Predicted mutation | |||||||
---|---|---|---|---|---|---|---|
evidence | seq id | position | mutation | freq | annotation | gene | description |
RA | NC_002947 | 3,329,643:1 | +A | 6.2% | intergenic (+104/+27) | PP_2927 → / ← PP_2928 | hypothetical protein/saccharopine dehydrogenase |
Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_002947 | 3,329,643 | 1 | . | A | 6.2% | 383.1 / 15.7 | 97 | intergenic (+104/+27) | PP_2927/PP_2928 | hypothetical protein/saccharopine dehydrogenase |
Reads supporting (aligned to +/- strand): ref base . (45/46); new base A (3/3); total (48/49) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 101 total aligned reads displayed.
CGCAGACGCCGTTCAACCTGATTCTGGAGGCCCGCAAGTAGAGCGTGATCTTGCGCCGGCCTCTTCGCGGGCTTGCCCGTTCCCACAGGTTACGTGCTTGTTTCAGGGCTGTGGCGATCCTGGACCTGGAAAGCAGAAGGGGT‑CC‑TGCATGGCACCCCTTCTGTTTGTCGCTTAGGCTTCAGCGTCCCAGGGACGATCGCCTTTTTCATCTTTGACGCGGGTCGGCAGGCCCATCACGTCCAGCGCCTTGAGGAACGGCTCGGCTGGCAGCTCCTCGACGTTGACCATGCGCTT > NC_002947/3329499‑3329792 | cGCAGACGCCGTTCAACCTGATTCTGGAGGCCCGCAAGTAGAGCGTGATCTTGCGCCGGCCTCTTCGCGGGCTTGCCCGTTCCCACAGGTTACGTGCTTGTTTCAGGGCTGTGGCGATCCTGGACCTGGAAAGCAGAAGGGGT‑CC‑TGCAt < 2:1449793/150‑1 (MQ=255) cAGACGCCGTTCAACCTGATTCTGGAGGCCCGCAAGTAGAGCGTGATCTTGCGCCGGCCTCTTCGCGGGCTTGCCCGTTCCCACAGGTTACGTGCTTGTTTCNGGGCTGNGGCGATCCTGGANCTGGAAAGCAGAAGGGGT‑CC‑TGCATgg < 1:2056773/150‑1 (MQ=255) aGACGGCGTTCTGCCTGATTCTGGAGGCCAGCAAGTAGAGCGTGATCGTGCGCCTTCCTCTTCGCGGGCTTGCCCGTTCCCACAGGTTACGTGCTTGTTTCAGGGCTGTGTCGATCCTGGACCTGGAAAGCAGAAGGGGT‑CC‑TGCATGGc > 2:92138/1‑150 (MQ=255) gACGCCGTTCAACCTGATTCTGGAGGCCCGCAAGTAGAGCGTGATCTTGCGCCGGCCTCTTCGCGGGCTTGCCCGTTCCCACAGGTTACGTGCTTGTTTCAGGGCTGTGGCGATCCTGGACCTGGAAAGCAGAAGGGGT‑CC‑TGCATGGCa < 2:545996‑M2/150‑2 (MQ=255) ccGTTCAACCTGATTCTGGAGGCCCGCAAGTAGAGCGTGATCTTGCGCAGGCCTCTTCGCGGGCTTGCCCGTTCCCACAGGTTACGTGCTTGTTTCAACATCGTGGTGATCCTGGACCTGGAAAGCAGAAGGGGT‑CC‑TGCATGGCacccc > 1:442185‑M2/1‑145 (MQ=255) aaCCTGATTCTGGAGGCCCGCAAGTAGAGCGTGATCTTGCGCCGGCCTCTTCGCGGGCTTGCCCGTTCCCACAGGTTACGTGCTTGTTTCAGGGCTGTGGCGATCCTGGACCTGGAAAGCAGAAGGGGT‑CC‑TGCATGGCACCCCTTCTGt < 2:918681/150‑1 (MQ=255) ccTGATTCTGGAGGCCCGCAAGTAGAGCGTGATCTTGCACCGGCCTCTTCGCGGGCTTGCCCGTTCCCACAGGTTACGTGCTTGTTTCAGGGCTGTGGCGATCCTGGACCTGGAAAGCAGAAGGGGT‑CC‑TGCATGGCACCCCTTCTGttt > 2:1392622/1‑150 (MQ=255) cTGATTCTGGAGGCCCGCAAGTAGAGCGTGATCTTGCGCCGGCCTCTTCGCGGGCTTGCCCGTTCCCACAGGTTACGTGCTTGTTTCAGGGCTGTGGCGATCCTGGACCTGGAAAGCAGAAGGGGT‑CC‑TGCATgg < 2:2076346/135‑1 (MQ=255) cTGATTCTGGAGGCCCGCAAGTAGAGCGTGATCTTGCGCCGGCCTCTTCGCGGGCTTGCCCGTTCCCACAGGTTACGTGCTTGTTTCAGGGCTGTGGCGATCCTGGACCTGGAAAGCAGAAGGGGT‑CC‑TGCATgg > 1:2076346/1‑135 (MQ=255) cTGATTCTGGAGGCCCGCAAGTAGAGCGTGATCTTGCGCCGGCCTCTTCGCGGGCTTGCCCGTTCCCACAGGTTACGTGCTTGTTTCAGGGCTGTGGCGATCCTGGACCTGGAAAGCAGAAGGGGT‑CC‑TGCATGGCACCCCTTCTGTTTg > 1:1321105/1‑150 (MQ=255) cTGATTCTGGAGGCCCGCAAGTAGAGCGTGATCTTGCGCCGGCCTCTTCGCGGGCTTGCCCGTTCCCACAGGTTACGTGCTTGTTTCAGGGCTGTGGCGATCCTGGACCTGGAAAACAGAAGGGGTGCCATGCA‑GGccccttctgctt > 1:1294923‑M2/1‑137 (MQ=255) cTGATTCTGGAGGCCCGCAAGTAGAGCGTGATCTTGCGCCGGCCTCTTCGCGGGCTTGCCCGTTCCCACAGGTTACGTGCTTGTTTCAGGGCTGTGGCGATCCTGGACCTGGAAAACAGAAGGGGTGCCATGCA‑GGccccttctgctt < 2:1294923‑M2/149‑13 (MQ=255) tGATTCTGGAGGCCCGCAAGTAGAGCGTGATCTTGCGCCGGCCTCTTCGCGGGCTTGCCCGTTCCCACAGGTTACGTGCTTGTTTCAGGGCTGTGGCGATCCTGGACCTGGAAAGCAGAAGGGGT‑CC‑TGCATGGCACCCCTTCTGTTTGt > 2:1963601/1‑150 (MQ=255) ggAGGCCCGCAAGTAGAGCGTGATCTTGCGCCGGCCTCTTCGCGGGCTTGCCCGTTCCCACAGGTTACGTGCTTGTTTCAGGGCTGTGGCGATCCTGGACCTGGAAAGCAGAAGGGGT‑CC‑TGCATGGCACCCCTTCTGTTTGTCGCTTAg > 1:197600/1‑150 (MQ=255) ccGCAAGTAGAGCGTGATCTTGCGCCGGCCTCTTCGCGGGCTTGCCCGTTCCCACAGGTTACGTGCTTGTTTCAGGGCTGTGGCGATCCTGGACCTGGAAAGCAGAAGGGGT‑CC‑TGCATGGCACCCCTTCTGTTTGTCGCTTAGGCTTCa < 1:1602941/150‑1 (MQ=255) ccGCAAGTAGAGCGTGATCTTGCGCCGGCCTCTTCGCGGGCTTGCCCGTTCCCACAGGTTACGTGCTTGTTTCAGGGCTGTGGCGATCCTGGACCTGGAAAGCAGAAGGGGT‑CC‑TGCATGGCACCCCTTCTGTTTGTCGCTTAGGCTTCa < 1:7867/150‑1 (MQ=255) ccGCAAGTAGAGCGTGATCTTGCGCCGGCCTCTTCGCGGGCTTGCCCGTTCCCACAGGTTACGTGCTTGTTTCAGGGCTGTGGCGATCCTGGACCTGGAAAGCAGAAGGGGT‑CC‑TGCATGGCACCCCTTCTGTTTGTCGCTTAGGCTTCa > 2:1974161/1‑150 (MQ=255) cGCAAGTAGAGCGTGATCTTGCGCCGGCCTCTTCGCGGGCTTGCCCGTTCCCACAGGTTACGTGCTTGTTTCAGGGCTGTGGCGATCCTGGACCTGGAAAGCAGAAGGGGT‑CC‑TGCATGGCACCCCTTCTGTTTGTCGCTTAGGCTTCAg > 2:2232801/1‑150 (MQ=255) gagCGTGATCTTGCGCCGGCCTCTTCGCGGGCTTGCCCGTTCCCACAGGTTACGTGCTTGTTTCAGGGCTGTGGCGATCCTGGACCTGGAAAGCAGAAGGGGT‑CC‑TGCATGGCACCCCTTCTGTTTGTCGCTTAGGCTTCAGCGTCCCAg < 1:511797/150‑1 (MQ=255) gagCGTGATCTTGCGCCGGCCTCTTCGCGGGCTTGCCCGTTCCCACAGGTTACGTGCTTGTTTCAGGGCTGTGGCGATCCTGGACCTGGAAAGCAGAAGGGGT‑CC‑TGCATGGCACCCCTTCTGTTTGTCGCTTAGGCTTCAGCGTCCCAg < 2:1936272/150‑1 (MQ=255) agCGTGATCTTGCGCCGGCCTCTTCGCGGGCTTGCCCGTTCCCACAGGTTACGTGCTTGTTTCAGGGCTGTGGCGATCCTGGACCTGGAAAGCAGAAGGGGT‑CC‑TGCATGGCACCCCTTCTGTTTGTCGCTTAGGCTTCAGCGTCCCAgg > 1:157772/1‑150 (MQ=255) agCGTGATCTTGCGCCGGCCTCTTCGCGGGCTTGCCCGTTCCCACAGGTTACGTGCTTGTTTCAGGGCTGTGGCGATCCTGGACCTGGAAAGCAGAAGGGGT‑CC‑TGCATGGCACCCCTTCTGTTTGTCGCTTAGGCTTCAGCGTCCCAgg > 1:345452/1‑150 (MQ=255) cGTGATCTTGCGCCGGCCTCTTCGCGGGCTTGCCCGTTCCCACAGGTTACGTGCTTGTTTCAGGGCTGTGGCGATCCTGGACCTGGAAAGCAGAAGGGGT‑CC‑TGCATGGCACCCCTTCTGTTTGTCGCTTAGGCTTCAGCGTCCCAGGGa < 2:1636732/150‑1 (MQ=255) cGTGATCTTGCGCCGGCCTCTTCGCGGGCTTGCCCGTTCCCACAGGTTACGTGCTTGTTTCAGGGCTGTGGCGATCCTGGACCTGGAAAGCAGAAGGGGT‑CC‑TGCATGGCACCCCTTCTGTTTGTCGCTTAGGCTTCAGCGTCCCAGGGa < 1:1495134/150‑1 (MQ=255) gTGATCTTGCGCCGGCCTCTTCGCGGGCTTGCCCGTCCCCACAGGTTACGTGCTTGTTTCAGGGCTGTGGCGATCCTGGACCTGGAAAGCAGAAGGGGT‑CC‑TGCATGGCACCCCTTCTGTTTGTCGCTTAGGCTTCAGCGTCCCAGGGAc < 1:1981462/150‑1 (MQ=255) tGATCTTGCGCCGGCCTCTTCGCGGGCTTGCCCGTTCCCACAGGTTACGTGCTTGTTTCAGGGCTGTGGCGATCCTGGACCTGGAAAGCAGAAGGGGT‑CC‑TGCATGGCACCCCTTCTGTTTGTCGCTTAGGCTTCAGCGTCCCAGGGACg > 1:1132339/1‑150 (MQ=255) gATCTTGCGCCGGCCTCTTCGCGGGCTTGCCCGTTCCCACAGGTTACGTGCTTGTTTCAGGGCTGTGGCGATCCTGGACCTGGAAAGCAGAAGGGGT‑CC‑TGCATGGCACCCCTTCTGTTTGTCGCTTAGGCTTCAGCGTCCCAGGGACGa < 2:1615690/150‑1 (MQ=255) tCTTGCGCCGGCCTCTTCGCGGGCTTGCCCGTTCCCACAGGTTACGTGCTTGTTTCAGGGCTGTGGCGATCCTGGACCTGGAAAGCAGAAGGGGT‑CC‑TGCATGGCACCCCTTCTGTTTGTCGCTTAGGCTTCAGCGTCCCAGGGACGATc > 1:677562/1‑150 (MQ=255) ttGCGCCGGCCTCTTCGCGGGCTTGCCCGTTCCCACAGGTTACGTGCTTGTTTCAGGGCTGTGGCGATCCTGGACCTGGAAAGCAGAAGGGGTGCCATGCA‑GGccccttctgctttccag > 2:1135341‑M2/1‑104 (MQ=255) ttGCGCCGGCCTCTTCGCGGGCTTGCCCGTTCCCACAGGTTACGTGCTTGTTTCAGGGCTGTGGCGATCCTGGACCTGGAAAGCAGAAGGGGTGCCATGCA‑GGccccttctgctttccag < 1:1135341‑M2/121‑18 (MQ=255) gcCGGCCTCTTCGCGGGCTTGCCCGTTCCCACAGGTTACATGCTTGTTTCAGGGCTGTGGCGATCCTGGACCTGGAAAGCAGAAGGGGT‑CC‑TGCATGGCACCCCTTCTGTTTGTCGCTTAGGCTTCAGCGTCCCAGGGACGATCGCCttt < 1:1369896/150‑1 (MQ=255) gcatctTCGCGGGCTTGCCCGTTCCCACAGGTTACGTGCTTGTTTCAGGGCTGTGGCGATCCTGGACCTGGAAATTTGAAGACGT‑CC‑TGAACAGCAACCCGACTGGATGTGTCTTAGGCTTCAGCGTCCCAGGGCCGATCGCCTTTTTCa > 1:543112/4‑150 (MQ=255) gCCTCTTCGCGGGCTTGCCCGTTCCCACAGGTTACGTGCTTGTTTCAGGGCTGTGGCGATCCTGGACCTGGAAAGCAGAAGGGGT‑CC‑TGCATGGCACCCCTTCTGTTTGTCGCTTAGGCTTCAGCGTCCCAGGGACGATCGCCTTTTTCa < 1:1514391/150‑1 (MQ=255) ccTCTTCGCGGGCTTGCCCGTTCCCACAGGTTACGTGCTTGTTTCAGGGCTGTGGCGATCCTGGACCTGGAAAGCAGAAGGGGT‑CC‑TGCATGGCACCCCTTCTGTTTGTCGCTTAGGCTTCAGCGTCCCAGGGACGATCGCCTTTTTCAt < 2:1659014/150‑1 (MQ=255) ctctTCGCGGGCTTGCCCGTTCCCACAGGTTACGTGCTTGTTTCAGGGCTGTGGCGATCCTGGACCTGGAAAGCAGAAGGGGTGCCATGCA‑GGccccttctgctttccaggtccag > 2:1748091‑M2/1‑94 (MQ=255) ctctTCGCGGGCTTGCCCGTTCCCACAGGTTACGTGCTTGTTTCAGGGCTGTGGCGATCCTGGACCTGGAAAGCAGAAGGGGTGCCATGCA‑GGccccttctgctttccaggtccag < 1:1748091‑M2/117‑24 (MQ=255) ctctTCGCGGGCTTGCCCGTTCCCACAGGTTACGTGCTTGTTTCAGGGCTGTGGCGATCCTGGACCTGGAAAGCAGAAGGGGT‑CC‑TGCATGGCACCCCTTCTGTTTGTCGCTTAGGCTTCAGCGTCCCAGGGACGATCGCCTTTTTAAtt > 1:338461/1‑149 (MQ=255) tctTCGCGGGCTTGCCCGTTCCCACAGGTTACGTGCTTGTTTCAGGGCTGTGGCGATCCTGGACCTGGAAAGCAGAAGGGGT‑CC‑TGCATGGCACCCCTTCTGTTTGTCGCTTAGGCTTCAGCGTCCCAGGGACGATCGCCTTTTTCATCt > 2:255373/1‑150 (MQ=255) gggCTTGCCCGTTCCCACAGGTTACGTGCTTGTTTCAGGGCTGTGGCGATCCTGGACCTGGAAAGCAGAAGGGGT‑CC‑TGCATGGCACCCCTTCTGTTTGTCGCTTAGGCTTCAGCGTCCCAGGGACGATCGCCTTTTTCATCTTTGAcgc < 2:677562/150‑1 (MQ=255) gCTTGCCCGTTCCCCCAGGTTACGTGCTTGTTTCAGGGCTGTGGCGATCCTGGACCTGGAAAGCAGAAGGGGT‑CC‑TGCATGGCACCCCTTCTGTTTGTCGCTTAGGCTTCAGCGTCCCAGGGACGATCGCCTTTTTCATCTTTGACGCgg < 2:345452/150‑1 (MQ=255) gCTTGCCCGTTCCCACAGGTTACGTGCTTGTTTCAGGGCTGTGGCGATCCTGGACCTGGAAAGCAGAAGGGGT‑CC‑TGCATGGCACCCCTTCTGTTTGTCGCTTAGGCTTCAGCGTCCCAGGGACGATCGCCTTTTTCATCTTTGACGCgg > 2:591917/1‑150 (MQ=255) gCTTGCCCGTTCCCACAGGTTACGTGCTTGTTTCAGGGCTGTGGCGATCCTGGACCTGGAAAGCAGAAGGGGT‑CC‑TGCATGGCACCCCTTCTGTTTGTCGCTTAGGCTTCAGCGTCCCAGGGACGATCGCCTTTTTCATCTTTGACGCgg < 1:1392622/150‑1 (MQ=255) gCTTGCCCGTTCCCACAGGTTACGTGCTTGTTTCAGGGCTGGGGCGATCCTGGACCTGGAAAGCAGAAGGGGT‑CC‑TGCATGGCACCCCTTCTGTTTGTCGCTTAGGCTGCAGCGTCCCAGGGACGATCGCCTTTTTCATCTTTGACGCgg < 1:1757985/150‑1 (MQ=255) cTTGCCCGTTCCCACAGGTTACGTGCTTGTTTCAGGGCTGTGGCGATCCTGGACCTGGAAAGCAGAAGGGGT‑CC‑TGCATGGCACCCCTTCTGTTTGTCGCTTAGGCTTCAGCGTCCCAGGGACGATCGCCTTTTTCATCTTTGACGCggg > 2:683624/1‑150 (MQ=255) ttGCCCGTTCCCACAGGTTACGTGCTTGTTTCAGGGCTGTGGCGATCCTGGACCTGGAAAGCAGAAGGGGT‑CC‑TGCATGGCACCCCTTCTGTTTGTCGCTTAGGCTTCa > 1:342058/1‑109 (MQ=255) ttGCCCGTTCCCACAGGTTACGTGCTTGTTTCAGGGCTGTGGCGATCCTGGACCTGGAAAGCAGAAGGGGT‑CC‑TGCATGGCACCCCTTCTGTTTGTCGCTTAGGCTTCa < 2:342058/109‑1 (MQ=255) ttGCCCGTTCCCACAGGTTACGTGCTTGTTTCAGGGCTGTGGCGATCCTGGACCTGGAAAGCAGAAGGGGT‑CC‑TGCATGGCACCCCTTCTGTTTGTCGCTTAGGCTTCAGCTTCCCAGGGACGATCGCCTTTTTCATCTTTGACGCGGGt > 1:1600551/1‑150 (MQ=255) ttGCCCGTTCCCACAGGTTACGTGCTTGTTTCAGGGCTGTGGCGATCCTGGACCTGGAAAGCAGAAGGGGT‑CC‑TGCATGGCACCCCTTCTGTTTGTCGCTTAGGCTTCAGCGTCCCAGGGACGATCGCCTTTTTCATCTTTGACGCGGGt > 2:627031/1‑150 (MQ=255) gCCCGTTCCCACAGGTTACGTGCTTGTTTCAGGGCTGTGGCGATCCTGGACCTGGAAAGCAGAAGGGGT‑CC‑TGCATGGCACCCCTTCTGTTTGTCGCTTAGGCTTCAGCGTCCCAGGGACGATCGCCTTTTTCATCTTTGACGCGGGTCg > 1:1240652/1‑150 (MQ=255) ccGTTCCCACAGGTTACGTGCTTGTTTCAGGGCTGTGGCGATCCTGGACCTGGAAAGCAGAAGGGGT‑CC‑TGCATGGCACCCCTTCTGTTTGTCGCTTAGGCTTc > 2:2159849/1‑104 (MQ=255) ccGTTCCCACAGGTTACGTGCTTGTTTCAGGGCTGTGGCGATCCTGGACCTGGAAAGCAGAAGGGGT‑CC‑TGCATGGCACCCCTTCTGTTTGTCGCTTAGGCTTc < 1:2159849/104‑1 (MQ=255) ccGTTCCCACAGGTTACGTGCTTGTTTCAGGGCTGTGGCGATCCTGGACCTGGAAAGCAGAAGGGGT‑CC‑TGCATGGCACCCCTTCTGTTTGTCGCTTAGGCTTCAGCGTCCCAGGGACGATCGCCTCTTTCATCTTTGACGCGGGTCGGc > 1:1844186/1‑150 (MQ=255) cGTTCCCACAGGTTACGTGCTTGTTTCAGGGCTGTGGCGATCCTGGACCTGGAAAGCAGAAGGGGT‑CC‑t > 1:425937/1‑69 (MQ=255) cGTTCCCACAGGTTACGTGCTTGTTTCAGGGCTGTGGCGATCCTGGACCTGGAAAGCAGAAGGGGT‑CC‑t < 2:425937/69‑1 (MQ=255) gTTCCCACAGGTTACGTGCTTGTTTCAGGGCTGTGGCGATCCTGGACCTGGAAAGCAGAAGGGGT‑CC‑TGCATGGCACCCCTTCTGTTTGTCGCTTAGGCTTCAGCGTCCCAGGGACGATCGCCTTTTTCATCTTTGACGCGGGTCGGCAg > 1:1890476/1‑150 (MQ=255) cacaGGTTACGTGCTTGTTTCAGGGCTGTGGCGATCCTGGACCTGGAAAGCAGAAGGGGT‑CC‑TGCATGGCACCCCTTCTGTTTGTCGCTTAGGCTTCAGCGTCCCAGGGACGATCGCCTTTTTCATCTTTGACGCGGGTCGGCAGGCCCa > 2:822735/1‑150 (MQ=255) cacaGGTTACGTGCTTGTTTCAGGGCTGTGGCGATCCTGGACCTGGAAAGCAGAAGGGGT‑CC‑TGCATGGCACCCCTTCTGTTTGTCGCTTAGGCTTCAGCGTCCCAGGGACGATCGCCTTTTTCATCTTTGACGCGGGTCGGCAGGCCCa > 1:525080/1‑150 (MQ=255) acaGGTTACGTGCTTGTTTCAGGGCTGTGGCGATCCTGGACCTGGAAAGCAGAAGGGGT‑CC‑TGCATGGCACCCCTTCTGTTTGTCGCTTAGGCTTCAGCGTCCCAGGGACGATCGCCTTTTTCATCTTTGACGCGGGTCGGCAGGCCCAt < 1:187695/150‑1 (MQ=255) gTTACGTGCTTGTTTCAGGGCTGTGGCGATCCTGGACCTGGAAAGCAGAAGGGGT‑CC‑TGCATGGCACCCCTTCTGTTTGTCGCTTAGGCTTCAGCGTCCCAGGGACGATCGCCTTTTTCATCTTTGACGCGGGTCGGCAGGCCCATCACg > 2:1417519/1‑150 (MQ=255) ttACGTGCTTGTTTCAGGGCTGTGGCGATCCTGGACCTGGAAAGAAGAAGGGGT‑CC‑TGCATGGCACCCCTTCTGTTTGTCGCTTAGGCTTCAGAGTCCCAGGGACGATAGCCTTTTTCATCTTTGACGCGGGTCGGCAGGCCCATCACGt > 1:398889/1‑150 (MQ=255) cGTGCTTGTTTCAGGGCTGTGGCGATCCTGGACCTGGAAAGCAGAAGGGGT‑CC‑TGCATGGCACCCCTTCTGTTTGTCGCTTAGGCTTCAGCGTCCCAGGGACGATCGCCTTTTTCATCTTTGACGCGGGTCGGCAGGCCCATCACGTCCa < 1:822735/150‑1 (MQ=255) gTGCTTGTTTCAGGGCTGTGGCGATCCTGGACCTGGAAAGCAGAAGGGGT‑CC‑TGCATGGCACCCCTTCTGTTTGTCGCTTAGGCTTCAGCGTCCCAGGGACGATCGCCTTTTTCATCTTTGACGCGGGTCGGCAGGCCCATCACGTCCAg < 2:281614/150‑1 (MQ=255) tGCTTGTTTCAGGGCTGTGGCGATCCTGGACCTGGAAAGCAGAAGGGGT‑CC‑TGCATGGCACCCCTTCTGTTTGTCGCTTAGGCTTCAGCGTCCCAGGGACGATCGCCTTTTTCATCTTTGCCGCGGGTCGGCAGGCCCATCACGTCCatc < 1:92138/150‑3 (MQ=255) gCTTGTTTCAGGGCTGTGGCGATCCTGGACCTGGAAAGCAGAAGGGGT‑CC‑TGCATGGCACCCCTTCTGTTTGTCGCTTAGGCTTc < 2:1379874/85‑1 (MQ=255) gCTTGTTTCAGGGCTGTGGCGATCCTGGACCTGGAAAGCAGAAGGGGT‑CC‑TGCATGGCACCCCTTCTGTTTGTCGCTTAGGCTTc > 1:1379874/1‑85 (MQ=255) ttGTTTCAGGGCTGTGGCGATCCTGGACCTGGAAAGCAGAAGGGGT‑CC‑TGCATGGCACCCCTTCTGTTTGTCGCTTAGGCTTCAGCGTCCCAGGGACGATCGCCTTTTTCATCTTTGACGCGGGTCGGCAGGCCCATCACGTCCAGCGcc > 1:81452/1‑150 (MQ=255) ttGTTTCAGGGCTGTGGCGATCCTGGACCTGGAAAGCAGAAGGGGT‑CC‑TGCATGGCACCCCTTCTGTTTGTCGATTCGGCTTCAGCGTCCCATTGACGATCGCCTTTTTCATCTTTGACGCGGGTCGGCAGGCCCATCACGTCCAGCGcc < 1:2099449/150‑1 (MQ=255) gTTTCAGGGCTGTGGCGATCCTGGACCTGGAAAGCAGAAGGGGT‑CC‑TGCATGGCACCCCTTCTGTTTGTCGCTTAGGCTTCAGCGTCCCAGGGACGATCGCCTTTTTCATCTTTGACGCGGGTCGGCAGGCCCATCACGTCCAGCGCCtt > 2:1701591/1‑150 (MQ=255) ttCAGGGCTGTGGCGATCCTGGACCTGGAAAGCAGAAGGGGT‑CC‑TGCATGGCACCCCTTCTGTTTGTCGCTTAGGCTTCAGCGTCCCAGGGACGATCGCCTTTTTCATCTTTGACGCGGGTCGGCAGGCCCATCACGTCCAGCGCCTTGa < 1:1701591/150‑1 (MQ=255) ttCAGGGCTGTGGCGATCCTGGACCTGGAAAGCAGAAGGGGT‑CC‑TGCATGGCACCCCTTCTGTTTGTCGCTTAGGCTTCAGCGTCCCAGGGACGATCGCCTTTTTCATCTTTGACGCGGGTCGGCAGGCCCATCACGTCCAGCGCCTTGa < 1:255373/150‑1 (MQ=255) gCTGTGGCGATCCTGGACCTGGAAAGCAGAAGGGGT‑CC‑TGCATGGCACCCCTTCTGTTTGTCGCTTAGGCTTCAGCGTCCCAGGGACGATCGCCTTTTTCATCTTTGACGCGGGTCGGCAGGCCCATCACGTCCAGCGCCTTGAGGAAcg < 2:1292731/150‑1 (MQ=255) gCGATCCTGGACCTGGAAAGCAGAAGGGGT‑CC‑TGCATGGCACCCCTTCTGTTTGTCGCTTAGGCTTCAGCGTCCCAGGGACGATCGCCTTTTTCATCTTTGACGCGGGTCGGCAGGCCCATCACGTCCAGCGCCTTGAGGAAcggctcgg > 1:1057461/1‑150 (MQ=255) gATCCTGGACCTGGAAAGCAGAAGGGGT‑CC‑TGCATGGCACCCCTTCTGTTTGTCGCTTAGGCTTCAGCGTCCCAGGGACGATCGCCTTTTTCATCTTTGACGCGGGTCGGCAGGCCCATCACGTCCAGCGCCTTGAGGAAcgtctcggct < 1:1417519/150‑1 (MQ=255) aTCCTGGACCTGGAAAGCAGAAGGGGT‑CC‑TGCATGGCACCCCTTCTGTTTGTCGCTTAGGCTTCAGCGTCCCAGGGACGATCGCCTTTTTCATCTTTGACGCGGGTCGGCAGGCCCATCACGTCCAGCGCCTTGAGGAACGGCTCGGCTg > 1:1410553/1‑150 (MQ=255) aTCCTGGACCTGGAAAGCAGAAGGGGT‑CC‑TGCATGGCACCCCTTCTGTTTGTCGCTTAGGCTTCAGCGTCCCAGGGACGATCGCCTTTTTCATCTTTGACGCGGGTCGGCAGGCCCATCACGTCCAGCGCCTTGAGGAACGGCTCGGCTg < 1:627031/150‑1 (MQ=255) ggacctggaAAGCAGAAGGGGT‑CC‑TGCATGGCACCCCTTCTGTTTGTCGCTTAGGCTTCAGCGTCCCAGGGACGATCGCCTTTTTCATCTTTGACGCGGGTCGGCAGGCCCATCACGTCCAGCGCCTTGAGGAACGGCTCGGCTGGCAGc < 1:545996/150‑1 (MQ=255) gcctggaAAGCAGAAGGGGT‑CC‑TGCATGGCACCCCTTCTGTTGGTCGCTTAGGGTTCAGCGTCCCAGGGACGATCGCCTTTTTCATCTTTGACGCGGGTCGGCAGGCCCATCACGTCCAGCGCCTTGAGGAACGGCTCGGGTGGCAGctc > 1:1762980/2‑150 (MQ=255) ctggaAAGCAGAAGGGGT‑CC‑TGCATGGCACCCCTTCTGTTTGTCGCTTAGGCTTCAGCGTCCCAGGGACGATCGCCTTTTTCATCTTTGACGCGGGTCGGCAGGCCCATCACGTCCAGCGcc > 1:2378061/1‑122 (MQ=255) ctggaAAGCAGAAGGGGT‑CC‑TGCATGGCACCCCTTCTGTTTGTCGCTTAGGCTTCAGCGTCCCAGGGACGATCGCCTTTTTCATCTTTGACGCGGGTCGGCAGGCCCATCACGTCCAGCGcc < 2:2378061/122‑1 (MQ=255) aaaaGCAGGAGGGGT‑CC‑GGCATGGCGCCCCTGCTGTGTGTCGCTTAGGCTTCAGCGTCCCAGGGACGGGCGCCTTTTTCATCTTTGACGCGGGGGGGGAGGCGCATCACGTCCAGCGCCTTGAGGAACGGCTCGGCGGGCAGCTCCTCGa < 2:197600/149‑1 (MQ=255) aaaGCAGAAGGGGT‑CC‑TGCATGGCACCCCTTCTGTTTGTCGCTTAGGCTTCAGCGTCCCAGGGACGATCGCCTTTTTCATCTTTGACGCGGGTCGGCAGGCCCATCACGTCCAGCGCCTTGAGGAACGGCTCGGCTGGCAGCTCCTCGAc < 1:1974161/150‑1 (MQ=255) aaGCAGAAGGGGT‑CC‑TGCATGGCACCCCTTCTGTTTGTCGCTTAGGCTTCAGCGTCCCAGGGACGATCGCCTTTTTCATCTTTGACGCGGGTCGGCAGGCCCATCACGTCCAGCGCCTTGAGGAACGGCTCGGCTGGCAGCTCCTCGatg > 2:623018/1‑148 (MQ=255) gccgcaagggT‑CC‑TCCATGGCCCCCCTTCTGTTTATTTCTAAGGCTTCACCGTCCCAGAGACGATCGCCTTTTTCATCTTTGACGCGGGTAAACAGAACCGTCACGTCCAGCGCCTTGGGGAACGGCTCGGCTGGCAGCTCCTCGACGtt < 2:338461/143‑1 (MQ=255) gCAGAAGGGGT‑CC‑TGCATGGCACCCCTTCTGTTTGTCGCTTAGGCTTCAGCGTCCCAGGGACGATCGCCTTTTTCATCTTTGACGCGGGTCGGCAGGCCCATCACGTCCAGCGCCTTGAGGAACGGCTCGGCTGGCAGCTCCTCGACGtt < 2:1410553/150‑1 (MQ=255) gCAGAAGGGGT‑CC‑TGCATGGCACCCCTTCTGTTTGTCGCTTAGGCTTCAGCGTCCCAGGGACGATCGCCTTTTTCATCTTTGACGCGGGTCGGCAGGCCCATCACGTCCAGCGCCTTGAGGAACGGCTCGGCTGGCAGCTCCTCGACGtt < 2:1321105/150‑1 (MQ=255) aGAAGGGGT‑CC‑TGCATGGCaccccttctgctttccaggtccaggatcgccacagccctgaaacaagcacgtaacctgtgggaacgggcaagcccgcgaagaggccggcgcaagatcacgctctacttgcgggcctccagaatcaggttga < 1:832228‑M2/150‑132 (MQ=255) aGAAGGGGT‑CC‑TGCATGGCACCCCTTCTGTTTGTCGCTTAGGCTTCAGCGTCCCAGGGACGATCGCCTTTTTCATCTTTGACGCGGGTCGGCAGGCCCATCACGTCCAGCGCCTTGAGGAACGGCTCGGCTGGCAGATCCTCGAccctga > 2:1587110/1‑145 (MQ=255) gAAGGGGT‑CC‑TGCATGGCaccccttctgctttccaggtccaggatcgccacagccctgaaacaagcacgtaacctgtgggaacgggcaagcccgcgaagaggccggcgcaagatcacgctctacttgcgggcctccagaatcaggttgaa < 1:2263481‑M2/150‑133 (MQ=255) gAAGGGGT‑CC‑TGCATGGCaccccttctgctttccaggtccaggatcgccacagccctgaaacaagc > 1:1783745‑M2/1‑18 (MQ=255) gAAGGGGT‑CC‑TGCATGGCaccccttctgctttccaggtccaggatcgccacagccctgaaacaagc < 2:1783745‑M2/66‑49 (MQ=255) aGGGGT‑CC‑TGCATGGCACCCCTTCTGTTTGTCGCTTAGGCTTCAGCGTCCCAGGGACGATCGCCTTTTTCATCTTTGACGCGGGTCGGCAGGCCCATCACGTCCAGCGCCTTGAGGAACGGCTCGGCTGGCAGCTCCTCGACGTTGACCa < 2:81452/150‑1 (MQ=255) ggggT‑CC‑TGCATGGCACCCCTTCTGTTTGTCGCTTAGGCTTCAGCGTCCCAGGGACGATCGCCTTTTTCATCTTTGACGCGGGTCGGCAGGCCCATCACGTCCAGCGCCTTGAGGAACGGCTCGGCTGGCAGCTCCTCGACGTTGACCAt > 2:1578351/1‑150 (MQ=255) ggT‑CC‑TGCATGGCACCCCTTCTGTTTGTCGCTTAGGCTTCAGCGTCCCAGGGACGATCGCCTTTTTCATCTTTGACGCGGGTCGGCAGGCCCATCACGTCCAGCGCCTTGAGGAACGGCTCGGCTGGCAGCTCCTCGACGTTGa < 2:850070/144‑1 (MQ=255) ggT‑CC‑TGCATGGCACCCCTTCTGTTTGTCGCTTAGGCTTCAGCGTCCCAGGGACGATCGCCTTTTTCATCTTTGACGCGGGTCGGCAGGCCCATCACGTCCAGCGCCTTGAGGAACGGCTCGGCTGGCAGCTCCTCGACGTTGa > 1:850070/1‑144 (MQ=255) ggT‑CC‑TGCATGGCACCCCTTCTGTTTGTCGCTTAGGCTTCAGCGCCCCAGGGACGATCGCCTTTTTCATCTTTGACGCGGGTCGGCAGGCCCATCACGTCCAGCGCCTTGAGGAACGGCTCGGCTGGCAGCTCCTCGACGTTGACCATgc > 2:233083/1‑150 (MQ=255) gT‑CC‑TGCATGGCACCCCTTCTGTTTGTCGCTTAGGCTTCAGCGTCCCAGGGACGATCGCCTTTTTCATCTTTGACGCGGGTCGGCAGGCCCATCACGTCCAGCGCCTTGAGGAACGGCTCGGCTGGCAGCTCCTCGACGTTGACCATgcg > 2:1082242/1‑150 (MQ=255) t‑CC‑TGCATGGCACCCCTTCTGTTTGTCGCTTAGGCTTCAGCGTCCCAGGGACGATCGCCTTTTTCATCTTTGACGCGGGTCGGCAGGCCCATCACGTCCAGCGCCTTGAGGAACGGCTCGGCTGGCAGCTCCTCGACGTTGACCATgcgc > 2:1781666/1‑150 (MQ=255) t‑CC‑TGCATGGCACCCCTTCTGTTTGTCGCTTAGGCTTCAGCGTCCCAGGGACGATCGCCTTTTTCATCTTTGACGCGGGTCGGCAGGCCCATCACGTCCAGCGCCTTGAGGAACGGCTCGGCTGGCAGCTCCTCGACGTTGACCATgcgc < 1:2232801/150‑1 (MQ=255) c‑TGCATGGCACCCCTTCTGTTTGTCGCTTAGGCTTCAGCGTCCCAGGGACGATCGCCTTTTTCATCTTTGACGCGGGTCGGCAGGCCCATCACGTCCAGCGCCTTGAGGAACGGCTCGGCTGGCAGCTCCTCGACGTTGACCATGCGCtt > 2:2155913/1‑150 (MQ=255) c‑TGCATGGCACCCCTTCTGTTTGTCGCTTAGGCTTCAGCGTCCCAGGGACGATCGCCTCTTTCATCTTTGACGCGGGTCGGCAGGCCCATCACGTCCAGCGCCTTGAGGAACGGCTCGGCTGGCAGCTCCTCGCCGTTGACCATGCGCtt < 2:1844186/150‑1 (MQ=255) | CGCAGACGCCGTTCAACCTGATTCTGGAGGCCCGCAAGTAGAGCGTGATCTTGCGCCGGCCTCTTCGCGGGCTTGCCCGTTCCCACAGGTTACGTGCTTGTTTCAGGGCTGTGGCGATCCTGGACCTGGAAAGCAGAAGGGGT‑CC‑TGCATGGCACCCCTTCTGTTTGTCGCTTAGGCTTCAGCGTCCCAGGGACGATCGCCTTTTTCATCTTTGACGCGGGTCGGCAGGCCCATCACGTCCAGCGCCTTGAGGAACGGCTCGGCTGGCAGCTCCTCGACGTTGACCATGCGCTT > NC_002947/3329499‑3329792 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |