| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 980,649 | Δ1 bp | 5.1% | coding (88/522 nt) | hscB → | DnaJ‑like molecular chaperone |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 980,649 | 0 | C | . | 5.1% | 314.9 / 10.2 | 98 | coding (88/522 nt) | hscB | DnaJ‑like molecular chaperone |
| Reads supporting (aligned to +/- strand): ref base C (57/36); new base . (3/2); total (60/38) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.28e-01 | |||||||||||
ACAACCCCAACGTGCGCGGTGAGTGTGGCTGCGGCGAAAGCTTCAACGTTTGAGGCTGGCTGTGGGTACTCCTTGTCATTACGCATTGTTTGACCTCCAGCCAAGCTTCCGTCTGGATCTCGACAAGCTGGCCA‑CTCGCTATCGCGAGCTGGCCCGCGAAGTCCATCCTGATCGCTTTGCCGACGCCTCCGAGCGTGAGCAGCGTATTGCGCTGGAAAAATCCGCGGCCCTCAACGACGCTTACCAGACGCTGCGCAGTGCGCCGCGTCGCGCGCGCTACCTGCTGGCCATCAGCGGC > NC_002947/980501‑980798 | acaacCCCAACGTGCGCGGTGAGTGTGGCTGCGGCGAAAGCTTCAACGTTTGAGGCTGGCTGTGGGTACTCCTTGTCATTACGCATTGTTTGACCTCCAGCCAAGCTTCCGTCTGGATCTCGACAAGCTGGCCA‑CTCGCTATCGCGAGCt > 2:1898919/1‑150 (MQ=255) caacCCCAACGTGCGCGGTGAGTGTGGCTGCGGCGAAAGCTTCAACGTTTGAGGCTGGCTGTGGGTACTCCTTGTCATTACGCATTGTTTGACCTCCAGCCAAGCTTCCGTCTGGATCTCGACAAGCTGGCCA‑CTCGCTATCGCGAGCTg < 1:774360/150‑1 (MQ=255) caacCCCAACGTGCGCGGTGAGTGTGGCTGCGGCGAAAGCTTCAACGTTTGAGGCTGGCTGTGGGTACTCCTTGTCATTACGCATTGTTTGACCTCCAGCCAAGCTTCCGTCTGGATCTCGACAAGCTGGCCA‑CTCGCTATCGCGAGCTg < 1:206622/150‑1 (MQ=255) caacCCCAACGTGCGCGGTGAGTGTGGCTGCGGCGAAAGCTTCAACGTTTGAGGCTGGCTGTGGGTACTCCTTGTCATTACGCATTGTTTGACCTCCAGCCAAGCTTCCGTCTGGATCTCGACAAGCTGGCCA‑CTCGCTATCGCGAGCTg < 1:1838287/150‑1 (MQ=255) aacCCCAACGTGCGCGGTGAGTGTGGCTGCGGCGAAAGCTTCAACGTTTGAGGCTGGCTGTGGGTACTCCTTGTCATTACGCATTGTTTGACCTCCAGCCAAGCTTCCGTCTGGATCTCGACAAGCTGGCCA‑CTCGCTATCGCGAGCTgg > 1:2228759/1‑150 (MQ=255) aacCCCAACGTGCGCGGTGAGTGTGGCTGCGGCGAAAGCTTCAACGTTTGAGGCTGGCTGTGGGTACTCCTTGCCATTACGCATTGTTTGACCTCCAGCCAAGCTTCCGTCTGGATCTCGACAAGCTGGCCA‑CTCGCTATCGCGAGCTgg > 2:580610/1‑150 (MQ=255) cccAACGTGCGCGGTGAGTGTGGCTGCGGCGAAAGCTTCAACGTTTGAGGCTGGCTGTGGGTACTCCTTGTCATTACGCATTGTTTGACCTCCAGCCAAGCTTCCGTCTGGATCTCGACAAGCTGGCCA‑CTCGCTATCGCGAGCTGGccc > 2:969938/1‑150 (MQ=255) ccAACGTGCGCGGTGAGTGTGGCTGCGGCGAAAGCTTCAACGTTTGAGGCTGGCTGTGGGTACTCCTTGTCATTACGCATTGTTTGACCTCCAGCCAAGATTCCGTCTGGATCTCGACAAGCTGGCCA‑CTCGCTATCGCGAGCTGGCCcg > 1:759376/1‑150 (MQ=255) gTGCGCGGTGAGTGTGGCTGCGGCGAAAGCTTCAACGTTTGAGGCTGGCTGTGGGTACTCCTTGTCATTACGCATTGTTTGACCTCCAGCCAAGCTTCCGTCTGGATCTCGACAAGCTGGCCA‑CTCGCTATCGCGAGCTGGCCCGCGAAg < 2:759376/150‑1 (MQ=255) gTGCGCGGTGAGTGTGGCTGCGGCGAAAGCTTCAACGTTTGAGGCTGGCTGTGGGTACTCCTTGTCATTACGCATTGTTTGACCTCCAGCCAAGCTTCCGTCTGGATCTCGACAAGCGGGCCACCTCGCGATAGCGAG‑TGGccagcttgt < 1:1271008/150‑8 (MQ=255) ggTGAGTGTGGCTGCGGCGAAAGCTTCAACGTTTGAGGCTGGCTGTGGGTACTCCTTGTCATTACGCATTGTTTGACCTCCAGCCAAGCTTCCGTCTGGATCTCGACAAGCTGGCCA‑CTCGCTATCGCGAGCTGGCCCGCGAAGTCCATc < 1:1734233/150‑1 (MQ=255) ggCTGCGGCGAAAGCTTCAACGTTTGAGGCTGGCTGTGGGTACTCCTTGTCATTACGCATTGTTTGACCTCCAGCCAAGCTTCCGTCTGGATCTCGACAAGCCGGCCA‑CTCGCTATCGCGTTCTAGCCCGCGAAGTCCATCCTGATCGCt < 1:1271136/150‑1 (MQ=255) cTGCGGCGAAAGCTTCAACGTTTGAGGCTGGCTGTGGGTACTCCTTGTCATTACGCATTGTTTGACCTCCAGCCAAGCTTCCGTCTGGATCTCGACAAGCTGGCCA‑CTCGCTATCGCGAGCTGGCCCGCGAAGTCCATCCTGATCGCttt < 2:2187355/150‑1 (MQ=255) cTGCGGCGAAAGCTTCAACGTTTGAGGCTGGCTGTGGGTACTCCTTGTCATTACGCATTGTTTGACCTCCAGCCAAGCTTCCGTCTGGATCTCGACAAGCTGGCCA‑CTCGCTATCGCGAGCTGGCCCGCGAAGTCCATCCTGATCGCttt < 2:1937290/150‑1 (MQ=255) cTGCGGCGAAAGCTTCAACGTTTGAGGCTGGCTGTGGGTACTCCTTGTCATTACGCATTGTTTGACCTCCAGCCAAGCTTCCGTCTGGATCTCGACAAGCTGGCCA‑CTCGCTATCGCGAGCTGGCCCGCGAAGTCCATCCTGATCGCttt < 2:2228759/150‑1 (MQ=255) cggcgAAAGCTTCAACGTTTGAGGCTGGCTGTGGGTACTCCTTGCCATTACGCATTGTTTGACCTCCAGCCAAGCTTCCGTCTGGATCTCGACAAGCTGGCCA‑CTCGCTATCGCGAGCTGGCCCGCGAAGTCCATCCTGATCGCTTTGcc < 1:580610/150‑1 (MQ=255) cgAAAGCTTCAACGTTTGAGGCTGGCTGTGGGTACTCCTTGTCATTACGCATTGTTTGACCTCCAGCCAAGCTTCCGTCTGGATCTCGACAAGCTGGCCA‑CTCGCTATCGCGAGCTGGCCCGCGAAGTCCATCCTGATCGCTTTGCCGAc > 2:1948082/1‑150 (MQ=255) aaaGCTTCAACGTTTGAGGCTGGCTGTGGGTACTCCTTGTCATTACGCATTGTTTGACCTCCAGCCAAGCTTCCGTCTGGATCTCGACAAGCTGGCCA‑CTCGCTATCGCGAGCTGGCCCGCGAAGTCCATCCTGATCGCTTTGCCGACGc > 1:74831/1‑150 (MQ=255) ttCAACGTTTGAGGCTGGCTGTGGGTACTCCTTGTCATTACGCATTGTTTGACCTCCAGCCAAGCTTCCGTCTGGATCTCGACAAGCTGGCCA‑CTCGCTATCGCGAGCTGGCCCGCGaa > 1:48464/1‑119 (MQ=255) ttCAACGTTTGAGGCTGGCTGTGGGTACTCCTTGTCATTACGCATTGTTTGACCTCCAGCCAAGCTTCCGTCTGGATCTCGACAAGCTGGCCA‑CTCGCTATCGCGAGCTGGCCCGCGaa < 2:48464/119‑1 (MQ=255) ttCAACGTTTGAGGCTGGCTGTGGGTACTCCTTGTCATTACGCATTGTTTGACCTCCAGCCAAGCTTCCGTCTGGATCTCGACAAGCTGGCCA‑CTCGCTATCGCGAGCTGGCCCGCGAAGTCCATCCTGATCGCTTTGCCGACGCCTCCg > 2:856522/1‑150 (MQ=255) aaCGTTTGAGGCTGGCTGTGGGTACTCCTTGTCATTACGCATTGTTTGACCTCCAGCCAAGCTTCCGTCTGGATCTCGACAAGCTGGCCA‑CTCGCTATCGCGAGCTGGCCCGCGAAGTCCATCCTGATCGCTTTGCCGACGCCTCCGAGc > 2:1254474/1‑150 (MQ=255) cGTTTGAGGCTGGCTGTGGGTACTCCTTGTCATTACGCATTGTTTGACCTCCAGCCAAGCTTCCGTCTGGATCTCGACAAGCTGGCCA‑CTCGCTATCGCGAGCTGGCCCGCGAAGTCCATCCTGATCGCTTTGCCGACGCCTCCGAGCGt < 1:856522/150‑1 (MQ=255) gTTTGAGGCTGGCTGTGGGTACACCTAGTCATTAAGCATTGTTTGACCTCCAGCCAAGCTGCCGTCTGGATCTCGACAAGCTGGCCA‑CTCGCTATCGCGAGCTGGCCCGCGAAGTCCATCCTGATCGCTTTGCCGACGCCTCCGAGCGTg > 2:637249/1‑150 (MQ=255) gctggctgTGGGTACTCCTTGTCATTACGCATTGTTTGACCTCCAGCCAAGCTTCCGGCTGGATCTCGACAAGCTGGCCA‑CTCGCTATCGCGAGCTGGCCCGCGAAGTCCATCCTGATCGCTTTGCCGACGCCTCCCAGCGTGAGCAGCg > 1:299259/1‑150 (MQ=255) gctgTGGGTACTCCTTGTCATTACGCATTGTTTGACCTCCAGCCAAGCTTCCGTCTGGATCTCGACAAGCTGGCCA‑CTCGCTATCGCGAGCTGGCCCGCGAAGTCCATCCTGATCGCTTTGCCGACGCCTCCGAGCGTGAGCAGCGTAtt > 2:1432355/1‑150 (MQ=255) aCTCCTTGTCATTACGCATTGTTTGACCTCCAGCCAAGCTTCCGTCTGGATCTCGACAAGCTGGCCA‑CTCGCTATCGCGAGCTGGCCCGCGAAGTCCATCCTGATCGCTTTGCCGACGCCTCCGAGCGTGAGCAGCGTATTGCGCTGGaa > 1:1417466/1‑150 (MQ=255) cTCCTTGTCATTACGCATTGTTTGACCTCCAGCCAAGCTTCCGTCTGGATCTCGACAAGCTGGCCA‑CTCGCTATCGCGAGCTGGCCCGCGAAGTCCATCCTGATCGCTTTGCCGACGCCTCCGAGCGTGAGCAGCGTATTGCGCTGGaaa > 1:670706/1‑150 (MQ=255) tCCTTGTCATTACGCATTGTTTGACCTCCAGCCAAGCTTCCGTCTGGATCTCGACAAGCTGGCCA‑CTCGCTATCGCGAGCTGGCCCGCGAAGTCCATCCTGATCGCTTTGCCGAc < 2:777425/115‑1 (MQ=255) tCCTTGTCATTACGCATTGTTTGACCTCCAGCCAAGCTTCCGTCTGGATCTCGACAAGCTGGCCA‑CTCGCTATCGCGAGCTGGCCCGCGAAGTCCATCCTGATCGCTTTGCCGAc > 1:777425/1‑115 (MQ=255) tCCTTGTCATTACGCATTGTTTGACCTCCAGCCAAGCTTCCGTCTGGATCTCGACAAGCTGGCCA‑CTCGCTATCGCGAGCTGGCCCGCGAAGTCCATCCTGATCGCTTTGCCGACGCCTCCGAGCGTGAGCAGCGTATTGCGCTGGaaaa > 1:845452/1‑150 (MQ=255) tCCTTGTCATTACGCATTGTTTGACCTCCAGCCAAGCTTCCGTCTGGATCTCGACAAGCTGGCCA‑CTCGCTATCGCGAGCTGGCCCGCGAAGTCCATCCTGATCGCTTTGCCGACGCCTCCGAGCGTGAGCAGCGTATTGCGCTGGaaaa > 2:2222130/1‑150 (MQ=255) tCCTTGTCATTACGCATTGTTTGACCTCCAGCCAAGCTTCCGTCTGGATCTCGACAAGCTGGCCA‑CTCGCTATCGCGAGCTGGCCCGCGAAGTCCATCCTGATCGCTTTGCCGACGCCTCCGAGCGTGAGCAGCGTATTGCGCTGGaaaa > 1:2273575/1‑150 (MQ=255) cTTGTCATTACGCATTGTTTGACCTCCAGCCAAGCTTCCGTCTGGATCTCGACAAGCTGGCCA‑CTCGCTATCGCGAGCTGGCCCGCGaa > 1:1581230/1‑89 (MQ=255) cTTGTCATTACGCATTGTTTGACCTCCAGCCAAGCTTCCGTCTGGATCTCGACAAGCTGGCCA‑CTCGCTATCGCGAGCTGGCCCGCGaa < 2:1581230/89‑1 (MQ=255) cTTGTCATTACGCATTGTTTGACCTCCAGCCAAGCTTCCGTCTGGATCTCGACAAGCTGGCCA‑CTCGCTATCGCGAGCTGGCCCGCGAAGTCCATCCTGATCGCTTTGCCGACGCCTCCGAGCGTGAGCAGCGTATTGCGCTGGAAAAAt > 2:857377/1‑150 (MQ=255) ttGTCATTACGCATTGTTTGACCTCCAGCCAAGCTTCCGTCTGGATCTCGACAAGCTGGCCA‑CTCGCTATCGCGAGCTGGCCCGCGAAGTCCATCCTGATCGCTTTGCCGACGCCTCCGAGCGTGAGCAGCGTATTGCGCTGGa > 1:1592558/1‑144 (MQ=255) ttGTCATTACGCATTGTTTGACCTCCAGCCAAGCTTCCGTCTGGATCTCGACAAGCTGGCCA‑CTCGCTATCGCGAGCTGGCCCGCGAAGTCCATCCTGATCGCTTTGCCGACGCCTCCGAGCGTGAGCAGCGTATTGCGCTGGa < 2:1592558/144‑1 (MQ=255) ttGTCATTACGCATTGTTTGACCTCCAGCCAAGCTTCCGTCTGGATCTCGACAAGCTGGCCA‑CTCGCTATCGCGAGCTGGCCCGCGAAGTCCATCCTGATCGCTTTGCCGACGCCTCCGAGCGTGAGCAGCGTATTGCGCTGGAAAAATc > 2:1294603/1‑150 (MQ=255) aTTACGCATTGTTTGACCTCCAGCCAAGCTTCCGTCTGGATCTCGACAAGCTGGCCA‑CTCGCTATCGCGAGCTGGCCCGCGAAGTCCATCCTGATCGCTTTGCCGACGCCTCCGAGCGTGAGCAGCGTATTGCGCTGGAAAAATACGCgg > 2:1248082/1‑150 (MQ=255) ttACGCATTGTTTGACCTCCAGCCAAGCTTCCGTCTGGATCTCGACAAGCTGGCCA‑CTCGCTATCGCGAGCTGGCCCGCGaa > 1:22894/1‑82 (MQ=255) ttACGCATTGTTTGACCTCCAGCCAAGCTTCCGTCTGGATCTCGACAAGCTGGCCA‑CTCGCTATCGCGAGCTGGCCCGCGaa < 2:22894/82‑1 (MQ=255) ttACGCATTGTTTGACCTCCAGCCAAGCTTCCGTCTGGATCTCGACAAGCTGGCCA‑CTCGCTATCGCGAGCTGGCCCGCGAAGCCCATCCTTATCGCTTTGCCGACGCCTCCGAGCGTGAGCAGCGTATTGCGCTGGAAAAATCCGCGGc > 2:686491/1‑150 (MQ=255) gCATTGTTTGACCTCCAGCCAAGCTTCCGTCTGGATCTCGACAAGCTGGCCA‑CTCGCTATCGCGAGCTGTTCCTCGAAGTCCATCCTGATCGCTTTGCCGACGCCTCCGAGCGTGAGCAGCGTATTGCGCTGGAAAAATCCTCGGCCCTc > 1:781009/1‑150 (MQ=255) gCATTGTTTGACCTCCAGCCAAGCTTCCGTCTGGATCTCGACAAGCTGGCCA‑CTCGCTATCGCGAGCTGGCCCGCGAAGTCCATCCTGATCGCTTTGCCGACGCCTCCGAGCGTGAGCAGCGTATTGCGCTGGAAAAATCCGCGGCCCTc > 2:1511560/1‑150 (MQ=255) gCATTGTTTGACCTCCAGCCAAGCTTCCGTCTGGATCTCGACAAGCTGGCCA‑CTCGCTATCGCGAGCTGGCCCGCGAAGTCCATCCTGATCGCTTTGCCGACGCCTCCGAGCGTGAGCAGCGTATTGCGCTGGAAAAATCCGCGGCCCTc > 1:1691802/1‑150 (MQ=255) tttGACCTCCAGCCAAGCTTCCGTCTGGATCTCGACAAGCTGGCCA‑CTCGCTATCGCGAGCTGGCCCGCGAAGTCCATcc > 2:39938/1‑80 (MQ=255) tttGACCTCCAGCCAAGCTTCCGTCTGGATCTCGACAAGCTGGCCA‑CTCGCTATCGCGAGCTGGCCCGCGAAGTCCATcc < 1:39938/80‑1 (MQ=255) tttGACCTCCAGCCAAGCTTCCGTCTGGATCTCGACAAGCTGGCCA‑CTCGCTATCGCGAGCTGGCCCGCGAAGTCCATCCTGATCGCTTTGCCGACGCCTCCGAGCGTGAGCAGCGTATTGCGCTGGAAAAATCAGCGGCCCTCAacgac > 2:1675118/1‑150 (MQ=255) tGACCTCCAGCGAAGCTTCCGTCTGGATCCCGACAAGCTGGCCA‑CTGGCTATCGCGAGCTGCCCCGCGAACTCCATCCTGATCGCTTTGCCGACGCCTCCGAGCGTGAGCAGCGTATTGCGCGGGAAAAATCCGCGGCCCTCAACGACGc < 2:923718/150‑1 (MQ=255) cTCCAGCCAAGCTTCCGTCTGGATCTCGACAAGCTGGCCA‑CTCGCTATCGCGAGCTGGCCCGCGAAGTCCATCCTGATCGCTTTGCCGACGCCTCCGAGCTTGAGCAGCGTATTGCGCTGGaaaaa > 1:934208/1‑126 (MQ=255) cTCCAGCCAAGCTTCCGTCTGGATCTCGACAAGCTGGCCA‑CTCGCTATCGCGAGCTGGCCCGCGAAGTCCATCCTGATCGCTTTGCCGACGCCTCCGAGCTTGAGCAGCGTATTGCGCTGGaaaaa < 2:934208/126‑1 (MQ=255) cTCCAGCCAAGCTTCCGTCTGGATCTCGACAAGCTGGCCA‑CTCGCTATCGCGAGCTGGCCCGCGAAGTCCATCCTGATCGCTTTGCCGACGCCTCCGAGCGTGAGCAGCGTATTGCGCTGGaaaa > 1:533398/1‑125 (MQ=255) cTCCAGCCAAGCTTCCGTCTGGATCTCGACAAGCTGGCCA‑CTCGCTATCGCGAGCTGGCCCGCGAAGTCCATCCTGATCGCTTTGCCGACGCCTCCGAGCGTGAGCAGCGTATTGCGCTGGaaaa < 2:533398/125‑1 (MQ=255) cTCCAGCCAAGCTTCCGTCTGGATCTCGACAAGCTGGCCA‑CTCGCTATCGCGAGCTGGCCCGCGAAGTCCATCCTGATCGCTTTGCCGACGCCTCCGAGCGTGAGCAGCGTATTGCGCTGGAAAAATCCGCGGCCCTCAACGACGCTTAc > 2:8310/1‑150 (MQ=255) cTCCAGCCAAGCTTCCGTCTGGATCTCGACAAGCTGGCCA‑CTCGCTATCGCGAGCTGGCCCGCGAAGTCCATCCTGATCGCTTTGCCGACGCCTCCGAGCGTGAGCAGCGTATTGCGCTGGAAAAATCCGCGGCCCTCAACGACGCTTAc > 1:1746069/1‑150 (MQ=255) tCCAGCCAAGCTTCCGTCTGGATCTCGACAAGCTGGCCA‑CTCGCTATCGCGAGCTGGCCCGCGAAGTCCATCCTGATCGCTTTGCCGACGGCTCCGAGCGTGAGCAGCGTATTGCGCTGGAAAAATCCGCGGCCCTCAACGACGCTTAcc < 2:839764/150‑1 (MQ=255) ccAAGCTTCCGTCTGGATCTCGACAAGCTGGCCA‑CTCGCTATCGCGAGCTGGCCCGCGAAGTCCATCCTGATCGCTTTGCCGACGCCTCCGAGCGTGAGCAGCGTATTGCGCTGGAAAAATCCGCGGCCCTCAACGACGCTTACCAGACg > 1:340144/1‑150 (MQ=255) cAAGCTTCCGTCTGGATCTCGACAAGCTGGCCA‑CTCGCTATCGCGAGCTGGCCCGCGAAGTCCATCCTGATCGCttt < 1:1282508/77‑1 (MQ=255) cAAGCTTCCGTCTGGATCTCGACAAGCTGGCCA‑CTCGCTATCGCGAGCTGGCCCGCGAAGTCCATCCTGATCGCttt > 2:1282508/1‑77 (MQ=255) ttCCGTCTGGATCTCGACAAGCTGGCCA‑CTCGCTATCGCGAGCTGGCCCGCGAAGTCCATCCTGATCGCTTTGCCGACGCCTCCGAGCGTGAGCAGCGTATTGCGCTGGAAAAATCCGCGGCCCTCAACGACGCTTACCAGACGCTgcgc > 1:403859/1‑150 (MQ=255) cGTCTGGATCTCGACAAGCTGGCCA‑CTCGCTATCGCGAGCTGGCCCGCGAAGTCCATCCTGATCGCTTTGCCGACGCCTCCGAGCGTGAGCAGCGTATTGCGCTGGAAAAATCCGCGGCCCTCAACGACGCTTACCAGACGCTGCGCAGt > 1:1164376/1‑150 (MQ=255) tCTGGATCTCGACAAGCTGGCCA‑CTCGCTATCGCGAGCTGGCCCGCGAAGTCCATCCTGATCGCTTTGCCGACGCCTCCGAGCGTGAGCAGCGTATTGCGCTGGAAAAATCCGCGGCCCTCAACGACGCTTACCAGACGCTGCGCACTgc > 1:2104654/1‑150 (MQ=255) tCTGGATCTCGACAAGCTGGCCA‑CTCGCTATCGCGAGCCGGCCCGCGAAGTCCATCCTGATCGCTTTGCCGACGCCTCCGAGCGTGAGCAGCGTATTGCGCTGGAAAAATCCGCGGCCCTCAACGACGCTTACCAGACGCTGCGCAGTgc > 2:497496/1‑150 (MQ=255) tcGACAAGCTGGCCA‑CTCGCTATCGCGAGCTGGCCCGCGAAGTCCATCCTGATCGCTTTGCCGACGCCTCCGAGCGTGAGCAGCGTATTGCGCTGGAAAAATCCGCGGCCCTCAACGACGCTTACCAGACGCTGCGCACTGCGCAGCGTc < 2:2104654/150‑1 (MQ=255) gACAAGCTGGCCA‑CTCGCTATCGCGAGCTGGCCCGCGAAGTCCATCCTGATCGCTTTGCCGACGCCTCCGAGCGTGAGCAGCGTATTGCGCTGGAAAAATCCGCGGCCCTCATCGACGCTTACCAGACGCTGCGCAGTGCGCCGCGTcgc < 1:1948082/150‑1 (MQ=255) gACAAGCTGGCCA‑CTCGCTATCGCGAGCTGGCCCGCGAAGTCCATCCTGATCGCTTTGCCGACGCCTCCGAGCGTGAGCAGCGTATTGCGCTGGAAAAATCCGCGGCCCTCAACGACGCTTACCAGACGCTGCGCAGTGCGCCGCGTcgc > 2:1063643/1‑150 (MQ=255) gACAAGCTGGCCA‑CTCGCTATCGCGAGCCGGCCCGCGAAGTCCATCCTGATCGCTTTGCCGACGCCTCCGAGCGTGAGCAGCGTATTGCGCTGGAAAAATCCGCGGCCCTCAACGACGCTTACCAGACGCTGCGCAGTGCGCCGCGTctg < 1:497496/150‑3 (MQ=255) cAAGCTGGCCA‑CTCGCTATCGCGAGCTGGCCCGCGAAGTCCATCCTGATCGCTTTGCCGACGCCTCCGAGCGTGAGCAGCGTATTGCGCTGGAAAAATCCGCGGCCCTCAACGACGCTTACCAGACGCTGCGCAGTGCGCCGCGTcgcgc < 1:969938/150‑1 (MQ=255) aaGCTGGCCA‑CTCGCTATCGCGAGCTGGCCCGCGAAGTCCATCCTGATCGCTTTGCCGACGCCTCCGAGCGTGAGCAGCGTATTGCGCTGGAAAAATCCGCGGCCCTCAACGACGCTTACCAGACGCGGCGCACTGCGCAGCGTctggta < 1:637249/150‑6 (MQ=255) cTGGCCA‑CTCGCTATCGCGAGCTGGCCCGCGAAGTCCATCCTGATCGCTTTGCCGACGCCTCCGAGCGTGAGCAGCGTATTGCGCTGGAAAAATCCGCGGCCCTCAACGACGCTTACCAGACGCTGCGCAGTGCGCCGCGTCgcgcgcgc > 1:138087/1‑150 (MQ=255) gccagcTCGCGATAGCGAG‑TGGCCCGCGAAGTCCATCCTGATCGCTTTGCCGACGCCTCCGAGCGTGAGCAGCGTATTGCGCTGGAAAAATCCGCGGCCCTCAACGACGCTTACCAGACGCTGCGCAGTGCGCCGCGTc < 2:436154/134‑1 (MQ=255) gccagcTCGCGATAGCGAG‑TGGCCCGCGAAGTCCATCCTGATCGCTTTGCCGACGCCTCCGAGCGTGAGCAGCGTATTGCGCTGGAAAAATCCGCGGCCCTCAACGACGCTTACCAGACGCTGCGCAGTGCGCCGCGTc > 1:436154/6‑139 (MQ=255) gccagcTCGCGATAGCGAG‑TGGCCCGCGAAGTCCATCCTGATCGCTTTGCCGACGCCTCCGAGCGTGAGCAGCGTATTGCGCTGGAAAAATCCGCGGCCCTCAACGACGCTTACCAGACGCTGCGCAGTGCGCCGCGTCGCGCGCGCTAc > 1:222115/6‑150 (MQ=255) gCCA‑CTCGCTATCGCGAGCTGGCCCGCGAAGTCCATCCTGATCGCTTTGCCGACGCCTCCGAGCGTGAGCAGCGTATTGCGCTGGAAAAATCCGCGGCCCTCAACGACGCTTACCAGACGCTGCGCAGTGCGCCGCGTCGCGCGCGCTAc < 2:299259/150‑1 (MQ=255) gCCA‑CTCGCTATCGCGAGCTGGCCCGCGAAGTCCATCCTGATCGCTTTGCCGACGCCTCCGAGCGTGAGCAGCGTATTGCGCTGGAAAAATCCGCGGCCCTCAACGACGCTTACCAGACGCTGCGCAGTGCGCCGCGTCGCGCGCGCTAc > 2:1511527/1‑150 (MQ=255) ccA‑CTCGCTATCGCGAGCTGGCCCGCGAAGTCCATCCTGATCGCTTTGCCGACGCCTCCGAGCGTGAGCAGTGTATTGCGCTGGAAAAATCCGCGGCCCTCAACGACGCTTACCAGACGCTGCGCAGTGCGCCGCGTCGCGCGCGCTAcc > 2:915932/1‑150 (MQ=255) ccA‑CTCGCTATCGCGAGCTGGCCCGCGAAGTCCATCCTGATCGCTTTGCCGACGCCTCCGAGCGTGAGCAGCGTCTTGCGCTGGAAAAATCCGCGGCCCTCAACGACGCTTAc < 1:1630799/113‑1 (MQ=255) ccA‑CTCGCTATCGCGAGCTGGCCCGCGAAGTCCATCCTGATCGCTTTGCCGACGCCTCCGAGCGTGAGCAGCGTATTGCGCTGGAAAAATCCGCGGCCCTCAACGACGCTTAc > 2:1630799/1‑113 (MQ=255) cagcTCGCGATAGCGAGCTGGCCCGCGAAGTCCATCCTGATCGCTTTGCCGACGCCTCCGAGCGTGAGCAGCGTATTGCGCTGGAAAAATCCGCGGCCCTCAACGACGCTTACCAGACGCTGCGCAGTGCGCCGCGTCGCGCGCGCTAcc > 1:1933931/4‑150 (MQ=255) cagcTCGCGATAGCGAG‑TGGCCCGCGAAGTCCATCCTGATCGCTTTGCCGACGCCTCCGAGCGTGAGCAGCGTATTGCGCTGGAAAAATCCGCGGCCCTCAACGACGCTTACCAGACGCTGCGCAGTGCGCCGCGTCGCGCGCGCTACct > 2:1265426/4‑150 (MQ=255) cA‑CTCGCTATCGCGAGCTGGCCCGCGAAGTCCATCCTGATCGCTTTGCCGACGCCTCCGAGCGTGAGCAGCGTATTGCGCTGGAAAAATCCGCGGCCCTCAACGACGCTTAcc < 1:1683408/113‑1 (MQ=255) cA‑CTCGCTATCGCGAGCTGGCCCGCGAAGTCCATCCTGATCGCTTTGCCGACGCCTCCGAGCGTGAGCAGCGTATTGCGCTGGAAAAATCCGCGGCCCTCAACGACGCTTAcc > 2:1683408/1‑113 (MQ=255) cA‑CTCGCTATCGCGAGCTGGCCCGCGAAGTCCATCCTGATCGCTTTGCCGACGCCTCCGAGCGTGAGCAGCGTATTGCGCTGGAAAAATCCGCGGCCCTCAACGACGCTTACCAGACGCTGCGCAGTGCGCCGCGTCGCGCGCGCTACct > 1:2253847/1‑150 (MQ=255) cA‑CTCGCTATCGCGAGCTGGCCCGCGAAGTCCATCCTGATCGCTTTGCCGACGCCTCCGAGCGTGAGCAGCGTATTGCGCTGGAAAAATCCGCGGCCCTCAACGACGCTTACCAGACGCTGCGCAGTGCGCCGCGTCGCGCGCGCTACct > 1:2188884/1‑150 (MQ=255) cA‑CTCGCTATCGCGAGCTGGCCCGCGAAGTCCATCCTGATCGCTTTGCCGACGCCTCCGAGCGTGAGCAGCGTATTGCGCTGGAAAAATCCGCGGCCCTCAACGACGCTTACCAGACGCTGCGCAGTGCGCCGCGTCGCGCGCGCTACct > 2:1096815/1‑150 (MQ=255) cA‑CTCGCTATCGCGAGCTGGCCCGCGAAGTCCATCCTGATCGCTTTGCCGACGCCTCCGAGCGTGAGCAGCGTATTGCGCTGGAAAAATCCGCGGCCATCAACGACGCTTACCAGACGCTGCGCAGTGCGCCGCGTCGCGCGCGCTACct > 2:67026/1‑150 (MQ=255) agcTCGCGATAGCGAGCTGGCCCGCGAAGTCCATCCTGATCGCTTTGCCGACGCCTCCGAGCGTGAGCAGCGTATTGCGCTGGAAAAATCCGCAGCCCTCAACGACGCTTACCAGACGCTGCGCAGTGCGCCGCGTCGCGCGCGCTACct > 1:915816/3‑150 (MQ=255) a‑CTCGCTATCGCGAGCTGGCCCGCGAAGTCCATCCTGATCGCTTTGCCGACGCCTCCGAGCGTGAGCAGCGTATTGCGCTGGAAAAATCCGCGGCCCTCAACGACGCTTACCAGACGCTGCGCAGTGCGCCGCGTCGCGCGCGCTACctg < 2:670706/150‑1 (MQ=255) a‑CTCGCTATCGCGAGCTGGCCCGCGAAGTCCATCCCGATCGCTTTGCCGACGCCTCCGAGCGTGAGCAGCGTATTGCGCTGGAAAAATCCGCGGCCCTCAACGACGCTTACCAGACGCTGCGCAGTGCGCCGCGTCGCGCGCGCTACctg > 2:654287/1‑150 (MQ=255) tCGCTATCGCGAGCTGGCCCGCGAAGTCCATCCTGATCGCTTTGCCGACGCCTCCGAGCGTGAGCAGCGTATTGCGCTGGAAAAATCCGCGGCCCTCAACGACGCTTAc < 1:238610/109‑1 (MQ=255) tCGCTATCGCGAGCTGGCCCGCGAAGTCCATCCTGATCGCTTTGCCGACGCCTCCGAGCGTGAGCAGCGTATTGCGCTGGAAAAATCCGCGGCCCTCAACGACGCTTAc > 2:238610/1‑109 (MQ=255) tCGCTATCGCGAGCTGGCCCGCGAAGTCCATCCTGATCGCTTTGCCGACGCCTCCGAGCGTGAGCAGCGTATTGCGCTGGAAAAATCCGCGGCCCTCAACGACGCTTACCAGACGCTGCGCAGTGCGCCGCGTCGCGCGCGCTACctgct > 1:670152/1‑150 (MQ=255) gCTATCGCGAGCTGGCCCGCGAAGTCCATCCTGATCGCTTTGCCGACGCCTCCGAGCGTGAGCAGCGTATTGCGCTGGAAAAATCCGCGGCCCTCAACGACGCTTACCAGACGCTGCGCAGTGCGCCGCGTCGCGCGCGCTAc > 1:2243146/1‑143 (MQ=255) gCTATCGCGAGCTGGCCCGCGAAGTCCATCCTGATCGCTTTGCCGACGCCTCCGAGCGTGAGCAGCGTATTGCGCTGGAAAAATCCGCGGCCCTCAACGACGCTTACCAGACGCTGCGCAGTGCGCCGCGTCGCGCGCGCTAc < 2:2243146/143‑1 (MQ=255) tATCGCGAGCTGGCCCGCGAAGTCCATCCTGATCGCTTTGCCGACGCCTCCGAGCGTGAGCAGCGTATTGCGCTGGAAAAATCCGCGGCCCTCAACGACGCTTACCAGACGCTGCGCAGTGCGCCGCGTCGCGCGCGCTACCTGCTGGcc < 2:2253847/150‑1 (MQ=255) gcgAGCTGGCCCGCGAAGTCCATCCTGATCGCTTTGCCGACGCCTCCGAGCGTGAGCAGCGTATTGCGCTGGAAAAATCCGCGGCCCTCAACGACGCTTACCAGACGCTGCGCAGTGCGCCGCGTCGCGCGCGCTACCTGCTGGCCATCa < 1:1675118/150‑1 (MQ=255) gcgAGCTGGCCCGCGAAGTCCATCCTGATAGCTTTGCAGATGCCTCCGAGCGTGAGCAGCGTCTTGCGCTGGAAAAATCCGCGGCCCTCACCGACGCTTACCAGACGCTGCGCAGTGCGCCGCGTCGCGCGCGCTACCTGCTGGCCATCa < 1:23563/150‑1 (MQ=255) cTGGCCCGCGAAGTCCATCCTGATCGCTTTGCCGACGCCTCCGAGCGTGAGCAGCGTATTGCGCTGGAAAAATCCGCGGCCCTCAACGACGCTTACCAGACGCTGCTCAGTGCGCCGCGTCGCGCGCGCTACCTGCTGGCCATCAGCGGc < 2:1746069/150‑1 (MQ=255) cTGGCCCGCGAAGTCCATCCTGATCGCTTTGCCGACGCCTCCGAGCGTGAGCAGCGTATTGCGCTGGAAAAATCCGCGGCCCTCAACGACGCTTACCAGACGCTGCGCAGTGCGCCGCGTCGCGCGCGCTACCTGCTGGCCATCAGCGGc < 2:2273575/150‑1 (MQ=255) | ACAACCCCAACGTGCGCGGTGAGTGTGGCTGCGGCGAAAGCTTCAACGTTTGAGGCTGGCTGTGGGTACTCCTTGTCATTACGCATTGTTTGACCTCCAGCCAAGCTTCCGTCTGGATCTCGACAAGCTGGCCA‑CTCGCTATCGCGAGCTGGCCCGCGAAGTCCATCCTGATCGCTTTGCCGACGCCTCCGAGCGTGAGCAGCGTATTGCGCTGGAAAAATCCGCGGCCCTCAACGACGCTTACCAGACGCTGCGCAGTGCGCCGCGTCGCGCGCGCTACCTGCTGGCCATCAGCGGC > NC_002947/980501‑980798 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |