Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 1,289,852 Δ1 bp 6.4% coding (1119/2349 nt) PP_1126 → hydrolase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029471,289,8520T. 6.4% 296.7 / 13.8 94coding (1119/2349 nt)PP_1126hydrolase
Reads supporting (aligned to +/- strand):  ref base T (50/38);  new base . (3/3);  total (53/41)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.95e-01

GATGGGCACCCGTTCTATTCCCTGGGGGTGAACGCCGTGGCGGCAGACGGCGGGCGTACCTATGTCGCCGGGCGCGAAGGCATGTTCAAGGCCTTGCCCGCTGAGGGCGATGCACTGGCCGCTTTCTATGGCGAAAGCAACAACGACGATGGCAATGCCTCGTCGCAAGGGCGCAATTTCAAGCAGGGGCGCTGGTTCGACTTCTACGCCGCCAACCTGCAGCGTACCTATGGCAAACCCTGCCGGCCCGCAGTGGAGGGCCAGCCAGCCGATTGCGCGCCGCCGGTGCTGGATGCCGA  >  NC_002947/1289703‑1290001
                                                                                                                                                     |                                                                                                                                                      
gATGGGCACCCGTTCTATTCCCTGGGGGTGAACGCCGTGGCGGCAGACGGCGGGCGTACCTATGTCGCCGGGCGCGAAGGCATGTTCAAGGCCTTGCCCGCTGAGGGCGATGCACTGGCCGCTTTCTATGGCGAAAGCAACAACGACGAt                                                                                                                                                        <  1:227038/150‑1 (MQ=255)
     gCACCCGTTCCATTCCCTGGGGGTGAACGCCGTGGCGGCAGACGGCGGGCGTACCTATGTCGCCGGGCGCGAAGGCATGTTCAAGGCCTTGCCCGCTGAGGGCGATGCACTGGCCGCTTTCTATGGCGAAAGCAACAACGACGATGGCaa                                                                                                                                                   >  2:2059550/1‑150 (MQ=255)
       aCCCGTTCTATTCCCTGGGGGTGAACGCCGTGGCGGCAGACGGCGGGCGTACCTATGTCGCCGGGCGCGAAGGCATGTTCAAGGCCTTGCCCGCTGAGGGCGATGCACTGGCCGCTTTCTATGGCGAAAGCAACAACGACGATgg                                                                                                                                                      >  2:1442011/1‑145 (MQ=255)
       aCCCGTTCTATTCCCTGGGGGTGAACGCCGTGGCGGCAGACGGCGGGCGTACCTATGTCGCCGGGCGCGAAGGCATGTTCAAGGCCTTGCCCGCTGAGGGCGATGCACTGGCCGCTTTCTATGGCGAAAGCAACAACGACGATgg                                                                                                                                                      <  1:1442011/145‑1 (MQ=255)
       aCCCGTTCTATTCCCTGGGGGTGAACGCCGTGGCGGCAGACGGCGGGCGTACCTATGTCGCCGGGCGCGAAGGCATGTTCAAGGCCTTGCCCGCTGAGGGCGATGCACTGGCCGCTTTCTATGGCGAAAGCAACAACGACGATGGCAATg                                                                                                                                                 >  2:1857926/1‑150 (MQ=255)
           gTTCTATTCCCTGGGGGTGAACGCCGTGGCGGCAGACGGCGGGCGTACCTATGTCGCCGGGCGCGAATGCATGTTCAACGCCTTGCCCGCTGAGGCCGATGCACTGGCCGCTTTCTATGGCGCAAGCAACAACGACGATGGCAATGCCtc                                                                                                                                            <  1:574645/150‑1 (MQ=255)
            ttCTATTCCCTGGGGGTGAACGCCGTGGCGGCAGACGGCGGGCGTACCTATGTCGCCGGGCGCGAAGGCATGTTCAAGGCCTTGACCGCTGAGGGCGATGCACTGGCCGCTTTCTATGGCGAAAGCAACAACGACGAGGCATTGccatcg                                                                                                                                           >  2:1391907/1‑146 (MQ=255)
              cTATTCCCTGGGGGTGAACGCCGTGGCGGCAGACGGCGGGCGTACCTATGTCGCCGGGCGCGAAGGCATGTTCAAGGCCTTGCCCGCTGAGGGCGATGCACTGGCCGCTTTCTATGGCGAAAGCAACAACGACGATGGCAATGCCtcgtc                                                                                                                                         <  1:1155229/150‑1 (MQ=255)
               tATTCCCTGGGGGTGAACGCCGTGGCGGCAGACGGCGGGCGTACCTATGTCGCCGGGCGCGAAGGCATGTTCAAGGCCTTGCCCGCTGAGGGCGATGCACTGGCCGCTTTCTATGGCGAAAGCAACAGCGACGATTGCAATGCCtcgtcg                                                                                                                                        >  2:103937/1‑150 (MQ=255)
                 ttCCCTGGGGGTGAACGCCGTGGCGGCAGACGGCGGGCGTACCTATGTCGCCGGGCGCGAAGGCATGTTCAAGGCCTTGCCCGCTGAGGGCGATGCACTGGCCGCTTTCTATGGCGAAAGCAACAACGACGATGGCAATGCCTCGTCGCa                                                                                                                                      >  2:714028/1‑150 (MQ=255)
                  tCCCTGGGGGTGAACGCCGTGGCGGCAGACGGCGGGCGTACCTATGTCGCCGGGCGCGAAGGCATGTTCAAGGCCTTGCCCGCTGAGGGCGATGCACTGGCCGCTTTCTATGGCGAAAGCAACAACGACGATGGCAATGCCTCGTCGCaa                                                                                                                                     <  1:1700229/150‑1 (MQ=255)
                  tCCCTGGGGGTGAACGCCGTGGCGGCAGACGGCGGGCGTACCTATGTCGCCGGGCGCGAAGGCATGTTCAAGGCCTTGCCAGCTGAGGGCGATGCACTGGCCGCTTTCTATGGCGACAGCAACAACGACGATGGCAATGCCTCGTCGCaa                                                                                                                                     <  1:2232187/150‑1 (MQ=255)
                  tCCCTGGGGGTGAACGCCGTGGCGGCAGACGGCGGGCGTACCTATGTCGCCGGGCGCGAAGGCATGTTCAAGGCCTTGACCGCTGAGGGCGATGCACTGGCCGCTTTCTATGGCGAAAGCAACAACGACGAGGCATTGCCAtcgtcgttg                                                                                                                                     <  1:1391907/150‑4 (MQ=255)
                    ccTGGGGGTGAACGCCGTGGCGGCAGACGGCGGGCGTACCTATGTCGCCGGGCGCGAAGGCATGTTCAAGGCCTTGCCCGCTGAGGGCGATGCACTGGCCGCTTTCTATGGCGAAAGCAACAACGACGATGGCAATGCCTCGTCGCAAgg                                                                                                                                   <  1:2367397/150‑1 (MQ=255)
                    ccTGGGGGTGAACGCCGTGGCGGCAGACGGCGGGCGTACCTATGTCGCCGGGCGCGAAGGCATGTTCAAGGCCTTGCCCGCTGAGGGCGATGCACTGGCCGCTTTCTATGGCGAAAGCAACAACGACGATGGCAATGCCTCGTCGCAAgg                                                                                                                                   >  2:1747064/1‑150 (MQ=255)
                    ccTGGGGGTGAACGCCGTGGCGGCAGACGGCGGGCGTACATATGTCGCCGGGCGCGAAGGCATGTTCAAGGCCTTGCCCGCTGAGGGCGATGCACTGGCCGCTTTCTATGGCGAAAGCAACAACGACGATGGCAATGCCTCGTCGCAAgg                                                                                                                                   >  1:2108697/1‑150 (MQ=255)
                      tGGGGGTGAACGCCGTGGCGGCAGACGGCGGGCGTACCTATGTCGCCGGGCGCGAAGGCATGTTCAAGGCCTTGCCCGCTGAGGGCGATGCACTGGCCGCTTTCTATGGCGAAAGCAACAACGACGATGGCAATGCCTCGTCGCAAGGgc                                                                                                                                 <  1:1453598/150‑1 (MQ=255)
                           gTGAACGCCGTGGCGGCAGACGGCGGGCGTACCTATGTCGCCGGGCGCGAAGGCATGTTCAAGGCCTTGCCCGCTGAGGGCGATGCACTGGCCGCTTTCTATGGCGAAAGCAACAACGACGATGGCAATGCCTCGTCGCAAGGGCGCAAt                                                                                                                            >  1:1927289/1‑150 (MQ=255)
                              aaCGCCGTGGCGGCAGACGGCGGGCGTACCTATGTCGCCGGGCGCGAAGGCATGTTCAAGGCCTTTCCCGCTGAGGGCGATGCACTGGCCGCTTTCTATGGCGAAAGCAACAACGACGATGGCAATGCCTCGTCGCAAGGGCGCAATTTc                                                                                                                         >  2:583474/1‑150 (MQ=255)
                              aaCGCCGTGGCGGCAGACGGCGGGCGTACCTATGTCGCCGGGCGCGAAGGCATGTTCAAGGCCTTGCCCGCTGAGGGCGATGCACTGGCCGCTTTCTATGGCGAAAGCAACAACGACGAGGCATTGCCAtcgtcgttgtt                                                                                                                                   >  2:1315591/1‑135 (MQ=255)
                              aaCGCCGTGGCGGCAGACGGCGGGCGTACCTATGTCGCCGGGCGCGAAGGCATGTTCAAGGCCTTGCCCGCTGAGGGCGATGCACTGGCCGCTTTCTATGGCGAAAGCAACAACGACGAGGCATTGCCAtcgtcgttgtt                                                                                                                                   <  1:1315591/140‑6 (MQ=255)
                                    gTGGCGGCAGACGGCGGGCGTACCTATGTCGCCGGGCGCGAAGGCATGTTCAAGGCCTTGCCCGCTGAGGGCGATGCACTGGCCGCTTTCTATGGCGAAAGCAACAACGACGATGGCAATGCCTCGTCGCAAGTGCGCAATTTCAAGCAg                                                                                                                   <  1:1340222/150‑1 (MQ=255)
                                    gTGGCGGCAGACGGCGGGCGTACCTATGTCGCCGGGCGCGAAGGCATGTTCAAGGCCTTGCCCGCTGAGGGCGATGCACTGGCCGCTTTCTATGGCGAAAGCAACAACGACGATGGCAATGCCTCGTCGCAAGGGCGCAATTTCAAGCAg                                                                                                                   <  1:169171/150‑1 (MQ=255)
                                    gTGGCGGCAGACGGCGGGCGTACCTATGTCGCCGGGCGCGAAGGCATGTTCAAGGCCTTGCCCGCTGAGGGCGATGCACTGGCCGCTTTCTATGGCGAAAGCAACAACGACGATGGCAATGCCTCGTCGCAAGGGCGCAATTTCAAGCAg                                                                                                                   <  1:1857926/150‑1 (MQ=255)
                                         ggcAGACGGCGGGCGTACCTATGTCGCCGGGCGCGAAGGCATGTTCAAGGCCTTGCCCGCTGAGGGCGATGCACTGGCCGCTTTCTATGGCGAAAGCAACAACGACGATGGCAATGCCTCGTCGCAAGGGCGCAATTTCAAGCAGGGgcg                                                                                                              >  1:1544607/1‑150 (MQ=255)
                                         ggcAGACGGCGGGCGTACCTATGTCGCCGGGCGCGAAGGCATGTTCAAGGCCTTGCCCGCTGAGGGCGATGCACTGGCCGCTTTCTATGGCGAAAGCAACAACGACGATGGCAATGCCTCGTCGCAAGGGCGCAATTTCAAGCAGGGgcg                                                                                                              >  1:1076588/1‑150 (MQ=255)
                                         ggcAGACGGCGGGCGTACCTATGTCGCCGGGCGCGAAGGCATGTTCAAGGCCTTGCCCGCTGAGGGCGATGCACTGGCCGCTTTCTATGGCGAAAGCAACAACGACGAGGCATTGCCAtcgtcg                                                                                                                                        <  1:1681186/124‑1 (MQ=255)
                                         ggcAGACGGCGGGCGTACCTATGTCGCCGGGCGCGAAGGCATGTTCAAGGCCTTGCCCGCTGAGGGCGATGCACTGGCCGCTTTCTATGGCGAAAGCAACAACGACGAGGCATTGCCAtcgtcg                                                                                                                                        >  2:1681186/1‑124 (MQ=255)
                                                  ggggcgGACCTATGTCGCCGGGCGCGAGGGCATGTGCAAGGCCTGGCTCGCGGAGGGCGATGCACTGGCCGCTTTCTAGGGCGAAAGCAACAACGACGATGGCAATGCCTCGTCGCAAGGGCGCAATTTCAAGCAGGGGCGCTGGTTCGa                                                                                                     <  1:1083800/149‑1 (MQ=255)
                                                         aCCTATGTCGCCGGGCGCGAAGGCATGTTCAAGGCCTTGCCCGCTGATGGCGATGCACTGGCCGCTTTCTATGGCGAAAGCAACAACGACGATGGCAATGCCTCGTCGCAAGGGCGCAATTTCAAGCAGGGGCGCTGGTTCGACTTCTAc                                                                                              <  2:735038/150‑1 (MQ=255)
                                                         aCCTATGTCGCCGGGCGCGAAGGCATGTTCAAGGCCTTGCCCGCTGAGGGCGATGCACTGGCCGCTTTCTATGGCGAAAGCAACAACGACGATGGCAATGCCTCGTCGCAAGGGCGCAATTTCAAGCAGGGGCGCTGGTTCGACTTCTAc                                                                                              >  2:1574346/1‑150 (MQ=255)
                                                          ccTATGTCGCCGGGCGCGAAGGCATGTTCAAGGCCTTGCCCGCTGAGGGCGATGCACTGGCCGCTTTCTATGGCGAAAGCAACAACGACGATGGCAATGCCTCGTCGCAAGGGCGCAATTTCAAGCAGGGGCGCTGGTTCGACCTCTAcg                                                                                             >  1:2199064/1‑150 (MQ=255)
                                                           cTATGTCGCCGGGCGCGAAGGCATGTTCAAGGCCTTGCCCGCTGAGGGCGATGCACTGGCCGCTTTCTATGGCGAAAGCAACAACGACGATGGCAATGCCTCGTCGCAAGGGCGCAATTTCAAGCAGGGGCGCTGGTTCGACTTCTAcgc                                                                                            >  1:2082461/1‑150 (MQ=255)
                                                                   ccGGGCGCGAAGGCATGTTCAAGGCCTTGCCCGCTGAGGGCGATGCACTGGCCGCTTTCTATGGCGAAAGCAACAACGACGATGGCAATGCCTCGTCGCAAGGGCGCAATTTCAAGCAGGGGCGCTGGTTCGACTTCTACGCCGCCAAcc                                                                                    <  1:427489/150‑1 (MQ=255)
                                                                        cgcgAAGGCATGTTCAAGGCCTTGCCCGCTGAGGGCGATGCACTGGCCGCTTTCTATGGCGAAAGCAACAACGACGATGGCAATGCCTCGTCGCAAGGGCGCAATTTCAAGCAGGGGCGCTGGTTCGACTTCTACGCCGCCAACCTGCAg                                                                               <  1:999203/150‑1 (MQ=255)
                                                                         gcgAAGGCATGTTCAAGGCCTTGCCCGCTGAGGGCGATGCACTGGCCGCTTTCTATGGCGAAAGCAACAACGACGATGGCAATGCCTCGTCGCAAGGGCGCAATTTCAAGCAGGGGCGCTGGTTCGAc                                                                                                    >  1:750444/1‑128 (MQ=255)
                                                                         gcgAAGGCATGTTCAAGGCCTTGCCCGCTGAGGGCGATGCACTGGCCGCTTTCTATGGCGAAAGCAACAACGACGATGGCAATGCCTCGTCGCAAGGGCGCAATTTCAAGCAGGGGCGCTGGTTCGAc                                                                                                    <  2:750444/128‑1 (MQ=255)
                                                                           gAAGGCATGTTCAAGGCCTTGCCCGCTGAGGGCGATGCACTGGCCGCTTTCTATGGCGAAAGCAACAACGACGATGGCAATGCCTCGTCGCAAgg                                                                                                                                   <  2:1032104/95‑1 (MQ=255)
                                                                           gAAGGCATGTTCAAGGCCTTGCCCGCTGAGGGCGATGCACTGGCCGCTTTCTATGGCGAAAGCAACAACGACGATGGCAATGCCTCGTCGCAAgg                                                                                                                                   >  1:1032104/1‑95 (MQ=255)
                                                                           gAAGGCATGTTCAAGGCCTTGCCCGCTGAGGGCGATGCACTGGCCGCTTTCTATGGCGAAAGCAACAACGACGATGGCAATGCCTCGTCGCAAGGGCGCAATTTCAAGCAGGGGCGCTGGTTCGACTTCTACGCCGCCAACCTGCAGCGt                                                                            >  2:438254/1‑150 (MQ=255)
                                                                             aGGCATGTTCAAGGCCTTGCCCGCTGAGGGCGATGCACTGGCCGCTTTCTATGGCGAAAGCAACAACGACGATGGCAATGCCTCGTCGCAAGGGCGCAATTTCAAGCAGGGGCGCTGGTTCGACTTCTACGCCGCCAACCTGCAGCGTAc                                                                          <  1:2059550/150‑1 (MQ=255)
                                                                                 aTGTTCAAGGCCTTGCCCGCTGAGGGCGATGCACTGGCCGCTTTCTATGGCGAAAGCAACAACGACGATGGCAATGCCTCGTCGCAAGGGCGCAATTTCAAGCAGGGGCGCTGGTTCGACTTCTACGCCGCCAACCTGCAGCGTAc                                                                          <  2:1958832/146‑1 (MQ=255)
                                                                                 aTGTTCAAGGCCTTGCCCGCTGAGGGCGATGCACTGGCCGCTTTCTATGGCGAAAGCAACAACGACGATGGCAATGCCTCGTCGCAAGGGCGCAATTTCAAGCAGGGGCGCTGGTTCGACTTCTACGCCGCCAACCTGCAGCGTAc                                                                          >  1:1958832/1‑146 (MQ=255)
                                                                                 aTGTTCAAGGCCTTGCCCGCTGAGGGCGATGCACTGGCCGCTTTCTATGGCGAAAGCAACAACGACGATGGCAATGCCTCGTCGCAAGGGCGCAATTTCAAGCAGGGGCGCTGGTTCGACTTCTACGCCGCCAACCTGCAGCGTACCTAt                                                                      >  2:2302964/1‑150 (MQ=255)
                                                                                 aTGTTCAAGGCCTTGCCCGCTGAGGGCGATGCACTGGCCGCTTTCTATGGCGAAAGCAACAACGACGATGGCAATGCCTCGTCGCAAGGGCGCAATTTCAAGCAGGGGCGCTGGTTCGACTTCTACGCCGCCAACCTGCAGCGTACCTAt                                                                      >  2:2184033/1‑150 (MQ=255)
                                                                                 aTGTTCAAGGCCTGGCCCGCTGAGGGCGATGCACTGGCCGCTTTCTATGGCGAAAGCAACAACGACGATGGCAATGCCTCGTCGCAAGGGCGCAATTTCAAGCAGGGGCGCTGGTTCGACTTCTAGGCCGCCAACCTGCAGCGTACCTAt                                                                      >  2:729930/1‑150 (MQ=255)
                                                                                  tGTTCAAGGCCTTGCCCGCTGAGGGCGATGCACTGGCCGCTTTCTATGGCGAAAGCAACAACGACGATGGCAATGCCTCGTCGCAAGGGCGCAATTTCAAGCAGGGGCGCTGGTTCGACTTCTACGCCGCCAACCTGCAGCGTACCTATg                                                                     <  1:338128/150‑1 (MQ=255)
                                                                                   gTTCAAGGCCTTGCCCGCTGAGGGCGATGCACTGGCCGCTTTCTATGGCGAAAGCAACAACGACGATGGCAATGCCTCGTCGCAAGGGCGCAATTTCAAGCAGGGGCGCTGGTTCGACTTCTACGCCGCCAACCTGCAGCGTACCTATgg                                                                    >  2:1722303/1‑150 (MQ=255)
                                                                                    ttCAAGGCCTTGCCCGCTGAGGGCGATGCACTGGCCGCTTTCTATGGCGAAAGCAACAACGACGATGGCAATGCCTCGTCGCAAGGGCGCAATTTCAAGCAGGGGCGCTGGTTCGACTTCTACGCCGCCAACCTGCAGCGTACCTATGGc                                                                   >  2:1684245/1‑150 (MQ=255)
                                                                                    ttCAAGGCCTTGCCCGCTGAGGGCGATGCACTGGCCGCTTTCTATGGCGAAAGCAACAACGACGATGGCAATGCCTCGTCGCAAGGGCGCAATTTCAAGCAGGGGCGCTGGTTCGACTTCTACGCCGCCAACCTGCAGCGTACCTATGGc                                                                   >  1:307550/1‑150 (MQ=255)
                                                                                       aaGGCCTTGCCCGCTGAGGGCGCTGCGCGGGCCGCTTTCTATGGCGAAAGCAACAACGACGATGGCAATGCCTCGTCGCAAGGGCGCAATTTCAAGCAGGGGCGCTGGTTCGACTTCTACGCCGCCAACCTGCAGCGTACCTATGGCaaa                                                                >  1:931642/1‑150 (MQ=255)
                                                                                       aaGGCCTTGCCCGCTGAGGGCGATGCACTGGCCGCTTTCTATGGCGAAAGCAACAACGACGATGGCAATGCCTCGTCGCAAGGGCGCAATTTCAAGCAGGGGCGCTGGTTCGACTTCTACGCCGCCAACCTGCAGCGTACCTATGGCaaa                                                                >  2:1963677/1‑150 (MQ=255)
                                                                                        aGGCCTTGCCCGCTGAGGGCGATGCACTGGCCGCTTTCTATGGCGAAAGCAACAACGACGATGGCAATGCCTCGTCGCAAGGGCGCAATTTCAAGCAGGGGCGCTGGTTCGACTTCTACGCCGCCAACCTGCAGCGTACCTATGGCAAAc                                                               <  1:321052/150‑1 (MQ=255)
                                                                                        aGGCCTTGCCCGCTGAGGGCGATGCACTGGCCGCTTTCTATGGCGAAAGCAACAACGACGATGGCAATGCCTCGTCGCAAGGGCGCAATTTCAAGCAGGGGAGCTGGTTCGACTTCTACGCCGCCAACCTGCAGCGTACCTATGGCAAAc                                                               >  2:1474516/1‑150 (MQ=255)
                                                                                          gCCTTGCCCGCTGAGGGCGATGCACTGGCCGCTTTCTATGGCGAAAGCAACAACGACGATGGCAATGCCTCGTCGCAAGGGCGCAATTTCAAGCAGGGGCGCTGGTTCGACTTCTAc                                                                                              >  1:1245258/1‑117 (MQ=255)
                                                                                          gCCTTGCCCGCTGAGGGCGATGCACTGGCCGCTTTCTATGGCGAAAGCAACAACGACGATGGCAATGCCTCGTCGCAAGGGCGCAATTTCAAGCAGGGGCGCTGGTTCGACTTCTAc                                                                                              <  2:1245258/117‑1 (MQ=255)
                                                                                             ttGCCCGCTGAGGGCGATGCACTGGCCGCTTTCTATGGCGAAAGCAACAACGACGATGGCCATGCCTCGTCGCAAGGGCGCAATTTCAAGCAGGGGCGCTGGTTCGACTTCTACGCCGCCAACCTGCAGCGTACCTATGGCAAACCCTGc                                                          >  2:1783199/1‑150 (MQ=255)
                                                                                             ttGCCCGCTGAGGGCGATGCACTGGCCGCTTTCTATGGCGAAAGCAACAACGACGATGGCAATGCCTCGTCGCAAGGGCGCAATTTCAAGCAGGGGCGCTGGTTCGACTTCTACGCCGCCAACCTGCAGCGTACCTATGGCAAACCCTGc                                                          <  1:729930/150‑1 (MQ=255)
                                                                                             ttGCCCGCTGAGGGCGATGCACTGGCCGCTTTCTATGGCGAAAGCAACAACGACGATGGCAATGCCTCGTCGCAAGGGCGCAATTTCAAGCAGGGGCGCTGGTTCGACTTCTACGCCGCCAACCTGCAGCGTACCTATGGCAAACCCTGc                                                          >  2:684628/1‑150 (MQ=255)
                                                                                             ttGCCCGCTGAGGGCGATGCACTGGCCGCTTTCTATGGCGAAAGCAACAACGACGATGGCAATGCCTCGTCGCAAGGGCGCAATTTCAAGCAGGGGCGCTGGTTCGACTTCTACGCCGCCAACCTGCAGCGTACCTATGGCAAACCCTGc                                                          >  1:48987/1‑150 (MQ=255)
                                                                                               gCCCGCTGAGGGCGATGTACTGGCCGCTTTCTATGGCGAAAGCAACAACGACGATGGCAATGCCTCGTCGCAAGGGCGCAATTTCAAGCAGGGGCGCTGGTTCGACTTCTACGCCGCCAACCTGCAGCGTACCTATGGCAAACCCTGCCg                                                        >  2:1229613/1‑150 (MQ=255)
                                                                                                 ccGCTGAGGGCGATGCACTGGCCGCTTTCTATGGCGAAAGCAACAACGACGATGGCAATGCCTCGTCGCAAGGGCGCAATTTCAAGCAGGGGCGCTGGTTCGACTTCTACGCCGCCAACCTGCAGCGTACCTATGGCAAACCCTGCCGGc                                                      >  1:1724084/1‑150 (MQ=255)
                                                                                                  cGCTGAGGGCGATGCACTGGCCGCTTTCTATGGCGAAAGCAACAACGACGATGGCAATGCCTCGTCGCAAGGGCGCAATTTCAAGCAGGGGCGCTGGTTCGACTTCTACGCCGCCAACCTGCAGCGTACCTATGGCAAACCCTGCCGGcc                                                     >  2:2347595/1‑150 (MQ=255)
                                                                                                   gCTGAGGGCGATGCACTGGCCGCTTTCTATGGCGAAAGCAACAACGACGATGGCAATGCCTCGTCGCAAGGGCGCAATTTCAAGCAGGGGCGCTGGTTCGACTTCTACGCCGCCAACCTGCAGCGTACCTATGGCAAACCCTGCCGGccc                                                    <  1:2347595/150‑1 (MQ=255)
                                                                                                      gAGGGCGATGCACTGGCCGCTTTCTATGGCGAAAGCAACAACGACGATGGCAATGCCTCGTCGCAAGGGCGCAATTTCAAGCAGGGGAGCTGGTTCGACTTCTACGCCGCCAACCTGCAGCGTACCTATGGCAAACCCTGCCGGCCCGCa                                                 <  1:1474516/150‑1 (MQ=255)
                                                                                                         ggNGATGCACTGGCCGCTTTCTATGGCNAAAGCAACAACGNCGATGGNANTGCCTCGTCGCAAGGGCGCAATTTCAAGCAGGGGCGCTGGTTCGACTTCTACGCCGCCAACCTGCAGCGTACCTATGGCAAACCCTGCCGGCCCGCAGTg                                              >  1:1435476/1‑150 (MQ=255)
                                                                                                         ggCGATGCACTGGCCGCTTTCTATGGCGAAAGCAACAACGACGATGGCAATGCCTCGTCGCAAGGGCGCAATTTCAAGCAGGGGCGCTGGTTCGACTTCTACGCCGCCAACCTGCAGCGTACCTATGGCAAACCCTGCCGGCCCGCAGTg                                              >  1:1639233/1‑150 (MQ=255)
                                                                                                           cGATGAGCTGGCCGCTTTCTATGGCGAAAGCAACAACGACGATGGCAATGCCTCGTCGCAAGGGCGCAATTTCAAGCAGGGGCGCTGGTTCGACTTCTACGCCGCCAACCTGCAGCGTACCTATGGCAAACCCTGCCGGCCCGCAGTGGa                                            <  1:714028/150‑1 (MQ=255)
                                                                                                              tGCACTGGCCGCTTTCTATGGCGAAAGCAACAACGACGATGGCAATGCCTCGTCGCAAGGGCGCAATTTCAAGCAGGGGCGCTGGTTCGACTTCTACGCCGCCAACCTGCAGCGTACCTATGGCAAACCCTGCCGGCCCGCAGTGGAggg                                         >  1:359724/1‑150 (MQ=255)
                                                                                                               gCACTGGCCGCTTTCTATGGCGAAAGCAACAACGACGATGGCAATGCCTCGTCGCAAGGGCGCAATTTCAAGCAGGGGCGCTGGTTCGACTTCTACGCCGCCAACCTGCAGCGTACCTATGGCAAACCCTGCCGGCCCGCAGTGGAGGgc                                        >  2:2401003/1‑150 (MQ=255)
                                                                                                                cACTGGCCGCTTTCTATGGCGAAAGCAACAACGACGATGGCAATGCCTCGTCGCAAGGGCGCAATTTCAAGCAGGGGCGCTGGTTCGACTTCTACGCCGCCAAc                                                                                     >  1:1668252/1‑104 (MQ=255)
                                                                                                                cACTGGCCGCTTTCTATGGCGAAAGCAACAACGACGATGGCAATGCCTCGTCGCAAGGGCGCAATTTCAAGCAGGGGCGCTGGTTCGACTTCTACGCCGCCAAc                                                                                     <  2:1668252/104‑1 (MQ=255)
                                                                                                                 aCTGGCCGCTTTCTATGGCGAAAGCAACAACGACGATGGCAATGCCTCGTCGCAAGGGCGCAATTTCAAGCAGGGGCGCTGGTTCGACTTCTACGCCGCCAACCTGCAGCGTACCTATGGCAAACCCTGCCGGCCCGCAGTGGAGGgcca                                      <  1:1574346/150‑1 (MQ=255)
                                                                                                                  cTGGCCGCTTTCTATGGCGAAAGCAACAACGACGATGGCAATGCCTCGTCGCAAGGGCGCAATTTCAAGCAGGGGCGCTGGTTCGACTTCTACGCCGCCAACCTGCAGCGTACCTATGGCAAACCCTGCCGGCCCGCAGTGGAGGgccag                                     >  2:1198430/1‑150 (MQ=255)
                                                                                                                      ccGCTTTCTATGGCGAAAGCAACAACGACGATGGCAATGCCTCGTCGCAAGGGCGCAATTTCAAGCAGGGGCGCTGGTTCGACTTCTACGCCGCCAACCTGCAGCGTTCCTATGGCAAACCCTGCCGGCCCGCGATGGAGGGccagccag                                 >  2:738858/1‑150 (MQ=255)
                                                                                                                      ccGCTTTCTATGGCGAAAGCAACAACGACGATGGCAATGCCTCGTCGCAAGGGCGCAATTTCAAGCAGGGGCGCTGGTTCGACTTCTACGCCGCCAACCTGCAGCGTACCTATGGCAAACCCTGCCGGCCCGCAGTGGAGGGccagccag                                 >  2:1992344/1‑150 (MQ=255)
                                                                                                                       cGCTTTCTATGGCGAAAGCAACAACGACGATGGCAATGCCTCGTCGCAAGGGCGCAATTTCAAGCAGGGGCGCTGGTTCGACTTCTACGCCGCCAACCTGCAGCGTACCTATGGCAAACCCTGCCGGCCCGCAGTGGAGGgccagcca                                  <  2:311130/148‑1 (MQ=255)
                                                                                                                       cGCTTTCTATGGCGAAAGCAACAACGACGATGGCAATGCCTCGTCGCAAGGGCGCAATTTCAAGCAGGGGCGCTGGTTCGACTTCTACGCCGCCAACCTGCAGCGTACCTATGGCAAACCCTGCCGGCCCGCAGTGGAGGgccagcca                                  >  1:311130/1‑148 (MQ=255)
                                                                                                                       cGCTTTCTATGGCGAAAGCAACAACGACGATGGCAATGCCTCGTCGCAAGGGCGCAATTTCAAGCAGGGGCGCTGGTTCGACTTCTACGCCGCCAACCTGCAGCGTACCTATGGCAAACCCTGCCGGCCCGCAGTGGAGGGCcagccagc                                <  1:583474/150‑1 (MQ=255)
                                                                                                                        ggtttCTATGTAGAAATCAACAACGACGATGGCAATGCCTCGTCGCAAGGGCGCAATTTCAAGCAGGGGCGCTGGTTCGACTTCTACGCCGCCAACCTGCAGCGTACCTATGGCAAACCCTGCCGGCCCGCAGTGGAGGGCCagccagcc                               <  2:1267186/148‑1 (MQ=255)
                                                                                                                           ttCTATGGCGAAAGCAACAACGACGATGGCAATGCCTCGTCGCAAGGGCGCAATTTCAAGCAGGGGCGCTGGTTCGACTTCTACGCCGCCAACCTGCAGCGTACCTATGGCAAACCCTGCCGGCCCGCAGTGGAGGGCCAGCCAGCCGAt                            <  2:946927/150‑1 (MQ=255)
                                                                                                                            tCTATGGCGAAAGCAACAACGACGATGGCAATGCCTCGTCGCAAGGGCGCAATTTCAAGCAGGGGCGCTGGTTCGACTTCTACGCCGCCAACCTGCAGCGTACCTATGGCAAACCCTGCCGGCCCGCAGTGGAGGGCCAGCCAGCCGAtt                           <  2:2108697/150‑1 (MQ=255)
                                                                                                                            tCTATGGCGAAAGCAACAACGACGATGGCAATGCCTCGTCGCAAGGGCGCAATTTCAAGCAGGGGCGCTGGTTCGACTTCTACGCCGCCAACCTGCAGCGTACCTATGGCAAACCCTGCCGGCCCGCAGTGGAGGGCCAGCCAGCCGAtt                           <  2:1927289/150‑1 (MQ=255)
                                                                                                                              tATGGCGAAAGCAACAACGACGATGGCAATGCCTCGTCGCAAGGGCGCAATTTCAAGCAGGGGCGCTGGTTCGACTTCTACGCCGCCAACCTGCAGCGTACCTATGGCAAACCCTGCCGGCCCGCAGTGGAGGGCCAGCCAGCCGATTgc                         >  1:339648/1‑150 (MQ=255)
                                                                                                                                        gCAACAACGACGATGGCAATGCCTCGTCGCAAGGGCGCAATTTCAAGCAGGGGCGCTGGTTCGACTTCTACGCCGCCAACCTGCAGCGTACCTATGGCAAACCCTGCCGGCCCGCAGTGGAGGGCCAGCCAGCCGATTGCGCGCCGCCgg               >  1:2141398/1‑150 (MQ=255)
                                                                                                                                          aacaacGACGATGGCAATGCCTCGTCGCAAGGGCGCAATTTCAAGCAGGGGCGCTGGTTCGACTTCTACGCCGCCAACCTGCAGCGTACCTATGGCaaa                                                                <  1:1460778/99‑1 (MQ=255)
                                                                                                                                          aacaacGACGATGGCAATGCCTCGTCGCAAGGGCGCAATTTCAAGCAGGGGCGCTGGTTCGACTTCTACGCCGCCAACCTGCAGCGTACCTATGGCaaa                                                                >  2:1460778/1‑99 (MQ=255)
                                                                                                                                          aacaacGACGATGGCAATGCCTCGTCGCAAGGGCGCAATTTCAAGCAGGGGCGCTGGTTCGACTTCTACGCCGCCAACCTGCAGCGTACCTATGGCAAACCCTGCCGGCCCGCAGTg                                              <  1:603063/117‑1 (MQ=255)
                                                                                                                                          aacaacGACGATGGCAATGCCTCGTCGCAAGGGCGCAATTTCAAGCAGGGGCGCTGGTTCGACTTCTACGCCGCCAACCTGCAGCGTACCTATGGCAAACCCTGCCGGCCCGCAGTg                                              >  2:603063/1‑117 (MQ=255)
                                                                                                                                              acgacgATGGCAATGCCTCGTCGCAAGGGCGCAATTTCAAGCAGGGGCGCTGGTTCGACTTCTACGCCGCCAACCTGCAGCGTACCTATGGCAAACCCTGCCGGCCCGCAGTGGAGGGCCAGCCAGCCGa                             >  2:1285278/1‑130 (MQ=255)
                                                                                                                                              acgacgATGGCAATGCCTCGTCGCAAGGGCGCAATTTCAAGCAGGGGCGCTGGTTCGACTTCTACGCCGCCAACCTGCAGCGTACCTATGGCAAACCCTGCCGGCCCGCAGTGGAGGGCCAGCCAGCCGa                             <  1:1285278/130‑1 (MQ=255)
                                                                                                                                              acgacgATGGCAATGCCTCGTCGCAAGGGCGCAATTTCAAGCAGGGGCGCTGGTTCGACTTCTACGCCGCCAACCTGCAGCGTACCTATGGCAAACCCTGCCGGCCCGCAGTGGAGGGCCAGCCAGCCGATTGCGCGCCGCCGGTGCTgg         <  1:1229613/150‑1 (MQ=255)
                                                                                                                                               cgacgaTGGCAATGCCTCGTCGCAAGGGCGCAATTTCAAGCAGGGGCGCTGGTTCGACTTCTACGCCGCCAACCTGCAGCGTACCTATGGCAAACCCTGCCGGCCCGCAGTGGAGGGCCAGCCAGCCGATTGCGCGCCGCCGGTGCTGGa        <  2:2141398/150‑1 (MQ=255)
                                                                                                                                                   gaTGGCAATGCCTCGTCGCAAGGGCGCAATTTCAAGCAGGGGCGCTGGTTCGACTTCTACGCCGCCAACCTGCAGCGTACCTATGGCAAACCCTGCCGGCCCGCAGTGGAGGGCCAGCCAGCCGATTGCGCGCCGCCGGTGCTGGATGcc    >  2:438041/1‑150 (MQ=255)
                                                                                                                                                   gaTGGCAATGCCTCGTCGCAAGGGCGCAATTTCAAGCAGGGGCGCTGGTTCGACTTCTACGCCGCCAACCTGCAGCGTACCTATGGCAAACCCTGCCGGCCCGCAGTGGAGGGCCAGCCAGCCGATTGCGCGCCGCCGGTGCTGGATGcc    >  2:7161/1‑150 (MQ=255)
                                                                                                                                                     tGGCAATGCCTCGTGGCAACGGGGCAGTCCCAAGCCGGTGGGCTGGGTGGATGTCTACGCCGCGAATCTGCAGCGGACCTATGGCAAACCCGGCCGGCCCGCAGTGGAGGGCCAGACCGCCGATTGCCCGCTGCCGGTGCTGGATGCCGa  <  2:759974/150‑1 (MQ=255)
                                                                                                                                                     |                                                                                                                                                      
GATGGGCACCCGTTCTATTCCCTGGGGGTGAACGCCGTGGCGGCAGACGGCGGGCGTACCTATGTCGCCGGGCGCGAAGGCATGTTCAAGGCCTTGCCCGCTGAGGGCGATGCACTGGCCGCTTTCTATGGCGAAAGCAACAACGACGATGGCAATGCCTCGTCGCAAGGGCGCAATTTCAAGCAGGGGCGCTGGTTCGACTTCTACGCCGCCAACCTGCAGCGTACCTATGGCAAACCCTGCCGGCCCGCAGTGGAGGGCCAGCCAGCCGATTGCGCGCCGCCGGTGCTGGATGCCGA  >  NC_002947/1289703‑1290001

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: