| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,750,059 | Δ1 bp | 6.5% | intergenic (+35/+37) | PP_4203 → / ← mqsA | ubiquinone oxidoreductase electron transfer flavoprotein/type II toxin‑antitoxin MqsRA system antitoxin/DNA‑binding transcriptional repressor |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,750,059 | 0 | T | . | 6.5% | 332.4 / 17.0 | 107 | intergenic (+35/+37) | PP_4203/mqsA | ubiquinone oxidoreductase electron transfer flavoprotein/type II toxin‑antitoxin MqsRA system antitoxin/DNA‑binding transcriptional repressor |
| Reads supporting (aligned to +/- strand): ref base T (49/50); new base . (3/4); total (53/54) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.34e-01 | |||||||||||
Only 100 of 109 total aligned reads displayed.
CGCAGAACTGCGTGCACTGCAAGACCTGCGACATCAAGGACCCGGCCCAGAACATCACCTGGGTCACCCCTGAAGGCGCTGGCGGGCCGAACTATCCGAACATGTAAGGCCCCTGCCCTTGCGGCAACAAAAAGCCCCCGGTTCTCATGAG‑‑CCGGGGGC‑TTTTTGTTGGCTGCCATTATCAGGCAGTACGCACTTCCTCAAAGAGTTCTGGATGGCGATCCAGCAGCTTGAGCAGTTTCACCAACGCCACTGGCGGGGTGGTCTTGCCGTTTTCATAACGGGAGAACGCAT > NC_002947/4749918‑4750208 | cgcAGAACTGCGTGCACTGCAAGACCTGCGACATCAAGGACCCGGCCCAGAACATCACCTGGGTCACCCCTGAAGGCGCTGGCGGGCCGAACTATCCGAACATGTAAGGCCCCTGCCCTTGCGGCAACAAAAAGCCCCCGGTTCTCATGa < 2:1564520/150‑1 (MQ=255) gcAGAACTGCGTGCACTGCAAGACCTGCGACATCAAGGACCCGGCCCAGAACATCACCTGGGTCACCCCTGAAGGCGCTGGCGGGCCGAACTATCCGAACATGTAAGGCCCCTGCCCTTGCGGCAACAAAAAGCCCCCGGTTCTCATGAg < 1:681119/150‑1 (MQ=255) gAACTGCGTGCACTGCAAGACCTGCGACATCAAGGACCCGGCCCAGAACATCACCTGGGTCACCCCTGAAGGCGCTGGCGGGCCGAACTATCCGAACATGTAAGGCCCCTGCCCTTGCGGCAACAAAAAGCCCCCGGTTCTCATGAG‑‑CCg > 2:786342/1‑150 (MQ=255) aaCTGCGTGCACTGCAAGACCTGCGACATCAAGGACCCGGCCCAGAACATCACCTGGGTCACCCCTGAAGGCGCTGGCGGGCCGAACTATCCGAACATGTAAGGCCCCTGCCCTTGCGGCAACAAAAAGCCCCCGGTTCTCATGAG‑‑CCgg < 2:1814163/150‑1 (MQ=255) aaCTGCGTGCACTGCAAGACCTGCGACATCAAGGACCCGGCCCAGAACATCACCTGGGTCACCCCTGAAGGCGCTGGCGGGCCGAACTATCCGAACATGTAAGGCCCCTGCCCTTGCGGCAACAAAAAGCCCCCGGTTCTCATGAG‑‑CCgg < 2:741274/150‑1 (MQ=255) aaCTGCGTGCACTGCAAGACCTGCGACATCAAGGACCCGGCCCAGAACATCACCTGGGTCACCCCTGAAGGCGCTGGCGGGCCGAACTATCCGAACATGTAAGGCCCCTGCCCTTGCGGCAACAAAAAGCCCCCGGTTCTCATGAG‑‑CCgg < 2:2349603/150‑1 (MQ=255) aCTGCGTGCACTGCAAGACCTGCGACATCAAGGACCCGGCCCAGAACATCACCTGGGTCACCCCTGAAGGCGCTGGCGGGCCGAACCAGCCGAACATGTAAGGCCCCTGCCCTTGCGGCAACAAAAAGCCCCCGG‑‑CTCATGAgaaccggg < 2:1326906/150‑8 (MQ=255) cTGCGTGCACTGCAAGACCTGCGACATCAAGGACCCGGCCCAGAACATCACCTGGGTCACCCCTGAAGGCGCTGGCGGGCCGAACTATCCGAACATGTAAGGCCCCTGCCCTTGCGGCAACAAAAAGCCCCCGGTTCTCATGAG‑‑CCgggg < 1:1254380/150‑1 (MQ=255) tGCGTGCACTGCAAGACCTGCGACATCAAGGACCCGGCCCAGAACATCACCTGGGTCACCCCTGAAGGCGCTGGCGGGCCGAACTATCCGAACATGTAAGGCCCCTGCCCTTGCGGCAACAAAAAGCCCCCGGTTCTCAt < 1:2154439/140‑1 (MQ=255) tGCGTGCACTGCAAGACCTGCGACATCAAGGACCCGGCCCAGAACATCACCTGGGTCACCCCTGAAGGCGCTGGCGGGCCGAACTATCCGAACATGTAAGGCCCCTGCCCTTGCGGCAACAAAAAGCCCCCGGTTCTCAt > 2:2154439/1‑140 (MQ=255) tGCGTGCACTGCAAGACCTGCGACATCAAGGACCCGGCCCAGAACATCACCTGGGTCACCCCTGAAGGCGCTGGCGGGCCGAACTATCCGAACATGTAAGGCCCCTGCCCTTGCGGCAACAAAAAGCCCCCGGTTCTCATGAG‑‑CCggggg < 2:170800/150‑1 (MQ=255) tGCAAGACCTGCGACATCAAGGACCCGGCCCAGAACATCACCTGGGTCACCCCTGAAGGCGCTGGCGGGCCGAACTATCCGAACATGTAAGGCCCCTGCCCTTGCGGCAACAAAAAGCCCCCGGTTCTCATGAG‑‑CCGGGGGC‑TTTttgtt > 1:1109485/1‑150 (MQ=255) ggCAAGACCTGCGACAGCAAGGACCCGGCCCAGAACATCACCTGGGTCACCCCTGAAGGCGCTGGCGGGCCGAACTATCCGAACATGTAAGGCCCCTGCCCTTGCGGCAACAAAAAGCCCCCGGTTCTCATGAG‑‑CCGGGGGC‑TCTctgtt > 2:833661/2‑150 (MQ=255) aaGACCTGCGACATCAAGGACCCGGCCCAGAACATCACCTGGGTCACCCCTGAAGGCGCTGGCGGGCCGAACTATCCGAACATGTAAGGCCCCTGCCCTTGCGCCAACAAAAAGCCCCCGG‑‑CTCATGAGAACCGGGGGC‑TTTttgttgcc < 2:1177560/150‑3 (MQ=37) gACCTGCGACATCAAGGACCCGGCCCAGAACATCACCTGGGTCACCCCTGAAGGCGCTGGCGGGCCGAACTATCCGAACATGTAAGGCCCCTGCCCTTGCGGCAACAAAAAGCCCCCGGTTCTCATGAG‑‑CCggggg < 2:1136309/136‑1 (MQ=255) gACCTGCGACATCAAGGACCCGGCCCAGAACATCACCTGGGTCACCCCTGAAGGCGCTGGCGGGCCGAACTATCCGAACATGTAAGGCCCCTGCCCTTGCGGCAACAAAAAGCCCCCGGTTCTCATGAG‑‑CCggggg > 1:1136309/1‑136 (MQ=255) gACCTGCGACATCAAGGACCCGGCCCAGAACATCACCTGGGTCACCCCTGAAGGCGCTGGCGGGCCGAACTATCCGAACATGTAAGGCCCCTGCCCTTGCGGCAACAAAAAGCCCCCGG‑‑CTCATGAgaaccgg < 2:963808/133‑7 (MQ=255) gACCTGCGACATCAAGGACCCGGCCCAGAACATCACCTGGGTCACCCCTGAAGGCGCTGGCGGGCCGAACTATCCGAACATGTAAGGCCCCTGCCCTTGCGGCAACAAAAAGCCCCCGG‑‑CTCATGAgaaccgg > 1:963808/1‑127 (MQ=255) cTGCGACATCAAGGACCCGGCCCAGAACATCACCTGGGTCACCCCTGAAGGCGCTGGCGGGCCGAACTATCCGAACATGTAAGGCCCCTGCCCGTGCGGCAACAAAAAGCCCCCGGTTCTCATGAG‑‑CCGGGGGC‑TTTTTGTTGGCTGCCa < 1:698836/150‑1 (MQ=255) tGCGACATCAAGGACCCGGCCCAGAACATCACCTGGGTCACCCCTGAAGGCGCTGGCGGGCCGAACTATCCGAACATGTAAGGCCCCTGCCCTTGCGGCAACAAAAAGCCCCCGGTTCTCATGAG‑‑CCGGGGGC‑TTTTTGTTGGCTGCCAt > 2:2014092/1‑150 (MQ=255) tGCGACATCAAGGACCCGGCCCAGAACATCACCTGGGTCACCCCTGAAGGCGCTGGCGGGCCGAACTATCCGAACATGTAAGGCCCCTGCCCTTGCGGCAACAAAAAGCCCCCGGTTCTCATGAG‑‑CCGGGGGC‑TTTTTGTTGGCTGCCAt > 1:1801495/1‑150 (MQ=255) cATCAAGGACCCGGCCCAGAACATCACCTGGGTCACCCCTGAAGGCGCTGGCGGGCCGAACTATCCGAACATGTAAGGCCCCTGCCCTTGCGTGAACAAAAANCCCCCGNTCCTCATGAG‑‑CCGTGGGC‑TTTTTGTTGGCTGCCATTATCa < 1:1260787/150‑1 (MQ=255) aTCAAGGACCCGGCCCAGAACATCACCTGGGTCACCCCTGAAGGCGCTGGCGGGCCGAACTATCCGAACATGTAAGGCCCCTGCCCTTGCGGCAACAAAAAGCCCCCGGTTCTCATGAG‑‑CCGGGGGC‑TTTTTGTTGGCTGCCATTATCAg > 2:377636/1‑150 (MQ=255) aaGGACCCGGCCCAGAACATCACCTGGGTCACCCCTGAAGGCGCTGGCGGGCCGAACTATCCGAACATGTAAGGCCCCTGCCCTTGCGGCAACAAAAAGCCCCCGGTTCTCATGAG‑‑CCGGGGGC‑TTTttgtt > 1:2262692/1‑132 (MQ=255) aaGGACCCGGCCCAGAACATCACCTGGGTCACCCCTGAAGGCGCTGGCGGGCCGAACTATCCGAACATGTAAGGCCCCTGCCCTTGCGGCAACAAAAAGCCCCCGGTTCTCATGAG‑‑CCGGGGGC‑TTTTTGTTGGCTGCCATTATCAGGCa > 2:855820/1‑150 (MQ=255) ggACCCGGCCCAGAACATCACCTGGGTCACCCCTGAAGGCGCTGGCGGGCCGAACTATCCGAACATGTAAGGCCCCTGCCCTTGCGGCAACAAAAAGCCCCCGGTTCTCATGAG‑‑CCGGGGGC‑TTTTTGTTGGCTGCCATTATCAGGCAGt > 1:1563220/1‑150 (MQ=255) ccGGCCCAGAACATCACCTGGGTCACCCCTGAAGGCGCTGGCGGGCCGAACTATCCGAACATGTAAGGCCCCTGCCCTTGCGGCAACAAAAAGCCCCCGGTTCTCATGAG‑‑CCg < 1:812595/113‑1 (MQ=255) ccGGCCCAGAACATCACCTGGGTCACCCCTGAAGGCGCTGGCGGGCCGAACTATCCGAACATGTAAGGCCCCTGCCCTTGCGGCAACAAAAAGCCCCCGGTTCTCATGAG‑‑CCg > 2:812595/1‑113 (MQ=255) ccGGCCCAGAACATCACCTGGGTCACCCCTGAAGGCGCTGGCGGGCCGAACTATCCGAACATGTAAGGCCCCTGCCCTTGCGGCAACAAAAAGCCCCCGGTTCTCATGAG‑‑CCGGGGGC‑TTTTTGTTGGCTGCCATTATCAGGCAGTACGc > 2:1694240/1‑150 (MQ=255) cGGCCCAGAACATCACCTGGGTCACCCCTGAAGGCGCTGGCGGGCCGAACTATCCGAACATGTAAGGCCCCTGCCCTTGCGGCAACAAAAAGCCCCCGGTTCTCATGAG‑‑CCGGGGGC‑TTTTTGTTGGCTGCCATTATc < 1:1660832/138‑1 (MQ=255) cGGCCCAGAACATCACCTGGGTCACCCCTGAAGGCGCTGGCGGGCCGAACTATCCGAACATGTAAGGCCCCTGCCCTTGCGGCAACAAAAAGCCCCCGGTTCTCATGAG‑‑CCGGGGGC‑TTTTTGTTGGCTGCCATTATc > 2:1660832/1‑138 (MQ=255) ccAGAACATCACCTGGGTCACCCCTGAAGGCGCTGGCGGGCCGAACTATCCGAACATGTAAGGCCCCTGCCCTTGCGGCAACAAAAAGCCCCCGGTTCTCATGAG‑‑CCggg > 1:1600049/1‑110 (MQ=255) ccAGAACATCACCTGGGTCACCCCTGAAGGCGCTGGCGGGCCGAACTATCCGAACATGTAAGGCCCCTGCCCTTGCGGCAACAAAAAGCCCCCGGTTCTCATGAG‑‑CCggg < 2:1600049/110‑1 (MQ=255) cAGAACATCACCTGGGTCACCCCTGAAGGCGCTGGCGGGCCGAACTATCCGAACATGTAAGGCCCCTGCCCTTGCGGCAACAAAAAGCCCCCGGTTCTCATGAG‑‑CCggggg < 2:1162996/111‑1 (MQ=255) cAGAACATCACCTGGGTCACCCCTGAAGGCGCTGGCGGGCCGAACTATCCGAACATGTAAGGCCCCTGCCCTTGCGGCAACAAAAAGCCCCCGGTTCTCATGAG‑‑CCggggg > 1:1162996/1‑111 (MQ=255) cATCACCTGGGTCACCCCTGAAGGCGCTGGCGGGCCGAACTATCCGAACATGTAAGGCCCCTGCCCTTGCGGCAACAAAAAGCCCCCGGTTCTCATGAG‑‑CCGGGGGC‑TTTTTGTTGGCTGc > 1:461390/1‑121 (MQ=255) cATCACCTGGGTCACCCCTGAAGGCGCTGGCGGGCCGAACTATCCGAACATGTAAGGCCCCTGCCCTTGCGGCAACAAAAAGCCCCCGGTTCTCATGAG‑‑CCGGGGGC‑TTTTTGTTGGCTGc < 2:461390/121‑1 (MQ=255) cATCACCTGGGTCAACCCTGAAGGCGCTGGCGGGACGAACTATCCAAACATGTAAGGCCCCTGCACTTGCAGCAACAAAAAGCCCCCGGTTCTCATGAG‑‑CCGGGGGC‑TTTTTGTTGGCTGCCATTATCAGGCAGTACGCACTTCCTCaaa < 2:1109485/150‑1 (MQ=255) tCACCTGGGTCACCCCTGAAGGCGCTGGCGGGCCGAACTATCCGAACATGTAAGGCCCCTGCCCTTGCGGCAACAAAAAGCCCCCGGTTCTCATGAG‑‑CCGGGGGC‑TTTTTGTTGGCTGCCATTATCAGGCAGTACGCACTTCCTCAAaga > 2:1805486/1‑150 (MQ=255) aCCTGGGTCACCCCTGAAGGCGCTGGCGGGCCGAACTATCCGAACATGTAAGGCCCCTGCCCTTGCGGCAACAAAAAGCCCCCGGTTCTCATGAG‑‑CCGGGGGC‑TTTTTGTTGGCTGCCATTATCAGGCAGTACGCACTTCCTCAAAGAGt > 1:2211898/1‑150 (MQ=255) aCCTGGGTCACCCCTGAAGGCGCTGGCGGGCCGAACTATCCGAACATGTAAGGCCCCTGCCCTTGCGGCAACAAAAAGCCCCCGGTTCTCATGAG‑‑CCGGGGGC‑TTTTTGTTGGCTGCCATTATCAGGCAGTACGCACTTCCTCAAAGAGt > 1:1842924/1‑150 (MQ=255) tGGGTCACCCCTGAAGGCGCTGGCGGGCCGAACTATCCGAACATGTAAGGCCCCTGCCCTTGCGGCAACAAAAAGCCCACGGTTCTCATGAG‑‑CCGCCATCGTTGGTGTT‑GCTGCCATTATCAGGCAGTACGCACTTCCTCAAAGAGTTCt < 1:2224215/150‑1 (MQ=255) tCACCCCTGAAGGCGCTGGCGGGCCGAACTATCCGAACATGTAAGGCCCCTGCCCTTGCGGCAACAAAAAGCCCCCGGTTCTCATGAG‑‑CCGGGGGC‑TTTTTGTTGGCTGCCATTATCAGGCAGTACGCACTTCCTCaaa > 1:269608/1‑139 (MQ=255) tCACCCCTGAAGGCGCTGGCGGGCCGAACTATCCGAACATGTAAGGCCCCTGCCCTTGCGGCAACAAAAAGCCCCCGGTTCTCATGAG‑‑CCGGGGGC‑TTTTTGTTGGCTGCCATTATCAGGCAGTACGCACTTCCTCaaa < 2:269608/139‑1 (MQ=255) aCCCCTGAAGGCGCTGGCGGGCCGAACTATCCGAACATGTAAGGCCCCTGCCCTTGCGGCAACAAAAAGCCCCCGGTTCTCATGAG‑‑CCGGGGGC‑TTTTTGTTGGCTGCCATTATCAGGCAGTACGCACTTCCTCAAAGAGTTCTGGATgg < 1:1605472/150‑1 (MQ=255) cccTGAAGGCGCTGGCGGGCCGAACTATCCGAACATGTAAGGCCCCTGCCCTTGCGGCAACAAAAAGCCCCCGGTTCTCATGAG‑‑CCGGGGGC‑TTTTTGTTGGCTGCCATTATCAGGCAGTAc > 1:1744144/1‑122 (MQ=255) cccTGAAGGCGCTGGCGGGCCGAACTATCCGAACATGTAAGGCCCCTGCCCTTGCGGCAACAAAAAGCCCCCGGTTCTCATGAG‑‑CCGGGGGC‑TTTTTGTTGGCTGCCATTATCAGGCAGTACGCACTTCCTCAAAGAGTTCTGGATGGCg > 2:1275994/1‑150 (MQ=255) ccTGAAGGCGCTGGCGGGCCGAACTATCCGAACATGTAAGGCCCCTGCCCTTGCGGCAACAAAAAGCCCCCGGTTCTCATGAG‑‑CCGGGGGC‑TTTTTGTTGGCTGCCATTATCAGGCAGTa < 1:710245/120‑1 (MQ=255) ccTGAAGGCGCTGGCGGGCCGAACTATCCGAACATGTAAGGCCCCTGCCCTTGCGGCAACAAAAAGCCCCCGGTTCTCATGAG‑‑CCGGGGGC‑TTTTTGTTGGCTGCCATTATCAGGCAGTa > 2:710245/1‑120 (MQ=255) cTGAAGGCGCTGGCGGGCCGAACTATCCGAACATGTAAGGCCCCTGCCCTTGCGGCAACAAAAAGCCCCCGGTTCTCATGAG‑‑CCGGGGGC‑TTTTTGTTGGCTGCCATTATCAGGCAGTACGCACTTCCTCAAAGAGTTc > 1:399578/1‑139 (MQ=255) cTGAAGGCGCTGGCGGGCCGAACTATCCGAACATGTAAGGCCCCTGCCCTTGCGGCAACAAAAAGCCCCCGGTTCTCATGAG‑‑CCGGGGGC‑TTTTTGTTGGCTGCCATTATCAGGCAGTACGCACTTCCTCAAAGAGTTc < 2:399578/139‑1 (MQ=255) cTGAAGGCGCTGGCGGGCCGAACTATCCGAACATGTAAGGCCCCTGCCCTTGCGGCAACAAAAAGCCCCCGGTTCTCATGAG‑‑CCGGGGGC‑TTTTTGTTGGCTGCCATTATCAGGCAGTACGCACTTCCTCAAAGAGTTCTGGATGGCGAt < 2:1842924/150‑1 (MQ=255) tGAAGGCGCTGGCGGGCCGAACTATCCGAACATGTAAGGCCCCTGCCCTTGCGGCAACAAAAAGCCCCCGGTTCTCATGAG‑‑CCGGGGGC‑TTTTTGTTGGCTGCCATTATCAGGCAGTACGCACTTCCTCAAAGAGTTCTGGATGGCGATc < 1:1275994/150‑1 (MQ=255) gcgcTGGCGGGCCGAACTATCCGAACATGTAAGGCCCCTGCCCTTGCGGCAACAAAAAGCCCCCGGTTCTCATGAG‑‑CCGGGGGC‑TTTTTGTTGGCTGCCATTATCAGGCAGTACGCACTTCCTCAAAGAGTTCTGGATGGCGATCcagca < 1:1009310/150‑1 (MQ=255) gcgcTGGCGGGCCGAACTATCCGAACATGTAAGGCCCCTGCCCTTGCGGCAACAAAAAGCCCCCGGTTCTCATGAG‑‑CCGGGGGC‑TTTTTGTTGGCTGCCATTATCAGGCAGTACGCACTTCCTCAAAGAGTTCTGGATGGCGATCcagca < 1:701103/150‑1 (MQ=255) gcTGGCGGGCCGAACTATCCGAACATGTAAGGCCCCTGCCCTTGCGGCAACAAAAAGCCCCCGGTTCTCATGAG‑‑CCGGGGGC‑TTTTTGTTGGCTGCCATTATCAGGCAGTACGCACTTCCTCAAAGAGTTCTGGATGGCGATCCagcagc > 1:896331/1‑150 (MQ=255) tGGCGGGCCGAACTATCCGAACATGTAAGGCCCCTGCCCTTGCGACAACAAAAAGCCCCCGGTTCTCATGAG‑‑CCGGGGGC‑TTTTTGTTGGCTGCCATTATCAGGCAGTACGCACTTCCTCAAAGAGTTCTGGATGGCGATCCAGCAGCtt < 2:1738656/150‑1 (MQ=255) ggCGGGCCGAACTATCCGAACATGTAAGGCCCCTGCCCTTGCGGCAACAAAAAGCCCCCGGTTCTCATGAG‑‑CCGGGGGC‑TTTTTGTTGGCTGCCATTATCAGGCAGTACGCACTTCCTCAAAGAGTTCTGGATGGCGATCCAGCAGCTTg > 1:468007/1‑150 (MQ=255) gggCCGAACTATCCGAACATGTAAGGCCCCTGCCCTTGCGGCAACAAAAAGCCCCCGGTTCTCATGAG‑‑CCGGGGGC‑TTTTTGTTGGCTGCCATTATCAGGCAGTACGCACTTCCTCAAAGAGTTCTGGATGGCGATCCAGCAGCTTGAGc > 1:1043134/1‑150 (MQ=255) gCCGAACTATCCGAACATGTAAGGCCCCTGCCCTTGCGGCAACAAAAAGCCCCCGGTTCTCATGAG‑‑CCGGGGGC‑TTTTTGTTGGCTGCCATTACCAGGCAGTACGCACTTCCTCAAAGAGTTCTGGATGGCGATCCAGCAGCTTGAGCAg < 2:1563220/150‑1 (MQ=255) ccGAACTATCCGAACATGTAAGGCCCCTGCCCTTGCGGCAACAAAAAGCCCCCGGTTCTCATGAG‑‑CCGGGGGC‑TTTTTGTTGGCTGCCATTATCAGGCAGTACGCACTTCCTCAAAGAGTTCTGGATGGCGATCCAGCAGCTTGAGCAGt < 1:855820/150‑1 (MQ=255) aaCTATCCGAACATGTAAGGCCCCTGCCCTTGCGGCAACAAAAAACCCCCGGTTCTCATGAG‑‑CCGGGGGC‑TTTTTGTTGGCTGCCATTATCAGGCAGTACGCACTTCCTCAAAGAGTTCTGGATGGCGATCCAGCAGCTTGAGCAGTTTc > 2:695615/1‑150 (MQ=255) tCCGAACATGTAAGGCCCCTGCCCTTGCGGCAACAAAAAGCCCCCGGTTCTCATGAG‑‑CCGGGGGC‑TTTttgttg < 1:836399/74‑1 (MQ=255) tCCGAACATGTAAGGCCCCTGCCCTTGCGGCAACAAAAAGCCCCCGGTTCTCATGAG‑‑CCGGGGGC‑TTTttgttg > 2:836399/1‑74 (MQ=255) gAACATGTAAGGCCCCTGCCCTTGCGGCAACAAAAAGCCCCCGGTTCTCATGAG‑‑CCGGGGGC‑TTTTTGTTGGCTGCCATTATCAGGCAGTACGCACTTCCTCAAAGAGTTCTGGATGGCGATCCAGCAGCTTGAGCAGTTTCACCAACGc > 1:1455443/1‑150 (MQ=255) gAACATGTAAGGCCCCTGCCCTTGCGGCAACAAAAAGCCCCCGGTTCTCATGAG‑‑CCGGGGGC‑TTTTTGTTGGCTGCCATTATCAGGCAGTACGCACTTCCTCAAAGAGTTCTGGATGGCGATCCAGCAGCTTGAGCAGATTCACCAACGc > 1:1766275/1‑150 (MQ=255) tGTAAGGCCCCTGCCCTTGCGGCAACAAAAAGCCCCCGGTTCTCATGAG‑‑CCGGGGGC‑TTTTTGTTGGCTGCCATTATCAGGCAGTACGCACTTCCTCAAAGAGTTCTGGATGGCGATCCAGCAGCTTGAGCAGTTTCACCAACGCCACTg > 2:837635/1‑150 (MQ=255) aaGGCCCCTGCCCTTGCGGCAACAAAAAGCCCCCGGTTCTCATGAG‑‑CCGGGGGC‑TTTTTGTTGGCTGCCATTATCAGGCAGTACGCACTTCCTCAAAGAGTTCTGGATGGCGATCCAGCAGCTTGAGCAGTTTCACCAACGCCACTGGCg > 2:382067/1‑150 (MQ=255) aaGGCCCCTGCCCTTGCGGCAACAAAAAGCCCCCGGATCTCATGAG‑‑CCGGGGGC‑TTTTTGTTGGCTGCCATTATCAGGCAGTACGCACTTCCTCAAAGAGTTCTGGATGGCGATCCAGCAGCTTGAGCAGTTTCACCAACGCCACTGGCg > 2:47474/1‑150 (MQ=255) ccccTGCCCTTGCGGCAACAAAAAGCCCCCGGTTCTCATGAG‑‑CCGGGGGC‑TTTTTGTTGGCTGCCATTATCAGGCAGTACGCACTTCCTCAAAGAGTTCTGGATGGCGATCCAGCAGCTTGAGCAGTTTCACCAACGCCACTGGCGGggt < 1:1694240/150‑1 (MQ=255) cccTTGCGGCAACAAAAAGCCCCCGGTTCTCATGAG‑‑CCGGGGGC‑TTTTTGTTGGCTGCCATTATCAGGCAGTACGCACTTCCTCAAAGAGTTCTGGATGGCGATCCAGCAGCTTGAGCAGTTTCACCAACGCCa > 1:1819077/1‑134 (MQ=255) cccTTGCGGCAACAAAAAGCCCCCGGTTCTCATGAG‑‑CCGGGGGC‑TTTTTGTTGGCTGCCATTATCAGGCAGTACGCACTTCCTCAAAGAGTTCTGGATGGCGATCCAGCAGCTTGAGCAGTTTCACCAACGCCa < 2:1819077/134‑1 (MQ=255) ccTTGCGGCAACAAAAAGCCCCCGGTTCTCATGAG‑‑CCGGGGGC‑TTTTTGTTGGCTGCCATTATCAGGCAGTACGCACTTCCTCAAAGAGTTCTGGATGGCGATCCAGCAGCTTGAGCAGTTTCACCAACGCCACTGGCGGGGTGGTCTTg > 1:671263/1‑150 (MQ=255) ttGCGGCAACAAAAAGCCCCCGGTTCTCATGAG‑‑CCGGGGGC‑TTTTTGTTGGCTGCCATTATCAGGCAGTACGCACTTCCTCAAaga > 1:973240/1‑86 (MQ=255) ggCAACAAAAAGCCCCCGGTTCTCATGAG‑‑CCGGGGGC‑TTTTTGTTGGCTGCCATTATCAGGCAGTACGCACTTCCTCAAAGAGTTCTGGATGGCGATCCAGCAGCTTGAGCAGATTCACCAACGCCACTGGCGGGGTGGTCTTGCCGttt < 2:1766275/150‑1 (MQ=255) gccaacaaAAAGCCCCCGG‑‑CTCATGAGAACCGGGGGC‑TTTTTGTTGGCTGCCATTATCAGGCAGTACGCACTTCCTCAAAGAGTTCTGGATGGCGATCCAGCAGCTTGAGCAGTTTCACCAACGCCACTGGCGGGGTGGTCTTGCCGttt > 1:1571872/3‑150 (MQ=38) gCAACAAAAAGCCCCCGGTTCTCATGAG‑‑CCGGGGGC‑TTTTTGTTGGCTGCCATTATCAGGCAGTACGCACTTCCTCAAAGAGTTCTGGATGGCGATCCAGCAGCTTGAGCAGTTTCACCAACGCCACTGGCGGGGTGGTCTTGCCGtttt > 1:40761/1‑150 (MQ=255) gCAACAAAAAGCCCCCGGTTCTCATGAG‑‑CCGGGGGC‑TTTTTGTTGGCTGCCATTATCAGGCAGTACGCACTTCCTCAAAGAGTTCTGGATGGCGATCCAGCAGCTTGAGCAGTTTCACCAACGCCACTGGCGGGGTGGTCTTGCCGtttt > 2:576954/1‑150 (MQ=255) caacaaAAAGCCCCCGGTTCTCATGAG‑‑CCGGGGGC‑TTTTTGTTGGCTGCCATTATCAGGCAGTACGCACTTCCTCAAAGAGTTCTGGATGGCGATCCAGCAGCTTGAGCAGTTTCACCAACGCCACTGGCGGGGTGGTCTTGCCGTTTTc > 2:185854/1‑150 (MQ=255) caacaaAAAGCCCCCGGTTCTCATGAG‑‑CCGGGGGC‑TTTTTGTTGGCTGCCATTATCAGGCAGTACGCACTTCCTCAAAGAGTTCTGGATGGCGATCCAGCAGCTTGAGCAGTTTCACCAACGCCACTGGCGGGGTGGTCTTGCCGTTTTc < 1:576954/150‑1 (MQ=255) caacaaAAAGCCCCCGG‑‑CTCATGAGAACCGGGGGC‑TTTTTGTTGGCTGCCATTATCAGGCAGTACGCACTTCCTCAAAGAGTTCTGGATGGCGATCCAGCAGCTTGa > 2:1951165/1‑107 (MQ=25) caacaaAAAGCCCCCGG‑‑CTCATGAGAACCGGGGGC‑TTTTTGTTGGCTGCCATTATCAGGCAGTACGCACCTCCTCAAAGAGTTCTGGATGGCGATCCAGCAGCTTGa < 1:1951165/107‑1 (MQ=25) aacaaAAAGCCCCCGGTTCTCATGAG‑‑CCGGGGGC‑TTTTTGTTGGCTGCCATTATCAGGCAGTACGCACTTCCTCAAAGAGTTCTGGATGGCGATCCAGCAGCTTGa > 2:1541535/1‑106 (MQ=255) aacaaAAAGCCCCCGGTTCTCATGAG‑‑CCGGGGGC‑TTTTTGTTGGCTGCCATTATCAGGCAGTACGCACTTCCTCAAAGAGTTCTGGATGGCGATCCAGCAGCTTGa < 1:1541535/106‑1 (MQ=255) aacaaAAAGCCCCCGGTTCTCATGAG‑‑CCGGGGGC‑TTTTTGTTGGCTGCCATTATCAGGCAGTACGCACTTCCTCAAAGAGTTCTGGATGGCGATCCAGCAGCTTGAGCAGTTTCACCAACGCCACTGGCGGGGTGGTCTTGCCGTTTTCa > 1:2037668/1‑150 (MQ=255) aaaaGCCCCCGGTTCTCATGAG‑‑CCGGGGGC‑TTTTTGTTGGCTGCCATTATCAGGCAGTACGCACTTCCTCAAAGAGTTCTGGATGGCGATCCAGCAGCTTGAGCAGTTTCACCAACGCCACTGGCGGGGTGGTCTTGCCGTTTTCATAAc > 2:1827924/1‑150 (MQ=255) aaaGCCCCCGGTTCTCATGAG‑‑CCGGGGGC‑TTTTTGTTGGCTGCCATTATCAGGCAGTACGCACTTCCTCaaa > 2:1534060/1‑72 (MQ=255) aaaGCCCCCGGTTCTCATGAG‑‑CCGGGGGC‑TTTTTGTTGGCTGCCATTATCAGGCAGTACGCACTTCCTCaaa < 1:1534060/72‑1 (MQ=255) aaaGCCCCCGGTTCTCATGAG‑‑CCGGGGGC‑TTTTTGTTGGCTGCCATTATCAGGCAGTACGCACTTCCTCAAAGAGTTCTGGATGGCGATCCAGCAGCTTGAGCAGTTTCACCAACGCCACTGGCGGGGTGGTCTTGCCGTTTTCATAACg > 2:70810/1‑150 (MQ=255) aaGCCCCCGGTTCTCATGAG‑‑CCGGGGGC‑TTTTTGTTGGCTGCCATTATCAGGCAGTACGCACTTCCTCAAAGAGTTCTGGATGGCGATCCAGCAGCTTGAGCAGTTTCACCAACGCCACTGGCGGGGTGGTCTTGCCGTTTTCATAACgg < 2:468007/150‑1 (MQ=255) aaGCCCCCGGTTCTCATGAG‑‑CC‑GGGGC‑TTTTTGTTGGCTGCCATTATCAGGCAGTACGCACTTCCTCAAAGAGTTCTGGATGGCGATCCAGCAGCTTGAGCAGTTTCACCAACGCCACTGGCGGGGTGGTCTTGCCGTTTTCATAACggg < 2:303215/150‑1 (MQ=255) ccccGGTTCTCATGAG‑‑CCGGGGGC‑TTTTTGTTGGCTGCCATTATCAGGCAGTACGCACTTCCTCAAAGAGTTCTGGATGGCGATCCAGCAGCTTGAGCAGTTTCACCAACGCCACTGGCGGGGTGGTCTTGCCGTTTTCATAACGGgaga > 1:155907/1‑150 (MQ=255) cccGGTTCTCATGAG‑‑CCGGGGGC‑TTTTTGTTGGCTGCCATTATCAGGCAGTACGCACTTCCTCAAAGAGTTCTGGATGGCGATCCAGCAGCTTGAGCAGTTTCACCAACGCCACTGGCGGGGTGGTCTTGCCGTTTTCa > 1:317738/1‑139 (MQ=255) cccGGTTCTCATGAG‑‑CCGGGGGC‑TTTTTGTTGGCTGCCATTATCAGGCAGTACGCACTTCCTCAAAGAGTTCTGGATGGCGATCCAGCAGCTTGAGCAGTTTCACCAACGCCACTGGCGGGGTGGTCTTGCCGTTTTCa < 2:317738/139‑1 (MQ=255) cccGGTTCTCATGAG‑‑CCGGGGGC‑TTTTTGTTGGCTGCCATTATCAGGCAGTACGCACTTCCTCAAAGAGTTCTGGATGGCGATCCAGCAGCTTGAGCAGTTTCACCAACGCCACTGGCGGGGTGGTCTTGCCGTTTTCATAACGGGAGaa < 1:2014092/150‑1 (MQ=255) ccGGTTCTCATGAG‑‑CCGGGGGC‑TTTTTGTTGGCTGCCATTATCAGGCAGTACGCACTTCCTCAAAGAGTTCTGGa < 1:1297500/75‑1 (MQ=255) ccGGTTCTCATGAG‑‑CCGGGGGC‑TTTTTGTTGGCTGCCATTATCAGGCAGTACGCACTTCCTCAAAGAGTTCTGGATGGCGATCCAGCAGCTTGAGCAGTTTCACCAACGCCACTGGCGGGGTGGTCTTGCCGTTTTCATAACGGGAGAAc < 2:155907/150‑1 (MQ=255) cGGTTCTCATGAG‑‑CCGGGGGC‑TTTTTGTTGGCTGCCATTATCAGGCAGTACGCACTTCCTCAAAGAGTTCTGGATGGCGATCCAGCAGCTTGAGCAGTTTCACCAACGCCACTGGCGGGGTGGTCTTGCCGTTTTCATAACGGGAGAACg > 1:1716222/1‑150 (MQ=255) gTTCTCATGAG‑‑CCGGGGGC‑TTTTTGTTGGCTGCCATTATCAGGCAGTACGCACTTCCTCAAAGAGTTCTGGATGGCGATCCAGCAGCTTGAGCAGTTTCACCAACGCCACTGGCGGGGTGGTCTTGCCGTTTTCATAACGGGAGCACgaa < 1:695615/150‑3 (MQ=255) ttCTCATGAG‑‑CCGGGGGC‑TTTTTGTTGGCTGCCATTATCAGGCAGTACGCACTTCCTCAAAGAGTTCTGGATGGCGATCCAGCAGCTTGAGCAGTTTCACCAACGCCACTGGCGGGGTGGTCTTGCCGTTTTCATAACGGGAGAACGCAt < 2:2211898/150‑1 (MQ=255) | CGCAGAACTGCGTGCACTGCAAGACCTGCGACATCAAGGACCCGGCCCAGAACATCACCTGGGTCACCCCTGAAGGCGCTGGCGGGCCGAACTATCCGAACATGTAAGGCCCCTGCCCTTGCGGCAACAAAAAGCCCCCGGTTCTCATGAG‑‑CCGGGGGC‑TTTTTGTTGGCTGCCATTATCAGGCAGTACGCACTTCCTCAAAGAGTTCTGGATGGCGATCCAGCAGCTTGAGCAGTTTCACCAACGCCACTGGCGGGGTGGTCTTGCCGTTTTCATAACGGGAGAACGCAT > NC_002947/4749918‑4750208 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |