| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 3,938,979 | Δ1 bp | 5.2% | intergenic (+139/+43) | PP_3471 → / ← csgG | hypothetical protein/curli production assembly/transport protein CsgG |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 3,938,979 | 0 | A | . | 5.2% | 254.6 / 6.8 | 77 | intergenic (+139/+43) | PP_3471/csgG | hypothetical protein/curli production assembly/transport protein CsgG |
| Reads supporting (aligned to +/- strand): ref base A (36/37); new base . (2/2); total (38/39) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.57e-01 | |||||||||||
AACTCAATGAAAGCCGATCGCCTAGCCGGTAGCTTATACTATTGCCTGCATCGAATAAGCTAAAGTCTCGAAATGCTTTAGGAAAACTCCAATCAAGTTGCCCGAAACCTGAAATTAGCAATGTTTTCAAGAAAATTCAGCACAGGTCAGGCGG‑CCTGTGCTGAATTGATCAGAGCTTCCCTAACAGTCAATCACGGCTGCTGATTCTGGCTCAAGAACTTGTCCACCGTGGCTTTGCCATCAGCTGGATCCCCCGCCACCTGCCACAACCGCCGCTCGATCCCCTGCGCCAG > NC_002947/3938831‑3939123 | aaCTCAATGAAAGCCGATCGCCTAGCCGGTAGCTTATACTATTGCCTGCATCGAATAAGCTAAAGTCTCGAAATGCTTTAGGAAAACTCCAATCAAGTTGCCCGAAACCTGAAATTAGCAATGTTTTCAAGAAAATTCAGCACAGGTCAg < 2:971277/150‑1 (MQ=255) aTGAAAGCCGATCGCCTAGCCGGTAGCTTATACTATTGCCTGCATCGAATAAGCTAAAGTCTCGAAATGCTTTAGGAAAACTCCAATCAAGTTGCCCGAAACCTGAAATTAGCAATGTTTTCAAGAAAATTCAGCACAGGTCAGGCGG‑cc > 1:1963246/1‑150 (MQ=255) aaaGCCGATCGCCTAGCCGGTAGCTTATACTATTGCCTGCATCGAATAAGCTAAAGTCTCGAAATGCTTTAGGAAAACTCCAATCAAGTTGCCCGAAACCTGAAATTAGCAATGTTTTCAAGAAAATTCAGCACAGGTCAGGCGG‑CCtgt > 2:1890408/1‑150 (MQ=255) cGATCGCCTAGCCGGTAGCTTATACTATTGCCTGCATCGAATAAGCTAAAGTCTCGAAATGCTTTAGGAAAACTCCAATCAAGTTGCCCGAAACCTGAAATTAGCAATGTTTTCAAGAAAATTCAGCACAGGTCAGGCGG‑CATGTGCTGa > 1:111552/1‑150 (MQ=255) tCGCCTAGCCGGTAGCTTATACTATTGCCTGCATCGAATAAGCTAAAGTCTCGAAATGCTTTAGGAAAACTCCAATCAAGTTGCCCGAAACCTGAAATTAGCAATGTTTTCAAGAAAATTCAGCACAGGTCAGGCGG‑CCTGTGCTGAAtt < 1:1947537/150‑1 (MQ=255) ccTAGCCGGTAGCTTATACTATTGCCTGCATCGAATAAGCTAAAGTCTCGAAATGCTTTAGGAAAACTCCAATCAAGTTGCCCGAAACCTGAAATTAGCAATGTTTTCAAGAAAATTCAGCACAGGTCAGGCGG‑CCTGTGCTGAATTGAt > 1:2325189/1‑150 (MQ=255) cTAGCCGGTAGCTTATACTATTGCCTGCATCGAATAAGCTAAAGTCTCGAAATGCTTTAGGAAAACTCCAATCAAGTTGCCCGAAACCTGAAATTAGCAATGTTTTCAAGAAAATTCAGCACAGGTCAGGCGG‑CCTGTGCTGAATTGATc < 2:1963246/150‑1 (MQ=255) tAGCCGGTAGCTTATACTATTGCCTGCATCGAATAAGCTAAAGTCTCGAAATGCTTTAGGAAAACTCCAATCAAGTTGCCCGAAACCTGAAATTAGCAATGTTTTCAAGAAAATTCAGCACAGGTCAGGCGG‑CCTGTGCTGAATTGATCa > 2:1067440/1‑150 (MQ=255) aggaaGCTTATACTATTGCCTGCATCGAATAAGCTAAAGTCTCGAAATGCTTTAGGAAAACTCCAATCAAGTTGCCCGAAACCTGAAATTAGCAATGTTTTCAAGAAAATTCAGCACAGGTCAGGCGG‑CCTGTGCTGAATTGATCAGAGc > 2:1945704/5‑150 (MQ=255) aGCTTATACTATTGCCTGCATCGAATAAGCTAAAGTCTCGAAATGCTTTAGGAAAACTCCAATCAAGTTGCCCGAAACCTGAAATTAGCAATGTTTTCAAGAAAATTCAGCACAGGTCAGGCGG‑CCTGTGCTGAATTGATCAGAGCTTcc < 1:1890408/150‑1 (MQ=255) ttATACTATTGCCTGCATCGAATAAGCTAAAGTCTCGAAATGCTTTAGGAAAACTCCAATCAAGTTGCCCGAAACCTGAAATTAGCAATGTTTTCAAGAAAATTCAGCACAGGTCAGGCGG‑CCt < 2:1636550/124‑1 (MQ=255) ttATACTATTGCCTGCATCGAATAAGCTAAAGTCTCGAAATGCTTTAGGAAAACTCCAATCAAGTTGCCCGAAACCTGAAATTAGCAATGTTTTCAAGAAAATTCAGCACAGGTCAGGCGG‑CCt < 1:807745/124‑1 (MQ=255) ttATACTATTGCCTGCATCGAATAAGCTAAAGTCTCGAAATGCTTTAGGAAAACTCCAATCAAGTTGCCCGAAACCTGAAATTAGCAATGTTTTCAAGAAAATTCAGCACAGGTCAGGCGG‑CCt > 1:1636550/1‑124 (MQ=255) ttATACTATTGCCTGCATCGAATAAGCTAAAGTCTCGAAATGCTTTAGGAAAACTCCAATCAAGTTGCCCGAAACCTGAAATTAGCAATGTTTTCAAGAAAATTCAGCACAGGTCAGGCGG‑CCt > 2:807745/1‑124 (MQ=255) tATTGCCTGCATCGAATAAGCTAAAGTCTCGAAATGCTTTAGGAAAACTCCAATCAAGTTGCCCGAAACCTGAAATTAGCAATGTTTTCAAGAAAATTCAGCACAGGTCAggcgg‑c > 1:913371/1‑116 (MQ=255) tATTGCCTGCATCGAATAAGCTAAAGTCTCGAAATGCTTTAGGAAAACTCCAATCAAGTTGCCCGAAACCTGAAATTAGCAATGTTTTCAAGAAAATTCAGCACAGGTCAggcgg‑c < 2:913371/116‑1 (MQ=255) tATTGCCTGCATCGAATAAGCTAAAGTCTCGAAATGCTTTAGGAAAACTCCAATCAAGTTGCCCGAAACCTGAAATTAGCAATGTTTTCAAGAAAATTCAGCACAGGTCAgg < 1:888943/112‑1 (MQ=255) tATTGCCTGCATCGAATAAGCTAAAGTCTCGAAATGCTTTAGGAAAACTCCAATCAAGTTGCCCGAAACCTGAAATTAGCAATGTTTTCAAGAAAATTCAGCACAGGTCAgg > 2:888943/1‑112 (MQ=255) gCCTGCATCGAATAAGCTAAAGTCTCGAAATGCTTTAGGAAAACTCCAATCAAGTTGCCCGAAACCTGAAATTAGCAATGTTTTCAAGAAAATTCAGCACAGGTCAGGCGG‑CCTGTGCTGAATTGATCAGAGCTTCCCTAACAGTCAATc < 1:1067440/150‑1 (MQ=255) ccTGCATCGAATAAGCTAAAGTCTCGAAATGCTTTAGGAAAACTCCAATCAAGTTGCCCGAAACCTGAAATTAGCAATGTTTTCAAGAAAATTCAGCACAGGTCAGGCGG‑CCTGTGCTGAATTGATCAGAGCTTCCCTAACAGTCAATCa > 1:1777931/1‑150 (MQ=255) ccTGCATCGAATAAGCTAAAGTCTCGAAATGCTTTAGGAAAACTCCAATCAAGTTGCCCGAAACCTGAAATTAGCAATGTTTTCAAGAAAATTCAGCACAGGTCAGGCGG‑CCTGTGCTGAATTGATCAGAGCTTCCCTAACAGTCAATCa > 2:1612842/1‑150 (MQ=255) gCATCGAATAAGCTAAAGTCTCGAAATGCTTTAGGAAAACTCCAATCAAGTTGCCCGAAACCTGAAATTAGCAATGTTTTCAAGAAAATTCAGCACAGGTCAGGCGG‑CCTGTGCTGAATTGATCAGAGCTTCCCTAACAGTCaa > 2:2203278/1‑144 (MQ=255) gCATCGAATAAGCTAAAGTCTCGAAATGCTTTAGGAAAACTCCAATCAAGTTGCCCGAAACCTGAAATTAGCAATGTTTTCAAGAAAATTCAGCACAGGTCAGGCGG‑CCTGTGCTGAATTGATCAGAGCTTCCCTAACAGTCaa < 1:2203278/144‑1 (MQ=255) gCATCGAATAAGCTAAAGTCTCGAAATGCTTTAGGAAAACTCCAATCAAGTTGCCCGAAACCTGAAATTAGCAATGTTTTCAAGAAAATTCAGCACAGGTCAGGCGG‑CCTGTGCTGAATTGATCAGAGCTTCCCTAACAGTCAATCACgg < 2:463349/150‑1 (MQ=255) cATCGAATAAGCTAAAGTCTCGAAATGCTTTAGGAAAACTCCAATCAAGTTGCCCGAAACCTGAAATTAGCAATGTTTTCAAGAAAATTCAGCACAGGTCAGGCGG‑CCTGTGCTGAATTGATCAGAGCTTCCCTAACAGTCAATCACGgc > 1:445924/1‑150 (MQ=255) cGAATAAGCTAAAGTCTCGAAATGCTTTAGGAAAACTCCAATCAAGTTGCCCGAAACCTGAAATTAGCAATGTTTTCAAGAAAATTCAGCACAGGTCAGGCGG‑CCTGTGCTGAATTGATCAGAGCTTCCCTAACAGTCAAACCCGgctgc < 2:836468/150‑1 (MQ=255) aaTAAGCTAAAGTCTCGAAATGCTTTAGGAAAACTCCAATCAAGTTGCCCGAAACCTGAAATTAGCAATGTTTTCAAGAAAATTCAGCACAGGTCAGGCGG‑CCTGTGCTGAATTGATCAGAGCTTCCCTAACAGTCAATCACGGctgctg > 2:2076349/1‑150 (MQ=255) aaTAAGCTAAAGTCTCGAAATGCTTTAGGAAAACTCCAATCAAGTTGCCCGAAACCTGAAATTAGCAATGTTTTCAAGAAAATTCAGCACAGGTCAGGCGG‑CCTGTGCTGAATTGATCAGAGCTTCCCTAACAGTCAATCACGGctgctg > 2:201963/1‑150 (MQ=255) aaTAAGCTAAAGTCTCGAAATGCTTTAGGAAAACTCCAATCAAGTTGCCCGAAACCTGAAATTAGCAATGCTTTCAAGAAAATTCAGCACAGGTCAGGCGG‑CCTGTGCTGAATTGATCAGAGCTTCCCTAACAGTCAATCACGGctgctg > 2:1308855/1‑150 (MQ=255) tAAGCTAAAGTCTCGAAATGCTTTAGGAAAACTCCAATCAAGTTGCCCGAAACCTGAAATTAGCAATGTTTTCAAGAAAATTCAGCACAGGTCAGGCGG‑CCTGTGCTGAATTGATCAGAGCTTCCCTAACAGTCAATCACGGCTGCTGAt > 2:166755/1‑150 (MQ=255) aGCTAAAGGCTGCAAATGCGTTAGGAAAACTCCAATCAAGTTGCCCGAAACTTGAAATTAGCAATGTTTTCAAGAAAATTCAGCACAGGTCAGGCGG‑CCGGTGCGGAATTGATCAGAGCTTCCCTAACAGTCAATCGCGGCTGCTGATTc < 2:111552/150‑1 (MQ=255) gCTAAAGTCTCGAAATGCTTTAGGAAAACTCCAATCAAGTTGCCCGAAACCTGCATTCAGCAATGTTTTCAAGAAAATTCAGCACAGGTCAGGCGG‑CCTGTGCTGAATTGATCAGAGCTTCCCTAACAGTCAATCACGGCTGCTGATTCt < 1:25253/150‑1 (MQ=255) tAAAGTCTCGAAATGCTTTAGGAAAACTCCAATCAAGTTGCCCGAAACCTGAAATTAGCAATGTTTTCAAGAAAATTCAGCACAGGTCAGGCGG‑CCTGTGCTGAATTGATCAGAGCTTCCCTAACAGTCAATCACGGCTGCTGATTCTgg < 1:201963/150‑1 (MQ=255) tctcGAAATGCTTTAGGAAAACTCCAATCAAGTTGCCCGAAACCTGAAATTAGCAATGTTTTCAAGAAAATTCAGCACAGGTCAGGCGG‑CCTGTGCTGAATTGATCAGAGCTTCCCTAACAGTCAATCACGGCTGCTGATTCTGGCTCaa > 2:1604082/1‑150 (MQ=255) ctcGAAATGCTTTAGGAAAACTCCAATCAAGTTGCCCGAAACCTGAAATTAGCAATGTTTTCAAGAAAATTCAGCACAGGTCAGGCGG‑CCTGTGCTGAATTGATCAGAGCTTCCCTAACa < 2:67055/120‑1 (MQ=255) ctcGAAATGCTTTAGGAAAACTCCAATCAAGTTGCCCGAAACCTGAAATTAGCAATGTTTTCAAGAAAATTCAGCACAGGTCAGGCGG‑CCTGTGCTGAATTGATCAGAGCTTCCCTAACa > 1:67055/1‑120 (MQ=255) tcGAAATGCTTTAGGAAAACTCCAATCAAGTTGCCCGAAACCTGAAATTCGCAAGGTTTTCAAGAAAATTCAGCACAGGTCAGGCGG‑CCTGTGCTGAATTGGTCAGAGCTTCCCTAACAGTCAATCACGGCTGCTGATTCTGGCTCAAGa > 1:1267522/1‑150 (MQ=255) aaTGCTTTAGGAAAACTCCAATCAAGTTGCCCGAAACCTGAAATTAGCAATGTTTTCAAGAAAATTCAGCACAGGTCAGGCGG‑CCTGTGCTGAATTGATCAGAGCTTCCCTAACAGTCAATCACGGCTGCTGATTCTGGCTCAAGAACtt < 2:1777931/150‑1 (MQ=255) aaTGCTTTAGGAAAACTCCAATCAAGTTGCCCGAAACCTGAAATTAGCAATGTTTTCAAGAAAATTCAGCACAGGTCAGGCGG‑CCTGTGCTGAATTGATCAGAGCTTCCCTAACAGTCAATCACGGCTGCTGATTCTGGCTCAAGAACtt < 2:2325189/150‑1 (MQ=255) aTGCTTTAGGAAAACTCCAATCAAGTTGCCCGAAACCTGAAATTAGCAATGCTTTCAAGAAAATTCAGCACAGGTCAGGCGG‑CCTGTGCTGAATTGATCAGAGCTTCCCTAACAGTCAATCACGGCTGCTGATTCTGGCTCAAGAACTTg < 1:1308855/150‑1 (MQ=255) gCTTTAGGAAAACTCCAATCAAGTTGCCCGAAACCTGAAATTAGCAATGTTTTCAAGAAAATTCAGCACAGGTCAGGCGG‑CCTGTGCTGAATTGATCAGAGCTTCCCTAACAGTCAATCACGGCTGCTGATTCTGGCTCAAGAACTTGTc < 2:445924/150‑1 (MQ=255) tttAGGAAAACTCCAATCAAGTTGCCCGAAACCTGAAATTAGCAATGTTTTCAAGAAAATTCAGCACAGGTCAGGCGG‑CCTGTGCTGAATTGATCa < 2:126336/96‑1 (MQ=255) tttAGGAAAACTCCAATCAAGTTGCCCGAAACCTGAAATTAGCAATGTTTTCAAGAAAATTCAGCACAGGTCAGGCGG‑CCTGTGCTGAATTGATCa > 1:126336/1‑96 (MQ=255) aGGAAAACTCCAATCAAGTTGCCCGAAACCTGAAATTAGCAATGTTTTCAAGAAAATTCAGCACAGGTCAGGCGG‑CCTGTGCTGAATTGATCAGAGCTTCCCTAACAGTCAATCACGGCTGCTGATTCTGGCTCAAGAACTTGTCCACCg < 2:1915902/150‑1 (MQ=255) cTCCAATCAAGTTGCCCGAAACCTGAAATTAGCAATGTTTTCAAGAAAATTCAGCACAGGTCAGGCGG‑CCTGTGCTGAATTGATCAGAGCTTCCCTAACAGTCAATCACGGCTGCTGATTCTGGCTCAAGAACTTGTCCACCGTGGCttt > 1:694447/1‑150 (MQ=255) cTCCAATCAAGTTGCCCGAAACCTGAAATTAGCAATGTTTTCAAGAAAATTCAGCACAGGTCAGGCGG‑CCTGTGCTGAATTGATCAGAGCTTCCCTAACAGTCAATCACGGCTGCTGATTCTGGCTCAAGAACTTGTCCACCGTGGCttt > 2:1678212/1‑150 (MQ=255) cTCCAATCAAGTTGCCCGAAACCTGAAATTAGCAATGTTTTCAAGAAAATTCAGCACAGGTCAGGCGG‑CCTGTGCTGAATTGATCAGAGCTTCCCTAACAGTCAATCACGGCCGCTGATTCTGGCTCAAGAACTTGTCCACCGTGGCttt < 1:1945704/150‑1 (MQ=255) tCCAATCAAGTTGCCCGAAACCTGAAATTAGCAATGTTTTCAAGAAAATTCAGCACAGGTCAGGCGG‑CCTGTGc > 2:416414/1‑74 (MQ=255) tCCAATCAAGTTGCCCGAAACCTGAAATTAGCAATGTTTTCAAGAAAATTCAGCACAGGTCAGGCGG‑CCTGTGc < 1:416414/74‑1 (MQ=255) cAATCAAGTTGCCCGAAACCTGAAATTAGCAATGTTTTCAAGAAAATTCAGCACAGGTCAGGCGG‑CCTGTGCTGAATTGAt > 1:776565/1‑81 (MQ=255) cAATCAAGTTGCCCGAAACCTGAAATTAGCAATGTTTTCAAGAAAATTCAGCACAGGTCAGGCGG‑CCTGTGCTGAATTGAt < 2:776565/81‑1 (MQ=255) cAATCAAGTTGCCCGAAACCTGAAATTAGCAATGTTTTCAAGAAAATTCAGCACAGGTCAGGCGG‑CCTGTGCTGAATTGATCAGAGCTTCCCTAACAGTCAATCACGGCTGCTGATTCTGGCTCAAGAACTTGTCCACCGTGGCTTTGcc > 2:1344921/1‑150 (MQ=255) ccagaatcagcagccgtgattgactgttagggaagctctgatcAATTCAGCACAGGTCAGGCGG‑CCTGTGCTGCAtt < 1:782873‑M1/34‑1 (MQ=255) ccagaatcagcagccgtgattgactgttagggaagctctgatcAATTCAGCACAGGTCAGGCGG‑CCTGTGCTGAAtt > 2:782873‑M1/44‑77 (MQ=255) cAAGTTGCCCGAAACCTGAAATTAGCAATGTTTTCAAGAAAATTCAGCACAGGTCAGGCGG‑CCTGTGCTGAATTGATCAGAGCTTCCCTAACAGTCAATCACGGCTGCTGATTCTGGCTCAAGAACTTGTCCACCGTGGCTTTGCCATCa < 1:1604082/150‑1 (MQ=255) aaGTTGCCCGAAACCTGAAATTAGCAATGTTTTCAAGAAAATTCAGCACAGGTCAGGCGG‑CCTGTGCTGAATTGATCAGAGCTTCCCTAACAGTCAATCACGGCTGCTGATTCTGGCTCAAGAACTTGTCCACCGTGGCTTTGCCATCAg > 1:1578769/1‑150 (MQ=255) ttGCCCGAAACCTGAAATTAGCAATGTTTTCAAGAAAATTCAGCACAGGTCAGGCGG‑CCTGTGCTGAATTGATCAGAGCTTCCCTAACAGTCAATCACGGCTGCTGATTCTGGCTCAAGAACTTGTCCACCGTGGCTTTGCCATCAGCTg > 2:1434224/1‑150 (MQ=255) ccGAAACCTGAAATTAGCAATGTTTTCAAGAAAATTCAGCACAGGTCAGGCGG‑CCTGTGCTGAATTGATCAGAGCTTCCCTAACAGTCAATCACGgctgct < 2:1593496/101‑1 (MQ=255) ccGAAACCTGAAATTAGCAATGTTTTCAAGAAAATTCAGCACAGGTCAGGCGG‑CCTGTGCTGAATTGATCAGAGCTTCCCTAACAGTCAATCACGgctgct > 1:1593496/1‑101 (MQ=255) ccGAAACCTGAAATTAGCAATGTTTTCAAGAAAATTCAGCACAGGTCAGGCGG‑CCTGTGCTGAATTGATCAGAGCTTCCCTAACAGTCAATCACGGCTGCTGATTCTGGCTCAAGAACTTGTCCACCGTGGCTTTGCCATCAGCTGGa > 1:2071337/1‑148 (MQ=255) ccGAAACCTGAAATTAGCAATGTTTTCAAGAAAATTCAGCACAGGTCAGGCGG‑CCTGTGCTGAATTGATCAGAGCTTCCCTAACAGTCAATCACGGCTGCTGATTCTGGCTCAAGAACTTGTCCACCGTGGCTTTGCCATCAGCTGGa < 2:2071337/148‑1 (MQ=255) ccGAAACCTGAAATTAGCAATGTTTTCAAGAAAATTCAGCACAGGTCAGGCGG‑CCTGTGCTGAATTGATCAGAGCTTCCCTAACAGTCAATCACGGCTGCTGATTCTGGCTCAAGAACTTGTCCACCGTGGCTTTGCCATCAGCTGGATc > 2:1087414/1‑150 (MQ=255) aaCCTGAAATTAGCAATGTTTTCAAGAAAATTCAGCACAGGTCAGGCGG‑CCTGTGCTGAATTGATCAGAGCTTCCCTAACAGTCAATCACGGCTGCTGATTCTGGCTCAAGAACTTGTCCACCGTGGCTTTGCCATCAGCTGGATccccc < 2:694447/150‑1 (MQ=255) aaCCTGAAAGTAGCAATGTTTTCAAGAAAATTCAGCACAGGTCAGGCGG‑CCTGTGCTGAATTGATCAGACCTTCCCTAACAGTCAATCACGGCTGCTGATTCTGGCGCAAGAACTTGTCCCCCGTGGCTTTGCCATCAGCTGGATccccc < 1:196821/150‑1 (MQ=255) cTGAAATTAGCAATGTTTTCAAGAAAATTCAGCACAGGTCAGGCGG‑CCTGTGCTGAATTGATCAGAGCTTCCCTAACAGTCAATCACGGCTGCTGATTCTgg > 1:1039007/1‑102 (MQ=255) cTGAAATTAGCAATGTTTTCAAGAAAATTCAGCACAGGTCAGGCGG‑CCTGTGCTGAATTGATCAGAGCTTCCCTAACAGTCAATCACGGCTGCTGATTCTgg < 2:1039007/102‑1 (MQ=255) tGAAATTAGCAATGTTTTCAAGAAAATTCAGCACAGGTCAGGCGG‑CCTGTGCTGAATTGATCAGAGCTTCCCTAACAGTCAATCACAGCTGCTGATTCTAGCTCAAGAACTTGTCCACCGTGGCTTTGCCATCAGCTGGATCCCCCGCCa > 1:1367947/1‑150 (MQ=255) aaaTTAGCAATGTTTTCAAGAAAATTCAGCACAGGTCAGGCGG‑CCTGTGCTGAATTGATCAGAGCTTCCCTAACAGTCAATCACGGCTGCTGATTCTGGCTCAAGAACTTGTCCACCGTGGCTTTGCCATCAGCTGGATCCCCCGCCAcc > 1:1712887/1‑150 (MQ=255) aaTTAGCAATGTTTTCAAGAAAATTCAGCACAGGTCAGGCGG‑CCTGTGCTGAATTGATCAGAGCTTCCCTAACAGTCAATCACGGCTGCTGATTCTGGCTCAAGAACTTGTCCACCGTGGCTTTGCCATCAGCTGGATCCCCCGCCACCt < 1:1344921/150‑1 (MQ=255) ttAGCAATGTTTTCAAGAAAATTCAGCACAGGTCAGGCGG‑CCTGTGCTGAATTGATCAGAGCTTCCCTAACAGTCAATCACGGCTGCTGATTCTGGCTCAAGAACTTGTCCACCGTGGCTTTGCCATCAGCTGGATCCCCCGCCACCTGc < 2:1578769/150‑1 (MQ=255) ttAGCAATGTTTTCAAGAAAATTCAGCACAGGTCAGGCGG‑CCTGTGCTGAATTGATCAGAGCTTCCCTAACAGTCAATCACGGCTGCTGATTCTGGCTCAAGAACTTGTCCACCGTGGCTTTGCCATCAGCTGGATCCCCCGCCACCTGc < 1:1087414/150‑1 (MQ=255) tgttagggaagctctgatcAATTCAGCACAGGCC‑GCCTGACCTGTGCTGAATTGATCAGAGCTTCCCTAACAGTCAATCACGGCTGCTGATTCTGGCTCAAGAACTTGTCCACCGTGGCTTTGCCATCAGCTGGATCCCCCGCCACCTGc < 1:2083341‑M1/131‑1 (MQ=255) aGCAATGTTTTCAAGAAAATTCAGCACAGGTCAGGCGG‑CCTGTGCTGAATTGATCAGAGCTTCCCTAACAGTCAATCACGGCTGCTGATTCTGGCTCAAGAACTTGTCCACCGTGGCTTTGCCATCAGCTGGATCCCCCGCCACCTGCca < 1:1678212/150‑1 (MQ=255) tgatcAATTCAGCACAGGCC‑GCCTGACCTGTGCTGAATTGATCAGAGCTTCCCTAACAGTCAATCACGGCTGCTGATTCTGGCTCAAGAACTTGTCCACCGTGGCTTTGCCATCAGCTGGATCCCCCGCCACCTGCCACAACCGCCGCTc > 2:2083341‑M1/6‑150 (MQ=255) atcAATTCAGCACAGGCC‑GCCTGACCTGTGCTGAATTGATCAGAGCTTCCCTAACAGTCAATCACGGCTGCTGATTCTGGCTCAAGAACTTGTCCACCGTGGCTTTGCCATCAGCTg > 2:1219129‑M1/4‑117 (MQ=255) atcAATTCAGCACAGGCC‑GCCTGACCTGTGCTGAATTGATCAGAGCTTCCCTAACAGTCAATCACGGCTGCTGATTCTGGCTCAAGAACTTGTCCACCGTGGCTTTGCCATCAGCTg < 1:1219129‑M1/114‑1 (MQ=255) AGGTCAGGCGG‑CCTGTGCTGAATTGATCAGAGCTTCCCTAACAGTCAATCACGGCTGCTGATTCTGGCTCAAGAACTTGTCCACCGTGGCTTTGCCATCAGCTGGATCCCCCGCCACCTGCCACAACCGCCGCTCGATCCCCTGCGCCAg < 1:1283211‑M1/150‑1 (MQ=255) aGGCGG‑CCTGTGCTGAATTGATCAGAGCTTCCCTAACAGTCAATCACGGCTGCTGATTCTGGCTCAAGAACTTGTCCACCGTGGCTTTGCCATCAGCTGGATCCCCCGCCACCTGCCACAAccg < 2:371094/124‑1 (MQ=255) aGGCGG‑CCTGTGCTGAATTGATCAGAGCTTCCCTAACAGTCAATCACGGCTGCTGATTCTGGCTCAAGAACTTGTCCACCGTGGCTTTGCCATCAGCTGGATCCCCCGCCACCTGCCACAAccg > 1:371094/1‑124 (MQ=255) | AACTCAATGAAAGCCGATCGCCTAGCCGGTAGCTTATACTATTGCCTGCATCGAATAAGCTAAAGTCTCGAAATGCTTTAGGAAAACTCCAATCAAGTTGCCCGAAACCTGAAATTAGCAATGTTTTCAAGAAAATTCAGCACAGGTCAGGCGG‑CCTGTGCTGAATTGATCAGAGCTTCCCTAACAGTCAATCACGGCTGCTGATTCTGGCTCAAGAACTTGTCCACCGTGGCTTTGCCATCAGCTGGATCCCCCGCCACCTGCCACAACCGCCGCTCGATCCCCTGCGCCAG > NC_002947/3938831‑3939123 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |