Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 3,263,396:1 +A 6.3% coding (1194/1635 nt) PP_2861 ← methyl‑accepting chemotaxis transducer

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029473,263,3961.A 6.3% 440.2 / 22.0 111coding (1194/1635 nt)PP_2861methyl‑accepting chemotaxis transducer
Reads supporting (aligned to +/- strand):  ref base . (56/48);  new base A (4/3);  total (60/51)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.88e-01

Only 100 of 112 total aligned reads displayed.

ATGGCCTTGACCGCAGCGTCCGACTGACTCTGCAGGTGCTCGATCATGGTATGAATCTCGGCCGTCGATTGTGCTGTACGCTGAGCCAACAGTCGCACCTCGTCGGCGACCACGGCAAAGCCCCGGCCTTGCTCGCCAGCCCGTGCCGCCTCGATGGCGGCATTCAGCGCCAGCAGGTTGGTCTGTTCGGCAATGGAACGAATCACGTCCAGCACGCCGCCGATGCGCGTGCTGTGGCCGGCCAGGTCGCGGATTACCTGTACGGCCTCATCGATGGTCAGCGACAGGCGGTC  >  NC_002947/3263247‑3263539
                                                                                                                                                       |                                                                                                                                               
aTGGCCTTGACCGCAGCGTCCGACTGACTCTGCAGGTCCTCGATCATGGTATGAATCTCGGCCGTCGATTGTGCTGTACGCTGAGCCAACAGTCGCACCTCGTCGGCGACCACGGCAAAGCCCCGGCCTTGCTCGCCAGCCCGTgccgcc                                                                                                                                                  >  1:1950130/1‑150 (MQ=255)
  ggCCTTGACCGCAGCGTCCGACTGACTCTGCAGGTGCTCGATCATGGTATGAATCTCGGCCGTCGATTGTGCTGTACGCTGAGCCAACAGTCGCACCTCGTCGGCGACCACGGCAAAGCCCCGGCCTTGCTCGCCAGCCCGTGCCGCCTc                                                                                                                                               <  2:1848890/150‑1 (MQ=255)
    ccTTGACCGCAGCGTCCGACTGACTCTGCAGGTGCTCGATCATGGTATGAATCTCGGCCGTCGATTGTGCTGTACGCTGAGCCAACAGTCGCACCTCGTCGGCGACCACGGCAAAGCCCCGGCCTTGCTCGCCAGCCCGTGCCGCCTCGa                                                                                                                                             >  1:121647/1‑150 (MQ=255)
      ttGACCGCAGCGTCCGACTGACTCTGCAGGTGCTCGATCATGGTATGAATCTCGGCCGTCGATTGTGCTGTACGCTGAGCCAACAGTCGCACCTCGTCGGCGACCACGGCAAAGCCCCGGCCTTGCTCGCCAGCCCGTGCCGCCTCGATg                                                                                                                                           >  2:1692654/1‑150 (MQ=255)
      ttGACCGCAGCGTCCGACTGACTCTGCAGGTGCTCGATCATGGTATGAATCTCGGCCGTCGATTGTGCTGTACGCTGAGCCAACAGTCGCACCTCGTCGGCGACCACGGCAAAGCCCCGGCCTTGCTCGCCAGCCCGTGCCGCCTCGATg                                                                                                                                           >  2:1275854/1‑150 (MQ=255)
         aCCGCAGCGTCCGACTGACTCTGCAGGTGCTCGATCATGGTATGAATCTCGGCCGTCGATTGTGCTGTACGCTGAGCCAACAGTCGCACCTCGTCGGCGACCACGGCAAAGCCCCGGCCTTGCTCGCCAGCCCGTGCCGCCTCGATggcg                                                                                                                                        >  1:1875590/1‑150 (MQ=255)
           cGCAGCGTCCGACTGACTCTGCAGGTGCTCGATCATGGTATGAATCTCGGCCGTCGATTGTGCTGTACGCTGAGCCAACAGTCGCACCTCGTCGGCGACCACGGCAAAGCACCGGCCTTGCTCGCCAGCCCGTGCCGCCTCGATggcggc                                                                                                                                      >  2:1074503/1‑150 (MQ=255)
             cAGCGTCCGACTGACTCTGCAGGTGCTCGATCATGGTATGAATCTCGGCCGTCGATTGTGCTGTACGCTGAGCCAACAGTCGCACCTCGTCGGCGACCACGGCAAAGCCGCGGCCTTGCTCGCCAGCCCGTGCCGCCATCGAGGCGGCac                                                                                                                                    <  2:398547/150‑2 (MQ=38)
             cAGCGTCCGACTGACTCTGCAGGTGCTCGATCATGGTATGAATCTCGGCCGTCGATTGTGCTGTACGCTGAGCCAACAGTCGCACCTCGTCGGCGACCACGGCAAAGCCCCGGCCTTGCTCGCCAGCCCGTGCCGCCTCGATGGCGGCAt                                                                                                                                    >  1:1747624/1‑150 (MQ=255)
              aGCGTCCGACTGACTCTGCAGGTGCTCGATCATGGTATGAATCTCGGCCGTCGATTGTGCTGTACGCTGAGCCAACAGTCGCACCTCGTCGGCGACCACGGCAAAGCCCCGGCCTTGCTCGCCAGCCCGTGCCGCCTCGATGGCGGCAtt                                                                                                                                   <  1:896866/150‑1 (MQ=255)
              aGCGTCCGACTGACTCTGCAGGTGCTCGATCATGGTATGAATCTCGGCCGTCGATTGTGCTGTACGCTGAGCCAACAGTCGCACCTCGTCGGCGACCACGGCAAAGCCCCGGCCTTGCTCGCCAGCCCGTGCCGCCTCGATGGCGGCAtg                                                                                                                                   <  1:202049/150‑2 (MQ=255)
                    cGACTGACTCTGCAGGTGCTCGATCATGGTATGAATCTCGGCCGTCGATTGTGCTGTACGCTGAGCCAACAGTCGCACCTCGTCGGCGACCACGGCAAAGCCCCGGCCTTGCTCGCCAGCCCGTGCCGCCTCGATGGCGGCATTCAgcgc                                                                                                                             >  2:1841202/1‑150 (MQ=255)
                     gactgactCTGCAGGTGCTCGATCATGGTATGAATCTCGGCCGTCGATTGTGCTGTACGCTGAGCCAACAGTCGCACCTCGTCGGCGACCACGGCAAAGCCCCGGCCTTGCTCGCCAGCCCGTGCCGCCTCGATGGCGGCATTCAGCGcc                                                                                                                            >  1:1820691/1‑150 (MQ=255)
                     gactgactCTGCAGGTGCTCGATCATGGTATGAATCTCGGCCGTCGATTGTGCTGTACGCTGAGCCAACAGTCGCACCTCGTCGGCGACCACGGCAAAGCCCCGGCCTTGCTCGCCAGCCCGTGCCGCCTCGATGGCGGCATTCAGCGcc                                                                                                                            >  1:935726/1‑150 (MQ=255)
                       ctgactCTGCAGGTGCTCGATCATGGTATGAATCTCGGCCGTCGATTGTGCTGTACGCTGAGCCAACAGTCGCACCTCGTCGGCGACCACGGCAAAGCCCCGGCCTTGCTCGCCAGCCCGTGCCGCCTCGATGGCGGCATTCAGCGCcag                                                                                                                          <  2:1747624/150‑1 (MQ=255)
                         gactCTGCAGGTGCTCGATCATGGTATGAATCTCGGCCGTCGATTGTGCTGTACGCTGAGCCAACAGTCGCACCTCGTCGGCGACCACGGCAAAGCCCCGGCCTTGCTCGCCAGCCCGTGCCGCCTCGATGGCGGCATTCAGCGCcagca                                                                                                                        <  2:1820691/150‑1 (MQ=255)
                          actCTGCAGGTGCTCGATCATGGTATGAATCTCGGCCGTCGATTGTGCTGTACGCTGAGCCAACAGTCGCACCTCGTCGGCGACCACGGCAAAGCCCCGGCCTTGCTCGCCAGCCCATGCCGCCATCGAGGCGGCacgg                                                                                                                                  >  2:863391/1‑136 (MQ=38)
                          actCTGCAGGTGCTCGATCATGGTATGAATCTCGGCCGTCGATTGTGCTGTACGCTGAGCCAACAGTCGCACCTCGTCGGCGACCACGGCAAAGCCCCGGCCTTGCTCGCCAGCCCATGCCGCCATCGAGGCGGCacgg                                                                                                                                  <  1:863391/139‑4 (MQ=38)
                           ctctGCAGGTGCTCGATCATGGTATGAATCTCGGCCGTCGATTGTGCTGTACGCTGAGCCAACAGTCGCACCTCGTCGGCGACCACGGCAAAGCCCCGGCCTTGCTCGCCAGCCCGTGCCGCCTCGATTGCGGCATTCGGCGCCAGCAgg                                                                                                                      <  2:398884/150‑1 (MQ=255)
                              tGCAGGTGCTCGATCATGGTATGAATCTCGGCCGTCGATTGTGCTGTACGCTGAGCCAACAGTCGCACCTCGTCGGCGACCACGGCAAAGCCCCGGCCTTGCTCGCCAGCCCGTGCCGCCTCGATGGCGGCATTCAGCGCCAGCAGGTTg                                                                                                                   >  1:1973493/1‑150 (MQ=255)
                                cAGGTGCTCGATCATGGTATGAATCTCGGCCGTCGATTGTGCTGTACGCTGAGCCAACAGTCGCACCTCGTCGGCGACCACGGCAAAGCCCCGGCCTTGCTCGCCAGCCCGTGCCGCCTCGATGGCGGCATTCAGCGCCAGCAGGTTGGt                                                                                                                 <  1:1694088/150‑1 (MQ=255)
                                    tGCTCGATCATGGTATGAATCTCGGCCGTCGATTGTGCTGTACGCTGAGCCAACAGTCGTCCCTCGTCGCTGGCCACGCTAACCGGAGAACACGCATGCGCAACCCGTACCGCCTCGATGGCGGCATTCAGCGCAAGCGGGTGGGTCTGt                                                                                                             >  1:782706/1‑150 (MQ=255)
                                       tCGATCATGGTATGAATCTCGGCCGTCGATTGTGCTGTACGCTGAGCCAACAGTCGCACCTCGTCGGCGACCACGGCAAAGCCCCGGCCTTGCTCGCCAGCCCGTGCCGCCTCGATGGCGGCATTCAGCGCCAGCAGGTTGGTCTGTTCg                                                                                                          >  2:1581547/1‑150 (MQ=255)
                                       tCGATCATGGTATGAATCTCGGCCGTCGATTGTGCTGTACGCTGAGCCAACAGTCGCACCTCGTCGGCGACCACGGCAAAGCCCCGGCCTTGCTCGCCAGCCCGTGCCGCCTCGATGGCGGCATTCAGCGCCAGCAGGTTGGTCTGTTCg                                                                                                          >  2:200982/1‑150 (MQ=255)
                                         gATCATGGTATGAATCTCGGCCGTCGATTGTGCTGTACGCTGAGCCAACAGTCGCACCTCGTCGGCGACCACGGCAAAGCCCCGGCCTTGCTCGCCAGCCCGTGCCGCCTCGATggcgg                                                                                                                                       <  1:1726626/119‑1 (MQ=255)
                                            cATGGTATGAATCTCGGCCGTCGATTGTGCTGTACGCTGAGCCAACAGTCGCACCTCGTCGGCGACCACGGCAAAGCCCCGGCCTTGCTCGCCAGCCCGTGCCGTCTCGATGGCGGCATTCAGCGCCAGCAGGTTGGTCTGTTCGGCAAt                                                                                                     <  2:304335/150‑1 (MQ=255)
                                                gTATGAATCTCGGCCGTCGATTGTGCTGTACGCTGAGCCAACAGTCGCACCTCGTCGGCGACCACGGCAAAGCCCCGGCCTTGCTCGCCAGCCCGTGCCGCCTCGATGGCGGCATTCAGCGCCAGCAGGTTGGTCTGTTCGGCAATGGaa                                                                                                 <  1:556466/150‑1 (MQ=255)
                                                 tATGAATCTCGGCCGTCGATTGTGCTGTACGCTGAGCCAACAGTCGCACCTCGTCGGCGACCACGGCAAAGCCCCGGCCTTGCTCGCCAGCCCGTGCCGCCTCGATGGCGGCATTCAGCGCCAGCAGGTTGGTCTGTTCGGCAATGGAAc                                                                                                <  1:1074503/150‑1 (MQ=255)
                                                 tATGAATCTCGGCCGTCGATTGTGCTGTACGCTGAGCCAACAGTCGCACCTCGTCGGCGACCACGGCAAAGCCCCGGCCTTGCTCGCCAGCCCGTGCCGCCTCGATGGCGGCATTCAGCGCCAGCAGGTTGGTCTGTTCGGCAATGGAAc                                                                                                >  1:1479598/1‑150 (MQ=255)
                                                      aTCTCGGCCGTCGATTGTGCTGTACGCTGAGCCAACAGTCGCACCTCGTCGGCGACCACGGCAAAGCCCCGGCCTTGCTCGCCAGCCCGTGCCGCCTCGATGGCGGCATTCAGCGCCAGCAGGTTGGTCTGTTCGGCAATGGAACGAATc                                                                                           <  2:1973493/150‑1 (MQ=255)
                                                      aTCTCGGCCGTCGATTGTGCTGTACGCTGAGCCAACAGTCGCACCTCGTCGGCGACCACGGCAAAGCCCCGGCCTTGCTCGCCAGCCCGTGCCGCCTCGATGGACGCATTCAGCGCCAGCAGGTTGGTCTGTTCGGCAATGGAACGAATc                                                                                           <  1:53238/150‑1 (MQ=255)
                                                        ctcGGCCGTCGATTGTGCTGTACGCTGAGCCAACAGTCGCACCTCGTCGGCGACCACGGCAAAGCCCCGGCCTGGCTCGCCAGCCCGTGCCGCCTCGATGGCGGCATTCAGCGCCAGCAGGTTGGTCTGTTCGGCAATGGAACGAATCAc                                                                                         <  1:1692654/150‑1 (MQ=255)
                                                           ggCCGTCGATTGTGCTGTACGCTGAGCCAACAGTCGCACCTCGTCGGCGACCACGGCAAAGCCCCGGCCTTGCTCGCCAGCCCGTGCCGCCTCGATGGCGGCATTCAGCGCCAGCAGGTTGGTCTGTTCGGCAATGGAACGAATCACGTc                                                                                      >  1:1491481/1‑150 (MQ=255)
                                                             ccGTCGATTGTGCTGTACGCTGAGCCAACAGTCGCACCTCGTCGGCGACCACGGCAAAGCCCCGGCCTTGCTCGCCAGCCCGTGCCGCCTCGATGGCGGCATTCAGCGCCAGCAGGTTg                                                                                                                   >  1:1788977/1‑119 (MQ=255)
                                                             ccGTCGATTGTGCTGTACGCTGAGCCAACAGTCGCACCTCGTCGGCGACCACGGCAAAGCCCCGGCCTTGCTCGCCAGCCCGTGCCGCCTCGATGGCGGCATTCAGCGCCAGCAGGTTg                                                                                                                   <  2:1788977/119‑1 (MQ=255)
                                                             ccGTCGATTGTGCTGTACGCTGAGCCAACAGTCGCACCTCGTCGGCGACCACGGCAAAGCCCCGGCCTTGCTCGCCAGCCCGTGCCGCCTCGATGGCGGCATTCAGCGCCAGCAGGTTGGTCTGTTCGGCAATGGAACGAATCACGTCCa                                                                                    <  2:731241/150‑1 (MQ=255)
                                                             ccGTCGATTGTGCTGTACGCTGAGCCAACAGTCGCACCTCGTCGGCGACCACGGCAAAGCCCCGGCCTTGCTCGCCAGCCCGTGCCGCCTCGATGGCGGCATTCAGCGCCAGCAGGTTGGTCTGTTCGGCAATGGAACGAATCACGTCCa                                                                                    >  1:731241/1‑150 (MQ=255)
                                                               gTCGATTGTGCTGTACGCTGAGCCAACAGTCGCACCTCGTCGGCGACCACGGCAAAGCCCCGGCCTTGCTCGCCAGCCCGTGCCGCCTCGATGGCGGCATTCAGCGCCAGCAGGTTGGTCTGTTCg                                                                                                          >  2:605772/1‑126 (MQ=255)
                                                               gTCGATTGTGCTGTACGCTGAGCCAACAGTCGCACCTCGTCGGCGACCACGGCAAAGCCCCGGCCTTGCTCGCCAGCCCGTGCCGCCTCGATGGCGGCATTCAGCGCCAGCAGGTTGGTCTGTTCg                                                                                                          <  1:605772/126‑1 (MQ=255)
                                                                tCGATTGTGCTGTACGCTGAGCCAACAGTCGCACCTCGTCGGCGACCACGGCAAAGCCCCGGCCTTGCTCGCCAGCCCGTGCCGCCTCGATGGCGGCATTCAGCGCCAGCAGGTTGGTCTGTTCGGCAATGGAACGAATCACGTCCAGCa                                                                                 >  1:447058/1‑150 (MQ=255)
                                                                   aTTGTGCTGTACGCTGAGCCAACAGTCGCACCTCGTCGGCGACCACGGCAAAGCCCCGGCCTTGCTCGCCAGCCCGTGCCGCCTCGATGGCGGCATTCAGCGCCAGCAGGTTGGTCTGTTCGGCAATGGAACGAATc                                                                                           <  2:1737024/137‑1 (MQ=255)
                                                                   aTTGTGCTGTACGCTGAGCCAACAGTCGCACCTCGTCGGCGACCACGGCAAAGCCCCGGCCTTGCTCGCCAGCCCGTGCCGCCTCGATGGCGGCATTCAGCGCCAGCAGGTTGGTCTGTTCGGCAATGGAACGAATc                                                                                           >  1:1737024/1‑137 (MQ=255)
                                                                       tgCTGTACGCTGAGCCAACAGGCGCACCTCGTCGGCGACCACGGCAAAGCCCCGGCCTTGCTCGCCAGCCCGTGCCGCCTCGATAGCGGCATTCAGCGCCAGCAGGTTGGTCTGTTCGGCAATGGAACGAATCACGTCCAGCACgccgcc                                                                          >  2:106686/1‑150 (MQ=255)
                                                                        gCTGTACGCTGAGCCAACAGTCGCACCTCGTCGGCGACCACGGCAAAGCCCCGGCCTTGCTCGCCAGCCCGTGCCGCCTCGATGGCGGCATTCAGCGCCAGCAGGtt                                                                                                                    >  2:451475/1‑107 (MQ=255)
                                                                        gCTGTACGCTGAGCCAACAGTCGCACCTCGTCGGCGACCACGGCAAAGCCCCGGCCTTGCTCGCCAGCCCGTGCCGCCTCGATGGCGGCATTCAGCGCCAGCAGGtt                                                                                                                    <  1:451475/107‑1 (MQ=255)
                                                                         cTGTACGCTGAGCCAACAGTCGCACCTCGTCGGCGACCACGGCAAAGCCCCGGCCTTGCTCGCCAGCCCGTGCCGCCTCGATGGCGGCATTCAGCGCCAGCAGGTTGGTCTGTTCGGCAATGGAACGAATCACGTCCAGCACGCCGCCGa                                                                        >  1:2104588/1‑150 (MQ=255)
                                                                          tGTACGCTGAGCCAACAGTCGCACCTCGTCGGCGACCACGGCAAAGCCCCGGCCTTGCTCGCCAGCCCGTGCCGCCTCGATGGCGGCATTCAGCGCCAGCAGGTTGGTCTGtt                                                                                                            >  2:1671806/1‑113 (MQ=255)
                                                                          tGTACGCTGAGCCAACAGTCGCACCTCGTCGGCGACCACGGCAAAGCCCCGGCCTTGCTCGCCAGCCCGTGCCGCCTCGATGGCGGCATTCAGCGCCAGCAGGTTGGTCTGTTCGGCAATGGAACGAATCACGTCCAGCACGCCGCCGAt                                                                       >  2:2176576/1‑150 (MQ=255)
                                                                          tGTACGCTGAGCCAACAGTCGCACCTCGTCGGCGACCACGGCAAAGCCCCGGCCTTGCTCGCCAGCCCGTGCCGCCTCGATGGCGGCATTCAGCGCCAGCAGGTTGGTCTGTTCGGCAATGGAACGAATCACGTCCAGCACGCCGCCGAt                                                                       >  2:1629029/1‑150 (MQ=255)
                                                                              cGCTGAGCCAACAGTCGCACCTCGTCGGCGACCACGGCAAAGCCCCGGCCTTGCTCGCCAGCCCGTGCCGCCTCGATGGCGGCATTCAGCGCCAGCAGGTTGGTCTGTTCGGCAATGGAACGAATCACGTCCAGCACGCCGCCGATgcgc                                                                   <  1:517307/150‑1 (MQ=255)
                                                                               gCTGAGCCAACAGTCGCACCTCGTCGGCGACCACGGCAAAGCCCCGGCCTTGCTCGCCAGCCCGTGCCGCCTCGATGGCGGCATTCAGCGCCAGCAGGTTGGTCTGTTCGGCAATGGAACGAATCACGTCCAGCACGCCGCCGATGcgcg                                                                  >  1:1205273/1‑150 (MQ=255)
                                                                                cTGAGCCAACAGTCGCACCTCGTCGGCGAGCACTGCAAATCTCCGGCCTTGCTCGCCAGCCCGTGCCGCCTCGATGGCGGCATTCAGCGCCAGCAGGTTGGTCTGTTCGGCAATGGAACGAATCACGTCCAGCACGCCGCCGATGCGCGt                                                                 <  2:444769/150‑1 (MQ=255)
                                                                                 tGAGCCAACAGTCGCACCTCGTCGGCGACCACGGCAAAGCCCCGGCCTTGCTCGCCAGCCCGTGCCGCCTCGATGGCGGCATTCAGCGCCAGCAGGTTGGTCTGTTCGGCAATGGAACGAATCACGTCCAGCACGCCGCCGATGCGCGTg                                                                <  2:1875590/150‑1 (MQ=255)
                                                                                     ccAACAGTCGCACCTCGTCGGCGACCACGGCAAAGCCCCGGCCTTGCTCGCCAGCCCGTGCCGCCTCGATGGCGGCATTCAGCGCCAGCAGGTTGGTCTGTTCGGCAATGGAACGAATCACGTCCAGCACGCCGCCGATGCGCGTGCtgt                                                            >  1:616328/1‑150 (MQ=255)
                                                                                     ccAACAGTCGCACCTCGTCGGCGACCACGGCAAAGCCCCGGCCTTGCTCGCCAGCCCGTGCCGCCTCGATGGCGGCATTCAGCGCCAGCAGGTTGGTCTGTTCGGCAATGGAACGAATCACGTCCAGCACGCCGCCGATGCGCGTGCtgt                                                            <  1:1275854/150‑1 (MQ=255)
                                                                                      cAACAGTCGCACCTCGTCGGCGACCACCGCAAAGCCCCGGCCTTGCTCGCCAGGCCGTGCCGCCTCGATGGCGGCATTCAGCGCCAGCAGGTTGGTCTGTTCGGCAATGGATCGAATCACGTCCAGCACGCCGCCGATGCGCGTGCtgtg                                                           <  2:782706/150‑1 (MQ=255)
                                                                                          aGTCGCACCTCGTCGGCGACCACGGCAAAGCCCCGGCCTTGCTCGCCAGCCCGTGCCGCCTCGATGGCGGCATTCAGCGCCAGCAGGTTGGTCTGTTCGGCAATGGAACGAATCACGTCCAGCACGCCGCCTAGGCGCGTGCTGTggc                                                         <  2:1192256/148‑1 (MQ=255)
                                                                                          aGTCGCACCTCGTCGGCGACCACGGCAAAGCCCCGGCCTTGCTCGCCAGCCCGTGCCGCCTCGATGGCGGCATTCAGCGCCAGCAGGTTGGTCTGTTCGGCAATGGAACGAATCACGTCCAGCACGCCGCCGATGCGCGTGCTGTggc                                                         >  1:1192256/1‑148 (MQ=255)
                                                                                              gCACCTCGTCGGCGACCACGGCAAAGCCCCGGCCTTGCTCGCCAGCCCGTGCCGCCTCGATGGCGGCATTCAGCGCCAGCAGGTTGGTCTGTTCGGCAATGGAACGAATCACGTCCAGCACGCCGCCGATGCGCGTGCTGTGGCCGGCCa                                                   >  2:628697/1‑150 (MQ=255)
                                                                                                aCCTCGTCGGCGACCACGGCAAAGCCCCGGCCTTGCTCGCCAGCCCGTGCCGCCTCGATGGCGGCATTCAGCGCCAGCAGGTTGGTCTGTTCGGCAATGGAACGAATCACGTCCAGCACGCCGCCGATGCGCCTGCTGTGGCCGGCCAgg                                                 >  2:2162540/1‑150 (MQ=255)
                                                                                                    cgtcgGCGACCACGGCCTCCCCCCGGCCTTGTTCGCCAGCCCGTGCCGCCTCGATGGCGGCATTCAGCGCCAGCAGGTTGGTCTGTTCGGCAATGGAACGAATCACGTCCAGCACGCCGCCGAGGCGCGTGCTGTGGCCGGCCAGGTcgc                                             <  1:736180/150‑1 (MQ=37)
                                                                                                          cGACCACGGCAAAGCCCCGGCCTTGCTCGCCAGCCCGTGCCGCCTCGATGGCGGCATTCAGCGCCAGCAGGTTGGTCTGTTCGGCAATGGAACGAATCACGTCCAGCAGCTCGCCGATGCGCGTGCTGTGGCCGGCCAGGTCGCGGATTa                                       >  1:23545/1‑150 (MQ=255)
                                                                                                           gACCACGGCAAAGCCCCGGCCTTGCTCGCCAGCCCGTGCCGCCTCGATGGCGGCATTCAGCGCCAGCAGGTTGGTCTGTTCGGCAATGGAACGAATCACGTCCAGCACGCCGCCGATGCGCGTGCTGTGGCCGGCCAGGTCGCGGATTAc                                      >  1:2362429/1‑150 (MQ=255)
                                                                                                              cACGGCAAAGCCCCGGCCTTGCTCGCCAGCCCGTGCCGCCTCGATGGCGGCATTCAGCGCCAGCAGGTTGGTCTGTTCGGCAATGGAACGAATCACGTCCAGCACGCCGCCGATGCGCGTGCTGTGGCCGGCCAGGTCGCGGATTACCTg                                   >  1:402767/1‑150 (MQ=255)
                                                                                                                  gCAAAGCCCCGGCCTTGCTCGCCAGCCCGTGCCGCCTCGATGGCGGCATTCAGCGCCAGCAGGTTGGTCTGTTCGGCAATGGAACGAATCACGTCCAGCACGCCGCCGATGCGCGTGCtgtg                                                           >  1:1599080/1‑122 (MQ=255)
                                                                                                                  gCAAAGCCCCGGCCTTGCTCGCCAGCCCGTGCCGCCTCGATGGCGGCATTCAGCGCCAGCAGGTTGGTCTGTTCGGCAATGGAACGAATCACGTCCAGCACGCCGCCGATGCGCGTGCtgtg                                                           <  2:1599080/122‑1 (MQ=255)
                                                                                                                  gCAAAGCCCCGGCCTTGCTCGCCAGCCCGTGCCGCCTCGATGGCGGCATTCAGCGCCAGCAGGTTGGTCTGTTCGGCAATGGAACGAATCACGTCCAGCACGCCGCCGATGCGCGTGCTGTGGCCGGCCAGGTCGCGGATTAc                                      <  1:113923/143‑1 (MQ=255)
                                                                                                                    aaaGCCCCGGCCTTGCTCGCCAGCCCGTGCCGCCTCGATGGCGGCATTCAGCGCCAGCAGGTTGGTCTGTTCGGCAATGGAACGAATCACGTCCAGCACGCCGCCGATGCGCGTGCTGTGGCCGGCCAGGTCGCGGATTACCTGTACGGc                             <  2:2362429/150‑1 (MQ=255)
                                                                                                                       gCCCCGGCCTTGCTCGCCAGCCCGTGCCGCCTCGATGGCGGCATTCAGCGCCAGCAGGTTGGTCTGTTCGGCAATGGAACGAATCACGTCCAGCACGCCGCCGATGCGCGTGCTGTGGCCGGACAGGTGGCGGATTACCTGTACGGCCtg                          <  2:284226/150‑2 (MQ=255)
                                                                                                                         cccGGCCTTGCTCGCCAGCCCGTGCCGCCTCGATGGCGGCATTCAGCGCCAGCAGGTTGGGCTGTTCGGCAATGGAACTAATCACGTCCAGCACGCCGCCGATGCGCGTGCTGTGGCCGGCCAGGTCGCGGGTTACCTGTACGGCCTcgt                        >  1:1101687/1‑148 (MQ=255)
                                                                                                                          ccGGCCTTGCTCGCCAGCCCGTGCCGCCTCGATGGCGGCATTCAGCGCCAGCAGGTTGGTCTGTTCGGCAATGGAACGAATCACGTCCAGCACGCCGCCGATGCGCCTGCTGTGGCCGGCCAGGTCGCGGATTACCTGTACGGCCTCATc                       <  1:2162540/150‑1 (MQ=255)
                                                                                                                           cGGCCTTGCTCGCCAGCCCGTGCCGCCTCGATGGCGGCATTCAGCGCCAGCAGGTTGGTCTGTTCGGCAATGGAACGAATCACGTCCAGCACGCCGCCGATGCGCGTGCTGTggcc                                                        >  1:623694/1‑116 (MQ=255)
                                                                                                                           cGGCCTTGCTCGCCAGCCCGTGCCGCCTCGATGGCGGCATTCAGCGCCAGCAGGTTGGTCTGTTCGGCAATGGAACGAATCACGTCCAGCACGCCGCCGATGCGCGTGCTGTggcc                                                        <  2:623694/116‑1 (MQ=255)
                                                                                                                             gCCTTGCTCGCCAGCCCGTGCCGCCTCGATGGCGGCATTCAGCGCCAGCAGGTTGGTCTGTTCGGCAATGGAACGAATCACGTCCAGCACGCCGCCGATGCGCGTGCTGTGGCCGGCCAGGTCGCGGATTACCTGTACGGCCTCATCGAt                    >  2:2326667/1‑150 (MQ=255)
                                                                                                                                ttGCTCGCCAGCCCGTGCCGCCTCGATGGCGGCATTCAGCGCCAGCAGGTTGGTCTGTTCGGCAATGGAACGAATCACGTCCAGCACGCCGCCGATGCGCGTGCTGTGGCCGGCCAGGTCGCGGATTACCTGTACGGCCTCATCGATGGt                 >  1:1113657/1‑150 (MQ=255)
                                                                                                                                ttGCTCGCCAGCCCGTGCCGCCTCGATGGCGGCATTAAGCGCCAGCAGGTTGGTCTGTTCGGCAATGGAACGAATCACGTCCAGCACGCCGCCGATGCGCGTGCTGTGGCCGGCCAGGGCGCGGATTACCTGTACGGCCTCATCGATGGt                 >  1:48686/1‑150 (MQ=255)
                                                                                                                                  gCTCGCCAGCCCGTGCCGCCTCGATGGCGGCATTCAGCGCCAGCAGGTTGGTCTGTTCGGCAATGGAACGAATCACGTCCAGCACGCCGCCGATGCGCGTGCTGTGGCCGGCCAGGTCGCGGATTACCTGTACGGCCTCATCGATGGTCa               <  2:402767/150‑1 (MQ=255)
                                                                                                                                    tCGCCAGCCCGTGCCGCCTCGATGGCGGCATTCAGCGCCAGCAGGTTGGTCTGTTCGGCAATGGAACGAATCACGTCCAGCACGCCGCCGATGCGCGTGCTGTGGCCGGCCAGGTCGCGGATTACCTGTACGGCCTCATCGATGGTCAGc             >  1:1752299/1‑150 (MQ=255)
                                                                                                                                    tCGCCAGCCCGTGCCGCCTCGATGGCGGCATTCAGCGCCAGCAGGTTGGTCTGTTCGGCAATGGAACGAATCACGCCCAGCACGCCGCCGATGCGCGTGCTGTGGCCGGCCAGGTCGCGGATTACCTGTACGGCCTCATCGATGGTCAGc             >  1:221953/1‑150 (MQ=255)
                                                                                                                                    tCGCCAGCCCGTGCCGCCTCGATGGCAGCATTCAGCGCCAGCAGGTTGGTCTGTTCGGCAATGGAACGAATCACGTCCAGCGCGCCGCCGATGCGCGTGCTATGGCCGGCCAGGACGCGGATTACCGGTACGGCCTCATCGATGGTCAGc             >  2:1934698/1‑150 (MQ=39)
                                                                                                                                      gCCAGCCCGTGCCGCCTCGATGGCGGCATTCAGCGCCAGCAGGTTGGTCTGTTCGGCAATGGAACGAATCACGTCCAGCACGCCGCCGATGCGCGTGCTGTGGCCGGCCAGGTCGCGGATTACCTGTACGGCCTCATCGATgg                  <  1:462179/143‑1 (MQ=255)
                                                                                                                                      gCCAGCCCGTGCCGCCTCGATGGCGGCATTCAGCGCCAGCAGGTTGGTCTGTTCGGCAATGGAACGAATCACGTCCAGCACGCCGCCGATGCGCGTGCTGTGGCCGGCCAGGTCGCGGATTACCTGTACGGCCTCATCGATgg                  >  2:462179/1‑143 (MQ=255)
                                                                                                                                      gCCAGCCCGTGCCGCCTCGATGGCGGCATTCAGCGCCAGCAGGTTGGTCTGTTCGGCAATGGAACGAATCACGTCCAGCACGCCGCCGATGCGCGTGCTGTGGCCGGCCAGGTCGCGGATTACCTGTACGGCCTCATCGATGGTCAGCGa           >  2:2149840/1‑150 (MQ=255)
                                                                                                                                          aGCCCGTGCCGCCTCGATGGCGGCATTCAGCGCCAGCAGGTTGGTCTGTTCGGCAATGGAACGAATCACGTCCAGCACGCCGCCGATGCGCGTGCTGTGGCCGGCCAGGTCGCGGATTACCTGTACGGCCTCATCGATGGTCAGCGACAg        >  1:2043308/1‑150 (MQ=255)
                                                                                                                                           gCCCGTGCCGCCTCGATGGCGGCATTCAGCGCCAGCAGGTTGGTCTGTTCGGCAATGGAACGAATCACGTCCAGCACGCCGCCGATGCGCGTGCTGTGGCCGGCCAGGTCGCGGATTACCTGTACGGCCTCATCGATGGTCa               >  2:2218450/1‑142 (MQ=255)
                                                                                                                                           gCCCGTGCCGCCTCGATGGCGGCATTCAGCGCCAGCAGGTTGGTCTGTTCGGCAATGGAACGAATCACGTCCAGCACGCCGCCGATGCGCGTGCTGTGGCCGGCCAGGTCGCGGATTACCTGTACGGCCTCATCGATGGTCa               <  1:2218450/142‑1 (MQ=255)
                                                                                                                                            tgaatGCCGCCATCGAGGCGGCATTCAGCGCCAGCAGGTTGGTCTGTTCGGCAATGGAACGAATCACGTCCAGCACGCCGCCGATGCGCGTGCTGTGGCCGGCCAGGTCGCGGATTACCTGTACGGCCTCATCGATGGTCAGCGACAGGc      >  2:409736/5‑150 (MQ=255)
                                                                                                                                             ccGTGCCGCCTCGATGGCGGCATTCAGCGCCAGCAGGTTGGTCTGTTCGGCAATGGAACGAATCACGTCCAGCACGCCGCCGATGCGCGTGCTGTGGCCGGCCAGGTCGCGGATTACCTGTACGGcc                            <  1:1319631/127‑1 (MQ=255)
                                                                                                                                             ccGTGCCGCCTCGATGGCGGCATTCAGCGCCAGCAGGTTGGTCTGTTCGGCAATGGAACGAATCACGTCCAGCACGCCGCCGATGCGCGTGCTGTGGCCGGCCAGGTCGCGGATTACCTGTACGGcc                            >  2:1319631/1‑127 (MQ=255)
                                                                                                                                             ccGTGCCGCCTCGATGGCGGCATTCAGCGCCAGCAGGTTGGTCTGTTCGGCAATGGAACGAATCACGTCCAGCACGCCGCCGATGCGCGTGCTGTGGCCGGCCAGGTCGCGGATTACCTGTACGGCCTCATCGATGGTCAGCGACAGGCg     >  1:1638270/1‑150 (MQ=255)
                                                                                                                                             ccGTGCCGCCTCGATGGCGGCATTCAGCGCCAGCAGGTTGGTCTGTTCGGCAATGGAACGAATCACGTCCAGCACGCCGCCGATGCGCGTGCTGTGGCAGCCCAGGGCGCGGATTACCTGTACGGCCTCATCGATGGTCAGCGACAGGCg     >  1:1143498/1‑150 (MQ=255)
                                                                                                                                              cGTGCCGCCTCGATGGCGGCATTCAGCGCCAGCAGGTTGGTCTGTTCGGCAATGGAACGAATCACGTCCAGCACGCCGCCGATGCGCGTGCTGTGGCCGGCCAGGTCGCGGATTACCTGTACGGCCTCATCGATGGTCAGCGACAGGCgg    <  1:200982/150‑1 (MQ=255)
                                                                                                                                              aatGCCGCCATCGAGGCGGCATTCAGCGCCAGCAGGTTGGTCTGTTCGGCAATGGAACGAATCACGTCCAGCACGCCGCCGATGCGCGTGCTGTGGCCGGCCAGGTCGCGGATTACCTGTACGGCCTCATCGATGGTCAGCGACAGGCgg    >  1:1668934/3‑150 (MQ=255)
                                                                                                                                               gTGCCGCCTCGATGGCGGCATTCAGCGCCAGCAGGTTGGTCTGTTCGGCAATGGAACGAATCACGTCCAGCACGCCGCCGATGCGCGTGCTGTGGCCGGCCAGGTcgc                                             <  2:228831/108‑1 (MQ=255)
                                                                                                                                               gTGCCGCCTCGATGGCGGCATTCAGCGCCAGCAGGTTGGTCTGTTCGGCAATGGAACGAATCACGTCCAGCACGCCGCCGATGCGCGTGCTGTGGCCGGCCAGGTcgc                                             >  1:228831/1‑108 (MQ=255)
                                                                                                                                               gTGCCGCCTCGATGGCGGCATTCAGCGCCAGCAGGTTGGTCTGTTCGGCAATGGAACGAATCACGTCCAGCACGCCGCCGATGCGCGTGCTGTGGCCGGCCAGGTCGCGGATTACCTGTACGGCCTCATCGATGGTCAGCGACAGGCGGt   <  1:1581547/150‑1 (MQ=255)
                                                                                                                                               gTGCCGCCTCGATGGCGGCATTCAGCGCCAGCAGGTTGGTCTGTTCGGCAATGGAACGAATCACGTCCAGCACGCCGCCGATGCGCGTGCTGTGGCCGGCCAGGTCGCGGATTACCTGTACGGCCTCATCGATGGTCAGCGACAGGCGGt   <  1:2176576/150‑1 (MQ=255)
                                                                                                                                               gTGCCGCCTCGATGGCGGCATTCAGCGCCAGCAGGTTGGTCTGTTCGGCAATGGAACGAATCACGTCCAGCACGCCGCCGATGCGCGTGCTGTGGCCGGCCAGGTCGCGGATTACCTGTACGGCCTCATCGATGGTCAGCGACAGGCGGt   >  2:75814/1‑150 (MQ=255)
                                                                                                                                               gTGCCGCCTCGATGGCGGCATTCAGCGCCAGCAGGTTGGTCTGTTCGGCAATGGAACGAATCACGTCCAGCACGCCGCCGATGCGCGTGCTGTGGCCGGCCAGGTCGCGGATTACCTGTACGGCCTCATCGATGGTCAGCGACAGGCGGt   <  1:106686/150‑1 (MQ=255)
                                                                                                                                                tGCCGCCATCGAGGCGGCATTCAGCGCCAGCAGGTTGGTCTGTTCGGCAATGGAACGAATCACGTCAAGCACGCCGCCGATGCGCGTGCTGTGTCCGGCCAGGTCGCGGATTACCTGTCCGGCCTCATAGGTGGTCAGGGACAGGCGGTc  >  1:825397/1‑150 (MQ=255)
                                                                                                                                                       |                                                                                                                                               
ATGGCCTTGACCGCAGCGTCCGACTGACTCTGCAGGTGCTCGATCATGGTATGAATCTCGGCCGTCGATTGTGCTGTACGCTGAGCCAACAGTCGCACCTCGTCGGCGACCACGGCAAAGCCCCGGCCTTGCTCGCCAGCCCGTGCCGCCTCGATGGCGGCATTCAGCGCCAGCAGGTTGGTCTGTTCGGCAATGGAACGAATCACGTCCAGCACGCCGCCGATGCGCGTGCTGTGGCCGGCCAGGTCGCGGATTACCTGTACGGCCTCATCGATGGTCAGCGACAGGCGGTC  >  NC_002947/3263247‑3263539

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: