| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,489,830 | Δ1 bp | 6.5% | coding (264/597 nt) | PP_4825 → | MarC family membrane protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,489,830 | 0 | G | . | 6.5% | 290.6 / 14.6 | 93 | coding (264/597 nt) | PP_4825 | MarC family membrane protein |
| Reads supporting (aligned to +/- strand): ref base G (41/45); new base . (3/3); total (44/49) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.12e-01 | |||||||||||
CAACTGGCCTGGAAGGTCGCGTTCGCAGCCTTGGTCGCCAGCGTGTTGCTGTACCTGTTCGGGCGGGCGATCTTCGGAATTTTCGGCATCACCGCCGATGCCTTCCGCATCGGTGCTGGCAGCGTGCTGTTCATTTCGGCCCTGGG‑CATGGCCCAGGGCAAGCCGGCGGTACAGGCAGACAACGTTCAGCAGGATGTGACCATCGTACCGCTGACCATTCCGCTGACCGTTGGCCCCGGCACCATCGGTGCCCTGCTGGTGATGGGGGTGAGCCAGCCGCACTGGGATGAAAAAC > NC_002947/5489681‑5489975 | caaCTGGCCTGGAAGGTCGCGTTCGCAGCCTTGGTCGCCAGCGTGTTGCTGTACCTGTTCGGGCGGGCGATCTTCGGAATTTTCGGCATCACCGCCGATGCCTTCCGCATCGGTGCTGGCAGCGTGCTGTTCATTTCGGCCCTGGG‑CATg < 1:70762/150‑1 (MQ=255) cTGGCCTGGAAGGTCGCGTTCGCAGCCTTGGTCGCCAGCGTGTTGCTGTACCTGTTCGGGCGGGCGATCTTCGGAATTTTCGGCATCACCGCCGATGCCTTCCGCATCGGTGCTGGCAGCGTGCTGTTCATTTCGGCCCTGGG‑CATGGcc < 1:1697414/150‑1 (MQ=255) tGGCCTGGAAGGTCGCGTTCGCAGCCTTGGTCGCCAGCGTGTTGCTGTACCTGTTCGGGCGGGCGATCTTCGGAATTTTCGGCATCACCGCCGATGCCTTCCGCATCGGTGCTGGCAGCGTGCTGTTAATTTCGGCCCTGGG‑CATGGccc > 1:1329264/1‑150 (MQ=255) ggCCTGGAAGGTCGCGTTCGCAGCCTTGGTCGCCAGCGTGTTGCTGTACCTGTTCGGGCGGGCGATCTTCGGAATTTTCGGCATCACCGCCGATGCCGTCCGCATCGGTGCTGGCAGCGTGCTGTTCATTTCGGCCCTGGG‑CATGGCCCa < 2:909491/150‑1 (MQ=255) gCCTGGAAGGTCGCGTTCGCAGCCTTGGTCGCCAGCGTGTTGCTGTACCTGTTCGGGCGGGCGATCTTCGGAATTTTCGGCATCACCGCCGATGCCTTCCGCATCGGTGCTGGCAGCGTGCTGTTCATTTCGGCCCTGGG‑CATGGCCCAg > 2:1640458/1‑150 (MQ=255) ccTGGAAGGTCGCGTTCGCAGCCTTGGTCGCCAGCGTGTTGCTGTACCTGTTCGGGCGGGCGATCTTCGGAATTTTCGGCATCACCGCCGATGCCTTCCGCATCGGTGCTGGCAGCGTGCTGTTCATTTCGGCCCTGGG‑CATGGCCCAgg < 1:2193318/150‑1 (MQ=255) cTGGAAGGTCGCTTTCGCAGCCTTGGTCGCCAGCGTGTTGCTGTACCTGTTCGGGCGGGCGATCTTCGGAATTTTCGGCATCACCGCCGATGCCTTCCGCATCGGTGCTGGCAGCGTGCTGTTCATTTCGGCCCTGGG‑CATGGCCCaccg < 2:603651/150‑4 (MQ=255) cTGGAAGGTCGCGTTCGCAGCCTTGGTCGCCAGCGTGTTGCTGTACCTGTTCGGGCGGGCGATCTTCGGAATTTTCGGCATCACCGCCGATGCCTTCCGCATCGGTGCTGGCAGCGTGCTGTTCATTTCGGCCCTGGGCCAT‑GCCCAggg < 2:1022162/150‑1 (MQ=255) tGGAAGGTCGCGTTCGCAGCCTTGGTCGCCAGCGTGTTGCTGTACCTGTTCGGGCGGGCGATCTTCGGAATTTTCGGCATCACCGCCGATGCCTTCCGCATCGGTGCTGGCAGCGTGCTGTTCATTTCGGCCCTGGG‑CATGGCCCAGGGc > 1:636838/1‑150 (MQ=255) gAAGGTCGCGTTCGCAGCCTTGGTCGCCAGCGTGTTGCTGTACCTGTTCGGGCGGGCGATCTTCGGAATTTTCGGCATCACCGCCGATGCCTTCCGCATCGGTGCTGGCAGCGTGCTGTTCATTTCGGCCCTGGG‑CATGGCCCAGGGCaa < 2:310208/150‑1 (MQ=255) aGGTCGCGTTCGCAGCCTTGGTCGCCAGCGTGTTGCTGTACCTGTTCGGGCGGGCGATCTTCGGAATTTTCGGCATCACCGCCGATGCCTTCCGCATCGGTGCTGGCAGCGTGCTGTTCATTTCGGCCCTGGGCCAT‑GCCCAGGGccgaa < 1:1103134/150‑5 (MQ=255) aGGTCGCGTTCGCAGCCTTGGTCGCCAGCGTGTTGCTGTACCTGTTCGGGCGGGCGATCTTCGGAATTTTCGGCATCACCGCCGATGCCTTCCGCATCGGTGCTGGCAGCGTGCTGTTCATTTCGGCCCTGGG‑CATGGCCCAgg > 2:336140/1‑144 (MQ=255) aGGTCGCGTTCGCAGCCTTGGTCGCCAGCGTGTTGCTGTACCTGTTCGGGCGGGCGATCTTCGGAATTTTCGGCATCACCGCCGATGCCTTCCGCATCGGTGCTGGCAGCGTGCTGTTCATTTCGGCCCTGGG‑CATGGCCCAgg < 1:336140/144‑1 (MQ=255) gTCGCGTTCGCAGCCTTGGTCGCCAGCGTGTTGCTGTACCTGTTCGGGCGGGCGATCTTCGGAATTTTCGGCATCACCGCCGATGCCTTCCGCATCGGTGCTGGCAGCGTGCTGTTCATTTCGGCCCTGGG‑CATGGCCCAgg < 2:1580430/142‑1 (MQ=255) gTCGCGTTCGCAGCCTTGGTCGCCAGCGTGTTGCTGTACCTGTTCGGGCGGGCGATCTTCGGAATTTTCGGCATCACCGCCGATGCCTTCCGCATCGGTGCTGGCAGCGTGCTGTTCATTTCGGCCCTGGG‑CATGGCCCAgg > 1:1580430/1‑142 (MQ=255) tCGCGTTCGCAGCCTTGGTCGCCAGCGTGTTGCTGTACCTGTTCGGGCGGGCGATCTTCGGAATTTTCGGCATCACCGCCGATGCCTTCCGCATCGGTGCTGGCAGCGTGCTGTTCATTTCGGCCCTGGG‑CATGGCCCAGGGCAAGCcgg > 2:2142576/1‑150 (MQ=255) cgcgTTCGCAGCCTTGGTCGCCAGCGTGTTGCTGTACCTGTTCGGGCGGGCGATCTTCGGAATTTTCGGCATCACCGCCGATGCCTTCCGCATCGGTGCTGGCAGCGTGCTGTTCATTTCGGCCCTGGG‑CATGGCCCAGGGCAAGCcggc < 2:1329264/150‑1 (MQ=255) cgTTCGCAGCCTTGGTCGCCAGCGTGTTGCTGTACCTGTTCGGGCGGGCGATCTTCGGAATTTTCGGCATCACCGCCGATGCCTTCCGCATCGGTGCTGGCAGCGTGCTGTTCATTTCGGCCCTGGG‑CATGGCCCAGGGCAAGCcggcgg < 1:2142576/150‑1 (MQ=255) gTTCGCAGCCTTGGTCGCCAGCGTGTTGCTGTACCTGTTCGGGCGGGCGATCTTCGGAATTTTCGGCATCACCGCCGATGCCTTCCGCATCGGTGCTGGCAGCGTGCTGTTCATTTCGGCCCTGGG‑CATGGCCCAGGGCAAGCCGGCGGt > 1:2002269/1‑150 (MQ=255) gCAGCCTTGGTCGCCAGCGTGTTGCTGTACCTGTTCGGGCGGGCGATCTTCGGAATTTTCGGCATCACCGCCGATGCCTTCCGCATCGGTGCTGGCAGCGTGCTGTTCATTTCGGCCCTGGG‑CATGGCCCAGGGCAAGCCGGCGGTACAg > 2:1299912/1‑150 (MQ=255) aGCCTTGGTCGCCAGCGTGTTGCTGTACCTGTTCGGGCGGGCGATCTTCGGAATTTTCGGCATCACCGCCGATGCCTTCCGCATCGGTGCTGGCAGCGTGCTGTTCATTTCGGCCCTGGG‑CATGGCCCAGGGCAAGCCGGCGGTACAGGc > 1:812897/1‑150 (MQ=255) gCCTTGGTCGCCAGCGTGTTGCTGTACCTGTTCGGGCGGGCGATCTTCGGAATTTTCGGCATCACCGCCGATGCCTTCCGCATCGGTGCTGGCAGCGTGCTGTTCATTTCGGCCCTGGG‑CATGGCCCAGGGCAAGCCGGCGGTACAGGCa < 1:649201/150‑1 (MQ=255) gTCGCCAGCGTGTTGCTGTACCTGTTCGGGCGGGCGATCTTCGGAATTTTCGGCATCACCGCCGATGCCTTCCGCATCGGTGCTGGCAGCGTGCTGTTCATTTCGGCCCTGGG‑CATGGCCCAGGGCAAGCCGGCGGTACAGGCAGACAAc < 1:331134/150‑1 (MQ=255) tCGCCAGCGTGTTGCTGTACCTGTTCGGGCGGGCGATCTTCGGAATTTTCGGCATCACCGCCGATGCCTTCCGCATCGGTGCTGGCAGCGTGCTGTTCATTTCGGCCCTGGG‑CATGGCCCAGGGCAAGCCGGCGGTACAGGCAGACAACg > 1:2115557/1‑150 (MQ=255) gtgtTGCTGTACCTGTTCGGGCGGGCGATCTTCGGAATTTTCGGCATCACCGCCGATGCCTTCCGCATCGGTGCTGGCAGCGTGCTGTTCATTTCGGCCCTGGG‑CATGGCCCAGGGCAAGCCGGCGGTACAGGCAGACAACGTTcagcag < 2:70159/150‑1 (MQ=255) gtggCTGTACCTGTTCGGGCGGGCGATCTTCGGAATTTTCGGCATCACCGCCGATGCCTTCCGCATCGGTGGTGGCAGCGTGCTGTTCATTTCGGCCCTGGG‑CATGGCCCAGGGCAAGCCGGCGGTACAGGCAGACAACGTTCAGCAGGa < 2:1755264/147‑1 (MQ=255) cTGTACCTGTTCGGGCGGGCGATCTTCGGAATTTTCGGCATCACCGCCGATGCCTTCCGCATCGGTGCTGGCAGCGTGCTGTTCATTTCGGCCCTGGG‑CATGGCCCAGGGCAAGCCGGCGGTACAGGCAGACAACGTTCAGCAGGAtgtg < 2:2115557/150‑1 (MQ=255) tGTACCTGTTCGGGCGGGCGATCTTCGGAATTTTCGGCATCACCGCCGATGCCTTCCGCATCGGTGCTGGCAGCGTGCTGTTCATTTCGGCCCTGGG‑CATGGCCCAGGGCAAGCCGGCGGTACAGGCAGACAACGTTCAGCAGGATGTGa < 2:812897/150‑1 (MQ=255) tGTACCTGTTCGGGCGGGCGATCTTCGGAATTTTCGGCATCACCGCCGATGCCTTCCGCATCGGTGCTGGCAGCGTGCTGTTCATTTCGGCCCTGGG‑CAGGGCCCAGGGCAAGCCGGCGGTACAGGCAGACAACGTTCAGCAGGATGTGa < 2:2335029/150‑1 (MQ=255) tACCTGTTCGGGCGGGCGATCTTCGGAATTTTCGGCATCACCGCCGATGCCTTCCGCATCGGTGCTGGCAGCGTGCTGTTCATTTCGGCCCTGGG‑CATGGCCCAGGGCAAGCCGGCGGTACAGGCAGACAACGTTcagc > 2:455651/1‑139 (MQ=255) tACCTGTTCGGGCGGGCGATCTTCGGAATTTTCGGCATCACCGCCGATGCCTTCCGCATCGGTGCTGGCAGCGTGCTGTTCATTTCGGCCCTGGG‑CATGGCCCAGGGCAAGCCGGCGGTACAGGCAGACAACGTTcagc < 1:455651/139‑1 (MQ=255) cTGTTCGGGCGGGCGATCTTCGGAATTTTCGGCATCACCGCCGATGCCTTCCGCATCGGTGCTGGCAGCGTGCTGTTCATTTCGGCCCTGGG‑CATGGCCCAGGGCAAGCCGGCGGTACAGGCAGACAACGTTCAGCAGGATGTGACCATc < 2:2002269/150‑1 (MQ=255) ttCGGGCGGGCGATCTTCGGAATTTTCGGCATCACCGCCGATGCCTTCCGCATCGGTGCTGGCAGCGTGCTGTTCATTTCGGCCCTGGG‑CATGGCCCAGGGCAAGCCGGCGGTACAGGCAGACAACGTTCAGCAGGATGTGACCATCGTa < 1:200490/150‑1 (MQ=255) ttCGGGCGGGCGATCTTCGGAATTTTCGGCATCACCGCCGATGCCTTCCGCATCGGTGCTGGCAGCGTGCTGTTCATTTCGGCCCTGGG‑CATGGCCCAGGGCAAGCCGGCGGTACAGGCAGACAACGTTCAGCAGGATGTGACCATCGTa < 1:1952136/150‑1 (MQ=255) gATCTTCGGAATTTTCGGCATCACCGCCGATGCCTTCCGCATCGGTGCTGGCAGCGTGCTGTTCATTTCGGCCCTGGG‑CATGGCCCAGGGCAAGCCGGCGGTACAGGCAGACAACGTTCAGCAAGATGTGACCATCGTACCGCTGACCAt > 1:2333876/1‑150 (MQ=255) aTCTTCGGAATTTTCGGCATCACCGCCGATGCCTTCCGCATCGGTGCTGGCAGCGTGCTGTTCATTTCGGCCCTGGG‑CATGGCCCAGGGCAAGCCGGCGGTACAGGCAGACAACGTTCAGCAGGAt > 1:1083678/1‑126 (MQ=255) aTCTTCGGAATTTTCGGCATCACCGCCGATGCCTTCCGCATCGGTGCTGGCAGCGTGCTGTTCATTTCGGCCCTGGG‑CATGGCCCAGGGCAAGCCGGCGGTACAGGCAGACAACGTTCAGCAGGAt < 2:1083678/126‑1 (MQ=255) ggAATTTTCGGCATCACCGCCGATGCCTTCCGCATCGGTGCTGGCAGCGTGCTGTTCATTTCGGCCCTGGG‑CATGGCCCAGGGCAAGCCGGCGGTACAg > 2:1572838/1‑99 (MQ=255) ggAATTTTCGGCATCACCGCCGATGCCTTCCGCATCGGTGCTGGCAGCGTGCTGTTCATTTCGGCCCTGGG‑CATGGCCCAGGGCAAGCCGGCGGTACAg < 1:1572838/99‑1 (MQ=255) gAATTTTCGGCATCACCGCCGATGCCTTCCGCATCGGTGCTGGCAGCGTGCTGTTCATTTCGGCCCTGGG‑CATGGCCCAGGGCAAGCCGGCGGTACAGGCAGACAACGTTCAGCAGGATGTGACCATCGTACCGCTGACCATTCCGCTGa < 2:2167492/150‑1 (MQ=255) ttttCGGCATCACCGCCGATGCCTTCCGCATCGGTGCTGGCAGCGTGCTGTTCATTTCGGCCCTGGG‑CATGGCCCAGGGCGAGCAGGCGGTACAGGCAGACAACGTTCAGCAGGATGTGACCATCGTACCGCTGACCATTCCGCTGACCg > 1:2349376/1‑150 (MQ=255) ttttCGGCATCACCGCCGATGCCTTCCGCATCGGTGCTGGCAGCGTGCTGTTCATTTCGGCCCTGGG‑CATGGCCCAGGGCAAGCCGGCGGTACAGGCAGACGACGTTCAGCAGGATGTGACCATCGTACCGCTGACCATTCCGCTGACCg > 2:1613073/1‑150 (MQ=255) ttttCGGCATCACCGCCGATGCCTTCCGCATCGGTGCTGGCAGCGTGCTGTTCATTTCGGCCCTGGG‑CATGGCCCAGGGCAAGCCGGCGGTACAGGCAGACAACGTTCAGCAGGATGTGACCATCGTACCGCTGACCATTCCGCTGACCg > 2:2063445/1‑150 (MQ=255) ttCGGCATCACCGCCGATGCCTTCCGCATCGGTGCTGGCAGCGTGCTGTTCATTTCGGCCCTGGG‑CATGGCCCAGGGCAAGCCGGCGGTACAGGCAGACAACGTTCAGCAGGATGTGACCATCGTACCGCTGACCATTCCGCTGACCGtt < 2:2394998/150‑1 (MQ=255) tCGGCATCACCGCCGATGCCTTCCGCATCGGTGCTGGCAGCGTGCTGTTCATTTCGGCCCTGGG‑CATGGCCCAGGGCAAGCCGGCGGTACAGGCAGACAACGTTCAGCAGGATGTGACCATCGTACCGCTGACCATTCCGCTGACCGTTg < 2:1818632/150‑1 (MQ=255) gCATCACCGCCGATGCCTTCCGCATCGGTGCTGGCAGCGTGCTGTTCATTTCGGCCCTGGG‑CATGGCCCAGGGCAAGCCGGCGGTACAGGCAGACAACGTTCAGCAGGATGTGa > 1:766864/1‑114 (MQ=255) gCATCACCGCCGATGCCTTCCGCATCGGTGCTGGCAGCGTGCTGTTCATTTCGGCCCTGGG‑CATGGCCCAGGGCAAGCCGGCGGTACAGGCAGACAACGTTCAGCAGGATGTGa < 2:766864/114‑1 (MQ=255) accACCTCCGATGCCTTCCGCATCGGTGCTGGCAGCGTGCTGTTCATTTCGGCCCTGGG‑CATGGCCCAGGGCAAGCCGGCGGTACAGGCAGACAACGTTCAGCAGGATGTGACCATCGTACCGCTGACCATTCCGCTGACCGTTgg > 2:602460/3‑146 (MQ=255) aTCACCGCCGATGCCTTCCGCATCGGTGCTGGCAGCGTGCTGTTCATTTCGGCCCTGGG‑CATGGCCCAGGGCAAGCCGGCGGTACAGGCAGACAACGTTCAGCAGGATGTGACCATCGTACCGCTGACCATTCCGCTGACCGTTgg < 1:602460/146‑1 (MQ=255) aCCGCCGATGCCTTCCGCATCGGTGCTGGCAGCGTGCTGTTCATTTCGGCCCTGGG‑CATGGCCCAGGGCAAGCCGGCGGTACAGGCAGACAACGTTcagcag < 1:1413779/102‑1 (MQ=255) aCCGCCGATGCCTTCCGCATCGGTGCTGGCAGCGTGCTGTTCATTTCGGCCCTGGG‑CATGGCCCAGGGCAAGCCGGCGGTACAGGCAGACAACGTTcagcag > 2:1413779/1‑102 (MQ=255) aCCGCCGATGCCTTCCGCATCGGTGCTGGCAGCGTGCTGTTCATTTCGGCCCTGGG‑CATGGCCCAGGGCAAGCCGGCGGTACAGGCAGACAACGTTCAGCAGGATGTGACCATCGTACCGCTGACCATTCCGCTGACCGTTGGCCCCGGc > 2:699764/1‑150 (MQ=255) ccgATGCCTTCCGCATCGGTGCTGGCAGCGTGCTGTTCATTTCGGCCCTGGG‑CATGGCCCAGGGCAAGCCGGCGGTACAGGCAGACAACGTTCAGCAGGATGTGACCATCGTACCGCTGACCAtt > 2:1774831/1‑125 (MQ=255) ccgATGCCTTCCGCATCGGTGCTGGCAGCGTGCTGTTCATTTCGGCCCTGGG‑CATGGCCCAGGGCAAGCCGGCGGTACAGGCAGACAACGTTCAGCAGGATGTGACCATCGTACCGCTGACCAtt < 1:1774831/125‑1 (MQ=255) cagccGCATCGGTGCTGGCAGCGTGCTGTTCATTTCGGCCCTGGG‑CATGGCCCAGGGCAAGCCGGCGGTACAGGCAGACAACGTTCAGCAGGATGTGACCATCGTACCGCTGACCATTCCGCTGACCGTTGGCCCCGGCACCATCGGTGc > 2:2402020/4‑150 (MQ=255) cTTCCGCATCGGTGCTGGCAGCGTGCTGTTCATTTCGGCCCTGGG‑CATGGCCCAGGGCAAGCCGGCGGTACAGGCAGACAACGTTCAGCAGGATGTGa > 2:2402043/1‑98 (MQ=255) cTTCCGCATCGGTGCTGGCAGCGTGCTGTTCATTTCGGCCCTGGG‑CATGGCCCAGGGCAAGCCGGCGGTACAGGCAGACAACGTTCAGCAGGATGTGa > 2:2402092/1‑98 (MQ=255) cTTCCGCATCGGTGCTGGCAGCGTGCTGTTCATTTCGGCCCTGGG‑CATGGCCCAGGGCAAGCCGGCGGTACAGGCAGACAACGTTCAGCAGGATGTGa < 1:2402043/98‑1 (MQ=255) cTTCCGCATCGGTGCTGGCAGCGTGCTGTTCATTTCGGCCCTGGG‑CATGGCCCAGGGCAAGCCGGCGGTACAGGCAGACAACGTTCAGCAGGATGTGACCATCGTACCGCTGACCATTCCGCTGACCGTTGGCCCCGGCACCATCGGTGc > 1:1710828/1‑150 (MQ=255) cTTCCGCATCGGTGCTGGCAGCGTGCTGTTCATTTCGGCCCTGGG‑CATGGCCCAGGGCAAGCCGGCGGTACAGGCAGACAACGTTCAGCAGGATGCGa < 1:2402092/98‑1 (MQ=255) aTCGGTGCTGGCAGCGTGCTGTTCATTTCGGCCCTGGG‑CATGGCCCAGGGCAAGCCGGCGGTACAGGCAGACAACGTTCAGCAGGATGTGACCATCGTACCGCTGACCATTCCGCTGACCGTTGGCCCCGGCACCATCGGTGCCctgctg > 2:649074/1‑150 (MQ=255) aTCGGTGCTGGCAGCGTGCTGTTCATTTCGGCCCTGGG‑CATGGCCCAGGGCAAGCCGGCGGTACAGGCAGACAACGTTCAGCAGGATGTGACCATCGTACCGCTGACCATTCCGCTGACCGTTGGCCCCGGCACCATCGGTGCCctgctg > 2:678256/1‑150 (MQ=255) ggTGCTGGCAGCGTGCTGTTCATTTCGGCCCTGGG‑CATGGCCCAGGGCAAGCCGGCGGTACAGGCAGACAACGTTCAGCAGGATGTGACCATCGTACCGCTGACCATTCCGCTGACCGTTGGCCCCGGCACCATCGGTGCCCTGCTGGTg < 1:2063445/150‑1 (MQ=255) gTGCTGGCAGCGTGCTGTTCATTTCGGCCCTGGG‑CATGGCCCAGGGCAAGCCGGCGGTACAGGCAGACAACGTTCAGCAGGATGTGACCATCGTACCGCTGACCATTCCGCTGACCGTTGGCCCCGGCACCATCGGTGCCCTGCTggctc > 2:488934/1‑147 (MQ=255) cTGGCAGCGTGCTGTTCATTTCGGGCCTGGG‑CACGCCGCAGGGCAAGCCGGCGATACAGGCAGACAACGTTTAGCAGGATGTGACCATCGTACCGCTGACCATTCCGCTGACCGTTGGCCCCGGCACCATCGGTGCCCtgctggtgctgg > 1:572327/1‑150 (MQ=255) cTGGCAGCCTGCTGTCACATCCGGCCCTGGG‑CATGCACCCGGGCCCGCAGGAGGTACAGGCAGAAAACGTCCAGCAGGATGTGACCATCGTACCGCTGACCATTCCGCTGACCGTTGGCCCCGGCACCATCGGTGCCCTGCTGGTGATgg < 2:1109433/150‑1 (MQ=255) ggCAGCGTGCTGTTCATTTCGGCCCTGGG‑CATGGCCCAGGGCAAGCCGGCGGTACAGGCAGACAACGTTCAGCAGGATGTGACCATCGTACCGCTGACCATTCCGCTGACCGTTGGCCCCGGCACCATCGGTGCCCTGCTGGTGATgggg < 2:668583/150‑1 (MQ=255) ggCAGCGTGCTGTTCATTTCGGCCCTGGG‑CATGGCCCAGGGCAAGCCGGCGGTACAGGCAGACAACGTTCAGCAGGATGTGACCATCGTACCGCTGACCATTCCGCTGACCGTTGGCCCCGGCACCATCGGTGCCCTGCTGGTGATgggg < 1:1299912/150‑1 (MQ=255) gCAGCGTGCTGTTCATTTCGGCCCTGGG‑CATGGCCCAGGGCAAGCcggcgg < 2:1469032/51‑1 (MQ=255) gCAGCGTGCTGTTCATTTCGGCCCTGGG‑CATGGCCCAGGGCAAGCcggcgg > 1:1469032/1‑51 (MQ=255) gCAGCGTGCTGTTCATTTCGGCCCTGGG‑CATGGCCCAGGGCAAGCCGGCGGTACAGGCAGACAACGTTCAGCAGGATGTGACCATCGTACCGCTGACCATTCCGCTGACCGTTGGCCCCGGCACCATCGGTGCCCTGCTGGTGATggggg > 2:2312684/1‑150 (MQ=255) gCGGGCTGTGCATTTCGTCCCTGGG‑CATGGCCCAGGGCAAGCCGGCGGTACAGGCAGACAACGTTCAGCAGGATGTGACCATCGTACCGCTGACCATTCCGCTGACCGTTGGCCCCGGCACCATCGGTGCCCTGCTGGTGATGGGGGTGa < 2:1112736/150‑1 (MQ=255) gTTCATTTCGGCCCTGGG‑CATGGCCCAGGGCAAGCCGGCGGTACAGGCAGACAACGTTCAGCAGGATGTGACCATCGTACCGCTGACCATTCCGCTGACCGTTGGCCCCGGCACCATCGGTGCCCTGCTGGTGATGGGGGTGagccagcc > 1:431872/1‑150 (MQ=255) ttCATTTCGGCCCTGGG‑CATGGCCCAGGGCAAGCCGGCGGTACAGGCAGACAACGTTcagca > 1:2202468/1‑62 (MQ=255) ttCATTTCGGCCCTGGG‑CATGGCCCAGGGCAAGCCGGCGGTACAGGCAGACAACGTTcagca < 2:2202468/62‑1 (MQ=255) aTTTCGGCCCTGGG‑CATGGCCCAGGGCAAGCCGGCGGTACAGGCAGACAACGTTCAGCAGGATGTGACCATCGTACCGCTGACCATTCCGCTGACCGTTGGCCCCGGCACCATCGGTGCCCTGCTGGTGATGGGGGTGAGCCAGCCGCAc > 1:2212707/1‑150 (MQ=255) tttCGGCCCTGGG‑CATGGCCCAGGGCAAGCCGGCGGTACAGGCAGACAACGTTCAGCAGGATGTGACCATCGTAcc < 2:950200/76‑1 (MQ=255) tttCGGCCCTGGG‑CATGGCCCAGGGCAAGCCGGCGGTACAGGCAGACAACGTTCAGCAGGATGTGACCATCGTAcc > 1:950200/1‑76 (MQ=255) ttCGGCCCTGGG‑CATGGCCCAGGGCAAGCCGGCGGTACAGGCAGACAACGTTCAGCAGGATGTGACCATCGTACCGCTGACCATTCCGCTGACCGTTGGCCCCGGCACCATCGGTGCCCTGCTGGTGATGGGGGTGAGCCAGCCGCACTg < 1:649074/150‑1 (MQ=255) ttgCCCTGGG‑CATGGCCCAGGGCAAGCCGGCGGTACAGGCAGACAACGTTCAGCAGGATGTGACCATCGTACCGCTGACCATTCCGCTGACCGTTGGCCCCGGCACCATCGGTGCCCTGCTGGTGATgg > 1:607662/3‑129 (MQ=255) ttgCCCTGGG‑CATGGCCCAGGGCAAGCCGGCGGTACAGGCAGACAACGTTCAGCAGGATGTGACCATCGTACCGCTGACCATTCCGCTGACCGTTGGCCCCGGCACCATCGGTGCCCTGCTGGTGATgg < 2:607662/127‑1 (MQ=255) cGGCCCTGGG‑CATGGCCCAGGGCAAGCCGGCGGTACAGGCAGACAACGTTCAGCAGGATGTGACCATCGTACCGCTGACCATTCCGCTGACCGTTGGCCCCGGCACCATCGGt > 1:689665/1‑113 (MQ=255) cGGCCCTGGG‑CATGGCCCAGGGCAAGCCGGCGGTACAGGCAGACAACGTTCAGCAGGATGTGACCATCGTACCGCTGACCATTCCGCTGACCGTTGGCCCCGGCACCATCGGt < 2:689665/113‑1 (MQ=255) gCCCTGGG‑CATGGCCCAGGGCAAGCCGGCGGTACAGGCAGACAACGTTCAGCAGGATGTGACCATCGTACCGCTGACCATTCCGCTGACCGTTGGCCCCGGCACCATCGGTGCCCTGCTGGTGATGGGGGTGAGCCAGCCGCACTGGGAt < 2:1381115/150‑1 (MQ=255) cccTGGGCCAT‑GCCCAGGGCAAGCCGGCGGTACAGGCAGACAACGTTCAGCAGGATGTGACCATCGTACCGCTGACCATTCCGCTGACCGTTGGCCTCGGCACCATCGGTGCCCTGCTgg < 2:1580519/120‑1 (MQ=255) cccTGGGCCAT‑GCCCAGGGCAAGCCGGCGGTACAGGCAGACAACGTTCAGCAGGATGTGACCATCGTACCGCTGACCATTCCGCTGACCGTTGGCCCCGGCACCATCGGTGCCCTGCTgg > 1:1580519/1‑120 (MQ=255) cccTGGGCCAT‑GCCCAGGGCAAGCCGGCGGTACAGGCAGACAACGTTCAGCAGGATGTGACCATCGTACCGCTGACCATTCCGCTGACCGTTGGCCCCGGCACCATCGGTGCCCTGCTGGTGATGGGGGTGAGCCAGCCGCACTGGGAt > 2:863862/1‑149 (MQ=255) cccTGGGCCAT‑GCCCAGGGCAAGCCGGCGGTACAGGCAGACAACGTTCAGCAGGATGTGACCATCGTACCGCTGACCATTCCGCTGACCGTTGGCCCCGGCACCATCGGTGCCCTGCTGGTGATGGGGGTGAGCCAGCCGCACTGGGATg > 2:304560/1‑150 (MQ=255) cccTGGG‑CCATGCCCAGGGCAAGCCGGCGGTACAGGCAGACAACGTTCAGCAGGATGTGACCATCGTACCGCTGACCATTCCGCTGACCGTTGGCCCCGGCACCATCGGTGCCCTGCTGGTGATGGGGGTGAGCCAGCCGCACTGGGAt < 1:863862/149‑1 (MQ=255) cccTGGG‑CATGGCCCAGGGCAAGCCGGCGGTACAGGCAGACAACGTTCAGCAGGATGTGACCATCGTACCGCTGACCATTCCGCTGACCGTTGGCCCCGGCACCATCGGTGCCCTGCTGGTGATGGGGGt > 1:946985/1‑130 (MQ=255) cccTGGG‑CATGGCCCAGGGCAAGCCGGCGGTACAGGCAGACAACGTTCAGCAGGATGTGACCATCGTACCGCTGACCATTCCGCTGACCGTTGGCCCCGGCACCATCGGTGCCCTGCTGGTGATGGGGGt < 2:946985/130‑1 (MQ=255) cTGGG‑CATGGCCCAGGGCAAGCCGGCGGTACAGGCAGACAACGTTCAGCAGGATGTGACCATCGTACCGCTGACCATTCCGCTGACCGTTGGCCCCGGCACCATCGGTGCCCTGCTGGTGATGGGGGTGagccagc > 2:1068112/1‑136 (MQ=255) cTGGG‑CATGGCCCAGGGCAAGCCGGCGGTACAGGCAGACAACGTTCAGCAGGATGTGACCATCGTACCGCTGACCATTCCGCTGACCGTTGGCCCCGGCACCATCGGTGCCCTGCTGGTGATGGGGGTGagccagc < 1:1068112/136‑1 (MQ=255) g‑CATGGCCCAGGGCAAGCCGGCGGTACAGGCAGACAACGTTCAGCAGGATGTGACCATCGTACCGCTGACCATTCCGCTGACCGTTGGCCCCGGCACCATCGGTGCCCTGCTGGTGATGGGGGTGAGCCAGCCGCACTGGGATGAAAAAc > 2:2019430/1‑150 (MQ=255) | CAACTGGCCTGGAAGGTCGCGTTCGCAGCCTTGGTCGCCAGCGTGTTGCTGTACCTGTTCGGGCGGGCGATCTTCGGAATTTTCGGCATCACCGCCGATGCCTTCCGCATCGGTGCTGGCAGCGTGCTGTTCATTTCGGCCCTGGG‑CATGGCCCAGGGCAAGCCGGCGGTACAGGCAGACAACGTTCAGCAGGATGTGACCATCGTACCGCTGACCATTCCGCTGACCGTTGGCCCCGGCACCATCGGTGCCCTGCTGGTGATGGGGGTGAGCCAGCCGCACTGGGATGAAAAAC > NC_002947/5489681‑5489975 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |