑component system response regulator NasT

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029472,385,8360T. 5.8% 325.4 / 13.3 104coding (85/576 nt)PP_2093two‑component system response regulator NasT
Reads supporting (aligned to +/- strand):  ref base T (53/45);  new base . (3/3);  total (56/48)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.54e-01

Only 100 of 113 total aligned reads displayed.

AACACGATGGGCCGCGGCTGGTCACGGCTGACCAGCACTACCTGTTCCATCACATCGCGGTCTGGCGAGTCGGTATCGATCAGCACCACGTCCGGGCGCACCGTTTCGACGCAGGCGGGCAGGTCGATGGTCAGGTCTGGGGCTTCGATGATCTCGAAGCCGGCCTCACTCAACGCAGCCCTCAGGCGACCGAGCTTGCTCTGGGTGTCGTCGATCAGCAGGATGCGCAACATGTTCGTCCCCCTCACGCGCCGACACGGGCATCGGGCAACTCGCCCAAGGCATGCAAGCTGAAAC  >  NC_002947/2385688‑2385984
                                                                                                                                                    |                                                                                                                                                     
aacaCGATGGGCCGCGGCTGGTCACGGCTGACCAGCACTACCTGTTCCATCACATCGCGGTCTGGCGAGTCGGTATCGATCAGCACCACGTCCGGGCGCACCGTTTCGACGCAGGCGGGCAGGTCGATGGTCAGGTCTGGGGCTTCgatg                                                                                                                                                      >  1:1529180/1‑150 (MQ=255)
 acacGATGGGCCGCGGCTGGTCACGGCTGACCAGCACTACCTGTTCCATCACATCGCGGTCTGGCGAGTCGGTATAGATCAGCACCACGTCCGGGCGCACCGTTTCGACGCAGGCGGGCAGGTCGATGGTCAGGTCTGGGGCTTCgatga                                                                                                                                                     >  2:2250354/1‑150 (MQ=255)
     gATGGGCCGCGGCTGGTCACGGCTGACCAGCACTACCTGTTCCATCACATCGCGGTCTGGCGAGTCGGTATCGATCAGCACCACGTCCGGGCGCACCGTTTCGACGCAGGCGGGCAGGTCGATGGTCAGGTCTGGGGCTTCGATGAtctc                                                                                                                                                <  1:2181283/150‑1 (MQ=255)
        gggCCGCGGCTGGTCACGGCTGACCAGCACTACCTGTTCCATCACATCGCGGTCTGGCGAGTCGGTATCGATCAGCACCACGTCCGGGCGCACCGTTTCGACGCAGGCGGGCAGGTCGATGGTCAGGTCTGGGGCTTCGATGATCTCGaa                                                                                                                                             <  1:405501/150‑1 (MQ=255)
            cgcgGCTGGTCACGGCTGACCAGCACTACCTGTTCCATCACATCGCGGTCTGGCGAGTCGGTATCGATCAGCACCACGTCCGGGCGCACCGTTTCGACGCAGGCGGGCAGGTCGATGGTCAGGTCTGGGGCTTCGAGATCATCGAAGccc                                                                                                                                         <  2:1990554/150‑2 (MQ=255)
                    gTCACGGCTGACCAGCACTACCTGTTCCATCACATCGCGGTCTGGCGAGTCGGTATCGATCAGCACCACGTCCGGGCGCACCGTTTCGACGCAGGCGGGCAGGTCGATGGTCAGGTCTGGGGCTTCGATGATCTCGAAGCCGGCctcact                                                                                                                                 >  2:1515366/1‑150 (MQ=255)
                     tCACGGCTGACCAGCACTACCTGTTCCATCACATCGCGGTCTGGCGAGTCGGTATCGATCAGCACCACGTCCGGGCGCACCGTTTCGACGCAGGCGGGCAGGTCGATGGTCAGGTCTGGGGCTTCGATGATCTCGAAGCCGGCctcactc                                                                                                                                >  2:855584/1‑150 (MQ=255)
                         ggCTGACCAGCACTACCTGTTCCATCACATCGCGGTCTGGCGAGTCGGTATCGATCAGCACCACGTCCGGGCGCACCGTTTCGACGCAGGCGGGCAGGTCGATGGTCAGGTCTGGGGCTTCGATGATCTCGAAGCCGGCCTCACTCAACg                                                                                                                            >  1:844226/1‑150 (MQ=255)
                            tGACCAGCACTACCTGTTCCATCACATCGCGGTCTGGCGAGTCGGTATCGATCAGCACCACGTCCGGGCGCACCGTTTCGACGCAGGCGGGCAGGTCGATGGTCAGGTCTGGGGCTTCGATGATCTCGAAGCCGGCCTCACTCAACGCAg                                                                                                                         >  2:1038351/1‑150 (MQ=255)
                            tGACCAGCACTACCTGTTCCATCACATCGCGGTCTGGCGAGTCGGTATCGATCAGCACCACGTCCGGGCGCACCGTTTCGACGCAGGCGGGCAGGTCGATGGTCAGGTCTGGGGCTTCGATGATCTCGAAGCCGGCCTCACTCAACGCAg                                                                                                                         <  1:990664/150‑1 (MQ=255)
                              aCCAGCACTACCTGTTCCATCACATCGCGGTCTGGCGAGTCGGTATCGATCAGCACCACGTCCGGGCGCACCGTTTCGACGCAGGCGGGCAGGTCGATGGTCAGGTCTGGGGCTTCGATGATCTCGAAGCCGGCCTCACTCAACGCAGcc                                                                                                                       <  1:1617483/150‑1 (MQ=255)
                              aCCAGCACTACCTGTTCCATCACATCGCGGTCTGGCGAGTCGGTATCGATCAGCACCACGTCCGGGCGCACCGTTTCGACGCAGGCGGGCAGGTCGATGGTCAGGTCTGGGGCTTCGATGATCTCGAAGCCGGCCTCACTCAACGCAGcc                                                                                                                       >  2:2387764/1‑150 (MQ=255)
                                  gCACTACCTGTTCCATCACATCGCGGTCTGGCGAGTCGGTATCGATCAGCACCACGTCCGGGCGCACCGTTTCGACGCAGGCGGGCAGGTCGATGGTCAGGTCTGGGGCTTCGATGATCTCGAAGCCGGCCTCACTCAACGCAGCCCTCa                                                                                                                   >  2:1780680/1‑150 (MQ=255)
                                   cACTACCTGTTCCATCACATCGCGGTCTGGCGAGTCGGTATCGATCAGCACCACGTCCGGGCGCACCGTTTCGACGCAGGCGGGCAGGTCGATGGTCAGGTCTGGGGCTTCGATGATCTCGAAGCCGGCCTCACTCAACGCAGCCCTCAg                                                                                                                  <  2:844226/150‑1 (MQ=255)
                                   cACTACCTGTTCCATCACATCGCGGTCTGGCGAGTCGGTATCGATCAGCACCACGTCCGGGCGCACCGTTTCGACGCAGGCGGGCAGGTCGATGGTCAGGTCTGGAGCTTCGATGATCTCGAAGCCGGCCTCACTCAACGCAGCCCtgcg                                                                                                                  >  1:2209963/1‑147 (MQ=255)
                                    aCTACCTGTTCCATCACATCGCGGTCTGGCGAGTCGGTATCGATCAGCACCACGTCCGGGCGCACCGTTTCGACGCAGGCGGGCAGGTCGATGGTCAGGTCTGGGGCTTCGATGATCTCGAAGCCGGCCTCACTCAACGCAGCCCTCAgg                                                                                                                 <  1:1368512/150‑1 (MQ=255)
                                    aCTACCTGTTCCATCACATCGCGGTCTGGCGAGTCGGTATCGATCAGCACCACGTCCGGGCGCACCGTTTCGACGCAGGCGGGCAGGTCGATGGTCAGGTCTGGGGCTTCGATGATCTCGAAGCCGGCCTCACTCAACGCAGCCCTCAgg                                                                                                                 <  2:1538502/150‑1 (MQ=255)
                                        ccTGTTCCATCACATCGCGGTCTGGCGAGTCGGTATCGATCAGCACCACGTCCGGGCGCACCGTTTCGACGCAGGCGGGCAGGTCGATGGTCAGGTCTGGGGCTTCGATGATCTCGAAGCCGGCCTCACTCAACGCAGcc                                                                                                                       <  2:1313632/140‑1 (MQ=255)
                                        ccTGTTCCATCACATCGCGGTCTGGCGAGTCGGTATCGATCAGCACCACGTCCGGGCGCACCGTTTCGACGCAGGCGGGCAGGTCGATGGTCAGGTCTGGGGCTTCGATGATCTCGAAGCCGGCCTCACTCAACGCAGcc                                                                                                                       >  1:1313632/1‑140 (MQ=255)
                                        ccTGTTCCATCACATCGCGGTCTGGCGAGTCGGTATCGATCAGCACCACGTCCGGGCGCACCGTTTCGACGCAGGCGGGCAGGTCGATGGTCAGGTCTGGGGCTTCGATGATCTCGAAGCCGGCCTCACTCAACGCAGCCCTCAGGCGAc                                                                                                             >  1:375075/1‑150 (MQ=255)
                                         cTGTTCCATCACATCGCGGTCTGGCGAGTCGGTATCGATCAGCACCACGTCCGGGCGCACCGTTTCGACGCAGGCGGGCAGGTCGATGGTCAGGTCTGGGGCTTCGATGATCTCGAAGCCGGCCTCACTCAACGCAGCCCTCAGGCGAcc                                                                                                            <  2:1415958/150‑1 (MQ=255)
                                               gaTCACATCGCGGTCTGGCGAGTCGGTATCGATCAGCACCACGTCCGGGCGCACCGTTTCGACGCAGGCGGGCAGGTCGATGGTCAGGTCTGGGGCTTCGATGATCTCGAAGCCGGCCTCACTCAACGCAGCCCTCAGGCGACCGAGCtt                                                                                                      >  2:1648911/2‑150 (MQ=255)
                                                aTCACATCGCGGTCTGGCGAGTCGGTATCGATCAGCACCACGTCCGGGCGCACCGTTTCGACGCAGGCGGGCAGGTCGATGGTCAGGTCTGGGGCTTCGATGATCTCGAAGCCGGCCTCACTCAACGCAGCCCTCAGGCGACCGAGCTTg                                                                                                     >  2:1928898/1‑150 (MQ=255)
                                                aTCACATCGCGGTCTGGCGAGTCGGTATCGATCAGCACCACGTCCGGGCGCACCGTTTCGACGCAGGCGGGCAGGTCGATGGTCAGGTCTGGGGCTTCGATGATCTCGAAGCCGGCCTCACTCAACGCAGCCCTCAGGCGACCGAGCTTg                                                                                                     >  1:1089641/1‑150 (MQ=255)
                                                aTCACATCGCGGTCTGGCGAGTCGGTATCGATCAGCACCACGTCCGGGCGCACCGTTTCGACGCAGGCGGGCAGGTCGATGGTCAGGTCTGGGGCTTCGATGATCTCGAAGCCGGCCTCACTCAACGCAGCCCTCAGGCGACCGAGCTTg                                                                                                     >  1:1417418/1‑150 (MQ=255)
                                                 tCACATCGCGGTCTGGCGAGTCGGTATCGATCAGCACCACGTCCGGGCGCACCGTTTCGACGCAGGCGGGCAGGTCGATGGTCAGGTCTGGGGCTTCGATGATCTCGAAGCCGGCCTCACTCAACGCAGCCCTCAGGCGACCGAGCTTGc                                                                                                    >  2:728954/1‑150 (MQ=255)
                                                 tCACATCGCGGTCTGGCGAGTCGGTATCGATCAGCACCACGTCCGGGCGCACCGTTTCGACGCAGGCGGGCAGGTCGATGGTCAGGTCTGGGGCTTCGATGATCTCGAAGCCGGCCTCACTCAACGCAGCCCTCAGGCGACCGAGCTTGc                                                                                                    <  1:1515366/150‑1 (MQ=255)
                                                   acaTCGCGGTCTGGCGAGTCGGTATCGATCAGCACCACGTCCGGGCGCACCGTTTCGACGCAGGCGGGCAGGTCGATGGTCAGGTCTGGGGCTTCGATGATCTCGAAGcc                                                                                                                                          <  2:846814/110‑1 (MQ=255)
                                                   acaTCGCGGTCTGGCGAGTCGGTATCGATCAGCACCACGTCCGGGCGCACCGTTTCGACGCAGGCGGGCAGGTCGATGGTCAGGTCTGGGGCTTCGATGATCTCGAAGcc                                                                                                                                          >  1:846814/1‑110 (MQ=255)
                                                     aTCGCGGTCTGGCGAGTCGGTATCGATCAGCACCACGTCCGGGCGCACCGTTTCGACGCAGGCGGGCAGGTCGATGGTCAGGTCTGGGGCTTCGATGATCTCGAAGCCGGCCTCACTCAACGCAGCCCTCAGGCGACCGAGCTTGCTCTg                                                                                                >  1:1338069/1‑150 (MQ=255)
                                                     aTCGCGGTCTGGCGAGTCGGTATCGATCAGCACCACGTCCGGGCGCACCGTTTCGACGCAGGCGGGCAGGTCGATGGTCAGGTCTGGGGCTTCGATGATCTCGAAGCCGGCCTCACTCAACGCAGCCCTCAGGCGACCGAGCTTGCTCTg                                                                                                >  1:1090448/1‑150 (MQ=255)
                                                      tCGCGGTCTGGCGAGTCGGTATCGATCAGCACCACGTCCGGGCGCACCGTTTCGACGCAGGCGGGCAGGTCGATGGTCAGGTCTGGGGCTTCGATGATCTCGAAGCCGGCCTCACTCAACGCAGCCCTCAGGCGACCGAGCTTGCTCTgg                                                                                               >  2:112908/1‑150 (MQ=255)
                                                      tCGCGGTCTGGCGAGTCGGTATCGATCAGCACCACGTCCGGGCGCACCGTTTCGACGCAGGCGGGCAGGTCGATGGTCAGGTCTGGGGCTTCGATGATCTCGAAGCCGGCCTCACTCAACGCAGCCCTCAGGCGACCGAGCTTGCTCTgg                                                                                               <  2:120433/150‑1 (MQ=255)
                                                      tCGCGGTCTGGCGAGTCGGTATCGATCAGCACCACGTCCGGGCGCACCGTTTCGACGCAGGCGGGCAGGTCGATGGTCAGGTCTGGGGCTTCGATGATCTCGAAGCCGGCCTCACTCAACGCAGCCCTCAGGCGACCGAGCTTGCTCTgg                                                                                               <  2:1090448/150‑1 (MQ=255)
                                                      tCGCGGTCTGGCGAGTCGGTATCGATCAGCACCACGTCCGGGCGCACCGTTTCGACGCAGGCGGGCAGGTCGATGGTCAGGTCTGGGGCTTCGATGATCTCGAAGCCGGCCTCACTCAACGCAGCCCTCAGGCGACCGAGCTTGCTCTgg                                                                                               <  1:855584/150‑1 (MQ=255)
                                                              tGGCGAGTCGGTATCGATCAGCACCACGTCCGGGCGCACCGTTTCGACGCAGGCGGGCAGGTCGATGGTCAGGTCTGGGGCTTCGATGATCTCGAAGCCGGCCTCACTCAACGCAGCCCTCAGGCGACCGAGCTTGCTCTGGGTgtcgtc                                                                                       <  2:1417418/150‑1 (MQ=255)
                                                                gCGAGTCGGTATCGATCAGCACCACGTCCGGGCGCACCGTTTCGACGCAGGCGGGCAGGTCGATGGTCAGGTCTGGGGCTTCGATGATCTCGAAGCCGGCCTCACTCAAc                                                                                                                             <  2:1483174/110‑1 (MQ=255)
                                                                     tCGGTATCGATCAGCACCACGTCCGGGCGCACCGTTTCGACGCAGGCGGGCAGGTCGATGGTCAGGTCTGGGGCTTCGATGATCTCGAAGCCGGCCTCACTCAACGCAGCCCTCAGGCGACCGAGCTTGCTCTGGGTTTCGTCGATcagt                                                                                <  2:2404608/150‑2 (MQ=255)
                                                                     tCGGTATCGATCAGCACCACGTCCGGGCGCACCGTTTCGACGCAGGCGGGCAGGTCGATGGTCAGGTCTGGGGCTTCGATGATCTCGAAGCCGGCCTCACTCAACGCAGCCCTCAGGCGACCGAGCTTGCTCTGGGTGTCGTCGATcagc                                                                                >  2:315660/1‑150 (MQ=255)
                                                                      cGGTATCGATCAGCACCACGTCCGGGCGCACCGTTTCGACGCAGGCGGGCAGGTCGATGGTCAGGTCTGGGGCTTCGATGATCTCGAAGCCGGCCTCACTCAACGCAGCCCTCAGGCGACCGAGCTTGCTCTGGGTGTCGTCGATcagca                                                                               <  1:1602758/150‑1 (MQ=255)
                                                                      cGGTATCGATCAGCACCACGTCCGGGCGCACCGTTTCGACGCAGGCGGGCAGGTCGATGGTCAGGTCTGGGGCTTCGATGATCTCGAAGCCGGCCTCACTCAACGCAGCCCTCAGGCGACCGAGCTTGCTCTGGGTGTCGTCGATcagca                                                                               <  1:788560/150‑1 (MQ=255)
                                                                        gTATCGATCAGCACCACGTCCGGGCGCACCGTTTCGACGCAGGCGGGCAGGTCGATGGTCAGGTCTGGGGCTTCGATGATCTCGAAGCCGGCCTCACTCAACGCAGCCCTCAGGCGACCGAGCTTGCTCTGGGTGTCGTCGATCAGCAgg                                                                             >  2:2341164/1‑150 (MQ=255)
                                                                          aTCGATCAGCACCACGTCCGGGCGCACCGTTTCGACGCAGGCGGGCAGGTCGATGGTCAGGTCTGGGGCTTCGAGATCATCGAAg                                                                                                                                            >  2:35805/1‑85 (MQ=255)
                                                                          aTCGATCAGCACCACGTCCGGGCGCACCGTTTCGACGCAGGCGGGCAGGTCGATGGTCAGGTCTGGGGCTTCGAGATCATCGAAg                                                                                                                                            <  1:35805/85‑1 (MQ=255)
                                                                            cGATCAGCACCACGTCCGGGCGCACCGTTTCGACGCAGGCGGGCAGGTCGATGGTCAGGTCTGGGGCTTCGATGATCTCGAAGCCGGCCTCACTCAACGCAGCCCTCAGGCGACCGAGCTTGCTCTGGGTGTCGTCGATCAGCAGGATgc                                                                         <  2:1257226/150‑1 (MQ=255)
                                                                             gATCAGCACCACGTCCGGGCGCACCGTTTCGACGCAGGCGGGCAGGTCGATGGTCAGGTCTGGGGCTTCGATGATCTCGAAGCCGGCCTCACTCAACGCAGCCCTCAGGCGACCGAGCTTGCTCTggg                                                                                              >  2:2197522/1‑128 (MQ=255)
                                                                             gATCAGCACCACGTCCGGGCGCACCGTTTCGACGCAGGCGGGCAGGTCGATGGTCAGGTCTGGGGCTTCGATGATCTCGAAGCCGGCCTCACTCAACGCAGCCCTCAGGCGACCGAGCTTGCTCTggg                                                                                              <  1:2197522/128‑1 (MQ=255)
                                                                              aTCAGCACCACGTCCGGGCGCACCGTTTCGACGCAGGCGGGCAGGTCGATGGTCAGGTCTGGGGCTTCGATGATCTCGATGCCGGCCTCACTCAACGCAGCCCTCAGGCGACCGAGCTTGCTCTGGGTGTCGTCGATCAGCAGGATgcgc                                                                       >  1:2338080/1‑150 (MQ=255)
                                                                                tggCACCACGTCCGGGCGCACCGTTTCGACGCAGGCGGGCAGGTCGATGGTCAGGTCTGGGGCTTCGATGATCTCGAAGCCGGCCTCACTCAACGCAGCCCTCAGGCGACCGAGCTTGCTCTGGGTGTCGTCGATCAGCAGGa                                                                            >  2:799934/3‑143 (MQ=255)
                                                                                tggCACCACGTCCGGGCGCACCGTTTCGACGCAGGCGGGCAGGTCGATGGTCAGGTCTGGGGCTTCGATGATCTCGAAGCCGGCCTCACTCAACGCAGCCCTCAGGCGACCGAGCTTGCTCTGGGTGTCGTCGATCAGCAGGa                                                                            <  1:799934/141‑1 (MQ=255)
                                                                                  gCACCACGTCCGGGCGCACCGTTTCGACGCAGGCGGGCAGGTCGATGGTCAGGTCTGGGGCTTCGATGATCTCGAAGCCGGCCTCACTCAACGCAGCCCTCAGGCGACCGAGCTTGCTCTg                                                                                                >  1:1754728/1‑121 (MQ=255)
                                                                                  gCACCACGTCCGGGCGCACCGTTTCGACGCAGGCGGGCAGGTCGATGGTCAGGTCTGGGGCTTCGATGATCTCGAAGCCGGCCTCACTCAACGCAGCCCTCAGGCGACCGAGCTTGCTCTg                                                                                                <  2:1754728/121‑1 (MQ=255)
                                                                                     ccacGTCCGGGCGCACCGTTTCGACGCAGGCGGGCAGGTCGATGGTCAGGTCTGGGGCTTCgatgat                                                                                                                                                    <  2:855459/67‑1 (MQ=255)
                                                                                     ccacGTCCGGGCGCACCGTTTCGACGCAGGCGGGCAGGTCGATGGTCAGGTCTGGGGCTTCgatgat                                                                                                                                                    >  1:855459/1‑67 (MQ=255)
                                                                                     ccacGTCCGGGCGCACCGTTTCGACGCAGGCGGGCAGGTCGATGGTCAGGTCTGGGGCTTCGATGATCTCGAAGCCGGCCTCACTCAACGCAGCCCTCAGGCGACCGAGCTTGCTCTgg                                                                                               <  2:2021360/119‑1 (MQ=255)
                                                                                     ccacGTCCGGGCGCACCGTTTCGACGCAGGCGGGCAGGTCGATGGTCAGGTCTGGGGCTTCGATGATCTCGAAGCCGGCCTCACTCAACGCAGCCCTCAGGCGACCGAGCTTGCTCTgg                                                                                               >  1:2021360/1‑119 (MQ=255)
                                                                                     ccacGTCCGGGCGCACCCTTTCGACGCAGGCGGGCAGGTCGTTCGTCAGGTCTGGGGCTTCGATGATCTCGAAGCCGGCCTCACTCAACGCAGCCCTCAGGCGACCGAGCTTGCTCTGGGTGTCGTCGATCAGCAGGATGCGCAACATGt                                                                <  1:1052785/150‑1 (MQ=255)
                                                                                      cacGTCCGGGCGCACCGTTTCGACGCAGGCGGGCAGGTCGATGGTCAGGTCTGGGGCTTCGATGATCTCGAAGCCGGCCTCACTCAACGCAGCCCTCAGGCGACCGAGCTTGCTCTGGGTGTCGTCGATCAGCAGGATGCGCAACATGtt                                                               >  2:2367559/1‑150 (MQ=255)
                                                                                      cacGTCCGGGCGCACCGTTTCGACGCAGGCGGGCAGGTCGATGGTCAGGTCTGGGGCTTCGATGATCTCGAAGCCGGCCACACTCAACGCAGCCCTCAGGCGACCGAGCTTGCTCACGGTCTCGTCGATCAGCAGGATGCGCAACATGtt                                                               >  1:43479/1‑150 (MQ=255)
                                                                                      cacGTCCGGGCGCACCGTTTCGACGCAGGCGGGCAGGTCGATGGTCAGGTCTGGGGCTTCGATGATCTCGAAGCCAGCCTCACTCAACGCAGCCCTCAGGCGACCGAGCTTGCTCTGGGTGTCGTCGATCAGCAGGATGCGCAACATGtt                                                               >  1:343385/1‑150 (MQ=255)
                                                                                       acGTCCGGGCGCACCGTTTCGACGCAGGCGGGCAGGTCGATGGTCAGGTCTGGGGCTTCGATGATCTCGAAGCCGGCCTCACTCAACGCAGCCCTCAGGCGACCGAGCTTGCTCTGGGTGTCGTCGATCAGCAGGATGCGCAACATGTTc                                                              >  1:1167602/1‑150 (MQ=255)
                                                                                       acGTCCGGGCGCACCGTTTCGACGCAGGCGGGCAGGTCGATGGTCAGGTCTGGGGCTTCGATGATCTCGAAGCCGGCCTCACTCAACGCAGCCCTCAGGCGACCGAGCTTGCTCTGGGTGTCGTCGATCAGCAGGATGCGCAACATGTTc                                                              <  1:112908/150‑1 (MQ=255)
                                                                                         gTCCGGGCGCACCGTTTCGACGCAGGCGGGCAGGTCGATGGTCAGGTCTGGGGCTTCGATGATCTCGAAGCCGGCCTCACTCAACGCAGCCCTCAGGCGACCGAGCTTGCTCTgg                                                                                               <  2:1092533/115‑1 (MQ=255)
                                                                                         gTCCGGGCGCACCGTTTCGACGCAGGCGGGCAGGTCGATGGTCAGGTCTGGGGCTTCGATGATCTCGAAGCCGGCCTCACTCAACGCAGCCCTCAGGCGACCGAGCTTGCTCTgg                                                                                               >  1:1092533/1‑115 (MQ=255)
                                                                                          tCCGGGCGCACCGTTTCGACGCAGGCGGGCAGGTCGATGGTCAGGTCTGGGGCTTCGATGATCTCGAAGCCGGCCTCACTCAACGCAGCCCTCAGGCGACCGAGCTTGCTCTgg                                                                                               >  1:1337379/1‑114 (MQ=255)
                                                                                          tCCGGGCGCACCGTTTCGACGCAGGCGGGCAGGTCGATGGTCAGGTCTGGGGCTTCGATGATCTCGAAGCCGGCCTCACTCAACGCAGCCCTCAGGCGACCGAGCTTGCTCTgg                                                                                               <  2:1337379/114‑1 (MQ=255)
                                                                                          tCCGGGCGCACCGTTTCGACGCAGGCGGGCAGGTCGATGGTCAGGTCTGGGGCTTCGATGATCTCGAAGCCGGCCTCACTCAACGCAGCCCTCAGGCGACCGAGCTTGCTCTGGGTGTCGTCGATCAGCAGGATGCGCAACATGTTCGTc                                                           <  2:1529180/150‑1 (MQ=255)
                                                                                            cGGGCGCACCGTTTCGACGCAGGCGGGCAGGTCGATGGTCAGGTCTGGGGCTTCGATGATCTCGAAGCCGGCCTCACTCAACGCAGCCCTCAGGCGACCGAGCTTGCTCTGGGTGTCGTCGATca                                                                                  >  1:1082184/1‑125 (MQ=255)
                                                                                            cGGGCGCACCGTTTCGACGCAGGCGGGCAGGTCGATGGTCAGGTCTGGGGCTTCGATGATCTCGAAGCCGGCCTCACTCAACGCAGCCCTCAGGCGACCGAGCTTGCTCTGGGTGTCGTCGATca                                                                                  <  2:1082184/125‑1 (MQ=255)
                                                                                              ggCGCACCGTTTCGACGCAGGCGGGCAGGTCGATGGTCAGGTCTGGGGCTTCGATGATCTCGAAGCCGGCCTCACTCAACGCAGCCCTCAGGCGACCGAGCTTGCTCTGGGTGTCGTCGATCAGCAGGATGCGCAACATGTTCGTccccc                                                       <  1:728954/150‑1 (MQ=255)
                                                                                                 gcACCGTTTCGACGCAGGCGGGCAGGTCGATGGTCAGGTCTGGGGCTTCGATGATCTCGAAGCTGGCCTCACTCAACGCAGCCCTCAGGCGACCGAGCTTGCTCTGGGTGTCGTCGATCAGCAGGATGCGCAACATGTTCGTCCCCCTCa                                                    >  1:1008274/1‑150 (MQ=255)
                                                                                                 gcACCGTTTCGACGCAGGCGGGCAGGTCGATGGTCAGGTCTGGGGCTTCGATGATCTCGAAGCCGGCCTCACTCAACGCAGCCCTCAGGCGACCGAGCTTGCTCTgg                                                                                               >  1:534962/1‑107 (MQ=255)
                                                                                                 gcACCGTTTCGACGCAGGCGGGCAGGTCGATGGTCAGGTCTGGGGCTTCGATGATCTCGAAGCCGGCCTCACTCAACGCAGCCCTCAGGCGACCGAGCTTGCTCTgg                                                                                               <  2:534962/107‑1 (MQ=255)
                                                                                                 gcACCGTTTCGACGCAGGCGGGCAGGTCGATGGTCAGGTCTGGGGCTTCGATGATCTCGAAGCCGGCCTCACTCAACGCAGCCCTCAGGCGACCGAGCTTGCTCTGGGTGTCGTCGATCAGCAGGATGCGCAACATGTTCGTCCCCCTCa                                                    >  2:1636756/1‑150 (MQ=255)
                                                                                                  cACCGTTTCGACGCAGGCGGGCAGGTCGATGGTCAGGTCTGGGGCTTCGATGATCTCGAAGCCgg                                                                                                                                        <  2:1303135/65‑1 (MQ=255)
                                                                                                  cACCGTTTCGACGCAGGCGGGCAGGTCGATGGTCAGGTCTGGGGCTTCGATGATCTCGAAGCCgg                                                                                                                                        >  1:1303135/1‑65 (MQ=255)
                                                                                                  cACCGTTTCGACGCAGGCGGGCAGGTCGATGGTCAGGTCTGGGGCTTCGATGATCTCGAAGCCGGCCTCACTCAACGCAGCCCTCAGGCGACCGAGCTTGCTCTGGGTGTCGTCGATCAGCAGGATGCGCAACATGTTCGTCCCCCTCAc                                                   >  2:787986/1‑150 (MQ=255)
                                                                                                   aCCGTTTCGACGCAGGCGGGCAGGTCGATGGTCAGGTCTGGGGCTTCGATGATCTCGAAGCCGGCCTCACTCAACGCAGCCCTCAGGCTACCGAGCTTGCTCTGGGTGTCGTCGATCAGCAGGATGCGCAACATGTTCGTCCCCCTCAcg                                                  >  2:1695420/1‑150 (MQ=255)
                                                                                                    ccGTTTCGACGCAGGCGGGCAGGTCGATGGTCAGGTCTGGGGCTTCGATGATCTCGAAGCCGGCCTCACTCAACGCAGCCCTCAGGCGACCGAGCTTGCTCTGGGTGTCGTCGATCAGCAGGATGCGCAACATGTTCGTCCCCCTCAcgc                                                 <  2:1338069/150‑1 (MQ=255)
                                                                                                           gACGCAGGCGGGCAGGTCGATGGTCAGGTCTGGGGCTTCGATGATCTCGAAGCCGGCCTCACTCAACGCAGCCCTCAGGCGACCGAGCTTGCTCTGGGTGTCGTCGATCAGCAGGATGCGCAACATGTTCGTCCCCCTCACGCGCCGaca                                          >  1:1526958/1‑150 (MQ=255)
                                                                                                              gCAGGCGGGCAGGTCGATGGTCAGGTCTGGGGCTTCGATGATCTCGAAGCTGGCCTCACTCAACGCAGCCCTCAGGCGACCGAGCTTGCTCTGGGTGTCGTCGATCAGCAGGATGCGCAACATGTTCGTCCCCCTCACGCGCCGACACgg                                       <  2:1008274/150‑1 (MQ=255)
                                                                                                                     ggCGGGTAGATGGTCAGGTCTGGGGCTTCGATGATCTCGAAGCCGGCCTCACTCAACGCAGCCCTGGGACGACCGGGCGTGCTCTGGGTGTCGTCGATCAGCAGGATGCGCAACATGTTCGTCCCCCTCACGCGCCGACACGGGCATCgg                                <  2:687758/150‑1 (MQ=255)
                                                                                                                      gCAGGTCGATGGTCAGGTCTGGGGCTTCGATGATCTCGAAGCCGGCCTCACTCAACGCAGCCCTCAGGCGACCGAGCTTGCTCTGGGTGTCGTCGATCAGCAGGATGCGCAACATGTTCGTCCCCCTCACGCGCCGACACGGGCATCggg                               >  2:2052485/1‑150 (MQ=255)
                                                                                                                      gCAGGTCGATGGTCAGGTCTGGGGCTTCGATGATCTCGAAGCCGGCCTCACTCAACGCAGCCCTCAGGCGACCGAGCTTGCTCTGGGTGTCGTCGATCAGCAGGATGCGCAACATGTTCGTCCCCCTCACGCGCCGACACGGGCATCggg                               >  1:1300533/1‑150 (MQ=255)
                                                                                                                          gTCGATGGTCAGGTCTGGGGCTTCGATGATCTCGAAGCCGGCCTCACTCAACGCAGCCCTCAGGCGACCGAGCTTGCTCTGGGTgtcgtc                                                                                       >  2:2282077/1‑90 (MQ=255)
                                                                                                                          gTCGATGGTCAGGTCTGGGGCTTCGATGATCTCGAAGCCGGCCTCACTCAACGCAGCCCTCAGGCGACCGAGCTTGCTCTGGGTgtcgtc                                                                                       <  1:2282077/90‑1 (MQ=255)
                                                                                                                            tgagggTAAGGTCTGGGGCGTCGCTGATCTCGAAGCCAGCCTCACGCAACGCAGCCCGCAGGCGACCGAGCTTGCTCTGGGTGTCGTCGATCAGCAGGCGGCGTAACATGTTCGTCCCCCTCACGCGCCGACACGGGCATCGGGCAACTc                         <  2:343385/146‑1 (MQ=255)
                                                                                                                            cGATGGTCAGGTCTGGGGCTTCGATGATCTCGAAGCCGGCATCGCCGGTGTCATCCGTCAGGCGTCCGAGCTTGCTCTTTGTGTCGTCGATCAGCAGGATGCGCAACATGTTCGTCCCCCTCACGCGCCGACACGGGCATCGGGCAACTc                         <  1:1740334/150‑1 (MQ=255)
                                                                                                                             gATGGTCAGGTCTGGGGCTTCGATGATCTCGAAGCCGGCCTCACTCAACGCAGCCCTCAGGCGACCGAGCTTGCTCTGGGTGTCGTCGATCAGCAGGATGCGCAACATGTTCGTCCCCCTCACGCGCCGACACggg                                      >  2:641146/1‑136 (MQ=255)
                                                                                                                             gATGGTCAGGTCTGGGGCTTCGATGATCTCGAAGCCGGCCTCACTCAACGCAGCCCTCAGGCGACCGAGCTTGCTCTGGGTGTCGTCGATCAGCAGGATGCGCAACATGTTCGTCCCCCTCACGCGCCGACACggg                                      <  1:641146/136‑1 (MQ=255)
                                                                                                                                  tCAGGGCTGGGTCTTCGATGATCTCGAAGCCGGCCTCACTCAACGCAGCCCTCAGGCGACCGAGCTTGCTCTGGGTGTCGTCGATCAGCAGGATGCGCAACATGTTCGTCCCCCTCACGCGCCGACACGGGCATCGGGCAACTCGCCCaa                   >  2:1610379/1‑150 (MQ=255)
                                                                                                                                       tCTGGGGCTTCGATGATCTCGAAGCCGGCCTCACTCAACGCAGCCCTCAGGCGACCGAGCTTGCTCTGGGTGTCGTCGATCAGCAGGATGCGCAACATGTTCGTCCCCCTCACGCGCCGACACGGGCATCGGGCACCTCGACCAAGGCAt              <  2:1300533/150‑1 (MQ=255)
                                                                                                                                       tCTGGGGCTTCGATGATCTCGAAGCCGGCCTCACTCAACGCAGCCCTCAGGAGACCGAGCTTGCTCTGGGTGTCGTCGATCAGCAGGATGCGCAACATGTTCGTCCCCCTCACGCGCCGACACGGGCATCGGGCAACTCGCCCAAGGCAt              <  2:2338080/150‑1 (MQ=255)
                                                                                                                                       aggccggCTTCGAGATCATCGAAGCCGGCCTCACTCAACGCAGCCCTCAGGCGACCGAGCTTGCTCTGGGTGTCGTCGATCAGCAGGATGCGCAACATGTTCGTCCCCCTCACGCGCCGACACGGGCATCGGGCAACTCGCCCAAGGCAt              <  2:352758/145‑1 (MQ=255)
                                                                                                                                          ccggCTTCGAGATCATCGAAGCCGGCCTCACTCAACGCAGCCCTCAGGCGACCGAGCTTGCTCTGGGTGTCGTCGATCAGCAGGATGCGCAACATGTTCGTCCCCCTCACGCGCCGACACGGGCATCGGGCAACTCGCCCAAGGCATGCa           >  2:1567780/3‑150 (MQ=255)
                                                                                                                                           cggCTTCGAGATCATCGAAGCCGGCCTCACTCAACGCAGCCCTCAGGCGACCGAGCTTGCTCTGGGTGTCGTCGATCAGCAGGATGCGCAACATGTTCGTCCCCCTCACGCGCCGACACGGGCATCGGGCAACTCGCCCTAGGCATGCaa          >  1:2174158/2‑150 (MQ=255)
                                                                                                                                               ttCGATGATCTCGAAGCCGGCCTCACTCAACGCAGCCCTCAGGCGACCGAGCTTGCTCTGGGTGTCGTCGATCAGCAGGATGCGCAACATGTTCGTCCCCCTCACGCGCCGACACGGGCATCGGGCAACTCGCCCAAGGCATGCAAGCTg      >  1:1319771/1‑150 (MQ=255)
                                                                                                                                                  gatgatCTCGAAGCCGGCCTCACTCAACGCAGCCCTCAGGCGACCGAGCTTGCTCTGGGTGTCGTCGATCAGCAGGATGCGCAACATGTTc                                                              >  1:1692906/1‑91 (MQ=255)
                                                                                                                                                   atgatCTCGAAGCCGGCCTCACTCAACGCAGCCCTCAGGCGACCGAGCTTGCTCTGGGTGTCGTCGATCAGCAGGATGCGCAACATGTTCGTCCCCCTCACGCGCCGACACGGGCATCGGGCAACTCGCCCAAGGCATGCAAGCTGAAAc  >  2:1456154/1‑150 (MQ=255)
                                                                                                                                                   atgatCTCGAAGCCGGCCTCACGCAAGGAAGCGCTCAGGCGACCGAGGTTGCTATGGGTGTCGTCGATCAGCAGGATGCGCAACATGTTCGTCGCCCTCAAGCGCCGAAACGGGCATCGGGCAACTCGCCCAAGGCATGCAAGCTGAAAc  >  2:980525/1‑150 (MQ=255)
                                                                                                                                                    |                                                                                                                                                     
AACACGATGGGCCGCGGCTGGTCACGGCTGACCAGCACTACCTGTTCCATCACATCGCGGTCTGGCGAGTCGGTATCGATCAGCACCACGTCCGGGCGCACCGTTTCGACGCAGGCGGGCAGGTCGATGGTCAGGTCTGGGGCTTCGATGATCTCGAAGCCGGCCTCACTCAACGCAGCCCTCAGGCGACCGAGCTTGCTCTGGGTGTCGTCGATCAGCAGGATGCGCAACATGTTCGTCCCCCTCACGCGCCGACACGGGCATCGGGCAACTCGCCCAAGGCATGCAAGCTGAAAC  >  NC_002947/2385688‑2385984

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: