| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,541,825 | Δ1 bp | 5.6% | coding (498/1503 nt) | nhaB → | Na(+)/H(+) antiporter NhaB |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,541,825 | 0 | C | . | 5.6% | 387.0 / 17.5 | 124 | coding (498/1503 nt) | nhaB | Na(+)/H(+) antiporter NhaB |
| Reads supporting (aligned to +/- strand): ref base C (64/50); new base . (4/3); total (69/55) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.31e-01 | |||||||||||
Only 100 of 131 total aligned reads displayed.
TGTTCTCACGCATTTTGCTCGGGGTGCGTTCCAAGGCCATTCTGGCGCTGCTGTTTTGCGTACTGTCGGCGTTTCTATCCGCGTTTCTCGATGCCCTGACCGTCACGGCGGTGATCATCAGCGCTGCGGTCGGCTTCTACGCGGT‑GTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAGCGACCAGCAAGTCGCTCACCTGCACCGGGAAGACCTCGACCAGTTCCGCGCCTTCCTGCGTAGCCTGCTGATGCATGGCGCTGTGGGTACCGCCCTGGG > NC_002947/4541677‑4541974 | tgttcTCACGCATTTTGCTCGGGGTGCGTTCCAAGGCCATTCTGGCGCTGCTGTTTTGCGTACTGTCGGCGTTTCTATCCGCGTTTCTCGATGCCCTGACCGTCACGGCGGTGATCATCAGCGCTGCGGTCGGCTTCTACGCGGT‑GTacc > 2:1031869/1‑150 (MQ=255) gttcTCACGCATTTTGCTCGGGGTGCGTTCCAAGGCCATTCTGGCGCTGCTGTTTTGCGTACTGTCGGCGTTTCTATCCGCGTTTCTCGATGCCCTGACCGTCACGGCGGTGATCATCAGCGCTGCGGTCGGCTTCTACGCGGT‑GTacca < 1:1031869/150‑1 (MQ=255) ttcTCACGCATTTTGCTCGGGGTGCGTTCCAAGGCCATTCTGGCGCTGCTGTTTTGCGTACTGTCGGCGTTTCTATCCGCGTTTCTCGATGCCCTGACCGTCACGGCGGTGATCATCAGCGCTGCGGTCGGCTTCTACGCGGT‑GTaccac > 2:1064148/1‑150 (MQ=255) tcACGCATTTTGCTCGGGGTGCGTTCCAAGGCCATTCTGGCGCTGCTGTTTTGCGTACTGTCGGCGTTTCTATCCGCGTTTCTCGATGCCCTGACCGTCACGGCGGTGATCATCAGCGCTGCGGTCGGCTTCTACGCGGT‑GTACCACcgc > 2:989066/1‑150 (MQ=255) tcACGCATTTTGCTCGGGGTGCGTTCCAAGGCCATTCTGGCGCTGCTGTTTTGCGTACTGTCGGCGTTTCTATCCGCGTTTCTCGATGCCCTGACCGTCACGGCGGTGATCATCAGCGCTGCGGTCGGCTTCTACGCGGT‑GTACCACcgc < 2:2174058/150‑1 (MQ=255) aCGCATTTTGCTCGGGGTGCGTTCCAAGGCCATTCTGGCGCTGCTGTTTTGCGTACTGTCGGCGTTTCTATCCGCGTTTCTCGATGCCCTGACCGTCACGGCGGTGATCATCAGCGCTGCGGTCGGCTTCTACGCGGT‑GTACCACcgcgt > 2:1843261/1‑150 (MQ=255) cGCATTTTGCTCGGGGTGCGTTCCAAGGCCATTCTGGCGCTGCTGTTTTGCGTACTGTCGGCGTTTCTATCCGCGTTTCTCGATGCCCTGACCGTCACGGCGGTGATCATCAGCGCTGCGGTCGGCTTCTACGCGGT‑GTACCACcgcgtc < 1:189861/150‑1 (MQ=255) cATTTTGCTCGGGGTGCGTTCCAAGGCCATTCTGGCGCTGCTGTTTTGCGTACTGTCGGCGTTTCTATCCGCGTTTCTCGATGCCCTGACCGTCACGGCGGTGATCATCAGCGCTGCGGTCGGCTTCTACGCGGT‑GTACCACcgcgtcgc < 1:2093449/150‑1 (MQ=255) ttttGCTCGGGGTGCGTTCCAAGGCCATTCTGGCGCTGCTGTTTTGCGTACTGTCGGCGTTTCTATCCGCGTTTCTCGATGCCCTGACCGTCACGGCGGTGATCATCAGCGCTGCGGTCGGCTTCTACGCGGTGGTA‑CACcgcgtagaag < 1:355167/150‑6 (MQ=255) tGCTCGGGGTGCGTTCCAAGGCCATTCTGGCGCTGCTGTTTTGCGTACTGTCGGCGTTTCTATCCGCGTTTCTCGATGCCCTGACCGTCACGGCGGTGATCATCAGCGCTGCGGTCGGCTTCTACGCGGT‑GTACCACCGCGTCGCGTCCg < 1:458404/150‑1 (MQ=255) tCGGGGTGCGTTCCAAGGCCATTCTGGCGCTGCTGTTTTGCGTACTGTCGGCGTTTCTATCCGCGTTTCTCGATGCCCTGACCGTCACGGCGGTGATCATCAGCGCTGCGGTCGGCTTCTACGCGGT‑GTACCACCGCGTCGCGTCCgggg < 2:2202478/150‑1 (MQ=255) cAAGGCCATTCTGGCGCTGCTGTTTTGCGTACTGTCGGCGTTTCTATCCGCGTTTCTCGATGCCCTGACCGTCACGGCGGTGATCATCAGCGCTGCGGTCGGCTTCTACGCGGT‑GTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGa < 1:1843261/150‑1 (MQ=255) aaGGCCATTCTGGCGCTGCTGTTTTGCGTACTGTCGGCGTTTCTATCCGCGTTTCTCGATGCCCTGACCGTCACGGCGGTGATCATCAGCGCTGCGGTCGGCTTCTACGCGGT‑GTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAg < 1:910520/150‑1 (MQ=255) ggCCATTCTGGCGCTGCTGTTTTGCGTACTGTCGGCGTTTCTATCCGCGTTTCTCGATGCCCTGACCGTCACGGCGGTGATCATCAGCGCTGCGGTCGGCTTCTACGCGGT‑GTACCACCGCGTCGCGTCCGGGGCCAATCcgcgc < 1:130181/145‑1 (MQ=255) ggCCATTCTGGCGCTGCTGTTTTGCGTACTGTCGGCGTTTCTATCCGCGTTTCTCGATGCCCTGACCGTCACGGCGGTGATCATCAGCGCTGCGGTCGGCTTCTACGCGGT‑GTACCACCGCGTCGCGTCCGGGGCCAATCcgcgc > 2:130181/1‑145 (MQ=255) ggCCATTCTGGCGCTGCTGTTTTGCGTAATGTCGCAGTTTGCATACGCGCCTGGGCGGGCCCTGTCCGTCAGGGGGGTGATCATCAGCGCTGCGGTCGGCTTCTACGCGGT‑GTACCACCGCGTCGCGTGCGGGGCCAATCCGCGCGAGGa > 1:45696/1‑150 (MQ=255) gCCATTCTGGCGCTGCTGTTTTGCGTACTGCCGGCGTTTCTAGCCGCGTTGCTCGATGCCCTGACCGTCACGGCGGTGATCATCAGCGCTGCGGTCGGCTTCTACGCGGT‑GTACCACCGCGTCGCGTTCGGGGACAATAcgcgagccgac > 2:10494/1‑143 (MQ=255) cATTCTGGCGCTGCTGTTTTGCGTACTGTCGGCGTTTCTATCCGCGTTTCTCGATGCCCTGACCGTCACGGCGGTGATCATCAGCGCTGCGGTCGGCTTCTACGCGGT‑GTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAg > 2:766384/1‑150 (MQ=255) cTGGCGCTGCTGTTTTGCGTACTGTCGGCGTTTCTATCCGCGTTTCTCGATGCCCTGACCGTCACGGCGGTGATCATCAGCGCTGCGGTCGGCTTCTACGCGGT‑GTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCa > 1:999476/1‑150 (MQ=255) tGGCGCTGCTGTTTTGCGTACTGTCGGCGTTTCTATCCGCGTTTCTCGATGCCCTGACCGTCACGGCGGTGATCATCAGCGCTGCGGTCGGCTTCGACGCGGT‑GGTACACcgcgta > 2:323190/1‑115 (MQ=255) tGGCGCTGCTGTTTTGCGTACTGTCGGCGTTTCTATCCGCGTTTCTCGATGCCCTGACCGTCACGGCGGTGAGCATCAGCGCTGCGGTCGGCTTCGACGCGGT‑GGTACACcgcgta < 1:323190/116‑2 (MQ=255) gcgcTGCTGTTTTGCGTACTGTCGGCGTTTCTATCCGCGTTTCTCGATGCCCTGACCGTCACGGCGGTGATCATCAGCGCTGCGGTCGGCTTCTACGCGGT‑GTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCTAGGACAGCGCACTg > 2:1252466/1‑150 (MQ=255) gcgcTGCTGTTTTGCGTACTGTCGGCGTTTCTATCCGCGTTTCTCGATGCCCTGACCGTCACGGCGGTGATCATCAGCGCTGCGGTCGGCTTCTACGCGGT‑GTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTg < 1:504020/150‑1 (MQ=255) gcgcTGCTGTTTTGCGTACTGTCGGCGTTTCTATCCGCGTTTCTCGATGCCCTGACCGTCACGGCGGTGATCATCAGCGCTGCGGTCGGCTTCTACGCGGT‑GTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTg < 2:1521525/150‑1 (MQ=255) cgcTGCTGTTTTGCGTACTGTCGGCGTTTCTATCCGCGTTTCTCGATGCCCTGACCGTCACGGCGGTGATCATCAGCGCTGCGGTCGGCTTCTACGCGGT‑GTACCACCGCGTCGCGTCCGAGGCCAATCCGCGCGAGGACAGCGCACTgg < 1:1516175/150‑1 (MQ=255) gctgctGTTTTGCGTACTGTCGGCGTTTCTATCCGCGTTTCTCGATGCCCTGACCGTCACGGCGGTGATCATCAGCGCTGCGGTCGGCTTCTACGCGGT‑GTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCCCTggg > 2:685438/1‑149 (MQ=255) gctgctGTTTTGCGTACTGTCGGCGTTTCTATCCGCGTTTCTCGATGCCCTGACCGTCACGGCGGTGATCATCAGCGCTGCGGTCGGCTTCTACGCGGT‑GTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGga > 2:60104/1‑150 (MQ=255) gctgctGTTTTACGTAGTGTCTGCGTTTCTATCCGCGTTTCTCGATGCCCTGACCGTCACGGCGGTGATCATCAGCGCTGCGGTCGGCTTCTACGCGGT‑GTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGga > 2:1297033/1‑150 (MQ=255) tgTTTTGCGTACTGTCGGCGTTTCTATCCGCGTTTCTCGATGCCCTGACCGTCACGGCGGTGATCATCAGCGCTGCGGTCGGCTTCTACGCGGT‑GTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAGCg < 2:1610777/150‑1 (MQ=255) tgTTTTGCGTACTGTCGGCGTTTCTATCCGCGTTTCTCGATGCCCTGACCGTCACGGCGGTGATCATCAGCGCTGCGGTCGGCTTCTACGCGGT‑GTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAGCg > 1:847361/1‑150 (MQ=255) gTTTTGCGTACTGTCGGCGTTTCTATCCGCGTTTCTCGATGCCCTGACCGTCACGGCGGTGATCATCAGCGCTGCGGTCGGCTTCTACGCGGT‑GTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAGCGa < 1:629256/150‑1 (MQ=255) ttttGCGTACTGTCGGCGTTTCTATCCGCGTTTCTCGATGCCCTGACCGTCACGGCGGTGATCATCAGCGCTGCGGTCGGCTTCTACGCGGT‑GTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAGCGAc < 1:732938/150‑1 (MQ=255) ttttGCGTACTGTCGGCGTTTCTATCCGCGTTTCTCGATGCCCTGACCGTCACGGCGGTGATCATCAGCGCTGCGGTCGGCTTCTACGCGGT‑GTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAGCGAc < 1:1064148/150‑1 (MQ=255) tttcGCGTACTGTCGGCGTTTCTATCCGCGTTTCTCGATGCCCTGACCTTCACGGCGGTGATCATCAGCGCTGCGGTCGGCTTCTACGCGGT‑GTACCACCGCGTCTCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGgagattgac < 2:224469/150‑6 (MQ=255) tGCGTACTGTCGGCGTTTCTATCCGCGTTTCTCGATGCCCTGACCGTCACGGCGGTGATCATCAGCGCTGCGGTCGGCTTCTACGCGGT‑GTACCACCGCGTCGCGTCCGGGGCAAATCCGCGCGAGGACAGCGCACTGga > 1:698996/1‑140 (MQ=255) tGCGTACTGTCGGCGTTTCTATCCGCGTTTCTCGATGCCCTGACCGTCACGGCGGTGATCATCAGCGCTGCGGTCGGCTTCTACGCGGT‑GTACCACCGCGTCGCGTCCGGGGCAAATCCGCGCGAGGACAGCGCACTGga < 2:698996/140‑1 (MQ=255) aCTGTCGGCGTTTCTATCCGCGTTTCTCGATGCCCTGACCGTCACGGCGGTGATCATCAGCGCTGCGGTCGGCTTCTACGCGGT‑GTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAGCGACCAGCAAGt < 1:732304/150‑1 (MQ=255) tGTCGGCGTTTCTATCCGCGTTTCTCGATGCCCTGACCGTCACGGCGGTGATCATCAGCGCTGCGGTCGGCTTCTACGCGGT‑GTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAGCGACCAGCAAGTCg > 1:268345/1‑150 (MQ=255) tGTCGGCGTTTCTATCCGCGTTTCTCGATGCCCTGACCGTCACGGCGGTGATCATCAGCGCTGCGGTCGGCTTCTACGCGGT‑GTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAGCGACCAGCAAGTCg > 2:1225402/1‑150 (MQ=255) tCGGCGTTTCTATCCGCGTTTCTCGATGCCCTGACCGTCACGGCGGTGATCATCAGCGCTGCGGTCGGCTTCTACGCGGT‑GTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAGCGACCAGCAAGTCGCt > 1:2137171/1‑150 (MQ=255) ggCGTTTCTATCCGCGTTTCTCGATGCCCTGACCGTCACGGCGGTGATCATCAGCGCTGCGGTCGGCTTCTACGCGGT‑GTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAGCGACCAGCAAGTCGCTCa > 2:2046160/1‑150 (MQ=255) gTTTCTATCCGCGTTTCTCGATGCCCTGACCGTCACGGCGGTGATCATCAGCGCTGCGGTCGGCTTCTACGCGGTGGTA‑CACcgcgta > 2:2405133/1‑87 (MQ=255) tttCTATCCGCGTTTCTCGATGCCCTGACCGTCACGGCGGTGATCATCAGCGCTGCGGTCGGCTTCTACTCGGT‑TTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAGCGACCAGCAAGt < 1:90150/140‑1 (MQ=255) tttCTATCCGCGTTTCTCGATGCCCTGACCGTCACGGCGGTGATCATCAGCGCTGCGGTCGGCTTCTACGCGGT‑GTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAGCGACCAGCAAGt > 2:90150/1‑140 (MQ=255) tttCTATCCGCGTTTCTCGATGCCCTGACCGTCACGGCGGTGATCATCAGCGCTGCGGTCGGCTTCTACGCGGT‑GTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAGCGACCAGCAAGTCGCTCACCTg > 1:1517867/1‑150 (MQ=255) aTCCGCGTTTCTCGATGCCCTGACCGTCACGGCGGTGATCATCAGCGCTGCGGTCGGCTTCTACGCGGT‑GTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAGCGACCAGCAAGTCGCTCACCTGCACCg > 2:399321/1‑150 (MQ=255) tCCGCGTTTCTCGATGCCCTGACCGTCACGGCGGTGATCATCAGCGCTGCGGTCGGCTTCTACGCGGT‑GTACCAGCTCGTCGCGTCCGGAACCGGTAGATCGGAAGAGAACTCGTTTGAGATCGACCAGCAAGTCGCTCACCTGCACCgg > 1:1740080/1‑150 (MQ=255) tCCGCGTTTCTCGATGCCCTGACCGTCACGGCGGTGATCAGCAGCGCTGCGGTCGGCTTCTACGCGGT‑GTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAGCGACCAGCAAGTCGCTCACCTGCACCgg > 1:2295043/1‑150 (MQ=255) cgcgTTTCTCGATGCCCTGACCGTCACGGCGGTGATCATCAGCGCTGCGGTCGGCTTCTACGCGGT‑GTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAGCGACCAGCAAGTCGCTCAc < 1:1018716/139‑1 (MQ=255) cgcgTTTCTCGATGCCCTGACCGTCACGGCGGTGAGCATCAGCGCTGCGGTCGGCTTCTACGCGGT‑GTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAGCGACCAGCAAGTCGCTCACCTGCACCGGGa > 1:665293/1‑150 (MQ=255) gTTTCTCGATGCCCTGACCGTCACGGCGGTGATCATCAGCGCTGCGGTCGGCTTCTACGCGGT‑GTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAGCGACCAGCAAGTCGCTCACCTGCACCGGGAAGa < 2:863827/150‑1 (MQ=255) tcGATGCCCTGACCGTCACGGCGGTGATCATCAGCGCTGCGGTCGGCTTCTACGCGGT‑GTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAg > 1:2234917/1‑100 (MQ=255) tcGATGCCCTGACCGTCACGGCGGTGATCATCAGCGCTGCGGTCGGCTTCTACGCGGT‑GTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAg < 2:2234917/100‑1 (MQ=255) gATGCCCTGACCGTCACGGCGGTGATCATCAGCGCTGCGGTCGGCTTCTACGCGGT‑GTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAGCGACCAGCAAGTCGCTCACCTGCACCGGGAAGACCTCGAc < 1:2008578/150‑1 (MQ=255) gATGCCCTGAACGTCACAGCGGTGATCATCAGCGCTGCGGTCGGCTTCTACGCGGT‑GTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAGCGACCAGCAAGTCGCTCACCTGCACCGGGAAGACCTCGAc > 2:92051/1‑150 (MQ=255) accgCCGTGACGGTCAGGGCGGTGATCATCAGCGCTGCGGTCGGCTTCTACGCGGT‑GTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACa < 1:2111004/94‑1 (MQ=255) ccTGACCGTCACGGCGGTGATCATCAGCGCTGCGGTCGGCTTCTACGCGGT‑GTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAGCGACCAGCAAGTCGCTCACCTGCACCGGGAAGACCTCGACCAGtt > 1:1636967/1‑150 (MQ=255) cTGACCGTCACGGCGGTGATCATCAGCGCTGCGGTCGGCTTCTACGCGGT‑GTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAGc < 1:575011/105‑1 (MQ=255) cTGACCGTCACGGCGGTGATCATCAGCGCTGCGGTCGGCTTCTACGCGGT‑GTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAGc > 2:575011/1‑105 (MQ=255) aCCGTCACGGCGGTGATCATCAGCGCTGCGGTCGGCTTCTACGCGGT‑GTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAGCGACCAGCAAGTCGCTCACCTGCACCGGGAAGACCTCGACCAGTTCcgc < 1:2397922/150‑1 (MQ=255) gTCACGGCGGTGATCATCAGCGCTGCGGTCGGCTTCTACGCGGT‑GTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAGCGACCAGCAAGTCGCTCACCTGCACCGGGAAGACCTCGACCAGTTCCGCGcc > 1:1653652/1‑150 (MQ=255) gTCACGGCGGTGATCATCAGCGCTGCGGTCGGCTTCTACGCGGT‑GTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAGCGACCAGCAAGTCGCTCACCTGCACCGGGAAGACCTCGACCAGTTCCGCGcc > 2:1503157/1‑150 (MQ=255) tCACGGCGGTGATCATCAGCGCTGCGGTCGGCTTCTACGCGGT‑GTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAGCGACCAGCAAGTCGCTCACCTGCACCGGGAAGACCTCGACCAGTTCCGCGCCt > 1:2359649/1‑150 (MQ=255) aCGGCGGTGATCATCAGCGCTGCGGTCGGCTTCTACGCGGT‑GTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAGCGACCAGCAAGTCGCTCACCTGCACCGGGAAGACCTCGACCAGTTCCGCGCCTTc > 2:1424899/1‑150 (MQ=255) aCGGCGGTGATCATCAGCGCTGCGGTCGGCTTCTACGCGGT‑GTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAGCGACCAGCAAGTCGCTCACCTGCACCGGGAAGACCTCGACCAGTTCCGCGCCTTc < 1:2210328/150‑1 (MQ=255) gTGATCATCAGCGCTGCGGTCGGCTTCTACGCGGT‑GTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGga < 2:777901/86‑1 (MQ=255) gTGATCATCAGCGCTGCGGTCGGCTTCTACGCGGT‑GTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGga > 1:777901/1‑86 (MQ=255) gTGATCATCAGCGCTGCGGTCGGCTTCTACGCGGT‑GTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAGCGACCAGCAAGTCGCTCACCTGCACCGGGAAGACCTCGACCAGTTCCGCGCCTTCCTGCGt > 1:1320738/1‑150 (MQ=255) gATCATCAGCGCTGCGGTCGGCTTCTACGCGGT‑GTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAGCGACTTGCTGGTCGCTc < 2:507560/104‑1 (MQ=255) gATCATCAGCGCTGCGGTCGGCTTCTACGCGGT‑GTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAGCGACCAGCAAGTCGCTCACCTGCACCGGGAAGACCTCGACCAGTTCCGCGCCTTCCTGCGTAg > 1:1432354/1‑150 (MQ=255) atcatcAGCGCTGCGGTCGGCTTCTACGCGGT‑GTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAGCGACCAGCAAGTCGCTCACCTGCACCGGGAAGACCTCGACCAGTTCCGCGCCTTCCTGCGTAGc > 2:58254/1‑150 (MQ=255) tcaGCGCTGCGGTCGGCTTCTACGCGGT‑GTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGa < 1:600270/64‑1 (MQ=255) tcaGCGCTGCGGTCGGCTTCTACGCGGT‑GTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAgc > 2:2314977/1‑71 (MQ=255) caGCGCTGCGGTCGGCTTCTACGCGGT‑GTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAGCGACCAGCAAGTCGCTCACCTGCACCGGGAAGACCTCGACCAGTTCCGCGCCTTCCTGCGTAGCctgct < 1:1583071/150‑1 (MQ=255) aGCGCTGCGGTCGGCTTCTACGCGGT‑GTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAGCGACCAGCAAg > 2:2183980/1‑91 (MQ=255) cGGTCGGCTTCGACGCCGT‑GTAGCATCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAGCGACCAGCAAGCCGCTCACCTGCACCGGGAAGACCTCGACCAGTTCCGCGCCTTCCTGCGTAGCCTGCTGATGCATg < 2:45696/150‑1 (MQ=255) ggTCGGCTTCTATGCGGT‑GTACCACCGCGTCGCGTCCGGCCCCAATCTGAGCGAGGACAGCTCAATGGAGATCGACCAGCAAGTCCTTCACCTGCTCCGGGAAGTCCTCTTCATGTTTCGCGTCTTCCTGAGTTGCCTACGGAtcattgg < 2:287615/150‑7 (MQ=255) gTCGGCTTCTACGCGGT‑GTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAGCGACCAGCAAGTCGCTCACCTGCACCGGGAAGACCTCGACCAGTTCCGCGCCTTCCTGCGTAGCCTGCTGATGCATGgc < 2:1002715/150‑1 (MQ=255) tCGGCTTCTACGCGGT‑GTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAGCGACCAGCAAGTCGCTCACCTGCACCGGGAAGAcc > 1:1219368/1‑105 (MQ=255) tCGGCTTCTACGCGGT‑GTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAGCGACCAGCAAGTCGCTCACCTGCACCGGGAAGAcc < 2:1219368/105‑1 (MQ=255) tCGGCTTCTACGCGGT‑GTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAGCGACCAGCAAGTCGCTCACCTGCACCGGGAAGACCTCGACCAGTTCCGCGCCTTCCTGCGTAGCCTGCTGATGCATGgcg > 2:948451/1‑150 (MQ=255) gCTTCTACGCGGT‑GTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAGCGACCAGCAAGTCGCTCACCTGCACCGGGAAGACCTCGACCAGTTCCGCGCCTTCCTGCGTAGCct > 1:907643/1‑133 (MQ=255) gCTTCTACGCGGT‑GTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAGCGACCAGCAAGTCGCTCACCTGCACCGGGAAGACCTCGACCAGTTCCGCGCCTTCCTGCGTAGCct < 2:907643/133‑1 (MQ=255) cTTCTACGCGGT‑GTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAGCGACCAGCAAGTCGCTCACCTGCACCGGGAAGACCTCGACCAGTTCCGCGCCTTCCTGCGTAGCCTGCTGATGCATGGCGCtgt < 2:268345/150‑1 (MQ=255) cTTCTACGCGGT‑GTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAGCGACCAGCAAGTCGCTCACCTGCACCGGGAAGACCTCGACCAGTTCCGCGCCTTCCTGCGTAGCCTGCTGATGCATGGCGCtgt > 2:1081664/1‑150 (MQ=255) cTTCTACGCGGT‑GTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAGCGACCAGCAAGTCGCTCACCTGCACCGGGAAGACCTCGACCAGTTCCGCGCCTTCCTGCGTAGCCTGCTGATGCATGGCGCtgt < 1:399321/150‑1 (MQ=255) cTTCTACGCGGT‑GTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAGCGACCAGCAAGTCGCTCACCTGCACCGGGAAGACCTCGACCAGTTCCGCGCCTTCCTGCGTAGCCTGCTGATGCATGGCGCtgt < 2:2137171/150‑1 (MQ=255) cgaCGCGGTGGTA‑CACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAGCGACCAGCAAGTCGCTCACCTGCACCGGGAAGACCTCGACCAGTTCCGCGCCTTCCTGCGTAGCCTGCTGATGCATGGCGCTGTggg > 1:1226361/3‑150 (MQ=255) tACGCGGT‑GTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAGCGACCAGCAAGTCGCTCACCTGCACCGGGAAGACCTCGa < 2:1013892/101‑1 (MQ=255) tACGCGGT‑GTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAGCGACCAGCAAGTCGCTCACCTGCACCGGGAAGACCTCGa > 1:1013892/1‑101 (MQ=255) tACGCGGT‑GTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAGCGACCAGCAAGTCGCTCACCTGCACCGGGAAGACCTCGACCAGTTCCGCGCCTTCCTGCGTAGCCTGCTGATGCATGGCGCTGTGGGt > 2:1450495/1‑150 (MQ=255) gaCGCGGTGGTA‑CACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAGCGACCAGCAAGTCGCTCACCTGCACCGGGAAGACCTCGACCAGTTCCgcgc < 1:1348704/112‑1 (MQ=255) gaCGCGGTGGTA‑CACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAGCGACCAGCAAGTCGCTCACCTGCACCGGGAAGACCTCGACCAGTTCCgcgc > 2:1348704/2‑113 (MQ=255) gaCGCGGTGGTA‑CACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAGCGACCAGCAAGTCGCTCACCTGCACCGGGAAGACCTCGACCAGTTCCGCGCCTTCCTGCGTAGCCTGCTGATg < 2:546264/134‑1 (MQ=255) aCGCGGT‑GTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAGCGACCAGCAAGTCGCTCACCTGCACCGGGAAGACCTCGACCAGTTCCGCGCCTTCCTGCGTAGCCTGCTGATGCATGGCGCTGTGGGTa < 1:58254/150‑1 (MQ=255) aCGCGGT‑GTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAGCGACCAGCAAGTCGCTCACCTGCACCGGGAAGACCTCGACCAGTTCCGCGCCTTCCTGCGTAGCCTGCTGATGCATGGCGCTGTGGGTa > 2:741140/1‑150 (MQ=255) t‑gtACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAGCGACCAGCAAGTCGCTCACCTGCACCGGGACGACCTCGACCAGTTCCGCTCCTTCCTGCGTAGCCTGCTGATGCATGGCGCTGTGGGTACCGccc < 1:1225402/150‑1 (MQ=255) accaccGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAGCGACCAGCAAGTCGCTCACCTGCACCGGGAAGACCTCGACCAGTTCCGCGCCTTCCTGCGTAGCCTGCTGATGCATGGCGCTGTGGGTACCGCCCTgg < 2:1432354/150‑1 (MQ=255) accaccGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAGCGACCAGCAAGTCGCTCACCTGCACCGGGAAGACCTCGACCAGTTCCGCGCCTTCCTGCGTAGCCTGCTGATGCATGGCGCTGTGGGTACCGCCCTgg < 2:1694968/150‑1 (MQ=255) ccaccGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAGCGACCAGCAAGTCGCTCACCTGCACCGGGAAGACCTCGACCAGTTCCGCGCCTTCCTGCGTAGCCTGCTGATGCATGGCGCTGTGGGTACCGCCCTggg > 1:245207/1‑150 (MQ=255) | TGTTCTCACGCATTTTGCTCGGGGTGCGTTCCAAGGCCATTCTGGCGCTGCTGTTTTGCGTACTGTCGGCGTTTCTATCCGCGTTTCTCGATGCCCTGACCGTCACGGCGGTGATCATCAGCGCTGCGGTCGGCTTCTACGCGGT‑GTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAGCGACCAGCAAGTCGCTCACCTGCACCGGGAAGACCTCGACCAGTTCCGCGCCTTCCTGCGTAGCCTGCTGATGCATGGCGCTGTGGGTACCGCCCTGGG > NC_002947/4541677‑4541974 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |