| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 3,541,352 | Δ1 bp | 6.0% | coding (422/807 nt) | PP_3128 → | exopolysaccharide biosynthesis/transport protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 3,541,352 | 0 | A | . | 6.0% | 362.8 / 16.4 | 116 | coding (422/807 nt) | PP_3128 | exopolysaccharide biosynthesis/transport protein |
| Reads supporting (aligned to +/- strand): ref base A (49/59); new base . (2/5); total (51/65) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.60e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.22e-01 | |||||||||||
Only 100 of 116 total aligned reads displayed.
CACCTCGCCAACGCCGGAAGCGGGCAAGACCATGCTGGCGATCAACCTGGCCATGAGTATTGCCCACCACACCACCAAGACTGCGTTACTGGTGGACTTCGACCTGCGCCGGCCCAAGGTCGGCAGTTACCTGGGCCTGC‑CCATGGAGCAGGCACTGAACGAGTTTCTGACGGACAAGGCCGAGTTGCAGGACTGCCTGGTCAACCCCACCTTGCCGCGCTTCGTGGTGCTGCCAACGCGGGTACCCGTGCCCCTGTCGACCGAGATGCTGTCCTCGCCCAAGGTGAACAACCTG > NC_002947/3541206‑3541500 | ccTCGCCAACGCCGGAAGCGGGCAAGACCATGCTGGCGATCAACCTGGCCATGAGTATTGCCCACCACACCACCACGACTGCGTTACTGGTGGACTTCGACCTGCGCCGGCCCAAGGTCGGCAGTTACCTGGGCCTGC‑CCATGGAGCAgg < 2:1539849/150‑1 (MQ=255) ccTCGCCAACGCCGGAAGCGGGCAAGACCATGCTGGCGATCAACCTGGCCATGAGTATTGCCCACCACACCACCAAGACTGCGTTACTGGTGGACTTCGACCTGCGCCGGCCCAAGGTCGGCAGTTACCTGGTCCTGC‑CGATGGAGCAgg > 2:599535/1‑150 (MQ=255) ccTCGCCAACGCCGGAAGCGGGCAAGACCATGCTGGCGATCAACCTGGCCATGAGTATTGCCCACCACACCACCAAGACTGCGTTACTGGTGGACTTCGACCTGCGCCGGCCCAAGGTCGGCAGTTACCTGGGCCTGCTCCATGG‑GCAgg < 2:2265642/150‑1 (MQ=255) ccTCGCCAACGCCGGAAGCGGGCAAGACCATGCTGGCGATCAACCTGGCCATGAGTATTGCCCACCACACCACCAAGACTGCGTTACTGGTGGACTTCGACCTGCGCCGGCCCAAGGTCGGCAGTTACCTGGGCCTGC‑CCATGGAGCAgg < 1:1922801/150‑1 (MQ=255) cTCGCCAACGCCGGAAGCGGGCAAGACCATGCTGGCGATCAACCTGGCCATGAGTATTGCCCACCACACCACCAAGACTGCGTTACTGGTGGACTTCGACCTGCGCCGGCCCAAGGTCGGCAGTTACCTGGGCCTGC‑CCATGGAGCAGGc < 2:579937/150‑1 (MQ=255) cTCGCCAACGCCGGAAGCGGGCAAGACCATGCTGGCGATCAACCTGGCCATGAGTATCGCCCACCACACCACCAAGACTGCGTTACTGGTGGACTTCGACCTGCGCCGGCCCAAGGTCGGCAGTTACCTGGGCCTGC‑CCATGGAGCAGGc > 1:1974093/1‑150 (MQ=255) cTCGCCAACGCCGGAAGCGGGCAAGACCATGCTGGCGATCAAACTGGCCATGAGTATTGCCCACCACACCACTAAGACTGCGTTACTGGTGGACTTCGACCTGCGCCGGCCCAAGGTCGGCAGTTACCTGGGCCTGC‑CCATGGAGCAGGc > 1:314326/1‑150 (MQ=255) ccAACGCCGGAAGCGGGCAAGACCATGCTGGCGATCAACCTGGCCATGAGTATTGCCCACCACACCACCAAGACTGCGTTACTGGTGGACTTCGACCTGCGCCGGCCCAAGGTCGGCAGTTACCTGGGCCTGCTCCATGG‑GCAGGcccag < 1:2128997/150‑5 (MQ=255) ccAACGCCGGAAGCGGGCAAGACCATGCTGGCGATCAACCTGGCCAAAACTATTGCCCACCACACCACCAAGACTGCGTTACTGGTGGACTTCGACCTGCGCCGGCCCAAGGTCGGCAGTTACCTGGGCCTGCTCCATGG‑GCAGGcccag < 1:1467489/150‑5 (MQ=255) cagcGCCGGAATCGGGCAAGACCATGCTGGCGATCAACCTGGCCATGAGTATTGCCCACCACACCACCAAGACTGCGTTACTGGTGGACTTCGACCTGCGCCGGCCCAAGGTCGGCAGTTACCTGGGCCTGC‑CCATGGAGCAGGCACTGa > 2:1242244/4‑150 (MQ=255) aaCGCCGGAAGCGGGCAAGACCATGCTGGCGATCAACCTGGCCATGAGTATTGCCCACCACACCACCAAGACTGCGTTACTGGTGGACTTCGACCTGCGCCGGCCCAAGGTCGGCAGTTACCTGGGCCTGC‑CCATGGAGCAGGCACTGaa < 1:25880/150‑1 (MQ=255) gCCGGAAGCGGGCAAGACCATGCTGGCGATCAACCTGGCCATGAGTATTGCCCACCACACCACCAAGACTGCGTTACTGGTGGACTTCGACCTGCGCCGGCCCAAGGTCGGCAGTTACCTGGGCCTGC‑CCATGGAGCAGGCACTGAACGa < 1:2018189/150‑1 (MQ=255) cGGAAGCGGGCAAGACCATGCTGGCGATCAACCTGGCCATGAGTATTGCCCACCACACCACCAAGACTGCGTTACTGGTGGACTTCGACCTGCGCCGGCCCAAGGTCGGCAGTTACCTGGGCCTGC‑CCATGGAGCAGGCACTGAACGAGt < 1:1242244/150‑1 (MQ=255) gAAGCGGGCAAGACCATGCTGGCGATCAACCTGGCCATGAGTATTGCCCACCACACCACCAAGACTGCGTTACTGGTGGACTTCGACCTGCGCCGGCCCAAGGTCGGCAGTTACCTGGGCCTGC‑CCATGGAGCAGGCACTGAACGAGttt > 1:1655749/1‑150 (MQ=255) aaGCGGGCAAGACCATGCTGGCGATCAACCTGGCCATGAGTATTGCCCACCACACCACCAAGACTGCGTTACTGGTGGACTTCGACCTGCGCCGGCCCAAGGTCGGCAGTTACCTGGGCCTGC‑CCATGGAGCAGGCACTGAACGAGTTTc > 2:18346/1‑150 (MQ=255) agggggCAAGACCATGCTGGCGATCAACCTGGCCATGAGTATTGCCCACCACACCACCAAGACTGCGTTACTGGTGGACTTCGACCTGCGCCGGCCCAAGGTCGGCAGTTACCTGGGCCTAC‑CCATGGAGCAGGCACTGAACGAGTTTCt < 2:156752/147‑1 (MQ=255) gggCAAGACCATGCTGGCGATCAACCTGGCCATGAGTATTGCCCACCACACCACCAAGACTGCGTTACTGGTGGACTTCGACCTGCGCCGGCCCAAGGTCGGCAGTTACCTGGGCCTGC‑CCATGGAGCAGGCACTGAACGAGTTTCTGAc < 2:112402/150‑1 (MQ=255) ggCAAGACCATGCTGGCGATCAACCTGGCCATGAGGATTGCCCACCACACCACCAAGACTGCCTTACTGGTGGACTTCGACCTGCGCCGGCCCAAGGTCGGCAGTTACCTGGGCCTGC‑CCATGGAGCAGGCACTGAACGAGTTTCTGACg < 1:1051370/150‑1 (MQ=255) gCAAGACCATGCTGGCGATCAACCTGGCCATGAGTATTGCCCACCACACCACCAAGACTGCGTTACTGGTGGACTTCGACCTGCGCCGGCCCAAGGTCGGCAGTTACCTGGGCCTGC‑CCATGGAg > 1:2172139/1‑125 (MQ=255) gCAAGACCATGCTGGCGATCAACCTGGCCATGAGTATTGCCCACCACACCACCAAGACTGCGTTACTGGTGGACTTCGACCTGCGCCGGCCCAAGGTCGGCAGTTACCTGGGCCTGC‑CCATGGAg < 2:2172139/125‑1 (MQ=255) gCAAGACCATGCTGGCGATCAACCTGGCCATGAGTATTGCCCACCACACCACCAAGACTGCGTTACTGGTGGACTTCGACCTGCGCCGGCCCAAGGTCGGCAGTTACCTGGGCCTGC‑CCATGGAGCAGGc > 2:2360843/1‑130 (MQ=255) gCAAGACCATGCTGGCGATCAACCTGGCCATGAGTATTGCCCACCACACCACCAAGACTGCGTTACTGGTGGACTTCGACCTGCGCCGGCCCAAGGTCGGCAGTTACCTGGGCCTGC‑CCATGGAGCAGGc < 1:2360843/130‑1 (MQ=255) gCAAGACCATGCTGGCGATCAACCTGGCCATGAGTATTGCCCACCACACCACCAAGACTGCGTTACTGGTGGACTTCGACCTGCGCCGGCCCAAGGTCGGCAGTTACCTGGGCCTGC‑CCATGGAGCAGGCACTGAACGAGTTTCTGACgg > 1:888654/1‑150 (MQ=255) gACCATGCTGGCGATCAACCTGGCCATGCGTATTGCCCACCACACCACCAAGACTGCGTTACTGGTGGACTTCGACCTGCGCCGGCCCAAGGTCGGCAGTTACCTGGGCCTGC‑CCATGGAGCAGGCACTGAACGAGt < 2:1652587/137‑1 (MQ=255) gACCATGCTGGCGATCAACCTGGCCATGAGTATTGCCCACCACACCACCAAGACTGCGTTACTGGTGGACTTCGACCTGCGCCGGCCCAAGGTCGGCAGTTACCTGGGCCTGC‑CCATGGAGCAGGCACTGAACGAGt > 1:1652587/1‑137 (MQ=255) gACCATGCTGGCGATCAACCTCGCCATGAGTATTGCCCACCACACCACCAAGACTGCGTTACTGGTGGACTTCGACCTGCGCCGGCCCAAGGTCGGCAGTTACCTGGGCCTGC‑CCATGGAGCAGGCACTGAACGAGTTTCTGACGGACaa < 1:2137622/150‑1 (MQ=255) ccATGCTGGCGATCAACCTGGCCATGAGTATTGCCCACCACACCACCAAGACTGCGTTACTGGTGGACTTCGACCTGCGCCGGCCCAAGGTCGGCAGTTACCTGGGCCTGC‑CCATGGAGCAGGCACTGAACGAGTTTCTGACGGACAAgg < 2:2036811/150‑1 (MQ=255) cATGCTGGCGATCAACCTGGCCATGAGTATTGCCCACCACACCACCAAGACTGCGTTACTGGTGGACTTCGACCTGCGCCGGCCCAAGGTCGGCAGTTACCTGGGCCTGC‑CCATGGAGCAGGCACTGAACGAGTTTCTGACGGACAAGGc > 1:723085/1‑150 (MQ=255) gCTGGCGATCAAACTGGCCATGAGTATTGCCCACCACACCACCAAGACTGCGTTACTGGTGGACTTCGACCTGCGCCGGCCCAAGGTCGGCAGTTACCTGGACCTGC‑CCATGGAGCAGGCACTGAACGAGTTTCTGACGGACAAGGCCGa < 1:1099949/150‑1 (MQ=255) cTGGCGATCAACCTGGCCATGAGTATTGCCCACCACACCACCAAGACTGCGTTACTGGTGGACTTCGACCTGCGCCGGCCCAAGGTCGGCAGTTACCTGGGCCTGC‑CCATGGAGCAGGCACTGAACGAGTTTCTGACGGACAAGGCCGAg < 2:768942/150‑1 (MQ=255) ggCGATCAACCTGGCCATGAGTATTGCCCACCACACCACCAAGACTGCGTTACTGGTGGACTTCGACCTGCGCCGGCCCAAGGTCGGCAGTTACCTGGGCCTGC‑CCATGGAg > 1:375994/1‑112 (MQ=255) ggCGATCAACCTGGCCATGAGTATTGCCCACCACACCACCAAGACTGCGTTACTGGTGGACTTCGACCTGCGCCGGCCCAAGGTCGGCAGTTACCTGGGCCTGC‑CCATGGAg < 2:375994/112‑1 (MQ=255) gATCAACCTGGCCATGAGTATTGCCCACCACACCACCAAGACTGCGTTACTGGTGGACTTCGACCTGCGCCGGCCCAAGGTCGGCAGTTACCTGGGCCTGC‑CCATGGAGCAGGCACTGAACGAGTTTCTGACGGACAAGGCCGAGTTGcg < 2:1655749/150‑2 (MQ=255) gATCAACCTGGCCATGAGTATTGCCCACCACACCACCAAGACTGCGTTACTGGTGGACTTCGACCTGCGCCGGCCCAAGGTCGGCAGTTACCTGGGCCTGC‑CCATGGAGCAGGCACTGAACGAGTTTCTGACGGACAAGGCCGAGTTGCa > 1:296087/1‑150 (MQ=255) aTCAACCTGGCCATGAGTATTGCCCACCACACCACCAAGACTGCGTTACTGGTGGACTTCGACCTGCGCCGGCCCAAGGTCGGCAGTTACCTGGGCCTGC‑CCATGGAGCAGGCACTGAACGAGTTTCTGACGGACAAGGCCGAGTTGCAg < 2:723085/150‑1 (MQ=255) cTGGCCATGAGTATTGCCCACCACACCACCAAGACTGCGTTACTGGTGGACTTCGACCTGCGCCGGCCCAAGGTCGGCAGTTACCTGGGCCTGC‑CCATGGAGCAGGCACTGAACGAGTTTc < 2:574711/121‑1 (MQ=255) cTGGCCATGAGTATTGCCCACCACACCACCAAGACTGCGTTACTGGTGGACTTCGACCTGCGCCGGCCCAAGGTCGGCAGTTACCTGGGCCTGC‑CCATGGAGCAGGCACTGAACGAGTTTc > 1:574711/1‑121 (MQ=255) cTGGCCATGAGTATTGCCCACCACACCACCAAGACTGCGTTACTGGTGGACTTCGACCTGCGCCGGCCCAAGGTCGGCAGTTACCTGGGCCTGC‑CCATGGAGCAGGCACTGAACGAGTTTCTGACGGACAAGGCCGAGTTGCAGGACTGc > 1:2195164/1‑150 (MQ=255) atgcttATTGCCCCGCGCACCCCCAAGTCCGACTTCCTGCTCGACTTGCCCCTGCGCCAGCCCAATCTCGGCAGTTACCTGGGCCTGC‑CCATGGAGCACGGACTCAACGAGTTTCTGACGGACATGGCCGAGTTGCAGGACTGCCTGGTc < 2:421236/145‑1 (MQ=255) aTGAGTATTGCCCACCACACCACCAAGACTGCGTTACTGGTGGACTTCGACCTGCGCCGGCCCAAGGTCGGCAGTTACCTGGGCCTGC‑CCATGGAGCAGGCACTGAACGAGTTTCTGACGGACAAGGCCGAg > 1:941623/1‑132 (MQ=255) aTGAGTATTGCCCACCACACCACCAAGACTGCGTTACTGGTGGACTTCGACCTGCGCCGGCCCAAGGTCGGCAGTTACCTGGGCCTGC‑CCATGGAGCAGGCACTGAACGAGTTTCTGACGGACAAGGCCGAg < 2:941623/132‑1 (MQ=255) aTGAGTATTGCCCACCACACCACCAAGACTGCGTTACTGGTGGACTTCGACCTGCGCCGGCCCAAGGTCGGCAGTTACCTGGGCCTGC‑CCATGGAGCAGGCACTGAACGAGTTTCTGACGGACAAGGCCGAGTTGCAGGACTGCCTGGTc < 1:2407149/150‑1 (MQ=255) aTGAGTATTGCCCACCACACCACCAAGACTGCGTTACTGGTGGACTTCGACCTGCGCCGGCCCAAGGTCGGCAGTTACCTGGGCCTGC‑CCATGGAGCAGGCACTGAACGAGTTTCTGACGGACAAGGCCGAGTTGCAGGACTGCCTGGTc > 1:235465/1‑150 (MQ=255) tGAGTATTGCCCACCACACCACCAAGACTGCGTTACTGGTGGACTTCGACCTGCGCCGGCCCAAGTTCGGCACTTACCTGGGCCTGC‑CCATGGAGCAGGCACTGAACGAGTTTCTGACGGACAAGGCCGAGTTGCAGGACTTCCTGGTCa > 2:303689/1‑150 (MQ=255) tATTGCCCACCACACCACCAAGACTGCGTTACTGGTGGACTTCGACCTGCGCCGGCCCAAGGTCGGCAGTTACCTGGGCCTGCTCCATGG‑GCAGGccca > 1:259360/1‑96 (MQ=255) tATTGCCCACCACACCACCAAGACTGCGTTACTGGTGGACTTCGACCTGCGCCGGCCCAAGGTCGGCAGTTACCTGGGCCTGCTCCATGG‑GCAGGccca < 2:259360/99‑4 (MQ=255) tATTGCCCACCACACCACCAAGACTGCGTTACTGGTGGACTTCGACCTGCGCCGGCCCAAGGTCGGCAGTTACCTGGGCCTGC‑CCATGGAGCAGGCACTGAACGAGTTTCTGACGGACAAGGCCGAGTTGCAGGACTGCCTGGTCAAccc > 2:204858/1‑150 (MQ=255) ttGCCCACCACACCACCAAGACTGCGTTACTGGTGGACTTCGACCTGCGCCGGCCCAAGGTCGGCAGTTACCTGGGCCTGC‑CCATGGAGCAGGCACTGAACGAGTTTCTGACGGACAAGGCCGAGTTGCAGGACTGc > 1:1046498/1‑137 (MQ=255) ttGCCCACCACACCACCAAGACTGCGTTACTGGTGGACTTCGACCTGCGCCGGCCCAAGGTCGGCAGTTACCTGGGCCTGC‑CCATGGAGCAGGCACTGAACGAGTTTCTGACGGACAAGGCCGAGTTGCAGGACTGc < 2:1046498/137‑1 (MQ=255) tGCCCACCACACCACCAAGACTGCGTTACTGGTGGACTTCGACCTGCGCCGGCCCAAGGTCGGCAGTTACCTGGGCCTGC‑CCATGGAGCAGGCACTGAACGAGTTTCTGACGGACAAGGCCGAGTTGCAGGACTGCCTGGTCAACCCCAc > 2:777072/1‑150 (MQ=255) cccACCACACCACCAAGACTGCGTTACTGGTGGACTTCGACCTGCGCCGGCCCAAGGTCGGCAGTTACCTGGGCCTGC‑CCATGGAGCAGGCACTGAACGAGTTTCTGACGGACAAGGCCGAGTTGCAGGACTGCCTg < 1:330493/137‑1 (MQ=255) cccACCACACCACCAAGACTGCGTTACTGGTGGACTTCGACCTGCGCCGGCCCAAGGTCGGCAGTTACCTGGGCCTGC‑CCATGGAGCAGGCACTGAACGAGTTTCTGACGGACAAGGCCGAGTTGCAGGACTGCCTg > 2:330493/1‑137 (MQ=255) cccACCACACCACCAAGACTGCGTTACTGGTGGACTTCGACCTGCGCCGGCCCAAGGTCGGCAGTTACCTGGGCCTGC‑CCATGGAGCAGGCACTGAACGAGTTTCTGACGGACAAGGCCGAGTTGCAGGACTGCCTGGTCAACCCCACCt > 2:1393930/1‑150 (MQ=255) ccaccaCACCACCAAGACTGCGTTACTGGTGGACTTCGACCTGCGCCGGCCCAAGGTCGGCAGTTACCTGGGCCTGC‑CCATGGAGCAGGCACTGAACGAGTTTCTGACGGACAAGGCCGAGTTGCAGGACTGCCTGGTCAACCCCACCtt > 2:2214758/1‑150 (MQ=255) accacaccacCAAGACTGCGTTACTGGTGGACTTCGACCTGCGCCGGCCCAAGGTCGGCAGTTACCTGGGCCTGC‑CCATGGAGCAGGCACTGAACGAGt > 1:997197/1‑99 (MQ=255) accacaccacCAAGACTGCGTTACTGGTGGACTTCGACCTGCGCCGGCCCAAGGTCGGCAGTTACCTGGGCCTGC‑CCATGGAGCAGGCACTGAACGAGTTTCTGACGGACAAGGCCGAGTTGCAGGACTGCCTGGTCAACCCCACCTTGc > 1:1514468/1‑150 (MQ=255) accacaccacCAAGACTGCGTTACTGGTGGACTTCGACCTGCGCCGGCCCAAGGTCGGCAGTTACCTGGGCCTGC‑CCATGGAGCAGGCACTGAACGAGTTTCTGACGGACAAGGCCGAGTTGCAGGACTGCCTGGTCAACCCCACCTTGc > 2:1905293/1‑150 (MQ=255) acaccacCAAGACTGCGTTACTGGTGGACTTCGACCTGCGCCGGCCCAAGGTCGGCAGTTACCTGGGCCTGC‑CCATGGAGCAGGCACTGAACGAGTTTCTGACGGACAAGGCCGAGTTGCAGGACTGCCTGGTCAACCCCACCTTGCcgc < 1:935866/150‑1 (MQ=255) aCTGCGTTACTGGTGGACTTCGACCTGCGCCGGCCCAAGGTCGGCAGTTACCTGGGCCTGC‑CCATGGAGCAGGCACTGAACGAGTTTCTGACGGACAAGGCCGAGTTGCAGGACTGCCTGGTCAACCCCa < 2:59316/130‑1 (MQ=255) aCTGCGTTACTGGTGGACTTCGACCTGCGCCGGCCCAAGGTCGGCAGTTACCTGGGCCTGC‑CCATGGAGCAGGCACTGAACGAGTTTCTGACGGACAAGGCCGAGTTGCAGGACTGCCTGGTCAACCCCa > 1:59316/1‑130 (MQ=255) gCGTTACTGGTGGACTTCGACCTGCGCCGGCCCAAGGTCGGCAGTTACCTGGGCCTGC‑CCATGGAGCAGGCTCTGAACGAGTTTCTGACGGACAAGGCCGAGTTGCAGGACTGCCTGGTCAACCCCACCTTGCCGCGCTTCGTGGtgctg < 2:300260/150‑1 (MQ=255) aCTGGTGGACTTCGACCTGCGCCGGCCCAAGGTCGGCAGTTACCTGGGCCTGC‑CCATGGAGCAGGCACTGAACGAGTTTCTGACGGACAAGGCCGAGTTGCAGGACTGc < 1:445184/109‑1 (MQ=255) aCTGGTGGACTTCGACCTGCGCCGGCCCAAGGTCGGCAGTTACCTGGGCCTGC‑CCATGGAGCAGGCACTGAACGAGTTTCTGACGGACAAGGCCGAGTTGCAGGACTGc > 2:445184/1‑109 (MQ=255) tggtggACTTCGACCTGCGCCGGCCCAAGGTCGGCAGTTACCTGGGCCTGC‑CCATGGAGCAGGCACTGAACGAGTTTCTGACGGACAAGGCCGAGTTGCAGGACTGCCTGGTCAACCCCACCTTGCCGCGCTTCGTGGTGCTGCCAAcgc > 1:2080733/1‑150 (MQ=255) tggtggACTTCGACCTGCGCCGGCCCAAGGTCGGCAGTTACCTGGGCCTGC‑CCATGGAGCAGGCACTGAACGAGTTTCTGACGGACAAGGCCGAGTTGCAGGACTGCCTGGTCAACCCCACCTTGCCGCGCTTCGTGGTGCTGCCAAcgc < 1:2214758/150‑1 (MQ=255) gtggACTTCGACCTGCGCCGGCCCAAGGTCGGCGGTCAGCTGGTCCTGC‑CCATGGAGCAGGCACTGAACGAGTTTCTGACGGACAAGGCCGAGTTGCAGGACTGCCTGGTCAACCCCACCTTGCCGCGCTTCGTGGTGCTGCCAACGCgg < 2:2000147/150‑1 (MQ=255) gtggACTTCGACCTGCGCCGGCCCAAGGTCGGCAGTTACCTGGGCCTGC‑CCATGGAGCAGGCACTGAACGAGTTTCTGACGGACAAGGCCGAGTTGCa > 1:1334121/1‑98 (MQ=255) gtggACTTCGACCTGCGCCGGCCCAAGGTCGGCAGTTACCTGGGCCTGC‑CCATGGAGCAGGCACTGAACGAGTTTCTGACGGACAAGGCCGAGTTGCa < 2:1334121/98‑1 (MQ=255) gtgaACGTCGACCTGCGCCGGCCCAAGGTCGGCAGTTACCTGGGCCTGC‑CCATGGAGCAGGCACTGAACGAGTTTCTGACGGACAAGGCCGAGTTGCAGGACTGCCTGGTCAACCCCACCTTGCCGCGCTTCGTGGTACTGCCAACGCgg > 2:602613/1‑150 (MQ=255) ttCGACCTGCGCCGGCCCAAGGTCGGCAGTTACCTGGGCCTGC‑CCATGGAGCAGGCa < 2:2246933/57‑1 (MQ=255) ttCGACCTGCGCCGGCCCAAGGTCGGCAGTTACCTGGGCCTGC‑CCATGGAGCAGGCa > 1:2246933/1‑57 (MQ=255) ccTGCGCCGGCCCAAGGTCGGCAGTTACCTGGGCCTGC‑CCATGGAGCAGGCACTGAACGAGTTTCTGACGGACAAGGCCGAGTTGCAGGACTGCCTGGTCAACCCCACCTTGCCGCGCTTCGTGGTACTGCCAACGCGGGTACCCGTGcc < 1:602613/150‑1 (MQ=255) ccGGCCCAAGGTCGGCAGTTACCTGGGCCTGC‑CCATGGAGCAGGCACTGAACGAGTTTCTGACGGACAAGGCCGAGTTGCAGGACTGCCTGGTCAACCCCACGTTGCCGCGCTTCGTGGTGCTGCCAACGCGGGTACCCGTGCCCCTGTc > 1:759432/1‑150 (MQ=255) ccGGCCCAAGGTCGGCAGTTACCTGGGCCTGC‑CCATGGAGCAGGCACTGAACGAGTTTCTGACGGACAAGGCCGAGTTGCAGGACTGCCTGGTCAACCCCACCTTGc < 2:492694/107‑1 (MQ=255) ccGGCCCAAGGTCGGCAGTTACCTGGGCCTGC‑CCATGGAGCAGGCACTGAACGAGTTTCTGACGGACAAGGCCGAGTTGCAGGACTGCCTGGTCAACCCCACCTTGc > 1:492694/1‑107 (MQ=255) gCCCAAGGTCGGCAGTTACCTGGGCCTGC‑CCATGGAGCAGGCACTGAACGAGTTTCTGACGGACAAGGCCGAGTTGCAGGACTGCCTGGTCAACCCCACCTTGCCGCGCTTCGTGGTGCTGCCAACGCGGGTACCCGTGCCCCTGTCGAc < 2:296087/150‑1 (MQ=255) cAAGGTCGGCAGTTACCTGGGCCTGC‑CCATGGAGCAGGCACTGAACGAGTTTCTGACGGACAAGGCCGAGTTGCAGGACTGCCTGGTCAACCCCACCTTGCCGCGCTTCGTGGTGCTGCCAACGCGGGTACCCGTGCCCCTGTCGACCga < 1:1905293/150‑1 (MQ=255) cAAGGTCGGCAGTTACCTGGGCCTGC‑CCATGGAGCAGGCACTGAACGAGTTTCTGACGGACAAGGCCGAGTTGCAGGACTGCCTGGTCAACCCCACCTTGCCGCGCTTCGTGGTGCTGCCAACGCGGGTACCCGTGCCCCTGTCGACCga > 2:922651/1‑150 (MQ=255) aGGTCGGCAGTTACCTGGGCCTGC‑CCATGGAGCAGGCACTGAACGAGTTTCTGACGGACAAGGCCGAGTTGCAGGACTGCCTGGTCAACCCCACCTTGCCGCGCTTCGTGGTGCTGCCAACGCGGGTACCCGTGCCCCTGTCGACCgaga < 1:1393930/150‑1 (MQ=255) tCGGCAGTTACCTGGGCCTGC‑CCATGGAGCAGGCACTGAACGAGTTTCTGACGGACAAGGCCGAGTTGCAGGACTGCCTGGTCAACCCCACCTTGCCGCGCTTCGTGGTGCTGCCAACGCGGGTACCCGTGCCCCTGTCGACCGAGATGc > 2:204362/1‑150 (MQ=255) ggCAGTTACCTGGGCCTGC‑CCATGGAGCAGGCACTGAACGAGTTTCTGACGGACAAGGc > 1:1800615/1‑59 (MQ=255) ggCAGTTACCTGGGCCTGC‑CCATGGAGCAGGCACTGAACGAGTTTCTGACGGACAAGGc < 2:1800615/59‑1 (MQ=255) ggCAGTTACCTGGGCCTGC‑CCATGGAGCAGGCACTGAACGAGTTTCTGACGGACAAGGCCGa > 1:1140744/1‑62 (MQ=255) gCAGTTACCTGGGCCTGC‑CCATGGAGCAGGCACTGAACGAGTTTCTGACGGACAAGGCCGAGTTGCAGGACTGCCTGGTCAACCCCACCTTGCCGCGCTTCGTGGTGCTGCCAACGCGGGTACCCGTGCCCCTGTCGACCGAGATGCTGt < 2:235465/150‑1 (MQ=255) cAGTTACCTGGGCCTGC‑CCATGGAGCAGGCACTGAACGAGTTTCTGACGGACAAGGCCGAGTTGCAGGACTGCCTGGTCAACCCCACCTTGCCGCGCTTCGTGGTGCTGCCAACGCGGGTACCCGTGCCCCTGTCGACCGAGATGCTGTc < 2:1514468/150‑1 (MQ=255) aGTTACCTCGTCCTGC‑CTATGTATCAGTCACTGAACTAGTTTCTGACGGACAAGGCCTAGTTGCATGACTGCCTGCTCAACCCAACCTTGCCTCTCTTCGTGGTCCTGCCAACGCGGGTACCCGTGCCCCTGTCGACCGAGATGCTGTcc < 2:314326/150‑1 (MQ=255) ttACCTGGGCCTGC‑CCATGGAGCAGGCACTGAACGAGTTTCTGACGGACAAGGCCGAGTTGCAGGACTGCCTGGTCAACCCCACCTTGCCGCGCTTCGTGGTGCTGCCAACGCGGGTACCCGTGCCCCTGTCGACCGAGATGCTGTCCTc < 1:777072/150‑1 (MQ=255) ttcagtgCCTGCTCCATGG‑GCAGGCCCTGAACGAGTTTCTGACGGACAAGGCCGAGTTGCAGGACTGCCTGGTCAACCCCACCTTGCCGCGCTTCGTGGTGCTGCCAACGCGGGTACCCGTGCCCCTGt > 2:322829/7‑129 (MQ=255) ccTGGGCCTGC‑CCATGGAGCAGGCACTGAACGAGTTTCTGACGGACAAGGCCGAGTTGCAGGACTGCCTGGTCAACCCCACCTTGCCGCGCTTCGTGGTGCTGCCAACGCGGGTACCCGTGccc > 2:1465223/1‑124 (MQ=255) ccTGGGCCTGC‑CCATGGAGCAGGCACTGAACGAGTTTCTGACGGACAAGGCCGAGTTGCAGGACTGCCTGGTCAACCCCACCTTGCCGCGCTTCGTGGTGCTGCCAACGCGGGTACCCGTGccc < 1:1465223/124‑1 (MQ=255) ggCCTGC‑CCATGGAGCAGGCACTGAACGAGTTTCTGACGGACAAGGCCGAGTTGCAGGACTGCCTGGTCAACCCCACCTTGCCGCGCTTCGTGGTGCTGCCAACGCGGGTACCCGTGCCCCTGTCGACCGAGATGCTGTCCTCGCCCAAg < 2:888654/150‑1 (MQ=255) ccTGC‑CCATGGAGCAGGCACTGAACGAGTTTCTGACGGACAAGGCCGAGTTGCAGGACTGCCTGGTCAACCCCACCTTGCCGCGCTTCGTGGTGCTGCCAACGCGGGTACCCGTGCCCCTGTCGACCGAGATGCTGTCCTCGCCCAAGGt < 2:538798/150‑1 (MQ=255) cTGC‑CCATGGAGCAGGCACTGAACGAGTTTCTGACGGACAAGGCCGAGTTGCAGGACTGCCTGGTCAACCCCACCTTGCCGCGCTTCGTGGTGCTGCCAACGCGGGTACCCGTGCCCCTGTCGACCGAGAAGCTGTCCTCGCCCAAgtgg > 2:1946328/1‑147 (MQ=255) c‑ccATGGAGCAGGCACTGAACGAGTTTCTGACGGACAAGGCCGAGTTGCAGGACTGCCTGGTCAACCCCACCTTGCCGCGCTTCGTGGTGCTGCCAACGCGGGTACCCGTGCCCCTGTCGACCGAGATGCTGTCCTCGCCCAAg > 2:2090496/1‑144 (MQ=255) c‑ccATGGAGCAGGCACTGAACGAGTTTCTGACGGACAAGGCCGAGTTGCAGGACTGCCTGGTCAACCCCACCTTGCCGCGCTTCGTGGTGCTGCCAACGCGGGTACCCGTGCCCCTGTCGACCGAGATGCTGTCCTCGCCCAAg < 1:2090496/144‑1 (MQ=255) ccATGGAGCAGGCACTGAACGAGTTTCTGACGGACAAGGCCGAGTTGCAGGACTGCCTGGTCAACCCCACCTTGCCGCGCTTCGTGGTGCTGCCAACGCGGGTACCCGTGCCCCTGTCGACCGAGATGCt < 2:430879/130‑1 (MQ=255) ccATGGAGCAGGCACTGAACGAGTTTCTGACGGACAAGGCCGAGTTGCAGGACTGCCTGGTCAACCCCACCTTGCCGCGCTTCGTGGTGCTGCCAACGCGGGTACCCGTGCCCCTGTCGACCGAGATGCt > 1:430879/1‑130 (MQ=255) aTGGAGCAGGCACTGAACGAGTTTCTGACGGACAAGGCCGAGTTGCAGGACTGCCTGGTCAACCCCACCTTGCCGCGCTTCGTGGTGCTGCCAACGCGGGTACCCGTGCCCCTGTCGACCGAGAt > 2:2349097/1‑125 (MQ=255) gAGCAGGCACTGGACGAGTATCTGACGGACAAGGCCGAGTTGCAGGACTGCCTGGTCAACCCCACCTTGCCGCGCTTCGTGGTGCTGCCAACGCGGGTACCCGTGCCCCTGTCGACCAAGATGCTGTCGTCGCCCAAGGTGAACAACCTg > 2:856257/1‑150 (MQ=255) gAGCAGGCACTGAACGAGTTTCTGACGGACAAGGCCGAGTTGCAGGACTGCCTGGTCAACCCCACCTTGCCGCGCTTCGTGGTGCTGCCAACGCGGGTACCCGTGccc < 1:36965/108‑1 (MQ=255) | CACCTCGCCAACGCCGGAAGCGGGCAAGACCATGCTGGCGATCAACCTGGCCATGAGTATTGCCCACCACACCACCAAGACTGCGTTACTGGTGGACTTCGACCTGCGCCGGCCCAAGGTCGGCAGTTACCTGGGCCTGC‑CCATGGAGCAGGCACTGAACGAGTTTCTGACGGACAAGGCCGAGTTGCAGGACTGCCTGGTCAACCCCACCTTGCCGCGCTTCGTGGTGCTGCCAACGCGGGTACCCGTGCCCCTGTCGACCGAGATGCTGTCCTCGCCCAAGGTGAACAACCTG > NC_002947/3541206‑3541500 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |