| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,673,147 | Δ1 bp | 8.6% | coding (418/519 nt) | PP_2340 → | hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,673,147 | 0 | G | . | 8.6% | 250.3 / 18.5 | 81 | coding (418/519 nt) | PP_2340 | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base G (38/36); new base . (4/3); total (42/39) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.61e-01 | |||||||||||
TCCATCCGCTTTGTCGAGCAGCAGTCGGCGTATTGCTGGGCTTACCAGCTGATTGCCCGCG‑GGGCGCGGATGATCCGTGACCTGGAGGCCTATGGCATGGTGTTGCTGCCGGAGTTCCGTGACTGGGAACTGCCCCAATTGCGCGATGCGATCG‑ATCGCGAGTTCTTCCTGCTTTCAGAGGCGCACTACCAGCGCTATATCGCCCCCAGCTTCCTGCGCGATGCCATGGGCAGCGCGCAGGGCCAGTGAGCCGGGCGAATCAGTCGCCGGTGTATTCGCAACCGCTGGTGCAGGT > NC_002947/2673000‑2673294 | tCCATCCGCTTTGTCGAGCAGCAGTCGGCGTATTGCTGGGCTTACCAGCTGATTGCCCGCG‑GGGCGCGGATGATCCGTGACTTGGCGGCCTATGGCATGGTGTTGCTGCGGGAGTTCCGTGACTGGGAACTGCCCCAATTGCgcgatgcg > 1:654823/1‑150 (MQ=255)tCCATCCGCTTTGTCGAGCAGCAGTCGGCGTATTGCTGGGCTTACCAGCTGATTGCCCGCG‑GGGCGCGGATGATCCGTGACCTGGAGGCCTATGGCATGGTGTTGCTGCCGGAGTTCCGTGACTGGGAACTGCCCCAATTGCgcgatgcg > 2:2350647/1‑150 (MQ=255)tCCATCCGCTTTGTCGAGCAGCAGTCGGCGTATTGCTGGGCTTACCAGCTGATTGCCCGCG‑GGGCGCGGATGATCCGTGACCTGGAGGCCTATGGCATGGTGTTGCTGCCGGAGTTCCGTGACTGGGAACTGCCCCAATTGCgcgatg > 2:978983/1‑148 (MQ=255)tCCATCCGCTTTGTCGAGCAGCAGTCGGCGTATTGCTGGGCTTACCAGCTGATTGCCCGCG‑GGGCGCGGATGATCCGTGACCTGGAGGCCTATGGCATGGTGTTGCTGCCGGAGTTCCGTGACTGGGAACTGCCCCAATTGCgcgatg < 1:978983/148‑1 (MQ=255) aTCCGCTTTGTCGAGCAGCAGTCGGCGTATTGCTGGGCTTACCAGCTGATTGCCCACGCTGGCGATCA‑GCTCCTTGGCTTCGAGGCCTTGGGCATGGTGTTGATGCAGGAGTTTTGTGTCTGGGAACTGCCCCAATTGCGCGATGcgatc < 1:2350647/150‑1 (MQ=255) ccGCTTTGTCGAGCAGCAGTCGGCGTATTGCTGGGCTTACCAGCTGATTGCCCGCG‑GGGCGCGGATGATCCGTGACCTGGAGGCCTATGGCATGGTGTTGCTGCCGGAGTTCCGTGACTGGGAACTGCCCCAATTGCGCGATGcgatcg‑a > 2:2096425/1‑150 (MQ=255) tCGAGCAGCAGTCGGCGTATTGCTGGGCTTACCAGCTGATTGCCCGCG‑GGGCGCGGATGATCCGTGACCTGGAGGCCTATGGCATGGTGTTGCTGCCGGAGTTCCGTGACTGGGAACTGCCCCAATTGCgcgatgcgat < 1:1163651/139‑1 (MQ=255) tCGAGCAGCAGTCGGCGTATTGCTGGGCTTACCAGCTGATTGCCCGCG‑GGGCGCGGATGATCCGTGACCTGGAGGCCTATGGCATGGTGTTGCTGCCGGAGTTCCGTGACTGGGAACTGCCCCAATTGCgcgatgcgat > 2:1163651/1‑139 (MQ=255) gAGCAGCAGTCGGCGTATTGCTGGGCTTACCAGCTGATTGCCCGCG‑GGGCGCGGATGATCCGTGACCTGGAGGCCTATGGCATGGTGTTGCTGCCGGAGTTCCGTGACTGGGAACTGCCCCAATTGCGCGATGCGATCG‑ATCGCGAGttc < 1:1826066/150‑1 (MQ=255) agcagcAGTCGGCGTATTGCTGGGCTTACCAGCTGATTGCCCGCG‑GGGCGCGGATGATCCGTGACCTGGAGGCCTATGGCATGGTGTTGCTGCCGGAGTTCCGTGACTGGGAACTGCCCCAATTGCGCGATGCGATCG‑ATCGCGa < 2:2113485/145‑1 (MQ=255) agcagcAGTCGGCGTATTGCTGGGCTTACCAGCTGATTGCCCGCG‑GGGCGCGGATGATCCGTGACCTGGAGGCCTATGGCATGGTGTTGCTGCCGGAGTTCCGTGACTGGGAACTGCCCCAATTGCGCGATGCGATCG‑ATCGCGa > 1:2113485/1‑145 (MQ=255) agcagTCGGCGTATTGCTGGGCTTACCAGCTGATTGCCCGCG‑GGGCGCGGATGATCCGTGACCTGGAGGCCTATGGCATGGTGTTGCTGCCGGAGTTCCGTGACTGGGAACTGCCCCAATTGCGCGATGCGATCG‑ATCGCGAGTTCTTcc > 1:1591312/1‑150 (MQ=255) agTCGGCGTATTGCTGGGCTTACCAGCTGATTGCCCGCG‑GGGCGCGGATGATCCGTGACCTGGAGGCCTATGGCATGGTGTTGCTGCCGGAGTTCCGTGACTGGGAACTGCCCCAATTGCGCGATGCGATCG‑ATCGCGAGTTCTTCCTGc > 1:575965/1‑150 (MQ=255) ggCGTATTGCTGGGCTTACCAGCTGATTGCCCGCG‑GGGCGCGGATGATCCGTGACCTGGAGGCCTATGGCATGGTGTTGCTGCCGGAGTTCCGTGACTGGGAACTGCCCCAATTGCGCGATGCGATCG‑ATCGCGAGTTCTTCCTGCTTTc < 1:2096353/150‑1 (MQ=255) gTATTGCTGGGCTTACCAGCTGATTGCCCGCG‑GGGCGCGGATGATCCGTGACCTGGAGGCCTATGGCATGGTGTTGCTGCCGGAGTTCCGTGACTGGGAACTGCCCCAATTGCGCGATGCGATCG‑ATCGCGAGTTCTTCCTGCTTTCaga < 1:212312/150‑1 (MQ=255) tGGGCTTACCAGCTGATTGCCCGCG‑GGGCGCGGATGATCCGTGACCTGGAGGCCTATGGCATGGTGTTGCTGCCGGAGTTCCGTGACTGGGAACTGCCCCAATTGCGCGATGCGATCG‑ATCGCGAGTTCTTCCTGCTTTCAGAGGCGCAc < 1:2173887/150‑1 (MQ=255) ttACCAGCTGATTGCCCGCG‑GGGCGCGGATGATCCGTGACCTGGAGGCCTATGGCATGGTGTTGCTGCCGGAGTTCCGTGACTGGGAACTGCCCCAATTGCGCGATGCGATCG‑ATCGCGAGTTCTTCCTGCTTTCAGAGGCGCACTACCa > 2:927802/1‑150 (MQ=255) ccAGCTGATTGCCCGCG‑GGGCGCGGATGATCCGTGACCTGGAGGCCTATGGCATGGTGTTGCTGCCGGAGTTCCGTGACTGGGAACTGCCCCAATTGCGCGATGCGATCG‑ATCGCGAGTTCTTCCTGCTTTCAGAGGCGCACTACCAgcg > 2:943288/1‑150 (MQ=255) cAGCTGATTGCCCGCG‑GGGCGCGGATGATCCGTGACCTGGAGGCCTATGGCATGGTGTTGCTGCCGGAGTTCCGTGACTGGGAACTGCCCCAATTGCGCGATGCGATCG‑ATCGCGAGTTCTTCCTGCTTTCAGAgg < 1:909922/136‑1 (MQ=255) cAGCTGATTGCCCGCG‑GGGCGCGGATGATCCGTGACCTGGAGGCCTATGGCATGGTGTTGCTGCCGGAGTTCCGTGACTGGGAACTGCCCCAATTGCGCGATGCGATCG‑ATCGCGAGTTCTTCCTGCTTTCAGAgg > 2:909922/1‑136 (MQ=255) aGCTGATTGCCCGCG‑GGGCGCGGATGATCCGTGACCTGGAGGCCTATGGCATGGTGTTGCTGCCGGAGTTCCGTGACTGGGAACTGCCCCAATTGCGCGATGCGATCG‑ATCGCGAGTTCTTCCTGCTTTCAGAGGCGCACTACCAGCGCt > 1:1958431/1‑150 (MQ=255) gATTGCCCGCG‑GGGCGCGGATGATCCGTGACCTGGAGGCCTATGGCATGGTGTTGCTGCCGGAGTTCCGTGACTGGGAACTGCCCCAATTGCGCGATGCGATCG‑ATCGCGAGTTCTTCCTGCTTTCAGAGGCGCACTACCAGCGCTatat < 1:584246/150‑1 (MQ=255) aTTGCCCGCG‑GGGCGCGGATGATCCGTGACCTGGAGGCCTATGGCATGGTGTTGCTGCCGGAGTTCCGTGACTGGGAACTGCCCCAATTGCGCGATGCGATCG‑ATCGCGAGTTCTTCCTGCTTTCAGAGGCGCACTACCAGCGCTATATc < 2:1591312/150‑1 (MQ=255) cccGCG‑GGGCGCGGATGATCCGTGACCTGGAGGCCTATGGCATGGTGTTGCTGCCGGAGTTCCGTGACTGGGAACTGGCCCAATTGCGCGATGCGATCG‑ATCGCGAGTTCTTCCTGCTTTCAGAGGCGCACTACCAGCGCTATATCGccc > 1:160339/1‑150 (MQ=255) ccGCG‑GGGCGCGGATGATCCGTGACCTGGAGGCCTATGGCATGGTGTTGCTGCCGGAGTTCCGTGACTGGGAACTGCCCCAATTGCGCGATGCGATCG‑ATCGCGAGTTCTTCCTGCTTTCAGAGGCGCACTACCAGCGCTATATCGcccc > 2:2231845/1‑150 (MQ=255) gcg‑GGGCGCGGATGATCCGTGACCTGGAGGCCTATGGCATGGTGTTGCTGCCGGAGTTCCGTGACTGGGAACTGCCCCAATTGCGCGATGCGATCG‑ATCGCGAGTTCTTCCTGCTTTCAGAGGCGCACTACCAGCGCTATATCGCCCCCa < 1:943288/150‑1 (MQ=255) gggCGCGGATGATCCGTGACCTGGAGGCCTATGGCATGGTGTTGCTGCCGGAGTTCCGTGACTGGGAACTGCCCCAATTGCGCGATGCGATCG‑ATCGCGAGTTCTTCCTGCTTTCAGAGGCGCACTACCAGCGCTATATCGCCCCCAGCt > 2:1438796/1‑150 (MQ=255) ggCGCGGATGATCCGTGACCTGGAGGCCTATGGCATGGTGTTGCTGCCGGAGTTCCGTGACTGGGAACTGCCCCAATTGCGCGATGCGATCG‑ATCGCGAGTTCTTCCTGCTTTCAGAGGCGCACTACCAGCGCTATATCGCCCCCAGCtt < 1:582941/150‑1 (MQ=255) gTGACCTGGAGGCCTATGGCATGGTGTTGCTGCCGGAGTTCCGTGACTGGGAACTGCCCCAATTGCGCGATGCGATCG‑ATCGCGAGTTCTTCCTGCTTTCAGAGGCGCACTACCAGCGCTATATCGCCCCCAGCTTCCTGCGCGATGCCa > 2:582084/1‑150 (MQ=255) gTGACCTGGAGGCCTATGGCATGGTGTTGCTGCCGGAGTTCCGTGACTGGGAACTGCCCCAATTGCGCGATGCGATCG‑ATCGCGAGTTCTTCCTGCTTTCAGAGGCGCACTACCAGCGCTATATCGCCCCCAGCTTCCTGCGCGATGCCa > 1:1362734/1‑150 (MQ=255) tGACCTGGAGGCCTATGGCATGGTGTTGCTGCCGGAGTTCCGTGACTGGGAACTGCCCCAATTGCGCGATGCGATCG‑ATCGCGAGTTCTTCCTGCTTTCAGAGGCGCACTACCAGCGCTATATCGCCCCCAGCTTCCTGCGCGATGCCAt < 1:2096425/150‑1 (MQ=255) tGGAGGCCTATGGCATGGTGTTGCTGCCGGAGTTCCGTGACTGGGAACTGCCCCAATTGCGCGATGCGATCG‑ATCGCGAGTTCTTCCTGCTTTCAGAGGCGCACTACCAGCGCTATATCGCCCCCAGCTTCCTGCGCGATGCCATGGGCa > 2:105913/1‑150 (MQ=255) aGGCCTATGGCATTGTGTTGCTGCCGGAGTTCCGTGACTGGGAACTGCCCCAATTGCGCGATGCGATCG‑ATCGCGAGTTCTTCCTGCTTTCAGAGGCGCACTACCAGCGCTATATCGCCCCCAGCTTCCTGCGCGATGCCATGGGCAgcg > 1:1643057/1‑150 (MQ=255) aGGCCTATGGCATGGTGTTGCTGCCGGAAGTCCGTGACTGGGAACTGCCCCAATTGCGCGATGCGATCG‑ATCGCGAGTTCTTCCTGCTTTCAGAGGCGCACTACCAGCGCTATATCGCCCCCAGCTTCCTGCGCGATGCCATGGGCAgcg > 1:1643280/1‑150 (MQ=255) ggCCTATGGCATGGTGTTGCTGCCGGAGTTCCGTGACTGGGAACTGCCCCAATTGCGCGATGCGATCG‑ATCGCGAGTTCTTCCTGCTTTCAGGGGCGCGCTACCAGCGCTATATCGCCCCCAGCTTCCTGCGCGATGCCATGGGCAgcgc < 1:2100786/150‑1 (MQ=255) gCCTATGGCATGGTGTTGCTGCCGGAGTTCCGTGACTGGGAACTGCCCCAATTGCGCGATGCGATCG‑ATCGCGAGTTCTTCCTGCTTTCAGAGGCGCACTACCAgcgc < 1:1214337/108‑1 (MQ=255) gCCTATGGCATGGTGTTGCTGCCGGAGTTCCGTGACTGGGAACTGCCCCAATTGCGCGATGCGATCG‑ATCGCGAGTTCTTCCTGCTTTCAGAGGCGCACTACCAgcgc > 2:1214337/1‑108 (MQ=255) gCCTATGGCATGGTGTTGCTGCCGGAGTTCCGTGACTGGGAACTGCCCCAATTGCGCGATGCGATCG‑ATCGCGAGTTCTTCCTGCTTTCAGAGGCGCACTACCAGCGCTATATCGcccc > 2:2123322/1‑119 (MQ=255) gCCTATGGCATGGTGTTGCTGCCGGAGTTCCGTGACTGGGAACTGCCCCAATTGCGCGATGCGATCG‑ATCGCGAGTTCTTCCTGCTTTCAGAGGCGCACTACCAGCGCTATATCGcccc < 1:2123322/119‑1 (MQ=255) cTATGGCATGGTGTTGCTGCCGGAGTTCCGTGACTGGGAACTGCCCCAATTGCGCGATGCGATCG‑ATCGCGAGTTCTTCCTGCTTTCAGAGGCGCACTACCAGCGCTATATCGCCCCCAGCTTCCTGCGCGATGCCATGGGCAGCGCGCa < 2:1362734/150‑1 (MQ=255) cTATGGCATGGTGTTGCTGCCGGAGTTCCGTGACTGGGAACTGCCCCAATTGCGCGATGCGATCG‑ATCGCGAGTTCTTCCTGCTTTCAGAGGCGCACTACCAGCGCTATATCGCCCCCAGCTTCCTGCGCGATGCCATGGGCAGCGCGCa < 2:1768008/150‑1 (MQ=255) cTATGGCATGGTGTTGCTGCCGGAGTTCCGTGACTGGGAACTGCCCCAATTGCGCGATGCGATCG‑ATCGCGAGTTCTTCCTGCTTTCAGAGGCGCACTACCAGCGCTATATCGCCCCCAGCTTCCTGCGCGATGCCATGGGCAGCGCGCa > 1:1540628/1‑150 (MQ=255) ggCATGGTGTTGCTGCCGGAGTTCCGTGACTGGGAACTGCCCCAATTGCGCGATGCGATCG‑ATCGCGAGTTCTTCCTGCTTTCAGAGGCGCACTACCAGCGCTATATCGCCCCCAGCTTCCTGCGCGATGCCATGGGCAGCGCGCAGGGc < 2:575965/150‑1 (MQ=255) gCATGGTGTTGCTGCCGGAGTTCCGTGACTGGGAACTGCCCCAATTGCGCGATGCGATCG‑ATCGCGAGTTCTTCCTGCTTTCAGAGGCGCACTACCAGCGCtata < 2:2047788/105‑1 (MQ=255) gCATGGTGTTGCTGCCGGAGTTCCGTGACTGGGAACTGCCCCAATTGCGCGATGCGATCG‑ATCGCGAGTTCTTCCTGCTTTCAGAGGCGCACTACCAGCGCtata > 1:2047788/1‑105 (MQ=255) cATGGTGTTGCTGCCGGAGTTCCGTGACTGGGAACTGCCCCAATTGCGCGATGCGATCG‑ATCGCGAGTTCTTCCTGCTTTCAGAGGCGCACTACCAGCGCTATATCGCCCCCAGCTTCCTGCGCGATGCCATGGGCAGCGCGCAGGGCCa < 1:1423557/150‑1 (MQ=255) aTGGTGTTGCTGCCGGAGTTCCGTGACTGGGAACTGCCCCAATTGCGCGATGCGATCG‑ATCGCGAGTTCTTCCTGCTTTCAGAGGCGCACTACCAGCGCTATATCGCCCCCAGCTTCCTGCGCGATGCCATGGGCa < 2:2258879/136‑1 (MQ=255) aTGGTGTTGCTGCCGGAGTTCCGTGACTGGGAACTGCCCCAATTGCGCGATGCGATCG‑ATCGCGAGTTCTTCCTGCTTTCAGAGGCGCACTACCAGCGCTATATCGCCCCCAGCTTCCTGCGCGATGCCATGGGCa > 1:2258879/1‑136 (MQ=255) aTGGTGTTGCTGCCGGAGTTCCGTGACTGGGAACTGCCCCAATTGCGCGATGCGATCG‑ATCGCGAGTTCTTCCTGCTTTCAGAGGCGCACTACCAGCGCTATATCGCCCCCAGCTTCCTGCGCGATGCCATGGGCAGCGCGCAGGGCCAg > 1:324796/1‑150 (MQ=255) tGGTGTTGCTGCCGGAGTTCCGTGACTGGGAACTGCCCCAATTGCGCGATGCGATCG‑ATCGCGAGTTCTTCCTGCTTTCAGAGGCGCACTACCAGCGCTATATCGCCCCCAGCTTCCTGCGCGATGCCATGGGCAGCGCGCAGGGCCAGt < 1:927802/150‑1 (MQ=255) gtTGCTGCCGGAGTTCCGTGACTGGGAACTGCCCCAATTGCGCGATGCGATCG‑ATCGCGAGTTCTTCCTGCTTTCAGAGGCGCACTACCAGCGCTATATCGCCCCCAGCTTCCTGCGCGATGCCATGGGCAGCGCGCAGGGCCAGTGAGc < 2:324796/150‑1 (MQ=255) ctgcCGGAGTTCCGTGACTGGGAACTGCCCCAATTGCGCGATGCGATCG‑ATCGCGAGTTCTTCCTGCTTTCAGAGGCGCACTACCAGCGCTATATCGCCCCCAGCTTCCTGCGCGATGCCATGGGCAGCGCGCAGGGCCAGTGAGCCggg < 2:597214/150‑1 (MQ=255) tgcCGGAGTTCCGTGACTGGGAACTGCCCCAATTGCGCGATGCGATCG‑ATCGCGAGTTCTTCCTGCTTTCAGAGGCGCACTACCAGCGCTATATCGCCCCCAGCTTCCTGCGCGATGCCATGGGCAGCGCGCAGGGCCAGTGAGCCGGGc > 1:202200/1‑150 (MQ=255) gAGTTCCGTGACTGGGAACTGCCCCAATTGCGCGATGCGATCG‑ATCGCGAGTTCTTCCTGCTTTCAGAGGCGCACTACCAGCGCTATATCGCCCCCAGCTTCCTGCGCGATGCCATGGGCAGCGCGCAGGGCCAGTGAGCCGGGCGAATc > 1:2091337/1‑150 (MQ=255) aGTTCCGTGACTGGGAACTGCCCCAATTGCGCGATGCGATCG‑ATCGCGAGTTCTTCCTGCTTTCAGAGGCGCACTACCAGCGCTATATCGCCCCCAGCTTCCTGCGCGATGCCATGGGCAGCGCGCAGGGCCAGTGAGCCGGGCGAATCa < 1:1712295/150‑1 (MQ=255) ttCCGTGACTGGGAACTGCCCCAATTGCGCGATGCGATCG‑ATCGCGAGTTCTTCCTGc < 1:1566811/58‑1 (MQ=255) ttCCGTGACTGGGAACTGCCCCAATTGCGCGATGCGATCG‑ATCGCGAGTTCTTCCTGc > 2:1566811/1‑58 (MQ=255) ttCCGTGACTGGGAACTGCCCCAATTGCGCGATGCGATCG‑ATCGCGAGTTCTTCCTGCTTTCAGAGGCGCACTACCAGCGCTATATCGCCCCCAGCTTCCTGCGCGATGCCATGGGCAgc < 1:1598776/120‑1 (MQ=255) ttCCGTGACTGGGAACTGCCCCAATTGCGCGATGCGATCG‑ATCGCGAGTTCTTCCTGCTTTCAGAGGCGCACTACCAGCGCTATATCGCCCCCAGCTTCCTGCGCGATGCCATGGGCAgc > 2:1598776/1‑120 (MQ=255) tCCGTGACTGGGAACTGCCCCAATTGCGCGATGCGATCG‑ATCGCGAGTTCTTCCTGCTTTCAGAGGCGCACTACCAGCGCTATATCGCCCCCAGCTTCCTGCGCGATGCCATGGGCAGCGCGCAGGGCCAGTGAGCCGGGCGAATCAGTc < 1:2203720/150‑1 (MQ=255) ccGTGACTGGGAACTGCCCCAATTGCGCGATGCGATCG‑ATCGCGAGTTCTTCCTGCTTTCAGAGGCGCACTACCAGCGCTATATCGCCCCCAGCTTCCTGCGCGATGCCATGGGCAGCGCGCAGGGCCAGTGAGCCGGGCGAATCAGTCg > 2:1868195/1‑150 (MQ=255) cGTGACTGGGAACTGCCCCAATTGCGCGATGCGATCG‑ATCGCGAGTTCTTCCTGCTTTCAGAGGCGCACTACCAGCGCTATATCGCCCCCAGCTTCCTGCGCGATGCCATGGGCAGCGCGCAGGGCCATTGAGCCGGGCGAATCAGTCGc > 1:2018833/1‑150 (MQ=255) cGTGACTGGGAACTGCCCCAATTGCGCGATGCGATCG‑ATCGCGAGTTCTTCCTGCTTTCAGAGGCGCACTACCAGCGCTATATCGCCCCCAGCTTCCTGCGCGATGCCATGGGCAGCGCGCAGGGCCAGTGAGCCGGGCGAATCAGTCGc < 2:2158594/150‑1 (MQ=255) tGGGAACTGCCCCAATTGCGCGATGCGATCG‑ATCGCGAGTTCTTCCTGCTTTCAGAGGCGCACTACCAGCGCTATATCGCCCCCAGCTTCCTGCGCGATGCCATGGGCAGCGCGCAGGGCCAGTGAGCCGGGCGAATCAGTCGCCGgtgt > 2:345217/1‑150 (MQ=255) ggAACTGCCCCAATTGCGCGATGCGATCG‑ATCGCGAGTTCTTCCTGCTTTCAGAGGCGCACTACCAGCGCTATATCGCCCCCAGCTTCCTGCGCGATGCCATGGGCAGCGCGCAGGGCCAGTGAGCCGGGCGAATCAGTCGCCGGTGTAt > 1:1317283/1‑150 (MQ=255) aaCTGCCCCAATTGCGCGATGCGATCG‑ATCGCGAGTTCTTCCTGCTTTCAGAGGCGCACTACCAGCGCTATATCGCCCCCAGCTTCCGGCGCGATGCCATGGGCAGCGCGCAGGGCCCGTGAGCCGGGCGAATCAGTCGCCGGTGTATTc < 1:666751/150‑1 (MQ=255) ccccAATTGCGCGATGCGATCG‑ATCGCGAGTTCTTCCTGCTTTCAGAGGCGCACTACCAGCGCtat > 2:1653641/1‑66 (MQ=255) ccccAATTGCGCGATGCGATCG‑ATCGCGAGTTCTTCCTGCTTTCAGAGGCGCACTACCAGCGCtat < 1:1653641/66‑1 (MQ=255) ccccAATTGCGCGATGCGATCG‑ATCGCGAGTTCTTCCTGCTTTCAGAGGCGCACTACCAGCGCTATATCGCCCCCAGCTTCCTGCGCGATGCCATGGGCAGCGCGCAgg < 1:2189573/109‑1 (MQ=255) ccccAATTGCGCGATGCGATCG‑ATCGCGAGTTCTTCCTGCTTTCAGAGGCGCACTACCAGCGCTATATCGCCCCCAGCTTCCTGCGCGATGCCATGGGCAGCGCGCAgg > 2:2189573/1‑109 (MQ=255) ccccAATTGCGCGATGCGATCG‑ATCGCGAGTTCTTCCTGCTTTCAGAGGCGCACTACCAGCGCTATATCGCCCCCAGCTTCCTGCGCGATGCCATGGGCAGCGCGCAGGGCCAGTGAGCCGGGCGAATCAGTCGCCGGTGTATTCGCAAc > 1:1311272/1‑150 (MQ=255) ccccAATTGCGCGATGCGATCG‑ATCGCGAGTTCTTCCTGCTTTCAGAGGCGCACTACCAGCGCTATATCGCCCCCAGCTTCCTGCGCGATGCCATGGGCAGCGCGCAGGGCCAGTGAGCCGGGCGAATCAGTCGCCGGTGTATTCGCAAc > 1:1371814/1‑150 (MQ=255) cccAATTGCGCGATGCGATCG‑ATCGCGAGTTCTTCCTGCTTTCAGAGGCGCACTACCAGCGCTATATCGCCCCCAGCTTCCTGCGCGATGCCATGGGCAGCGCGCAGGGCCAGTGAGCCGGGCGAATCAGTCGCCGGTGTATTCGCAAcc > 1:1679951/1‑150 (MQ=255) ccAATTGCGCGATGCGATCG‑ATCGCGAGTTCTTCCTGCTTTCAGAGGCGCACTACCAGCGCTATATCGCCCCCAGCTTCCTGCGCGATGCCATGGGCAGCGCGCAGGGCCAGTGAGCCGGGCGAATCAGTCGCCGGTGTATTCGCAACCg > 1:2379711/1‑150 (MQ=255) cAATTGCGCGATGCGATCG‑ATCGCGAGTTCTTCCTGCTTTCAGAGGCGCACTACCAGCGCTATATCGCCCCCAGCTTCCTGCGCGATGCCATGGGCAGCGCGCAGGGCCAGTGAGCCGGGCGAATCAGTCGCCGGTGTATTCGCAACCGc > 2:2348584/1‑150 (MQ=255) aaTTGCGCGATGCGATCG‑ATCGCGAGTTCTTCCTGCTTTCAGAGGCGCACTACCAGCGCTATATCGCCCCCAGCTTCCTGCGCGATGCCATGGGCAGCGCGCAGGGCCAGTGAGCCGGGCGAATCAGTCGCCGGTGTATTCGCAACCGCt < 1:458920/150‑1 (MQ=255) tttGCGCGATGCGATCG‑ATCGCGAGTTCTTCCTGCTTTCAGAGGCGCACGACCAGCGCTATATCGCCCCCAGCTTCCTGCGCGATGCCATGGGCAGCGCGCAGGGCCAGTGAGCCGGGCGAATCAGTCGCCGGTGTATTCGCAACCGCTg < 1:547373/149‑1 (MQ=255) aTTGCGCGATGCGATCG‑ATCGCGAGTTCTTCCTGCTTTCAGAGGCGCACTACCAGCGCTATATCGCCCCCAGCTTCCTGCGCGATGCCATGGGCAGCGCGCa < 2:265295/102‑1 (MQ=255) aTTGCGCGATGCGATCG‑ATCGCGAGTTCTTCCTGCTTTCAGAGGCGCACTACCAGCGCTATATCGCCCCCAGCTTCCTGCGCGATGCCATGGGCAGCGCGCa > 1:265295/1‑102 (MQ=255) aTTGCGCGATGCGATCG‑ATCGCGAGTTCTTCCTGCTTTCAGAGGCGCACTACCAGCGCTATATCGCCCCCAGCTTCCTGCGCGATGCCATGGGCAGCGCGCAGGGCCAGTGAGCCGGGCGAATCAGTCGCCGGTGTATTCGCAACCGCTg < 2:654823/150‑1 (MQ=255) ctcgcgAT‑CGATCGCATCGCGAGTTCTTCCTGCTTTCAGAGGCGCACTACCAGCGCTATATCGCCCCCAGCTTCCTGCGCGATGCCATgg < 1:644833/88‑1 (MQ=255) ctcgcgAT‑CGATCGCATCGCGAGTTCTTCCTGCTTTCAGAGGCGCACTACCAGCGCTATATCGCCCCCAGCTTCCTGCGCGATGCCATgg > 2:644833/3‑90 (MQ=255) ctcgcgAT‑CGATCGCATCGCGAGTTCTTCCTGCTTTCAGAGGCGCACTACCAGCGCTATATCGCCCCCAGCTTCCTGCGCGATGCCATGGGCAGCGCGCAGGGCCAGTGAGCCGGGCGAATCAGTCGCCGgt > 1:510804/3‑132 (MQ=255) ctcgcgAT‑CGATCGCATCGCGAGTTCTTCCTGCTTTCAGAGGCGCACTACCAGCGCTATATCGCCCCCAGCTTCCTGCGCGATGCCATGGGCAGCGCGCAGGGCCAGTGAGCCGGGCGAATCAGTCGCCGgt < 2:510804/130‑1 (MQ=255) tcgcgAT‑CGATCGCATCGCGAGTTCTTCCTGCTTTCAGAGGCGCACTACCAGCGCTATATCGCCCCCAGCTTCCTTCGCGATGCCATg > 1:1498091/2‑88 (MQ=255) tcgcgAT‑CGATCGCATCGCGAGTTCTTCCTGCTTTCAGAGGCGCACTACCAGCGCTATATCGCCCCCAGCTTCCTGCGCGATGCCATg < 2:1498091/87‑1 (MQ=255) tcgcgAT‑CGATCGCATCGCGAGTTCTTCCTGCTTTCAGAGGCGCACTACCAGCGCTATATCGCCCCCAGCTTCCTGCGCGATGCCATGGGCAGCGCGCAGGGCCAGTGAGCCGGGCGAATCAGTCGCCGGTGTATTCGCAACCGCTGGTg > 2:1470073/2‑150 (MQ=255) gatgcgatCG‑ATCGCGAGTTCTTCCTGCTTTCAGAGGCGCACTACCAGCGCTATATCGCCCCCAGCTTCCTGCGCGATGCCATGGGCAGCGCGCAGGGCCAGTGAGCCGGGCGAATCAGTCGCCGGTGTATTCGCAACCGCTGGTGCAgg < 2:2379711/150‑1 (MQ=255) gatgcgatCG‑ATCGCGAGTTCTTCCTGCTTGCAGAGGCGCACTACCAGCGCTATATCGCCCCCAGCTTCCTGCGCGATGCCATGGGCGGCGCGCAGGGCCAGTGAGCCGGGCGAATCAGTCGCCGGTGTATTCGCAACCGCTGGTGCAgg < 2:1502962/150‑1 (MQ=255) atgcgatCG‑ATCGCGAGTTCTTCCTGCTTTCAGAGGCGCACTACCAGCGCTATATCGCCCCCAGCTTCCTGCGCGATGCCATGGGCAGCGCGCAGGGCCAGTGAGCCGGGCGAATCAGTCGCCGGTGTATTCGCAACCGCTGGTGCAGGt < 2:2091337/150‑1 (MQ=255) | TCCATCCGCTTTGTCGAGCAGCAGTCGGCGTATTGCTGGGCTTACCAGCTGATTGCCCGCG‑GGGCGCGGATGATCCGTGACCTGGAGGCCTATGGCATGGTGTTGCTGCCGGAGTTCCGTGACTGGGAACTGCCCCAATTGCGCGATGCGATCG‑ATCGCGAGTTCTTCCTGCTTTCAGAGGCGCACTACCAGCGCTATATCGCCCCCAGCTTCCTGCGCGATGCCATGGGCAGCGCGCAGGGCCAGTGAGCCGGGCGAATCAGTCGCCGGTGTATTCGCAACCGCTGGTGCAGGT > NC_002947/2673000‑2673294 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |