Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 2,408,406:1 +T 6.2% coding (202/1566 nt) PP_2111 ← aerotaxis receptor

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029472,408,4061.T 6.2% 383.7 / 18.6 97coding (202/1566 nt)PP_2111aerotaxis receptor
Reads supporting (aligned to +/- strand):  ref base . (44/47);  new base T (3/3);  total (47/50)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.26e-01

CCGCACCGACTCGAAGCCGACAACCTGGTTGTTATCGAAAATGGGGGTGACATAGGCGTTGACCCAGTAATGGTCGCCGGACTTGCAGCGGTTCTTGACGATACCCATCCACGGCTGGCCCTGCTTGAGGGTTTGCCACATATG‑GGCAAACACGGCAGGCGGTACGTCGGGGTGGCGCACCAGGTTGTGCGGTGCGCCCGTCAGCTCCTCGCGGGTGAAACCACTGATTTCGATAAAGGCATCGTTGCAGTAGGTGATCACACCCTTGGCGTTGGTAGTGGAGATCAACCGC  >  NC_002947/2408263‑2408554
                                                                                                                                                |                                                                                                                                                    
ccGCACCGACTCGAAGCCGACAACCTGGTTGTTATCGAAAATGGGGGTGACATAGGCGTTGACCCAGTAATGGTCGCCGGACTTGCAGCGGTTCTTGACGATACCCATCCACGGCTGGCCCTGCTTGAGGGTTTGCCACATATG‑GGCaaa                                                                                                                                                >  2:2096642/1‑150 (MQ=255)
ccGCACCGACTCGAAGCCGACAACCTGGTTGTTATCGAAAATGGGGGTGACATAGGCGTTGACCCAGTAATGGTCGCCGGACTTGCAGCGGTTCTTGACCATACCCATCCACGGCTGGCCCTGCTTGAGGGTTTGCCACATATG‑GGCaaa                                                                                                                                                >  2:2096702/1‑150 (MQ=255)
      cGACTCGAAGCCGACAACCTGGTTGTTATCGAAAATGGGGGTGACATAGGCGTTGACCCAGTAATGGTCGCCGGACTTGCAGCGGTTCTTGACGATACCCATCCACGGCTGGCCCTGCTTGAGGGTTTGCCACATATG‑GGCAAACACGGc                                                                                                                                          <  1:2134777/150‑1 (MQ=255)
         cTCGAAGCCGACAACCTGGTTGTTATCGAAAATGGGGGTGACATAGGCGTTGACCCAGTAATGGTCGCCGGACTTGCAGCGGTTCTTGACGATACCCATCCACGGCTGGCCCTGCTTGAGGGTTTGCCACATATG‑GGCAAACACGGCAgg                                                                                                                                       >  2:2100163/1‑150 (MQ=255)
              aGCCGACAACCTGGTTGTTATCGAAAATGGGGGTGACATAGGCGTTGACCCAGTAATGGTCGCCGGACTTGCAGCGGTTCTTGACGATACCCATCCACGGCTGGCCCTGCTTGAGGGTTTGCCACATATG‑GGCAAACACGGCAGGCGGTa                                                                                                                                  <  2:1937085/150‑1 (MQ=255)
                       ccTGGTTGTTATCGAAAATGGGGGTGACATAGGCGTTGACCCAGTAATGGTCGCCGGACTTGCAGCGGTTCTTGACGCGGCCTATCCACGGCTGGCCCTGCTTGAGGGCTTGCCACATATG‑GGCAAACACGGCAGGCGGTACGTCGGGGt                                                                                                                         >  1:2223018/1‑150 (MQ=255)
                       ccTGGTTGTTATCGAAAATGGGGGTGACATAGGCGTTGACCCAGTAATGGTCGCCGGACTTGCAGCGGTTCTTGACGATACCCATCCACGGCTGGCCCTGCTTGAGGGTTTGCCACATATG‑GGCAAACACGGCAGGCGGTACGTCGGGGt                                                                                                                         >  2:2353610/1‑150 (MQ=255)
                        cTGGTTGTTATCGAAAATGGGGGTGACATAGGCGTTGACCCAGTAATGGTCGCCGGACTTGCAGCGGTTCTTGACGATACCCATCCACGGCTGGCCCTGCTTGAGGGTTTGCCACATATG‑GGCAAACACGGCAGGCGGTACGTCGGGGTg                                                                                                                        <  2:177638/150‑1 (MQ=255)
                         tGGTTGTTATCGAAAATGGGGGTGACATAGGCGTTGACCCAGTAATGGTCGCCGGACTTGCAGCGGTTCTTGACGATACCCATCCACGGCTGGCCCTGCTTGAGGGTTTGCCACATATG‑GGCAAACACGGCAGGCGGTACGTCGGGGTgg                                                                                                                       >  2:2297249/1‑150 (MQ=255)
                            ttgttATCGAAAATGGGGGTGACATAGGCGTTGACCCAGTAATGGTCGCCGGACTTGCAGCGGTTCTTGACGATACCCATCCACGGCTGGCCCTGCTTGAGGGTTTGCCACATATG‑GGCAAACACgg                                                                                                                                           <  2:1990574/127‑1 (MQ=255)
                            ttgttATCGAAAATGGGGGTGACATAGGCGTTGACCCAGTAATGGTCGCCGGACTTGCAGCGGTTCTTGACGATACCCATCCACGGCTGGCCCTGCTTGAGGGTTTGCCACATATG‑GGCAAACACgg                                                                                                                                           >  1:1990574/1‑127 (MQ=255)
                            ttgttATCGAAAATGGGGGTGACATAGGCGTTGACCCAGTAATGGTCGCCGGACTTGCAGCGGTTCTTGACGATACCCATCCACGGCTGGCCCTGCTTGAGGGTTTGCCACATATG‑GGCAAACACGGCAGGCGGTACGTCGGGGTGgcgc                                                                                                                    <  1:234349/150‑1 (MQ=255)
                             tgttATCGAAAATGGGGGTGACATAGGCGTTGACCCAGTAATGGTCGCCGGACTTGCAGCGGTTCTTGACGATACCCATCCACGGCTGGCCCTGCTTGAGGGTTTGCCACATATG‑GGCAAACACGGCAGGCGGTACGTCGGGGTGGCGCa                                                                                                                   <  1:1558151/150‑1 (MQ=255)
                               gcaTCGAAAATGGGGGTGACATAGGCGTTGACCCAGTAATGGTCGCCGGACTTGCAGCGGTTCTTGACGATACCCATCCACGGCTGGCCCTGCTTGAGGGTTTGCCACATATG‑GGCAAACACGGCAGGCGGTACGTCGGGGTGGCGCAcc                                                                                                                 >  1:1892729/3‑150 (MQ=255)
                                 aTCGAAAATGGGGGTGACATAGGCGTTGACCCAGTAATGGTCGCCGGACTTGCAGCGGTTCTTGACGATACCCATCCACGGCTGGCCCTGCTTGAGGGTTTGCCACATATG‑GGCAAACACGGCAGGCGGTACGTCggg                                                                                                                           >  2:1194110/1‑138 (MQ=255)
                                 aTCGAAAATGGGGGTGACATAGGCGTTGACCCAGTAATGGTCGCCGGACTTGCAGCGGTTCTTGACGATACCCATCCACGGCTGGCCCTGCTTGAGGGTTTGCCACATATG‑GGCAAACACGGCAGGCGGTACGTCggg                                                                                                                           <  1:1194110/138‑1 (MQ=255)
                                  tCGAAAATGGGGGTGACATAGGCGTTGACCCAGTAATGGTCGCCGGACTTGCAGCGGTTCTTGACGATACCCATCCACGGCTGGCCCTGCTTGAGGGTTTGCCACATATG‑GGCAAACACGGCAGGCGGTACGTCGGGGTGGCGCACCAgg                                                                                                              >  1:1675677/1‑150 (MQ=255)
                                    gAAAATGGGGGTGACATAGGCGTTGACCCAGTAATGGTCGCCGGACTTGCAGCGGTTCTTGACGATACCCATCCACGGCTGGCCCTGCTTGAGGGTTTGCCACATATG‑GGCAAACACGGCAGGCGGTACGTCGGGGTGGCGCACCAGGtt                                                                                                            >  2:2062979/1‑150 (MQ=255)
                                    gAAAATGGGGGTGACATAGGCGTTGACCCAGTAATGGTCGCCGGACTTGCAGCGGTTCTTGACGATACCCATCCACGGCTGGCCCTGCTTGAGGGTTTGCCACATATG‑GGCAAACACGGCAGGCGGTACGTCGGGGTGGCGCACCAGGtt                                                                                                            <  2:539372/150‑1 (MQ=255)
                                       aaTGGGGGTGACATAGGCGTTGACCCCGTAATGGTAGCATGACTTGCAGCGGTTCTTGACGATACCCATCCACGGCTGGCCCTGCTTCAGGGTTTGCCACATATG‑GGCAAACACGGCAGGCGGTACGTCGGGGTGGCGCACCAGGTtgtg                                                                                                         <  1:1705995/150‑1 (MQ=37)
                                        aTGGGGGTGACATAGGCGTTGACCCAGTAATGGTCGCCGGACTTGCAGCGGTTCTTGACGATACCCATCCACGGCTGGCCCTGCTTGAGGGTTTGCCACATATG‑GGCAAACACGGCAGGCGGTACGTCGGGGTGGCGCACCAGGTTgtgc                                                                                                        <  1:1389428/150‑1 (MQ=255)
                                           ggggTGACATAGGCGTTGACCCAGTAATGGTCGCCGGACTTGCAGCGGTTCTTGACGATACCCATCCACGGCTGGCCCTGCTTGAGGGTTTTCCACATATG‑GGCAAACACGGCAGGCGGTACGTCGGGGTGGCGCACCAGGTTgtgcggt                                                                                                     <  1:2100163/150‑1 (MQ=255)
                                             ggTGACATAGGCGTTGACCCAGTAATGGTCGCCGGACTTGCAGCGGTTCTTGACGATACCCATCCACGGCTGGCCCTGCTTGAGGGTTTGCCACATATG‑GGCAAACACg                                                                                                                                            >  2:1314317/1‑109 (MQ=255)
                                             ggTGACATAGGCGTTGACCCAGTAATGGTCGCCGGACTTGCAGCGGTTCTTGACGATACCCATCCACGGCTGGCCCTGCTTGAGGGTTTGCCACATATG‑GGCAAACACg                                                                                                                                            <  1:1314317/109‑1 (MQ=255)
                                             ggTGACATAGGCGTTGACCCAGTAATGGTCGCCGGACTTGCAGCGGTTCTTGACGATACCCATCCACGGCTGGCCCTGCTTGAGGGTTTGCCACATATG‑GGCAAACACGGCAGGCGGTACGTAGGGGTGGCGCACCAGGTTgtgcggtgc                                                                                                   >  1:1103748/1‑150 (MQ=255)
                                              gTGACATAGGCGTTGACCCAGTAATGGTCGCCGGACTTGCAGCGGTTCTTGACGATACCCATCCACGGCTGGCCCTGCTTGAGGGTTTGCCACATATg‑g                                                                                                                                                     <  1:435524/99‑1 (MQ=255)
                                              gTGACATAGGCGTTGACCCAGTAATGGTCGCCGGACTTGCAGCGGTTCTTGACGATACCCATCCACGGCTGGCCCTGCTTGAGGGTTTGCCACATATg‑g                                                                                                                                                     >  2:435524/1‑99 (MQ=255)
                                               tGACATAGGCGTTGACCCAGTAATGGTCGCCGGACTTGCAGCGGTTCTTGACGATACCCATCCACGGCTGGCCCTGCTTGAGGGTTTGCCACATATG‑GGCAAACACGGCAGGCGGTACGTCGGGGTGGCGCACCAGGTTGTGCGGTgcgc                                                                                                 <  1:2353610/150‑1 (MQ=255)
                                                   aTAGGCGTTGACCCAGTAATGGTCGCCGGACTTGCAGCGGTTCTTGACGATACCCATCCACGGCTGGCCCTGCTTGAGGGTTTGCCACATATG‑GGCAAac                                                                                                                                               <  2:2229029/100‑1 (MQ=255)
                                                   aTAGGCGTTGACCCAGTAATGGTCGCCGGACTTGCAGCGGTTCTTGACGATACCCATCCACGGCTGGCCCTGCTTGAGGGTTTGCCACATATG‑GGCAAac                                                                                                                                               >  1:2229029/1‑100 (MQ=255)
                                                   aTAGGCGTTGACCCAGTAATGGTCGCCGGACTTGCAGCGGTTCTTGACGATACCCATCCACGGCTGGCCCTGCTTGAGGGTTTGCCACATATG‑GGCAAACACGGCAGGCGGTACGTCGGGGTGGCGCACCAGGTTGTGCGGTGCGCCCGt                                                                                             >  2:951918/1‑150 (MQ=255)
                                                   aTAGGCGTTGACCCAGTAATGGTCGCCGGACTTGCAGCGGTTCTTGACGATACCCATCCACGGCTGGCCCTGCTTGAGGGTTTGCCACATATG‑GCCAGTCACGGCATGCGGTACGTCGGGGTGGCGGACCAGGTTGTGCGGTAAGCCCGt                                                                                             >  1:1353276/1‑150 (MQ=255)
                                                     aGGCGTTGACCCAGTAATGGTCGCCGGACTTGCAGCGGTTCTTGACGATACCCATCCACGGCTGGCCCTGCTTGAGGGTTTGCCACATATG‑GGCAAACACGGCAGGCGGTACGTCGGGGTGGCGCACCAGGTTGTGCGGTGCGCCCGTCa                                                                                           >  1:1084557/1‑150 (MQ=255)
                                                       gCGTTGACCCAGTAATGGTCGCCGGACTTGCAGCGGTTCTTGACGATACCCATCCACGGCTGGCCCTGCTTGAGGGTTTGCCACATATG‑GGCAAACACGGCAGGCGGTACGTCGGGGTGGCGCACCAGGTTGTGCGGTGCGCCCGTCAGc                                                                                         >  1:2303537/1‑150 (MQ=255)
                                                       gCGTTGACCCAGTAATGGTCGCCGGACTTGCAGCGGTTCTTGACGATACCCATCCACGGCTGGCCCTGCTTGAGGGTTTGCCACATATG‑GGCAAACACGGCAGGCGGTACGTCGGGGTGGCGCACCAGGTTGTGCGGTGCGCCCGTCAGc                                                                                         >  1:1848935/1‑150 (MQ=255)
                                                              cccAGTAATGGTCGCCGGACTTGCAGCGGTTCTTGACGATACCCATCCACGGCTGGCCCTGCTTGAGGGTTTGCCACATATG‑GGCAAACACGGCAGGCGGt                                                                                                                                   >  2:2343796/1‑101 (MQ=255)
                                                              cccAGTAATGGTCGCCGGACTTGCAGCGGTTCTTGACGATACCCATCCACGGCTGGCCCTGCTTGAGGGTTTGCCACATATG‑GGCAAACACGGCAGGCGGt                                                                                                                                   <  1:2343796/101‑1 (MQ=255)
                                                               ccAGTAATGGTCGCCGGACTTGCAGCGGTTCTTGACGATACCCATCCACGGCTGGCCCTGCTTGAGGGTTTGCCACATATG‑GGCAAACACGGCAGGCGGTACGTCGGGGTGGCGCACCAGGTTgtgcggt                                                                                                     <  2:303268/130‑1 (MQ=255)
                                                               ccAGTAATGGTCGCCGGACTTGCAGCGGTTCTTGACGATACCCATCCACGGCTGGCCCTGCTTGAGGGTTTGCCACATATG‑GGCAAACACGGCAGGCGGTACGTCGGGGTGGCGCACCAGGTTgtgcggt                                                                                                     >  1:303268/1‑130 (MQ=255)
                                                               ccAGTAATGGTCGCCGGACTTGCAGCGGTTCTTGACGATACCCATCCACGGCTGGCCCTGCTTGAGGGTTTGCCACATATG‑GGCAAACACGGCAGGCGGTACGTCGGGGTGGCGCACCAGGTTGTGCGGTGCGCCCGTCAGCTCCTcgcg                                                                                 <  2:2223018/150‑1 (MQ=255)
                                                               ccAGTAATGGTCGCCGGACTTGCAGCGGTTCTTGACGATACCCATCCACGGCTGGCCCTGCTTGAGGGTTTGCCACATATG‑GGCAAACACGGCAGGCGGTACGTCGGCGTGGCGGAACAGGTTGTGCGGTGCGCCCGTCAGCTCCTcgcg                                                                                 >  1:2354412/1‑150 (MQ=255)
                                                                cAGTAATGGTCGCCGGACTTGCAGCGGTTCTTGACGATACCCATCCACGGCTGGCCCTGCTTGAGGGTTTGCCACATATG‑GGCAAACACGGCAGGCGGTACGTCGGGGTGGCGCACCAGGTTGTGCGGTGCGCCCGTCAGCTCCTCGCgg                                                                                <  1:2096642/150‑1 (MQ=255)
                                                                cAGTAATGGTCGCCGGACTTGCAGCGGTTCTTGACGATACCCATCCACGGCTGGCCCTGCTTGAGGGTTTGCCACATATG‑GGCAAACACGGCAGGCGGTACGTCGGGGTGGCGCACCAGGTTGTGCGGTGCGCCCGTCAGCTCCTCGCgg                                                                                <  2:2274917/150‑1 (MQ=255)
                                                                cAGTAATGGTCGCCGGACTTGCAGCGGTTCTTGACCATACCCATCCACGGCTGGCCCTGCTTGCGGGCTTGCCACATACG‑GGCAAACACGGCAGGCGGTACGTCGGGGTGGCGCACCAGGTTGTGCGGTGCGCCCGTCAGCTCCTCGCgg                                                                                <  1:2096702/150‑1 (MQ=255)
                                                                cAGTAATGGTCGCCGGACCTGCAGCGGTTCTTGACGATACCCATCCACGGCTGGCCCTGCTTGAGGGTTTGCCACATATG‑GGCAAACACGGCAGGCGGTACGTCGGGGTGGCGCACCAGGTTGTGCGGTGCGCCCGTCAGCTCCTCGCgg                                                                                <  1:1898507/150‑1 (MQ=255)
                                                                  gTAATGGTCGCCGGACTTGCAGCGGTTCTTGTCGATACCCATCCACGGCTGGCCCTGCTTGAGGGTTTGCCACATATG‑GGCAAACACGGCAGGCGGTACGTCGGGGTGGCGCACCAGGTTGTGCGGTGCGCCCGTCAGCTCCTCGCGGGt                                                                              <  1:749729/150‑1 (MQ=255)
                                                                  gTAATGGTCGCCGGACTTGCAGCGGTTCTTGACGATACCCATCCACGGCTGGCCCTGCTTGAGGGTTTGCCACATATG‑GGCAAACACGGCAGGCGGTACGTCGGGGTGGCGCACCAGGTTGTGCGGTGCGCCCGTCAGCTCCTCGCGGGt                                                                              >  1:1445910/1‑150 (MQ=255)
                                                                      tGGTCGCCGGACTTGCAGCGGTTCTTGACGATACCCATCCACGGCTGGCCCTGCTTGAGGGTTTGCCACATATG‑GGCAAACACGGCAGGCGGTACGTCGGGGTGGCGCACCAGGTTGTGCGGTGCGCCCGTCAGCTCCTCGCGGGTGaaa                                                                          <  1:1194731/150‑1 (MQ=255)
                                                                        gTCGCCGGACTTGCAGCGGTTCTTGACGATACCCATCCACGGCTGGCCCTGCTTGAGGGTTTGCCACATATG‑GGCAAACACGGCAGGCGGTACGTCGGGGTGGCGCACCAGGTTGTGCGGTGCGCCCGTCAGCTCCTCGCGGGTGAAAcc                                                                        >  1:882137/1‑150 (MQ=255)
                                                                          cGCCGGACTTGCAGCGGTTCTTGACGATACCCATCCACGGCTGGCCCTGCTTGAGGGTTTGCCACATATG‑GGCAAACACGGCAGGCGGTACGTCGGGGTGGCGCACCAGGTTGTGCGGTTCGCCCGTCAGCTCCTCGCGGGTGAAACCAc                                                                      <  1:316768/150‑1 (MQ=255)
                                                                           gCCGGACTTGCAGCGGTTCTTGACGATACCCATCCACGGCTGGCCCTGCTTGAGGGTTTGCCACATATG‑GGCAAACACGGCAGGCGGTACGTCGGGGTGGCGCACCAGGTTGTGCGGTGCGCCCGTCAGCTCCTCGCGGGTGAAACCACt                                                                     <  2:1848935/150‑1 (MQ=255)
                                                                           gCCGGACTTGCAGCGGTTCTTGACGATACCCATCCACGGCTGGCCCTGCTTGAGGGTTTGCCACATATG‑GGCAAACACGGCAGGCGGTACGTCGGGGTGGCGCACCAGGTTGTGCGGTGCGCCCGTCAGCTCCTCGCGGGTGAAACCACt                                                                     <  1:951918/150‑1 (MQ=255)
                                                                           gCCGGACTTGCAGCGGTTCTTGACGATACCCATCCACGGCTGGCCCTGCTTGAGGGTTTGCCACATATG‑GGCAAACACGGCAGGCGGTACGTCGGGGTGGCGCACCAGGTTGTGCGGTGCGCCCGTCAGCTCCTCGCGGGTGAAACCACt                                                                     >  2:2092500/1‑150 (MQ=255)
                                                                                 cTTGCAGCGGTTCTTGACGATACCCATCCACGGCTGGCCCTGCTTGAGGGTTTGCCACATATG‑GGCAAACACGGCAGGCGGTACGTCGGGGTGGCGCACCAGGTTGTGCGGTGCGCCCGTCAGCTCCTCGCGGGTGAAACCACTGATTTc                                                               >  1:1038117/1‑150 (MQ=255)
                                                                                   tGCAGCGGTTCTTGACGATACCCATCCACGGCTGGCCCTGCTTGAGGGTTTGCCACATATG‑GGCAAACACGGCAGGCGGTACGTCGGGGTGGCGCACCAGGTTGTGCGGTGCGCCCGTCAGCTCCTCGCGGGTGAAACCACTGATTTCGa                                                             <  1:2092500/150‑1 (MQ=255)
                                                                                    gCAGCGGTTCTTGACGATACCCATCCACGGCTGGCCCTGCTTGAGGGTTTGCCACATATG‑GGCAAACACGGCAGGCGGTACGTCGGGGTGGCGCACCAGGTTGTGCGGTGCGCCCGTCAGCTCCTCGCGGGTGAAACCACTGATTTCGAt                                                            >  2:97694/1‑150 (MQ=255)
                                                                                    gCAGCGGTTCTTGACGATACCCATCCACGGCTGGCCCTGCTTGAGGGTTTGCCACATATG‑GGCAAACACGGCAGGCGGTACGTCGGGGTGGCGCACCAGGTTGTGCGGTGCGCCCGTCAGCTCCTCGCGGGTGAAACCACTGATTTCGAt                                                            >  1:609547/1‑150 (MQ=255)
                                                                                      aGCGGTTCTTGACGATACCCATCCACGGCTGGCCCTGCTTGAGGGTTTGCCACATATG‑GGCAAACACGGCAGGCGGTACGTCGGGGTGGCGCACCAGGTTGTGCGGTGCGCCCGTCAGCTCCTCGCGGGTGAAACCACTGATTTCGATaa                                                          >  1:764704/1‑150 (MQ=255)
                                                                                         ggTTCTTGACGATACCCATCCACGGCTGGCCCTGCTTGAGGGTTTGCCACATATG‑GGCAAACACGGCAGGCGGTACGTCGGGGTGGCGCACCAGGTTGTGCGGTGCGCCCGTCAGCTCCTCGCGGGTGAAACCACTGATTTCGATAAAgg                                                       <  2:1852044/150‑1 (MQ=255)
                                                                                            tCTTGACGATACCCATCCACGGCTGGCCCTGCTTGAGGGTTTGCCACATATG‑GGCAAACACGGCAGGCGGTACGTCGGGGTGGCGCACCAGGTTGTGCGGTGCGCCCGTCAGCTCCTCGCGGGTGAAACCACTGATTTCGATAAAGGCAt                                                    <  2:1084557/150‑1 (MQ=255)
                                                                                            tCTTGACGATACCCATCCACGGCTGGCCCTGCTTGAGGGTTTGCCACATATG‑GGCAAACACGGCAGGCGGTACGTCGGGGTGGCGCACCAGGTTGTGCGGTGCGCCCGTCAGCTCCTCGCGGGTGAAACCACTGATTTCGATAAAGGCAt                                                    <  2:1675677/150‑1 (MQ=255)
                                                                                             cTTGACGATACCCATCCACGGCTGGCCCTGCTTGAGGGTTTGCCACATATG‑GGCAAACACGGCAGGCGGTACGTCGGGGTGGCGCACCAGGTTGTGCGGTGCGCCCGTCAGCTCCTCGCGGGTGAAACCACTGATTTCGATAAAGGCATc                                                   <  2:764704/150‑1 (MQ=255)
                                                                                              ttGACGATACCCATCCACGGCTGGCCCTGCTTGAGGGTTTGCCACATATG‑GGCAAACACGGCAGGCGGTACGTCGGGGTgg                                                                                                                       <  1:2256815/81‑1 (MQ=255)
                                                                                              ttGACGATACCCATCCACGGCTGGCCCTGCTTGAGGGTTTGCCACATATG‑GGCAAACACGGCAGGCGGTACGTCGGGGTgg                                                                                                                       >  2:2256815/1‑81 (MQ=255)
                                                                                              ttGACGATACCCATCCACGGCTGGCCCTGCTTGAGGGTTTGCCACATATG‑GGCAAACACGGCAGGCGGTACGTCGGGGTGGCGCACCAGGTTGTGCGGTGCGCCCGTc                                                                                            >  1:1013864/1‑108 (MQ=255)
                                                                                              ttGACGATACCCATCCACGGCTGGCCCTGCTTGAGGGTTTGCCACATATG‑GGCAAACACGGCAGGCGGTACGTCGGGGTGGCGCACCAGGTTGTGCGGTGCGCCCGTc                                                                                            <  2:1013864/108‑1 (MQ=255)
                                                                                              ttGACGATACCCATCCACGGCTGGCCCTGCTTGAGGGTTTGCCACATATG‑GGCAAACACGGCAGGCGGTACGTCGGGGTGGCGCACCAGGTTGTGCGGTGCGCCCGTCAGCTCCTCGCGGGTGAAACCACTGATTTCGATAAAGGCATCg                                                  <  2:1445910/150‑1 (MQ=255)
                                                                                              ttGACGATACCCATCCACGGCTGGCCCTGCTTGAGGGTTTGCCACATATG‑CGCAAACACGGCAGGCGGTACGTCGGGGTGGCGCACCAGGTTGTGCGGTGCGCCCGTCAGCTCCTCGCGGGTGAAACCACTGATTTCGATAAAGGCATCg                                                  >  1:1042993/1‑150 (MQ=255)
                                                                                                gACGATACCCATCCACGGCTGGCCCTGCTTGAGGGTTTGCCACATATG‑GGCAAACACGGCAGGCGGTACGTCGGGGTGGCGCACCAGGTTGTGCGGTGCGCCCGTCAGCTCCTCGCGGGTGAAACCACTGATTTCGATAAAGGCATCGtt                                                >  2:1521617/1‑150 (MQ=255)
                                                                                                       cccATCCACGGCTGGCCCTGCTTGAGGGTTTGCCACATATG‑GGCAAACACGGCAGGCGGTACGTCGGGGTGGCGCACCAGGTTGTGCGGTGCGCCCGTCAGCTCCTCGCGGGTGAAACCACTGATTTCGATAAAGGCATCGTTg                                               <  1:2037749/144‑1 (MQ=255)
                                                                                                       cccATCCACGGCTGGCCCTGCTTGAGGGTTTGCCACATATG‑GGCAAACACGGCAGGCGGTACGTCGGGGTGGCGCACCAGGTTGTGCGGTGCGCCCGTCAGCTCCTCGCGGGTGAAACCACTGATTTCGATAAAGGCATCGTTg                                               >  2:2037749/1‑144 (MQ=255)
                                                                                                        ccATCCACGGCTGGCCCTGCTTGAGGGTTTGCCACATATG‑GGCAAACACGGCAGGCGGTACGTCGGGGTGGCGCACCAGGTTGTGCGGTGCGCCGGTCAGCTCCTCGCGGGTGAAACCACTGATTTCGATAAAGGCATCGTTGCAGTAgg                                        <  2:1892729/150‑1 (MQ=255)
                                                                                                        ccATCCACGGCTGGCCCTGCTTGAGGGTTTGCCACATATG‑GGCAAACACGGCAGGCGGTACGTCGGGGTGGCGCACCAGGTTGTGCGGTGCGCCCGTCAGCTCCTCGCGGGTGAAACCACTGATTTCGATAAAGGCATCGTTGCAGTAgg                                        >  1:1734055/1‑150 (MQ=255)
                                                                                                         cATCGACGTCTAGCCTTGCTTTAGGGTTTGCCACATATG‑GGCAAACACGGCAGGCGGTACGTCGGGGTGGCGCACCAGGTTGTGCGGTGCGCCCGTCAGCTCCTGGCGGGTGAAACCACTGATTTCGATAAAGGCATCGTTGCAGTAGGt                                       <  2:882137/150‑1 (MQ=38)
                                                                                                         cATCCACGGCTGGCCCTGCTTGAGGGTTTGCCACATATG‑GGCAAACACGGCAGGCGGTACGTCGGGGTGGCGCACCAGGTTGTGCGGTGCGccc                                                                                               <  2:1426474/94‑1 (MQ=255)
                                                                                                         cATCCACGGCTGGCCCTGCTTGAGGGTTTGCCACATATG‑GGCAAACACGGCAGGCGGTACGTCGGGGTGGCGCACCAGGTTGTGCGGTGCGccc                                                                                               >  1:1426474/1‑94 (MQ=255)
                                                                                                         cATCCACGGCTGGCCCTGCTTGAGGGTTTGCCACATATG‑GGCAAACACGGCAGGCGGTACGTCGGGGTGGCGCACCAGGTTGTGCGGTGCGCCCGTCAGCTCCTCGCgg                                                                                >  2:1344727/1‑109 (MQ=255)
                                                                                                         cATCCACGGCTGGCCCTGCTTGAGGGTTTGCCACATATG‑GGCAAACACGGCAGGCGGTACGTCGGGGTGGCGCACCAGGTTGTGCGGTGCGCCCGTCAGCTCCTCGCgg                                                                                <  1:1344727/109‑1 (MQ=255)
                                                                                                         cATCCACGGCTGGCCCTGCTTGAGGGTTTGCCACATATG‑GGCAAACACGGCAGGCGGTACGTCGGGGTGGCGCACCAGGTTGTGCGGTGCGCCCGTCAGCTCCTCGCGGGTGAAACCACTGATTTCGATAAAGGCATCGTTGCAGTAGGt                                       >  1:2153162/1‑150 (MQ=255)
                                                                                                          aTCCACGGCTGGCCCTGCTTGAGGGTTTGCCACATATG‑GGCAAACACGGCAGGCGGTACGTCGGGGTGGCGCACCAGGTTGTGCGGTGCGCCCGTCAGCTCCTCGCGGGTGAAACCACTGATTTCGATAAAGGCATCGTTGCAGTAGGTg                                      >  2:1046900/1‑150 (MQ=255)
                                                                                                           tCCACGGCTGGCCCTGCTTGAGGGTTTGCCACATATG‑GGCAAACACGGCAGGCGGTACGTCGGGGTGGCGCACCAGGTTGTGCGGTGCGCCCGTCAGCTCCTCGCGGGTGAAACCACTGATTTCGATAAAGGCATCGTTGCAGTAGGTGa                                     <  2:609547/150‑1 (MQ=255)
                                                                                                             cACGGCTGGCCCTGCTTGAGGGTTTGCCACATATG‑GGCAAACACGGCAGGCGGTACGTCGGGGTGGCGCACCAGGTTGTGCGGTGCGCCCGTCAGCTCCTCGCGGGTGAAACCACTGATTTCGATAAAGGCATCGTTGCAGTAGGTGATc                                   <  2:1038117/150‑1 (MQ=255)
                                                                                                                            ttGAGGGTTTGCCACATATG‑GGCAAACACGGCAGGCGGTACGTCGGGGTGGCGCACCAGGTTGTGCGGTGCGCCCGTCAGCTCCTCGCGGGTGAAACCACTGATTTCGATAAAGGCATCGTTGCAGTAGGTGATCACACCCTTGGCGTTg                    <  1:722556/150‑1 (MQ=255)
                                                                                                                              ccgtgTTTGCC‑CATATGTGGCAAACACGGCAGGCGGTACGTCGGGGTGGCGCACCAGGTTGTGCGGTGCGCCCGTCAGCTCCTCGCGGGTGAAACCACTGATTTCGATAAAGGCATCGTTGCAGTAGGTGATCACACCCTTGGCGTTGGt                  >  1:2333280/5‑150 (MQ=255)
                                                                                                                                 tgTTTGCC‑CATATGTGGCAAACACGGCAGGCGGTACGTCGGGGTGGCGCACCAGGTTGTGCGGTGCGCCCGTCAGCTCCTCGCgg                                                                                <  1:1690446/84‑1 (MQ=38)
                                                                                                                                 tgTTTGCC‑CATATGTGGCAAACACGGCAGGCGGTACGTCGGGGTGGCGCACCAGGTTGTGCGGTGCGCCCGTCAGCTCCTCGCgg                                                                                >  2:1690446/2‑85 (MQ=37)
                                                                                                                                 tgTTTGCC‑CATATGTGGCAAACACGGCAGGCGGTACGTCGGGGTGGCGCACCAGGTTGTGCGGTGCGCCCGTCAGCTCCTCGCGGGTGAAACCACTGATTTCGATAAAg                                                        >  2:425126/2‑109 (MQ=39)
                                                                                                                                 tgTTTGCC‑CATATGTGGCAAACACGGCAGGCGGTACGTCGGGGTGGCGCACCAGGTTGTGCGGTGCGCCCGTCAGCTCCTCGCGGGTGAAACCACTGATTTCGATAAAg                                                        <  1:425126/108‑1 (MQ=39)
                                                                                                                                  gTTTGCCACATATG‑GGCAAACACGGCAGGCGGTACGTCGGGGTGGCGCACCAGGTTGTGCGGTGCGCCCGTCAGCTCCTCGCGGGTGAAACCACTGATTTCGATAAAGGCATCGTTGCAGTAGGTGATCACACCCTTGGCGTTGGTAGTg              <  2:2303537/150‑1 (MQ=255)
                                                                                                                                   tttGCCACATATG‑GGCAAACACGGCAGGCGGTACGTCGGGGTGGCGCACCAGGTTGTGCGGTGCGCCCGTCAGCTCCTCGCGGGTGAAACCACTGATTTCGATAAAGGCATCGTTGCAGTAGGCGATCACACCCTTGGCGTTGGTAGTgg             <  2:2354412/150‑1 (MQ=255)
                                                                                                                                    ttGCCACATATG‑GGCAAACACGGCAGGCGGTACGTCGGGGTGGCGCACCAGGTTGTGCGGTGCGCCCGTCAGCTCCTCGCGGGTGAAACCACTGATTTCGATAAAGGCATCGTTGCAGTAGGTGATCACACCCTTGGCGTTGGTAGTGga            >  1:2031433/1‑150 (MQ=255)
                                                                                                                                     tGCCACATATG‑GGCAAACACGGCAGGCGGTACGTCGGGGTGGCGCACCAGGTTGTGCGGTGCGCCCGTCAGCTCCTCGCGGGTGAAACCACTGATTTCGATAAAGGCATCGTTGCAGTAGGTGATCACACCCTTGGCGTTGGTAGTGgag           <  1:2062979/150‑1 (MQ=255)
                                                                                                                                       gcccaTATGTGGCAAACACGGCAGGCGGTACGTCGGGGTGGCGCACCAGGTTGTGCGGTGCGCCCGTCAGCTCCTCGCGGGTGAAACCACTGATTTCGATAAAGGCATCGTTGCAGTAGGTGATCACACCCTTGGCGTTGGTAGTGgaga          <  2:2333280/147‑1 (MQ=255)
                                                                                                                                       ccACATATG‑GGCAAACACGGCAGGCGGTACGTCGGGGTGGCGCACCAGGTTGTGCGGTGCGCCCGTCAGCTCCTCGCGGGTGAAACCACTGATTTCGATaaa                                                         >  2:950136/1‑102 (MQ=255)
                                                                                                                                       ccACATATG‑GGCAAACACGGCAGGCGGTACGTCGGGGTGGCGCACCAGGTTGTGCGGTGCGCCCGTCAGCTCCTCGCGGGTGAAACCACTGATTTCGATaaa                                                         <  1:950136/102‑1 (MQ=255)
                                                                                                                                       ccACATATG‑GGCAAACACGGCAGGCGGTACGTCGGGGTGGCGCACCAGGTTGTGCGGTGCGCCCGTCAGCTCCTCGCGGGTGAAACCACTGATTTCGATAAAGGCATCGTTGCAGTAGGTGATCACACCCTTGGCGTTGGTAGTGGAGAt         >  2:1688362/1‑150 (MQ=255)
                                                                                                                                       ccACATATG‑GGCAAACACGGCAGCCGGTACGTCGGGGTGGCGCACCAGGTTGTGCGGTGCGCCCGTCAGCTCCTCGCGGGTGAAACCACTGATTTCGCTAAAGGCATCGTTGCAGTAGGTGATCACACCCTTGGCGTTGGTAGTGGAGAt         >  2:993793/1‑150 (MQ=255)
                                                                                                                                        cacaTATG‑GGCAAACACGGCAGGCGGTACGTCGGGGTGGCGCACCAGGTTGTGCGGTGCGCCCGTCAGCTCCTCGCGGGTGAAACCACTGATTTCGATAAAGGCATCGTCGCATTAGGTGATCACACCCTTGGCGTTGGTAGTGGAGATc        <  1:2297249/150‑1 (MQ=255)
                                                                                                                                              tG‑GGCAAACACGGCAGGCGGTACGTCGGGGTGGCGCACCAGGTTGTGCGGTGCGCCCGTCAGCTCCTCGCGGGTGAAACCACTGATTTCGATAAAGGCATCGTTGCAGTAGGTGATCACACCCTTGGCGTTGGTAGTGGAGATCAACCgc  >  2:1913310/1‑150 (MQ=255)
                                                                                                                                                |                                                                                                                                                    
CCGCACCGACTCGAAGCCGACAACCTGGTTGTTATCGAAAATGGGGGTGACATAGGCGTTGACCCAGTAATGGTCGCCGGACTTGCAGCGGTTCTTGACGATACCCATCCACGGCTGGCCCTGCTTGAGGGTTTGCCACATATG‑GGCAAACACGGCAGGCGGTACGTCGGGGTGGCGCACCAGGTTGTGCGGTGCGCCCGTCAGCTCCTCGCGGGTGAAACCACTGATTTCGATAAAGGCATCGTTGCAGTAGGTGATCACACCCTTGGCGTTGGTAGTGGAGATCAACCGC  >  NC_002947/2408263‑2408554

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑