| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 3,340,622:1 | +A | 9.4% | coding (249/1587 nt) | ybiT ← | ABC‑F family ATPase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 3,340,622 | 1 | . | A | 9.4% | 315.3 / 27.9 | 85 | coding (249/1587 nt) | ybiT | ABC‑F family ATPase |
| Reads supporting (aligned to +/- strand): ref base . (36/41); new base A (3/5); total (39/46) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.21e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.29e-01 | |||||||||||
CTCGGCGGTGTAGCCGTCCATTTCGGCGAATTCGGTTTCCAGCTCGGCGACGGCCATGCCGTCTTCTTCGGTCATTTCCGGCAGCGAGTAGATACGGTCACGCTCGGCTTTGACTTTCCACAGCTGGCCGTGGCCCATGATCACCGTG‑TCGATCACGGTGAATTCCTCGTAGGCGAACTGGTCCTGGCGCAGCTTGCCCAGGCGGGTATTCGGCTCGAGCATGACCTGGCCTGCGGACGGCTCCAGGTCACCGCCGAGGATTTTCATGAAGGTCGACTTGCCGCAACCGTTGGCGC > NC_002947/3340475‑3340770 | cTCGGCGGTGTAGCCGTCCATTTCGGCGAATTCGGTTTCCAGCTCGGCGACGGCCATGCCGTCTTCTTCGGTCATTTCCGGCAGCGAGTAGCTACGGTCACGCTATCTCTTGACTTTTCACTGCTGGCAGTGGCCCATGATCTGCGTG‑Tc < 2:27248/150‑1 (MQ=255)cTCGGCGGTGTAGCCGTCCATTTCGGCGAATTCGGTTTCCAGCTCGGCGACGGCCATGCCGTCTTCTTCGGTCATTTCCGGCAGCGAGTAGATACGGTCACGCTCGGCTTTGACTTTCCACAGCTGGCCGTGGCCCATGATCACCGTG‑Tc < 2:1392120/150‑1 (MQ=255) tCGGCGGTGTAGCCGTCCATTTCGGCGATTTCGGTTTCCAGCTCGGCGACGGCCATGCCGTCGTCTTCGGTCATTTCCGGCAGCGAGTAGATACGGTCACGCTCGGCTTTGACTTTCCACAGCTTGCCGTGGCCCATGATCACCGTG‑TCg > 1:676200/1‑150 (MQ=255) tCGGCGGTGTAGCCGTCCATTTCGGCGAATTCGGTTTCCAGCTCGGCGCGGGACGACGATTCTTCTTCGGTCATTTCCGGCAGCGAGTAGATACGGTCACGCTCGGCTTTGACTTTCCACAGCTGGCCGTGGCCCATGATCACCGTG‑TCg > 2:1791602/1‑150 (MQ=255) tCGGCGGTGTAGCCGTCCATTTCGGCGAATTCGGTTTCCAGCTCGGCGACGGCCATGCCGTCTTCTTCGGTCATTTCCGGCAGCGAGTAGATACGGTCACGCTCGGCTTTGCTGGCCCACAGCTGGCCGTGGCCCATGATCACCGTG‑TCg > 1:1330917/1‑150 (MQ=255) gtgtAGCCGTCCATTTCGGCGAATTCGGTTTCCAGCTCGGCGACGGCCATGCCGTCTTCTTCGGTCATTTCCGGCAGCGAGTAGATACGGTCACGCTCGGCTTTGACTTTCCACAGCTGGCCGTGGCCCATGATCACCGTG‑TCGATCACg > 2:947664/1‑150 (MQ=255) gtgtAGCCGTCCATTTCGGCGAATTCGGTTTCCAGCTCGGCGACGGCCATGCCGTCTTCTTCGGTCATTTCCGGCAGCGAGTAGATACGGTCACGCTCGGCTTTGACTTTCCACAGCTGGCCGTGGCCCATGATCACCGTG‑TCGATCACg < 1:630429/150‑1 (MQ=255) aGCCGTCCATTTCGGCGAATTCGGTTTCCAGCTCGGCGACGGCCATGCCGTCTTCTTCGGTCATTTCCGGCAGCGAGTAGATACGGTCACGCTCGGCTTTGACTTTCCACAGCTGGCCGTGGCCCATGATCACCGTGATCGA‑CACGGTGa < 1:283476/150‑1 (MQ=255) gTCCATTTCGGCGAATTCGGTTTCCAGCTCGGCGACGGCCATGCCGTCTTCTTCGGTCATTTCCGGCAGCGAGTAGATACGGTCACGCTCGGCTTTGACTTTCCACAGCTGGCCGTGGCCCATGATCACCGTGATCGA‑CACGGTGatcat < 1:2378913/150‑5 (MQ=255) gTCCATTTCGGCGAATTCGGTTTCCAGCTCGGCGACGGCCATGCCGTCTTCTTCGGTCATTTCCGGCAGCGAGTAGATACGGTCACGCTCGGCTTTGACTTTCCACAGCTGGCCGTGGCCCATGATCACCGTG‑TCGATCACGGTGAATTc < 2:2051856/150‑1 (MQ=255) cATTTCGGCGAATTCGGTTTCCAGCTCGGCGACGGCCATGCCGTCTTCTTCGGTCATTTCCGGCAGCGAGTAGATACGGTCACGCTCGGCTTTGACTTTCCATATCTGTCCGTTGCCCATGATCACCGTG‑TCGATCACGGTGAATTCCTc < 1:2226054/150‑1 (MQ=255) tttCGGCGAATTCGGTTTCCAGCTCGGCGACGGCCATGCCGTCTTCTTCGGTCATTTCCGGCAGCGAGTAGATACGGTCACGCTCGGCTTTGACTTTCCACAGCTGGCCGTGGCCCATGATCACCGTG‑TCGATCACGGTGAATTCCTCGt < 1:412206/150‑1 (MQ=255) tCGGCGAATTCGGTTTCCAGCTCGGCGACGGCCATGCCGTCTTCTTCGGTCATTTCCGGCAGCGAGTAGATACGGTCACGCTCGGCTTTGACTTTCCACAGCTGGCCGTGGCCCATGATCACCGTG‑TCGATCACGGTGAATTCCTCGTAg < 2:2151510/150‑1 (MQ=255) ggCGAATTCGGTTTCCAGCTCGGCGACGGCCATGCCGTCTTCTTCGGTCATTTCCGGCAGCGAGTAGATACGGTCACGCTCGGCTTTGACTTTCCACAGCTGGCCGTGGCCCATGATCACCGTG‑TCGATCACGGTGAATTCCTCGTAGGc > 2:836459/1‑150 (MQ=255) gCGAATTCGGTTTCCAGCTCGGCGACGGCCATGCCGTCTTCTTCGGTCATTTCCGGCAGCGAGTAGATACGGTCACGCTCGGCTTTGACTTTCCACAGCTGGCCGTGGCCCATGATCACCGTGATCGA‑CACGGTGa > 2:2163255/1‑136 (MQ=255) gCGAATTCGGTTTCCAGCTCGGCGACGGCCATGCCGTCTTCTTCGGTCATTTCCGGCAGCGAGTAGATACGGTCACGCTCGGCTTTGACTTTCCACAGCTGGCCGTGGCCCATGATCACCGTGATCGA‑CACGGTGa < 1:2163255/136‑1 (MQ=255) aTTCGGTTTCCAGCTCGGCGACGGCCATGCCGTCTTCTTCGGTCATTTCCGGCAGCGAGTAGATACGGTCACGCTCGGCTTTGACTTTCCACAGCTGGCCGTGGCCCATGATCACCGTG‑TCGATCACGGTGAATTCCTCGTAGGCGAACt > 2:2224555/1‑150 (MQ=255) ttCGGTTTCCAGCTCGGCGACGGCCATGCCGTCTTCTTCGGTCATTTCCGGCAGCGAGTAGATACGGTCACGCTCGGCTTTGACTTTCCACAGCTGGCCGTGGCCCATGATCACCGTG‑TCGATCACGGTGAATTCCTCGTAGGCGAACTg > 2:316885/1‑150 (MQ=255) ttCGGTTTCCAGCTCGGCGACGGCCATGCCGTCTTCTTCGGTCATTTCCGGCAGCGAGTAGATACGGTCACGCTCGGCTTTGACTTTCCACAGCTGGCCGTGGCCCATGATCACCGTG‑TCGATCACGGTGAATTCCTCGTAGGCGAACTg > 1:446712/1‑150 (MQ=255) ttCGGTTTCCAGCTCGGCGACGGCCATGCCGTCTTCTCAGGAACTTGCCGGCCGACAGCAGCTGCGGTCACGCTCGGCTTTGACTTTCCACAGCTCGCCGTGGCCCATGCTCACCGTC‑CCGATCACGGTGAATTCCTCGTAGGCGACCTg > 2:84301/1‑150 (MQ=255) gTTTCCAGCTCGGCGACGGCCATGCCGTCTTCTTCGGTCATTTCCGGCAGCGAGTAGATACGGTCACGCTCGGCTTTGACTTTCCACAGCTGGCCGTGGCCCATGATCACCGTG‑TCGATCACGGTGAATTCCTCGTAGGCGAACTg > 1:849166/1‑146 (MQ=255) gTTTCCAGCTCGGCGACGGCCATGCCGTCTTCTTCGGTCATTTCCGGCAGCGAGTAGATACGGTCACGCTCGGCTTTGACTTTCCACAGCTGGCCGTGGCCCATGATCACCGTG‑TCGATCACGGTGAATTCCTCGTAGGCGAACTg < 2:849166/146‑1 (MQ=255) tCCAGCTCGGCGACGGCCATGCCGTCTTCTTCGGTCATTTCCGGCAGCGAGTAGATACGGTCACGCTCGGCTTTGACTTTCCACAGCTGGCCGTGGCCCATGATCACCGTG‑TCGATCACGGTGAATTCCTCGTAGGCGAACTGGTCCTgg < 1:1593830/150‑1 (MQ=255) tCGGCGACGGCCATGCCGTCTTCTTCGGTCATTTCCGGCAGCGAGTAGATACGGTCACGCTCGGCTTTGACTTTCCACAGCTGGCCGTGGCCCATGATCACCGTG‑TCGATCACGGTGAATTCCt < 1:1537486/124‑1 (MQ=255) tCGGCGACGGCCATGCCGTCTTCTTCGGTCATTTCCGGCAGCGAGTAGATACGGTCACGCTCGGCTTTGACTTTCCACAGCTGGCCGTGGCCCATGATCACCGTG‑TCGATCACGGTGAATTCCt > 2:1537486/1‑124 (MQ=255) aCGGCCATGCCGTCTTCTTCGGTCATTTCCGGCAGCGAGTAGATACGGTCACGCTCGGCTTTGACTTTCCACAGCTGGCCGTGGCCCATGATCACCGTG‑TCGATCACGGTGAATTCCTc > 1:221185/1‑119 (MQ=255) aCGGCCATGCCGTCTTCTTCGGTCATTTCCGGCAGCGAGTAGATACGGTCACGCTCGGCTTTGACTTTCCACAGCTGGCCGTGGCCCATGATCACCGTG‑TCGATCACGGTGAATTCCTc < 2:221185/119‑1 (MQ=255) tggCCGTCTTCTTCGGTCATTTCCGGCAGCGAGTAGATACGGTCACGCTCGGCTTTGACTTTCCACAGCTGGCCGTGGCCCATGATCACCGTG‑TCGATCACGGTGAATTCCTCGTAGGCGAACTGGTCCTGGCGCAGCTTGCCCAGGCgg < 2:1873413/148‑1 (MQ=255) aTGCCGTCTTCTTCGGTCATTTCCGGCAGCGAGTAGATACGGTCACGCTCGGCTTTGACTTTCCTCCCCATGCCGTGGCCCATGATCACCGTG‑TCGATCACGGTGAATTCCTCGTAGGCGAACTGGTCCTGGCGCAGCTTGCCCAGGCgg < 1:1620153/150‑1 (MQ=255) aTGCCGTCTTCTTCGGTCATTTCCGGCAGCGAGTAGATACGGTCACGCTCGGCTTTGACTTTCCACAGCTGGCCGTGGCCCATGATCACCGTG‑TCGATCACg < 1:2336243/102‑1 (MQ=255) aTGCCGTCTTCTTCGGTCATTTCCGGCAGCGAGTAGATACGGTCACGCTCGGCTTTGACTTTCCACAGCTGGCCGTGGCCCATGATCACCGTG‑TCGATCACg > 2:2336243/1‑102 (MQ=255) tcttctTCGGTCATTTCCGGCAGCGAGTAGATACGGTCACGCTCGGCTTTGACTTTCCACAGCTGGCCGTGGCCCATGATCACCGTG‑TCGa < 2:1980006/91‑1 (MQ=255) tcttctTCGGTCATTTCCGGCAGCGAGTAGATACGGTCACGCTCGGCTTTGACTTTCCACAGCTGGCCGTGGCCCATGATCACCGTG‑TCGa > 1:1980006/1‑91 (MQ=255) ttcGGTCATTTCCGGCAGCGAGTAGATACGGTCACGCTCGGCTTTGACTTTCCACAGCTGGCCGTGGCCCATGATCACCGTG‑TCGATCACGGTGAATTCCTCGTAGGCGAACTGGTCCTGGCGCAGCTTGCCCAGGCGGGTATTCGGCTc > 1:520738/1‑150 (MQ=255) ggTCATTTCCGGCAGCGAGTAGATACGGTCACGCTCGGCTTTGACTTTCCACAGCTGGCCGTGGCCCATGATCACCGTG‑TCGATCACGGTGAATTCCTCGTAGGCGAACTGGTCCTGGCGCAGCTTGCCCAGGCGGGTATTCGGCTCGAg < 2:2340380/150‑1 (MQ=255) gTCATTTCCGGCAGCGAGTAGATACGGTCACGCTCGGCTTTGACTTTCCACAGCTGGCCGTGGCCCATGATCACCGTG‑TCGATCACGGTGAATTCCTCGTAg > 1:733886/1‑102 (MQ=255) gTCATTTCCGGCAGCGAGTAGATACGGTCACGCTCGGCTTTGACTTTCCACAGCTGGCCGTGGCCCATGATCACCGTG‑TCGATCACGGTGAATTCCTCGTAg < 2:733886/102‑1 (MQ=255) tCCGGCAGCGAGTAGATACGGTCACGCTCGGCTTTGACTTTCCACAGCTGGCCGTGGCCCATGATCACCGTG‑TCGATCACGGTGAATTCCTCGTAGGCGAACTGGTCCTGGCGCAGCTTGCCCAGGCGGGTATTCGGCTCGAGCATGAcc < 2:190843/150‑1 (MQ=255) ccGGCAGCGAGTAGATACGGTCACGCTCGGCTTTGACTTTCCACAGCTGGCCGTGGCCCATGATCACCGTG‑TCGATCACGGTGAATTCCTCGTAGGCGAACTGGTCCTGGCGCAGCTTGCCCAGGCGGGTATTCGGCTCGAGCATGACCt < 1:2282371/150‑1 (MQ=255) ggCAGCGAGTAGATACGGTCACGCTCGGCTTTGACTTTCCACAGCTGGCCGTGGCCCATGATCACCGTG‑TCGATCACGGTGAATTCCTCGTAGGCGAACTGGTCCTGGCGCAGCTTGCCCAGGCGGGTATTCGGCTCGAGCATGACCTgg > 1:1636088/1‑150 (MQ=255) gCAGCGAGTAGATACGGTCACGCTCGGCTTTGACTTTCCACAGCTGGCCGTGGCCCATGATCACCGTG‑TCGATCACGGTGAATTCCTCGTAGGCGAATGTGTCCTGGCGCAGCTTGCCCAGGCGGGTATTCGGCTCGAGCATGACCTGGc < 1:173583/150‑1 (MQ=255) aGCGAGTAGATACGGTCACGCTCGGCTTTGACTTTCCACAGCTGGCCGTGGCCCATGATCACCGTG‑TCGATCACGGTGAATTCCTCGTAGGCGAACTGGTCCTGGCGCAGCTTGCCCAGGCGGGTATTCGGCTCGAGCATGACCTGGCCt > 2:1887465/1‑150 (MQ=255) gAGTAGATACGGTCACGCTCGGCTTTGACTTTCCACAGCTGGCCGTGGCCCATGATCACCGTG‑TCGATCACGGt > 1:125/1‑74 (MQ=255) gAGTAGATACGGTCACGCTCGGCTTTGACTTTCCACAGCTGGCCGTGGCCCATGATCACCGTG‑TCGATCACGGt < 2:125/74‑1 (MQ=255) gAGTAGATACGGTCACGCTCGGCTTTGACTTTCCACAGCTGGCCGTGGCCCATGATCACCGTG‑TCGATCACGGTGAATTCCTCGTAGGCGAACTGGTCCTGGCGCAGCTTGCCCAGGCGGGTATTCGGCTCGAGCATGACCTGGCCTGCg < 1:947664/150‑1 (MQ=255) gTAGATACGGTCACGCTCGGCTTTGACTTTCCACAGCTGGCCGTGGCCCATGATCACCGTG‑TCGATCACGGTGAATTCCTCGTAGGCGAACTGGTCCTGGCGCAGCTTGCCCAGGCGGGTATTCGGCTCGAGCATGACCTGGCCTGCGGa < 1:1887465/150‑1 (MQ=255) gTAGATACGGTCACGCTCGGCTTTGACTTTCCACAGCTGGCCGTGGCCCATGATCACCGTG‑TCGATCACGGTGAATTCCTCGTAGGCGAACTGGTCCTGGCGCAGCTTGCCCAGGCGGGTATTCGGCTCGAGCATGACCTGGCCTGCGGa < 1:836459/150‑1 (MQ=255) gTAGATACGGTCACGCTCGGCTTTGACTTTCCACAGCTGGCCGTGGCCCATGATCACCGTG‑TCGATCACGGTGAATTCCTCGTAGGCGAACTGGTCCTGGCGCAGCTTGCCCAGGCGGGTACTCGGCTCGAGCATGACCTGGCCTGCGGa < 1:1647033/150‑1 (MQ=255) tAGATACGGTCACGTTCGGCTTTGACTTTCCACAGCTGGCCGTGGCCCATGATCACCGTG‑TCGATCACGGTGAATTCCTCTTAGGCGAACTGGTCCTGGCGCAGCTTGCCCAGGCGGGTATTCGGCTCGAGCATGACCTGGCCTGCGGAc < 2:82431/150‑1 (MQ=255) tAGATACGGTCACGCTCGGCTTTGACTTTCCACAGCTGGCCGTGGCCCATGATCACCGTG‑TCGATCACGGTGAATTCCTCGTAGGCGAACTGGTCCTGGCGCAGCTTGCCCAGGCGGGTATTCGGCTCGAGCATGACCTGGc > 2:1167065/1‑142 (MQ=255) tAGATACGGTCACGCTCGGCTTTGACTTTCCACAGCTGGCCGTGGCCCATGATCACCGTG‑TCGATCACGGTGAATTCCTCGTAGGCGAACTGGTCCTGGCGCAGCTTGCCCAGGCGGGTATTCGGCTCGAGCATGACCTGGc < 1:1167065/142‑1 (MQ=255) tAGATACGGTCACGCTCGGCTTTGACTTTCCACAGCTGGCCGTGGCCCATGATCACCGTG‑TCGATCACGGTGAATTCCTCGTAGGCGAACTGGTCCTGGCGCAGCTTGCCCAGGCGGGTATTCGGCTCGAGCATGACCTGGCCTGCGGAc > 2:2052371/1‑150 (MQ=255) tAGATACGGTCACGCTCGGCTTTGACTTTCCACAGCTGGCCGTGGCCCATGATCACCGTG‑TCGATCACGGTGAATTCCTCGTAGGCGAACTGGTCCTGGCGCAGCTTGCCCAGGCGGGTATTCGGCTCGAGCATGACCTGGCCTGCGGAc < 1:554510/150‑1 (MQ=255) gCTCGGCTTTGACTTTCCACAGCTGGCCGTGGCCCATGATCACCGTG‑TCGATCACGGTGAATTCCTCGTAGGCGAACTGGTCCTGGCGCAGCTTGCCCAGGCGGGTAtt > 2:1413859/1‑109 (MQ=255) gCTCGGCTTTGACTTTCCACAGCTGGCCGTGGCCCATGATCACCGTG‑TCGATCACGGTGAATTCCTCGTAGGCGAACTGGTCCTGGCGCAGCTTGCCCAGGCGGGTAtt < 1:1413859/109‑1 (MQ=255) gCTCGGCTTTGACTTTCCACAGCTGGCCGTGGCCCATGATCACCGTG‑TCGATCACGGTGAATTCCTCGTAGGCGAACTGGTCCTGGCGCAGCTTGCCCAGGCGGGTATTCGGCTCGAGCATGACCTGGCCTGCGGACGGCTCCAGGTCAc > 1:1206638/1‑150 (MQ=255) tCGGCTTTGACTTTCCACAGCTGGCCGTGGCCCATGATCACCGTG‑TCGATCACGGTGAATTCCTCGTAGGCGAACTGGTCCTGGCGCAGCTTGCCCAGGCGGGTATTCGGCTCGAGCATGACCTGGCCTGCGGACGGCTCCAGGTCAccg > 1:1607111/1‑150 (MQ=255) cTTTGACTTTCCACAGCTGGCCGTGGCCCATGATCACCGTG‑TCGATCACGGTGAATTCCTCGTAGGCGAACTGGTCCTGGCGCAGCTTGCCCAGGCGGGTATTCGGCTCGAGCATGACCTGGCCTGCGGACGGCTCCAGGTCACCGCCGa < 2:1867271/150‑1 (MQ=255) cTTTGACTTTCCACAGCTGGCCGTGGCCCATGATCACCGTG‑TCGATCACGGTGAATTCCTCGTAGGCGAACTGGTCCTGGCGCAGCTTGCCCAGGCGGGTATTCGGCTCGAGCATGACCTGGCCTGCGGACGGCTCCAGGTCACCGCCGa < 2:1165267/150‑1 (MQ=255) tttCCACAGCTGGCCGTGGCCCATGATCACCGTG‑TCGATCACGGTGAATTCCTCGTAGGCGAACTGGTCCTGGCGCAGCTTGCCCAGGCGGGTATTCGGCTCGAGCATGACCTGGCCTGCGGACGGCTCCAGGTCACCGCCGAGGAtttt > 1:2321120/1‑150 (MQ=255) tttCCACAGCTGGCCGTGGCCCATGATCACCGTG‑TCGATCACGGTGAATTCCTCGTAGGCGAACTGGTCCTGGCGCAGCTTGCCCAGGCGGGTATTCGGCTCGAGCATGACCTGGCCTGCGGACGGCTCCAGGTCACCGCCGAGGAtttt > 1:1787311/1‑150 (MQ=255) ttCCACAGCTGGCCGTGGCCCATGATCACCGTG‑TCGATCACGGTGAATTCCTCGTAGGCGAACTGGTCCTGGCGCAGCTTGCCCAGGCGGGTATTCGGCTCGAGCATGACCTGGCCTGCGGACGGCTCCAGGTCACCGCCGAGGATTTTc < 1:383043/150‑1 (MQ=255) ccACAGCTGGCCGTGGCCCATGATCACCGTG‑TCGATCACGGTGAATTCCTCGTAGGCGAACTGGTCCTGGCGCAGCTTGCCCAGGCGGGTATTCGGCTCGAGCATGACCTGGCCTGCGGACGGCTCCAGGTCACCGCCGAGGATTTTCAt < 1:2052371/150‑1 (MQ=255) acaGCTGGCCGTGGCCCATGATCACCGTG‑TCGATCACGGTGAATTCCTCGTAGGCGAACTGGTCCTGGCGCAGCTTGCCCAGGCGGGTATTCGGCTCGAGCATGACCTGGCCTGCGGACGGCTCCAGGTCACCGCCGAGGATTTTCATGa > 2:1809538/1‑150 (MQ=255) tGGCCGTGGCCCATGATCACCGTG‑TCGATCACGGTGAATTCCTCGTAGGCGAACTGGTCCTGGCGCAGCTTGCCCAGGAGGGTATTCGGCTCGAGCATGAGCTCGACTTGGGACTGCTCCAGGTCACCGCCGAGGATTTTCATGAAGGTc < 1:2224555/150‑1 (MQ=255) tGGCCCATGATCACCGTG‑TCGATCACGGTGAATTCCTCGTAGGCGAACTGGTCCTGGCGCAGCTTGCCCAGGCGGGTATTCGGCTCGAGCATGATCTGGCCTGCGGACGGCGCCAGGTCACCGCCGAGGATTTTCATGAAGGTCGACTTg < 2:446712/150‑1 (MQ=255) ccATGATCACCGTG‑TCGATCACGGTGAATTCCTCGTAGGCGAACTGGTCCTGGCGCAGCTTGCCCAGGCGGGTATTCGGCTCGAGCATGACCTGGCCTGCGGACGGCTCCAGGTCACCGCCGAGGATTTTCATGAAGGTCGACTTGCCGc > 2:2120/1‑150 (MQ=255) cATGATCACCGTG‑TCGATCACGGTGAATTCCTCGTAGGCGAACTGGTCCTGGCGCAGCTTGCCCAGGCgg < 1:533642/70‑1 (MQ=255) cATGATCACCGTG‑TCGATCACGGTGAATTCCTCGTAGGCGAACTGGTCCTGGCGCAGCTTGCCCAGGCgg > 2:533642/1‑70 (MQ=255) aTGATCACCGTG‑TCGATCACGGTGAATTCCTCGTAGGCGAACTGGTCCTGGCGCAGCTTGCCCAGGCGGGTATTCGGCTCGAGCATGACCTGGCCTGCGGACGGCTCCAGGTCACCGCCGAGGATTTTCATGAAGGTCGACTTGCCGCaa > 2:1158981/1‑150 (MQ=255) aTGATCACCGTG‑TCGATCACGGTGAATTCCTCGTAGGCGAACTGGTCCTGGCGCAGCTTGCCCAGGCGGGTATTCGGCTCGAGCATGACCTGGCCTGCGGACGGCTCCAGGTCACCGCCGAGGATTTTCATGAAGGTCGACTTGCCGCaa < 1:2120/150‑1 (MQ=255) gATCACCGTG‑TCGATCACGGTGAATTCCTCGTAGGCGAACTGGTCCTGGCGCAGCTTGCCCAGGCGGGTATTCGGCTCGAGCATGACCTGGCCTGCGGGCGGCTCCAGGTCACCGCCGAGGATTTTCATGAAGGTCGACTTGCCGCAAcc > 2:545104/1‑150 (MQ=255) gATCACCGTG‑TCGATCACGGTGAATTCCTCGTAGGCGAACTGGTCCTGGCACAGCTTGCCCAGGCGGGTCTACGGCTCGAGCATGACCTGGCCTGCGAACGGCTCCAAGTCACCGCCGAGGATTTTCATGAAGGTCGCCTTGCCGCAAcc > 2:345244/1‑150 (MQ=255) attCACCGTGATCGA‑CACGGTGAATTCCTCGTAGGCGAACTGGTCCTGGCGCAGCTTGCCCAGGCGGGTATTCGGCTCGAGCATGACCTGGCCTGCGGACGGCTCCAg < 2:1473352/106‑1 (MQ=255) attCACCGTGATCGA‑CACGGTGAATTCCTCGTAGGCGAACTGGTCCTGGCGCAGCTTGCCCAGGCGGGTATTCGGCTCGAGCATGACCTGGCCTGCGGACGGCTCCAg > 1:1473352/3‑108 (MQ=255) ttCACCGTGATCGA‑CACGGTGAATTCCTCGTAGGCGAACTGGTCCTGGCGCAGCTTGCCCAGGCGGGTATTCGGCTCGa > 1:738969/2‑79 (MQ=38) ttCACCGTGATCGA‑CACGGTGAATTCCTCGTAGGCGAACTGGTCCTGGCGCAGCTTGCCCAGGCGGGTATTCGGCTCGa < 2:738969/78‑1 (MQ=38) aTCACCGTG‑TCGATCACGGTGAATTCCTCGTAGGCGAACTGGTCCTGGCGCAGCTTGCCCAGGCGGGTATTCGGCTCGAGCATGACCTGGCCTGCGGAc < 1:1252623/99‑1 (MQ=255) aTCACCGTG‑TCGATCACGGTGAATTCCTCGTAGGCGAACTGGTCCTGGCGCAGCTTGCCCAGGCGGGTATTCGGCTCGAGCATGACCTGGCCTGCGGAc > 2:1252623/1‑99 (MQ=255) aTCACCGTG‑TCGATCACGGTGAATTCCTCGTAGGCGAACTGGTCCTGGCGCAGCTTGCCCAGGCGGGTATTCGGCTCGAGCATGACCTGGCCTGCGGACGGCTCCAGGTCACCGCCGAGGATTTTCATGAAGGTCGACTTGCCGCAACCg > 1:259742/1‑150 (MQ=255) tCACCGTG‑TCGATCACGGTGAATTCCTCGTAGGCGAACTGTTCCTGGCGCAGCTTGCCCAGGCGGGTATTCGGCTCGAGCATGACCTGGCCTGCGGGCGGCTCCAGGTCACCGCCGAGGATTTTCATGAAGGTCGCCTTGCCGCAACCGt > 1:2295951/1‑150 (MQ=255) cACCGTG‑TCGATCACGGTGAATTCCTCGTAGGCGAACTGGTCCTGGCGCAGCTTGCCCAGGCGGGTATTCGGCTCGAGCATGACCTGGCCTGCGGACGGCTCCAGGTCACCGCCGAGGATTTTCATGAAGGTCGACTTGCCGCAACCGtt < 2:1787311/150‑1 (MQ=255) cACCGTG‑TCGATCACGGTGAATTCCTCGTAGGCGAACTGGTCCTGGCGCAGCTTGCCCAGGCGGGTATTCGGCTCGAGCATGACCTGGCCTGCGGACGGCTCCAGGTCACCGCCGAGGATTTTCATGAAGGTCGACTTGCCGCAACCGtt > 1:2250741/1‑150 (MQ=255) ccGTG‑TCGATCACGGTGAATTCCTCGTAGGCGAACTGGTCCTGGCACAAATCGCCCAGGCGGGTATTCGGCTCGAGCATGACCTGGCCTGCGGACGGCTCCAGGTCACCGCCGAGGATTTTCATGAAGGTCGACTTGCCGCAACCGTTgg < 2:676200/150‑1 (MQ=255) cGTG‑TCGATCACGGTGAATTCCTCGTAGGCGAACTGGTCCTGGCGCAGCTTGCCCAGGCGGGTATTCGGCTCGAGCATGACCTGGCCTGCGGACGGCTCCAGGTCACCGCCGAGGATTTTCATGAAGGTCGACTTGCCGCAACCGTTGgc < 2:711513/150‑1 (MQ=255) tg‑tCGATCACGGTGAATTCCTCGTAGGCGAACTGGTCCTGGCGCAGCTTGCCCAGGCGGGTATTCGGCTCGAGCATGACCTGGCCTGCGGACGGCTCCAGGTCACCGCCGAGGATTTTCATGAAGGTCGACTTGCCGCAACCGTTGgcgc < 2:259742/150‑1 (MQ=255) tg‑tCGATCACGGTGAATTCCTCGTAGGCGAACTGGTCCTGGCGCAGCTTGCCCAGGCGGGTATTCGGCTCGAGCATGACCTGGCCTGCGGACGGCTCCAGGTCACCGCCGAGGATTTTCATGAAGGTCGACTTGCCGCAACCGTTGgcgc > 1:81254/1‑150 (MQ=255) | CTCGGCGGTGTAGCCGTCCATTTCGGCGAATTCGGTTTCCAGCTCGGCGACGGCCATGCCGTCTTCTTCGGTCATTTCCGGCAGCGAGTAGATACGGTCACGCTCGGCTTTGACTTTCCACAGCTGGCCGTGGCCCATGATCACCGTG‑TCGATCACGGTGAATTCCTCGTAGGCGAACTGGTCCTGGCGCAGCTTGCCCAGGCGGGTATTCGGCTCGAGCATGACCTGGCCTGCGGACGGCTCCAGGTCACCGCCGAGGATTTTCATGAAGGTCGACTTGCCGCAACCGTTGGCGC > NC_002947/3340475‑3340770 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |