| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 96,131 | Δ1 bp | 8.5% | coding (554/1005 nt) | PP_0088 ← | alkanal monooxygenase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 96,131 | 0 | C | . | 8.5% | 327.9 / 25.8 | 106 | coding (554/1005 nt) | PP_0088 | alkanal monooxygenase |
| Reads supporting (aligned to +/- strand): ref base C (45/52); new base . (4/5); total (49/57) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.65e-01 | |||||||||||
Only 100 of 108 total aligned reads displayed.
TCTCGTCGGTCTGCGCCACCACCATGGGAATGCCCAGCATCACATACGGCTTGTCCAGCGTGGTCGAGGGCTTGAAATGGTTGCGGTACACGCGAATGGCCTCGTGCATGTAGCGTGGCGCGAAATGCGAGGCGAAGGCGTAGGGCATGCCGC‑GCATGCCCGCCAGCTGGGCACTGAACAGGCTGGATCCCAGCAACCACATCGGCACGTCGGTGTCGTACCCCGGTACGGCGATCACTTTTTGATCATCAGTGCGTGGCCCGAGGTAGCGCGAAAGCTCCTCGACATCGTCTGGGAA > NC_002947/95982‑96279 | tctcGTCGGTCTGCGCCACCACCATGGGAATGCCCAGCATCACATACGGCTTGTCCAGCGTGGTCGAGGGCTTGAAATGGTTGCGGTACACGCGAATGGCCTCGTGCATGTAGCGTGGCGCGAAATGCGAGGCGAAGGCGTAGGGCATGc > 2:2038592/1‑150 (MQ=255) atcgGTCTGCGCCACCACCATGGGAATACCCAGCATCACATACGGCTTGTCCAGCGTGGTCGAGGGCTTGAAATGGTTGCGGTACACACGAATGGCCTCGTGAATATAGCGTGGCGCGAAATGCAAGGCGAAGGCGTAAGGCATTcccgg > 1:1893408/2‑147 (MQ=255) cgGTCTGCGCCACCACCATGGGAATGCCCAGCATCACATACGGCTTGTCCAGCGTGGTCGAGGGCTTGAAATGGTTGCGGTACACGCGAATGGCCTCGTGCATGTAGCGTGGCGCGAAATGCGAGGCGAAGGCGTAGGGCATGCCGC‑GCa < 2:1261731/150‑1 (MQ=255) ggTCTGCGCCACCACCATGGGAATGCCCAGCATCACATACGGCTTGTCCAGCGTGGTCGAGGGCTTGAAATGGTTGCGGTACACGCGAATGGCCTCGTGCATGTAGCGTGGCGCGAAATGCGAGGCGAAGGCGTAGGGCATGCCGC‑GCAt < 1:1115840/150‑1 (MQ=255) gTCTGCGCCACCACCATGGGAATGCCCAGCATCACATACGGCTTGTCCAGCGTGGTCGAGGGCTTGAAATGGTTGCGGTACACGCGAATGGCCTCGTGCATGTAGCGTGGCGCGAAATGCGAGGCGAAGGCGTAGGGCATGCCGC‑GCATg > 1:937169/1‑150 (MQ=255) tCTGCGCCACCACCATGGGAATGCCCAGCATCACATACGGCTTGTCCAGCGTGGTCGAGGGCTTGAAATGGTTGCGGTACACGCGAATGGCCTCGTGCATGTAGCGTGGCGCGAAATGCGAGGCGAAGGCGTAGGGCATGCCGC‑GCATGc < 2:1111862/150‑1 (MQ=255) cgcCACCACCATGGGAATGCCCAGCATCACATACGGCTTGTCCAGCGTGGTCGAGGGCTTGAAATGGTTGCGGTACACGCGAATGGCCTCGTGCATGTAGCGTGGCGCGAAATGCGAGGCGAAGGCGTAGGGCATGCCGC‑GCATGCCCGc < 1:1226647/150‑1 (MQ=255) gcCACCACCATGGGAATACCCCGCATCACATACGACCTGTCCAGCTGTGTCGAGGGCTTGAAATGGTTGCGGTACACGCGAATGGCCTCGTGCATGTAGCGTGGCGCGAAATGCGAGGCGAAGGCGTAGGGCATGCGCG‑GCATGccctac < 2:2071607/150‑4 (MQ=255) ccaccaccaTGGGAATGCCCAGCATCACATACGGCTTGTCCAGCGTGGTCGAGGGCTTGAAATGGTTGCGGTACACGCGAATGGCCTCGTGCATGTAGCGTGGCGCGAAATGCGAGGCGAAGGCGTAGGGCATGCCGC‑GCATGCCCGCCa < 1:282317/150‑1 (MQ=255) caccaTGGGAATGCCCAGCATCACATACGGCTTGTCCAGCGTGGTCGAGGGCTTGAAATGGTTGCGGTACACGCGAATGGCCTCGTGCATGTAGCGTGGCGCGAAATGCCAGGCGAAGGCGTAGGGCATGCCGC‑GCATGCCCGCCAGCTg < 1:2292631/150‑1 (MQ=255) caTGGGAATGCCCAGCATCACATACGGCTTGTCCAGCGTGGTCGAGGGCTTGAAATGGTTGCGGTACACGCGAATGGCCTCGTGCATGTAGCGTGGCGCGAAATGCGAGGCGAAGGCGTAGGGCATG‑CGCGGCATGccctac > 2:2286463/1‑139 (MQ=255) caTGGGAATGCCCAGCATCACATACGGCTTGTCCAGCGTGGTCGAGGGCTTGAAATGGTTGCGGTACACGCGAATGGCCTCGTGCATGTAGCGTGGCGCGAAATGCGAGGCGAAGGCGTAGGGCATG‑CGCGGCATGccctac < 1:2286463/142‑4 (MQ=255) gAATGCCCAGCATCACATACGGCTTGTCCAGCGTGGTCGAGGGCTTGAAATGGTTGCGGTACACGCGAATGGCCTCGTGCATGTAGCGTGGCGCGAAATGCGAGGCGAAGGCGTAGGGCATGCCGC‑GCATGCCCGCCAGCTGGGCACTGa < 2:937169/150‑1 (MQ=255) tGCCCAGCATCACATACGGCTTGTCCAGCGTGGTCGAGGGCTTGAAGTGGTTGCGGTACACGCGAATGGCCTCGTGCATGTAGCGTGGCGCGAAATGCGAGGCGAAGGCGTAGGGCATGCCGC‑GCATGCCCGCCAGCTGGGCACTGAACa < 1:1343716/150‑1 (MQ=255) cccAGCATCACATACGGCTTGTCCAGCGTGGTCGAGGGCTTGAAATGGTTGCGGTACACGCGAATGGCCTCGTGCATGTAGCGTGGCGCGAAATGCGAGGCGAAGGCGTAGGGCATGCCGC‑GCATGCCCGCCAGCTGGGCACTGAACAgg > 2:1902796/1‑150 (MQ=255) ccAGCATCACATACGGCTTGTCCAGCGTGGTCGAGGGCTTGAAATGGTTGCGGTACACGCGAATGGCCTCGTGCATGTAGCGTGGCGCGAAATGCGAGGCGAAGGCGTAGGGCATGCCGC‑GCATGCCCGCCAGCTGGGCACTGAACAGGc < 2:615564/150‑1 (MQ=255) ccAGCATCACATACGGCTTGTCCAGCGTGGTCGAGGGCTTGAAATGGTTGCGGTACACGCGAATGGCCTCGTGCATGTAGCGTGGCGCGAAATGCGAGGCGAAGGCGTAGGGCATGCCGC‑GCATGCCCGCCAGCTGGGCACTGAACAGGc > 1:1663821/1‑150 (MQ=255) aGCATCACATACGGCTTGTCCAGCGTGGTCGAGGGCTTGAAATGGTTGCGGTACACGCGAATGGCCCCGTGCATGTAGCGTGGCGCGAAATGCGAGGCGAAGGCGTAGGGCATGCCGC‑GCATGCCCGCCAGCTGGGCACTGAACAGGCTg < 1:1280039/150‑1 (MQ=255) gaaTCACATACGGCTTGTCAAGCGTGGTCGAGGGCTTGAAATGGTTGCGGTACACGCGAATGGCCTCGTGCATGTAGCGTGGCGCGAAATGCGAGGCGAAGGCGTAGGGCATGCCGC‑GCATGCCCGCCAACTGGGCACTGAAc > 1:940811/3‑143 (MQ=255) gaaTCACATACGGCTTGTCAAGCGTGGTCGAGGGCTTGAAATGGTTGCGGTACACGCGAATGGCCTCGTGCATGTAGCGTGGCGCGAAATGCGAGGCGAAGGCGTAGGGCATGCCGC‑GCATGCCCGCCAACTGGGCACTGAAc < 2:940811/141‑1 (MQ=255) aTCACATACGGCTTGTCCAGCGTGGTCGAGGGCTTGAAATGGTTGCGGTACACGCGAATGGCCTCGTGCATGTAGCGTGGCGCGAAATGCGAGGCGAAGGCGTAGGGCATGCCGC‑GCATGCCCGCCAGCTGGGCACTGAACAGGCTGGAt > 2:1535125/1‑150 (MQ=255) acaTACGGCTTGTCCAGCGTGGTCGAGGGCTTGAAATGGTTGCGGTACACGCGAATGGCCTCGTGCATGTAGCGTGGCGCGAAATGCGAGGCGAAGGCGTAGGGCATGCCGC‑GCATGCCCGCCAGCTGGGCACTGAACAGGCTGGATccc < 2:1663821/150‑1 (MQ=255) caTACGGCTTGTCCAGCGTGGTCGAGGGCTTGAAATGGTTGCGGTACACGCGAATGGCCTCGTGCATGTAGCGTGGCGCGAAATGCGAGGCGAAGGCGTAGGGCATGCCGC‑GCATGCCCGCCCGCGGTGCACTGAACAGGCTGGATCCCa < 1:1530960/150‑1 (MQ=255) caTACGGCTTGTCCAGCGTGGTCGAGGGCTTGAAATGGTTGCGGTACACGCGAATGGCCTCGTGCATGTAGCGTGGCGCGAAATGCGAGGCGAAGGCGTAGGGCATGCCGC‑GCATGCCCGCCAGCTGGGCACTGAACAGGCTGGATCCCa < 1:142380/150‑1 (MQ=255) caTACGGCTTGTCCAGCGTGGTCGAGGGCTTGAAATGGTTGCGGTACACGCGAATGGCCTCGTGCATGTAGCGTGGCGCGAAATGCGAGGCGAAGGCGTAGGGCATGCCGC‑GCATGCCCGCCAGCTGGGCACTGAACAGGCTGGATCCCa < 1:1902796/150‑1 (MQ=255) gCTTGTCCAGCGTGGTCGAGGGCTTGAAATGGTTGCGGTAGACGCGAATGGCCTCGTGCATGTAGCGTGGCGCGAAATGCGAGGCGAAGGCGTAGGGCATGCCgc‑gc > 1:424874/1‑107 (MQ=255) gCTTGTCCAGCGTGGTCGAGGGCTTGAAATGGTTGCGGTACACGCGAATGGCCTCGTGCATGTAGCGTGGCGCGAAATGCGAGGCGAAGGCGTAGGGCATGCCgc‑gc < 2:424874/107‑1 (MQ=255) ttGTCCAGCGTGGTCGAGGGCTTGAAATGGTTGCGGTACACGCGAATGGCCTCGTGCATGTAGCGTGGCGCGAAATGCGAGGCGAAGGCGTTGGGCATG‑CGCGGCATGccctac > 1:1861783/1‑111 (MQ=255) ttGTCCAGCGTGGTCGAGGGCTTGAAATGGTTGCGGTACACGCGAATGGCCTCGTGCATGTAGCGTGGCGCGAAATGCGAGGCGAAGGCGTTGGGCATG‑CGCGGCATGccctac < 2:1861783/114‑4 (MQ=255) ttGTCCAGCGTGGTCGAGGGCTTGAAATGGTTGCGGTACACGCGAATGGCCTCGTGCATGTAGCGTGGCGCGAAATGCGAGGCGAAGGCGTAGGGCATGCCGC‑GCATGCCCGCCAGCTGGGCACTGAACAGGCTGGATCCCAGCAAc > 1:909024/1‑147 (MQ=255) ttGTCCAGCGTGGTCGAGGGCTTGAAATGGTTGCGGTACACGCGAATGGCCTCGTGCATGTAGCGTGGCGCGAAATGCGAGGCGAAGGCGTAGGGCATGCCGC‑GCATGCCCGCCAGCTGGGCACTGAACAGGCTGGATCCCAGCAAc < 2:909024/147‑1 (MQ=255) tCCAGCGTGGTCGGGGGCTTGAAATGGTTGCGGTACACGCGAATGGCCTGGTGCATGTAGCGTGGCGCGAAATGCGAGGCGAAGGCGTAGGGCATGCCGC‑GCATGCCCGCCAGCTGGGCACTGAACAGGCTGGATCCCAGCAACCACATc < 1:921328/150‑1 (MQ=255) ccAGCGTGGTCGAGGGCTTGAAATGGTTGCGGTACACGCGAATGGCCTCGTGCATGTAGCGTGGCGCGAAATGCGAGGCGAAGGCGTAGCGCATGCCGC‑GCATGCCCGCCAGCTGGGCACTGAACAGGCTGGATCCCAGCAACCACATCg < 2:285415/150‑1 (MQ=255) cAGCGTGGTCGAGGGCTTGAAATGGTTGCGGTACACGCGAATGGCCTCGTGCATGTAGCGTGGCGCGAAATGCGAGGCGAAGGCGTAGGGCATGCCGC‑GCATGCCCGCCAGCTGGGCACTGAACAGGCTGGATCCCAGCAACCACATCgg > 2:1442826/1‑150 (MQ=255) cGTGGTCGAGGGCTTGAAATGGTTGCGGTACACGCGAATGGCCTCGTGCATGTAGCGTGGCGCGAAATGCGAGGCGAAGGCGTAGGGCATGCCGC‑GCATGCCCGCCAGCTGGGCACTGAACAGGCTGGATCCCAGCAACCACATCGGCAc < 2:2267380/150‑1 (MQ=255) tCGAGGGCTTGAAATGGTTGCGGTACACGCGAATGGCCTCGTGCATGTAGCGTGGCGCGAAATGCGAGGCGAAGGCGTAGGGCATGCCGC‑GCATGCCCGCCAGCTGGGCACTGAACAGGCTGGATCCCAGCAACcac > 2:2288606/1‑137 (MQ=255) tCGAGGGCTTGAAATGGTTGCGGTACACGCGAATGGCCTCGTGCATGTAGCGTGGCGCGAAATGCGAGGCGAAGGCGTAGGGCATGCCGC‑GCATGCCCGCCAGCTGGGCACTGAACAGGCTGGATCCCAGCAACcac < 1:2288606/137‑1 (MQ=255) cGAGGGCTTGAAATGGTTGCGGTACACGCGAATGGCCTCGTGCATGTAGCGTGGCGCGAAATGCGAGGCGAAGGCGTAGGGCATGCCGC‑GCATGCCCGCCAGCTGGGCACt > 2:795571/1‑111 (MQ=255) cGAGGGCTTGAAATGGTTGCGGTACACGCGAATGGCCTCGTGCATGTAGCGTGGCGCGAAATGCGAGGCGAAGGCGTAGGGCATGCCGC‑GCATGCCCGCCAGCTGGGCACt < 1:795571/111‑1 (MQ=255) cGAGGGCTTGAAATGGTTGCGGTACACGCGAATGGCCTCGTGCATGTAGCGTGGCGCGAAATGCGAGGCGAAGGCGTAGGGCATGCCGC‑GCATGCCCGCCAGCTGGGCACTGAACAGGCTGGATCCCAGCAACCACATCGGCACGTCGgt < 1:1476610/150‑1 (MQ=255) aGGGCTTGAAATGGTTGCGGTACACGCGAATGGCCTCGTGCATGTAGCGTGGCGCGAAATGCGAGGCGAAGGCGTAGGGCATGCCGC‑GCATGCCCGCCAGCTGGGCACTGAACAGGCTGGATCCCAGCAACCACATCGGCACGTCGgtgt > 2:1800733/1‑150 (MQ=255) gCTTGAAATGGTTGCGGTACACGCGAATGGCCTCGTGCATGTAGCGTGGCGCGAAATGCGAGGCGAAGGCGTAGGGCATGCCGC‑GCATGCCCGCCAGCTggg > 2:806504/1‑102 (MQ=255) gCTTGAAATGGTTGCGGTACACGCGAATGGCCTCGTGCATGTAGCGTGGCGCGAAATGCGAGGCGAAGGCGTAGGGCATGCCGC‑GCATGCCCGCCAGCTggg < 1:806504/102‑1 (MQ=255) tGAAATGGTTGCGGTACACGCGAATGGCCTCGTGCATGTAGCGTGGCGCGAAATGCGAGGCGAAGACGTAGGGCATGCACG‑TCTGGCCCGCCAGCTGGGCACTGAACAGGCTGGATTCCAGAAACCCAATGGGATCGTCTGTGTCGTAcc > 1:761379/1‑150 (MQ=255) gAAATGGTTGCGGTACACGCGAATGGCCTCGTGCATGTAGCGTGGCGCGAAATGCGAGGCGAAGGCGTAGGGCATGCCGC‑GCATGCCCGCCAGCTGGGCACTGAACAGGCTGGATCCCAGCAACCACATCGGCACGTCGGTGTCGTAccc < 1:1800733/150‑1 (MQ=255) aaaTGGTTGCGGTACACGCGAATGGCCTCGTGCATGTAGCGTGGCGCGAAATGCGAGGCGAAGGCGTAGGGCATGCCGC‑GCATGCCCGCCAGCTGGGCACTGAATGGTCTGGATCCCAGCAACCACATCGGCACGTCGGTGTCGTAcccc > 1:1467206/1‑150 (MQ=255) aaaTGGTTGCGGTACACGCGAATGGCCTCGTGCATGTAGCGTGGCGCGAAATGCGAGGCGAAGGCGTAGGGCATGCCGC‑GCATGCCCGCCAGCTGGGCACTGAACAGGCTGGATCCCAGCAACCACATCGGCACGTCGGTGTCGTAcccc < 2:2097825/150‑1 (MQ=255) aaTGGTTGCGGTACACGCGAATGGCCTCGTGCATGTAGCGTGGCGCGAAATGCGAGGCGAAGGCGTAGGGCATGCCGC‑GCATGCCCGCCAGCTGGGCACTGAACAGGCTGGATCCCAGCAACCACATCGGCACGTCGGTGTCGTACCCCg < 1:1906619/150‑1 (MQ=255) aTGGTTGCGGTACACGCGAATGGCCTCGTGCATGTAGCGTGGCGCGAAATGCGAGGCGAAGGCGTAGGGCATGCGCG‑GCATGccctaa > 2:2132141/1‑85 (MQ=255) aTGGTTGCGGTACACGCGAATGGCCTCGTGCATGTAGCGTGGCGCGAAATGCGAGGCGAAGGCGTAGGGCATG‑CGCGGCATGccctac < 1:2132141/88‑4 (MQ=255) gTTGCGGTACACGCGAATGGCCTCGTGCATGTAGCGTGGCGCGAAATGCGAGGCGAAGGCGTAGGGCATGCCGC‑GCATGCCCGCCAGCTGGGCACTGAACAGGCTGGATCCCAGCAACCGCATCGGCACGt > 1:1235596/1‑131 (MQ=255) gTTGCGGTACACGCGAATGGCCTCGTGCATGTAGCGTGGCGCGAAATGCGAGGCGAAGGCGTAGGGCATGCCGC‑GCATGCCCGCCAGCTGGGCACTGAACAGGCTGGATCCCACCAACCGCATCGGCACGt < 2:1235596/131‑1 (MQ=255) gCGGTACACGCGAATGGCCTCGTGCATGTAGCGTGGCGCGAAATGCGAGGCGAAGGCGTAGGGCATGCCGC‑GCATGTCCGCCAGCTGGGCACTGAGCAGGCTGGATCCCAGCAACCACATCGGCACGTCGGTGTCGTACCCCGGTACGGc < 1:433387/150‑1 (MQ=255) ggTACACGCGAATGGCTTCGTGCATGTAGCGTGGAGTGAATTGCGAGGCGAAAGCGTACGGCATGCCGC‑GCATGCCCGCCAGCTGGGCACTGAACAGGCTGGATTCCACCAACCCAATCCATACGTCGGTGTTTTATACCGGTACGGCGa < 2:760032/150‑1 (MQ=255) ggTACACGCGAATGGCCTCGTGCATGTAGCGTGGCGCGAAATGCGAGGCGAAGGCGTAGGGCATGCCGC‑GCATGCCCGCCAGCTGGGCACTGCTAAGGCGGTATCCCAGCAACCACATCGGCACGTCGGTGTCGTACCCCGGTACGGCGa < 2:1791134/150‑1 (MQ=255) gTACACGCGAATGGCCTCGTGCATGTAGCGTGGCGCGAAATGCGAGGCGACCGCGTAGGGCATGCCGC‑GCAt > 1:1978784/1‑72 (MQ=255) gTACACGCGAATGGCCTCGTGCATGTAGCGTGGCGCGAAATGCGAGGCGAAGGCGTAGGGCATGCCGC‑GCAt < 2:1978784/72‑1 (MQ=255) acGCGAATGGCCTCGTGCATGTAGCGTGGCGCGAGATGCGAGGCGAAGGCGTAGGGCATGCCGC‑GCATGCCCGCCAGCTGGGCACTGAACAGGCTGGATCCCAGCAACCACATCGGCACGTCGGTGTCGTACCCCGGTACGGCGATCACt > 2:578005/1‑150 (MQ=255) acGCGAATGGCCTCGTGCATGTAGCGTGGCGCGAAATGCGAGGCGAAGGCGTAGGGCATGCCGC‑GCATGCCCGCCAGCTGGGCACTGAACAGGCTGGATCCCAGCAACCACATCGGCACGTCGgt < 1:1163954/125‑1 (MQ=255) acGCGAATGGCCTCGTGCATGTAGCGTGGCGCGAAATGCGAGGCGAAGGCGTAGGGCATGCCGC‑GCATGCCCGCCAGCTGGGCACTGAACAGGCTGGATCCCAGCAACCACATCGGCACGTCGgt > 2:1163954/1‑125 (MQ=255) gcgAATGGCCTCGTGCATGTAGCGTGGCGCGAAATGCGAGGCGAAGGCGTAGGGCATGCCGC‑GCATGCCCGCCAGCTGGGCACTGAACAGGCTGGATCCCAGCAACCACATCGGCACGTCGGTGTCGTACCCCGGTACGGCGATCACttt > 2:1804826/1‑150 (MQ=255) gAATGGCCTCGTGCATGTAGCGTGGCGCGAAATGCGAGGCGAAGGCGTAGGGCATGCCGC‑GCATGCCCGCCAGCTGGGCACTGAACAGGCTGGATCCCAGCAACCACATCGGCACGTCGGTGTCGTACCCCGGTACGGCGATCACttttt < 2:112928/150‑1 (MQ=255) tGGCCTCGTGCATGTAGCGTGGCGCGAAATGCGAGGCGAAGGCGTAGGGCATGCCGC‑GCATGCCCGCCAGCTGGGCACTGAACAGGCTGGATCCCAGCAACCACATCGGCACGTCGGTGTCGTACCCCGGTACGGCGATCACTTTTTGat < 2:1034044/150‑1 (MQ=255) cTCGTGCATGTAGCGTGGCGCGAAATGCGAGGCGAAGGCGTAGGGCATGCCGC‑GCATGCCCGCCAGCTGGGCACTGAACAGGCTGGATCCCAGCAACCACATCGGCACGTCGGTGTCGTACCCCGGTACGGCGATCACTTTTTGatcatc > 2:1621225/1‑150 (MQ=255) tCGTGCATGTAGCGTGGCGCGAAATGCGAGGCGAAGGCGTAGGGCATGCCGC‑GCATGCCCGCCAGCTGGGCACTGAACAGGCTGGATCCCAGCAACCACATCGGCACGTCGGTGTCGTACCCCGGTACGGCGATCACTTTTTGAtcatca > 1:453456/1‑150 (MQ=255) cGTGCATGTAGCGTGGCGCGAAATGCGAGGCGAAGGCGTAGGGCATGCCGC‑GCATGCCCGCCAGCTGGGCACTGAACAGGCTGGATCCCAGCAACCACATCGGCACGTCGGTGTCGTACCCCGGTACGGCGATCACTTTTTGATCATCAg > 2:1303483/1‑150 (MQ=255) gCATGTAGCGTGGCGCGAAATGCGAGGCGAAGGCGTAGTGCATGCCGC‑GCATGCCCGCCAGCTGGGCACTGAACAGGCTGGATCCCAGCAACCACATCGGCACGTCGGTGTCGTACCCCGGTACGGCGATCACTTTTTGATCATCAGTGc < 1:2038592/150‑1 (MQ=255) gCGTGGCGCGAAATGCGAGGCGAAGGCGTAGGGCATGCCGC‑GCATGCCCGCCAGCTGGGCACTGAACAGGCTGGATCCCAGCAACCACATCGGCACGTCGGTGTCGTACCCCGGTACGGCGATCACTTTTTGATCATCAGTGCGTGGccc > 1:893266/1‑150 (MQ=255) gtcgcgcGAAATGCGAGGCGAAGGCGTAGGGCATGCCGC‑GCATGCCCGCCAGCTGGGCACTGAACAGGCTGGATCCCAGCAACCACATCGGCACGTCGGTGTCGTACCCCGGTACGGCGATCACTTTTTGATCATCAGTGCGTGGCCCGa > 1:2400394/4‑150 (MQ=255) tGGCGCGAAATGCGAGGCGAAGGCGTAGGGCATGCCGC‑GCATGCCCGCCAGCTGGGCACTGAACAGGCTGGATCCCAGCAACCACATCGGCACGTCGGTGTCGTACCCCGGTACGGCGATCACTTTTTGATCATCAGTGCGTGGCCCGAg < 2:1570289/150‑1 (MQ=255) cgcgAAATGCGAGGCGAAGGCGTAGGGCATGCCGC‑GCATGCCCGCCAGCTGGGCACTGAACAGGCTGGATCCCAGCAACCACATCGGCACGTCGGTGTCGTACCCCGGTACGGCGATCACTTTTTGATCATCAGTGCGTGGCCCGAGGTa > 2:1578089/1‑150 (MQ=255) cgcgAAATGCGAGGCGAAGGCGTAGGGCATGCCGC‑GCATGCCCGCCAGCTGGGCACTGAACAGGCTGGATCCCAGCAACCACATCGGCACGTCGGTGTCGTACCCCGGTACGGCGATCACTTTTTGATCATCAGTGCGTGGCCCGAGGTa > 2:1576715/1‑150 (MQ=255) cgcgAAATGCGAGGCGAAGGCGTAGGGCATGCCGC‑GCATGCCCGCCAGCTGGGCACTGAACAGGCTGGATCCCAGCAACCACATCGGCACGTCGGTGTCGTACCCCGGTACGGCGATCACTTTTTGATCATCAGTGCGTGGCCCGAGGTa > 1:279765/1‑150 (MQ=255) gcgAAATGCGAGGCGAAGGCGTAGGGCATGCCGC‑GCATGCCCGCCAGCTGGGCACTGAACAGGCTGGATCCCAGCCAc < 1:2405748/78‑1 (MQ=255) gcgAAATGCGAGGCGAAGGCGTAGGGCATGCCGC‑GCATGCCCGCCAGCTGGGCACTGAACAGGCTGGATCCCAGCAAc > 2:2405748/1‑78 (MQ=255) aaaTGCGAGGCGAAGGCGTAGGGCATGCCGC‑GCATGCCCGCCAGCTGGGCACTGAACAGGCTGGATCCCAGCAACCACATCGGCACGTCGGTGTCGTACCCCGGTACGGCGATCACTTTTTGATCATCAGTGCGTGGCCCGAGGTAgcgc > 2:1264967/1‑150 (MQ=255) gAGGCGAAGGCGTAGGGCATGCCGC‑GCATGCCCGCCAGCTGGGCACTGAACAGGCTGGATCCCAGCAACCACATCGGCACGTCGGTGTCGTACCCCGGTACGGCGATCACTTTTTGATCATCAGTGCGTg < 1:1094420/130‑1 (MQ=255) gAGGCGAAGGCGTAGGGCATGCCGC‑GCATGCCCGCCAGCTGGGCACTGAACAGGCTGGATCCCAGCAACCACATCGGCACGTCGGTGTCGTACCCCGGTACGGCGATCACTTTTTGATCATCAGTGCGTg > 2:1094420/1‑130 (MQ=255) gAGGCGAAGGCGTAGGGCATGCCGC‑GCATGCCCGCCAGCTGGGCACTGAACAGGCTGGATCCCAGCAACCACATCGGCACGTCGGTGTCGTACCCCGGTACGGCGATCACTTTTTGATCATCAGTGCGTGGCCCGAGGTAGCGCGAAAGc > 1:168236/1‑150 (MQ=255) gAGGCGAAGGCGTAGGGCATGCCGC‑GCATGCCCGCCAGCTGGGCACTGAACAGGCTGGATCCCAGCAACCACATCGGCACGTCGGTGTCGTACCCCGGTACGGCGATAAGATTGGGATCATCAGTGCGTGGCCCGAGGTAGCGCGAAAGc > 1:24155/1‑150 (MQ=255) aGGCGAAGGCGTAGGGCATGCCGC‑GCATGCCCGCCAGCTGGGCACTGAACAGGCTGGATCCCAGCAACCACATCGGCACGTCGGTGTCGTACCCCGGTACGGCGATCACTTTTTGATCATCAGTGCGTGGCCCGAGGTAGCGCGAAAGct > 1:1627549/1‑150 (MQ=255) gAAGGCGTAGGGCATGCCGC‑GCATGCCCGCCAGCTTGGCACTGAACAGGCTGGATCCCAGCAACCACATCGGCACGTCGGTGTCGTACCCCGGTACGGCGATCACTTTTTGATCATCAGTGCGTGGCCCGAGGTAgcgc < 2:315280/139‑1 (MQ=255) gAAGGCGTAGGGCATGCCGC‑GCATGCCCGCCAGCTGGGCACTGAACAGGCTGGATCCCAGCAACCACATCGGCACGTCGGTGTCGTACCCCGGTACGGCGATCACTTTTTGATCATCAGTGCGTGGCCCGAGGTAgcgc > 1:315280/1‑139 (MQ=255) aaGGCGTAGGGCATGCCGC‑GCATGCCCGCCAGCTGGGCACTGAACAgg > 1:2332531/1‑48 (MQ=255) aaGGCGTAGGGCATGCCGC‑GCATGCCCGCCAGCTGGGCACTGAACAgg < 2:2332531/48‑1 (MQ=255) aaGGCGTAGGGCATGCCGC‑GCATGCCCGCCAGCTGGGCACTGAACAGGCTGGATCCCAGCAACCACATCGGCACGTCGGTGTCGTACCCCGGTACGGCGATCACTTTTTGATCATCAGTGCGTGGCCCGAGGTAGCGCGAAAGCTCCTCg > 1:911449/1‑150 (MQ=255) ggCGTAGGGCATGCCGC‑GCATGCCCGCCAGCTGGGCACTGAACAGGCTGGATCCCAGCAACCACATCGGCACGTCGGTGTCGTACCCCGGTACGGCGATCACttt > 2:2226939/1‑105 (MQ=255) gTAGGGCATGCCGC‑GCATGCCCGCCAGCTGGGCACTGAACAGGCTGGATCCCAGCAACCACATCGGCACGTCGGTGTGGAACCCCGGTACGTCGATCACTTTTTGATCATCAGTGCGTGGCCCGAGGTAGCGCGAAAGCTCCTCGACATc > 1:898477/1‑150 (MQ=255) gggCATGCGCG‑GCATGCCCGCCAGCTGGGCACTGAACAGGCTGGATCACAGCAACCACATCGGCACGTCGGTGTCGTACCCCGGTACGGCGATCACttt > 1:62211/1‑99 (MQ=255) gggCATG‑CGCGGCATGCCCGCCAGCTGGGCACTGAACAGGCTGGATCCCAGCAACCACATCGGCACGTCGGTGTCGTACCCCGGTACGGCGATCACttt < 2:62211/99‑1 (MQ=255) gggCATG‑CGCGGCATGCCCGCCAGCTGGGCACTGAACAGGCTGGATCCCAGCAACCACATCGGCACGTCGGTGTCGTACCCCGGTACGGCGATCACTTTTTGATCATCAGTGCGTGGCCCGAGGTAGCGCGaa > 2:1690093/1‑133 (MQ=255) gggCATG‑CGCGGCATGCCCGCCAGCTGGGCACTGAACAGGCTGGATCCCAGCAACCACATCGGCACGTCGGTGTCGTACCCCGGTACGGCGATCACTTTTTGATCATCAGTGCGTGGCCCGAGGTAGCGCGaa < 1:1690093/133‑1 (MQ=255) gggCATG‑CGCGGCATGCCCGCCAGCTGGGCACTGAACAGGCTGGATCCCAGCAAAAACATAGGCACGTCGGTGTCGTACCCCGGTACGGCGATCACTTTTTGATCATCAGTGCGTGGCCCGAGGTAGCGCGAAAGCTCCTCGACATCGTc > 2:1190508/1‑150 (MQ=255) ggCATGCCGC‑GCATGCCCGCCAGCTGGGCACTGAACAGGCTGGATCCCAGCAACCACATCGGCACGTCGGTGTCGTACCCCGGTACGGCGATCACTTTTTGATCATCAGTGc < 2:1441233/112‑1 (MQ=255) ggCATGCCGC‑GCATGCCCGCCAGCTGGGCACTGAACAGGCTGGATCCCAGCAACCACATCGGCACGTCGGTGTCGTACCCCGGTACGGCGATCACTTTTTGATCATCAGTGc > 1:1441233/1‑112 (MQ=255) gCATGCCGG‑TCTTGTCCGCCTGCTGGGCACTGAACAGGCTGGATCCCAGCAACCACATCGGCATGTCGGTGTCGTACCCCGGTACGGCGATCACTTTTTGATCATCAGTGTGTGGCCCGAGGTAGCGCGAATGCTCCTCGACATCGTCTg < 2:1893408/150‑1 (MQ=255) cATGCCGC‑GCATGCCCGCCAGCTGGGCACTGAACAGGCTGGATCCCAGCAACCACCTCGGCACGTCGGTGTCGTACCCCGGTACgg < 1:65903/86‑1 (MQ=255) cATGCCGC‑GCATGCCCGCCAGCTGGGCACTGAACAGGCTGGATCCCAGCAACCACATCGGCACGTCGGTGTCGTACCCCGGTACgg > 2:65903/1‑86 (MQ=255) tGCCGC‑GCATGCCCGCCAGCTGGGCACTGAACAGGCTGGATCCCAGCAACCACATCGGCACGTCGGTGTCGTACCCCGGTACGGCGATCACTTTTTGATCATCAGTGCGTGGCCCGAGGTAGCGCGAAAGCTCCTCGACATCGTCTGGGa < 2:911449/150‑1 (MQ=255) gCCGC‑GCATGCCCGCCAGCTGGGCACTGAACAGGCTGGATCCCAGCAACCACATCGGCACGTCGGTGTCGTACCCCGGTACGGCGATCACTTTTTGATCATCAGTGCGTGGCCCGAGGTAGCGCGAAAGCTCCTCGACATCGTCTGGGaa < 1:1264967/150‑1 (MQ=255) | TCTCGTCGGTCTGCGCCACCACCATGGGAATGCCCAGCATCACATACGGCTTGTCCAGCGTGGTCGAGGGCTTGAAATGGTTGCGGTACACGCGAATGGCCTCGTGCATGTAGCGTGGCGCGAAATGCGAGGCGAAGGCGTAGGGCATGCCGC‑GCATGCCCGCCAGCTGGGCACTGAACAGGCTGGATCCCAGCAACCACATCGGCACGTCGGTGTCGTACCCCGGTACGGCGATCACTTTTTGATCATCAGTGCGTGGCCCGAGGTAGCGCGAAAGCTCCTCGACATCGTCTGGGAA > NC_002947/95982‑96279 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |