| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 313,852:1 | +A | 5.4% | intergenic (+23/+28) | ygaU → / ← yrfG | murein cross‑linking regulator/purine nucleotidase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 313,852 | 1 | . | A | 5.4% | 463.2 / 18.2 | 111 | intergenic (+23/+28) | ygaU/yrfG | murein cross‑linking regulator/purine nucleotidase |
| Reads supporting (aligned to +/- strand): ref base . (52/53); new base A (3/3); total (55/56) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.17e-01 | |||||||||||
Only 100 of 112 total aligned reads displayed.
AGCCATTGCCATGGTCGTGTATGGCAATGCCAATCAGTACAACAAGATTTTCGAGGCCAACAAGCCGATGCTCAAACACCCGGACAAGATCTATCCGGGGCAGGTGCTGCGTATTCCTGACTGATCGCTGAAGTCTGTACAGGCCTC‑TTCGCGGGCGCGCCCGCGAATGGGGCCTTACAGGCCTACCAGTAACTCCCGGTAATCCTCGACCGCCGCAAACTCTTCAGTATCCCGCGGCCCTGCTTTGCTATCCGGCTGGCGCACCGCCAGCAAGTGCCCCACACCAAACCGCCGT > NC_002947/313706‑314000 | aGCCATTGCCATGGTCGTGTATGGGAATGCAAATCATTACAACAAGATTTTCGAGGCCAACAAGCCGATGCTCAAACAACCGGACAAGATCTATCCGGGGCAGGTGCTGCGTATTCCTGACTGATAGGTGAAGTCTGTACAGGCCTC‑TTc > 1:467281/1‑150 (MQ=255) aTTGCCATGGTCGTGTATGGCAATGCCAATCAGTACAACAAGATTTTCGAGGCCAACAAGCCGATGCTCAAACACCCGGACAAGATCTATCCGGGGCAGGTGCTGCGTATTCCTGACTGATCGCTGAAGTCTGTACAGGCCTC‑TTCGCgg < 1:1156170/150‑1 (MQ=255) gTCGTGTATGGCAATGCCAATCAGTACAACAAGATTTTCGAGGCCAACAAGCCGATGCTCAAACACCCGGACAAGATCTATCCGGGGCAGGTGCTGCGTATTCCTGACTGATCGCTGAAGTCTGTACAGGCCTC‑TTCGCGGGCGCGCCcg > 2:208978/1‑150 (MQ=255) gtATGGCAATGCCAATCAGTACAACAAGATTTTCGAGGCCAACAAGCCGATGCTCAAACACCCGGACAAGATCTATCCGGGGCAGGTGCTGCGTATTCCTGACTGATCGCTGAAGTCTGTACAGGCCTC‑TTCGCGGGCGCGCCcgc < 1:617390/146‑1 (MQ=255) gtATGGCAATGCCAATCAGTACAACAAGATTTTCGAGGCCAACAAGCCGATGCTCAAACACCCGGACAAGATCTATCCGGGGCAGGTGCTGCGTATTCCTGACTGATCGCTGAAGTCTGTACAGGCCTC‑TTCGCGGGCGCGCCcgc > 2:617390/1‑146 (MQ=255) gtATGGCAATGCCAATCAGTACAACAAGATTTTCGAGGCCAACAAGCCGATGCTCAAACACCCGGACAAGATCTATCCGGGGCAGGTGCTGCGTATTCCTGACTGATCGCTGAAGTCTGTACAGGCCTC‑TTCGCGGGCGCGCCCGCGaag > 2:134065/1‑149 (MQ=255) gtATGGCAATGCCAATCAGTACAACAAGATTTTCGAGGCCAACAAGCCGATACTAAAACACCCGGACAAGATCTATCCGGGGCAGGTGCTGCGTATTCCTGACTGATCGCTGAAGTCTATACAGGCCTC‑TTCGCAAGCGCGCCCACAAAt > 2:348780/1‑150 (MQ=255) tATGGCAATGCCAATCAGTACAACAAGATTTTCGAGGCCAACAAGCCGATGCTCAAACACCCGGACAAGATCTATCCGGGGCAGGTGCTGCGTATTCCTGACTGATCGCTGAAGTCTGTACAGGCCTC‑TTCGCGGGCGCGCCCGCGaaga < 1:134065/150‑3 (MQ=255) tATGGCAATGCCAATCAGTACAACAAGATTTTCGAGGCCAACAAGCCGATGCTCAAACACCCGGACAAGATCTATCCGGGGCAGGTGCTGCGTATTCCTGACTGATCGCTGAAGTCTGTACAGGCCTC‑TTCGCGGGCGCGCCCGCGAATg > 1:505101/1‑150 (MQ=255) tATGGCAATGCCAATCAGTACAACAAGATTTTCGAGGCCAACAAGCCGATGCTCAAACACCCGGACAAGATCTATCCGGGGCAGGTGCTGCGTATTCCTGACCGATCGCTGAAGTCTGTACAGGCCTC‑TTCGCGGGCGCGCCCGCGaaga < 1:1665034/150‑3 (MQ=255) tGGCAATGCCAATCAGTACAACAAGATTTTCGAGGCCAACAAGCCGATGCTCAAACACCCGGACAAGATCTATCCGGGGCAGGTGCTGGGTATTCCTGACTGATCGCTAAAGTCTGTACAGGCCTC‑TTCGCGTGCTCCCCCGGGAATggg < 2:349483/150‑1 (MQ=255) aaTGCCAATCAGTACAACAAGATTTTCGAGGCCAACAAGCCGATGCTCAAACACCCGGACAAGATCTATCCGGGGCAGGTGCTGCGTATTCCTGACTGATCGCTGAAGTCTGTACAGGCCTC‑TTCGCGGGCGCGCCCGCGAATGGGGCCt > 2:2037127/1‑150 (MQ=255) ccAATCAGTACAACAAGATTTTCGAGGCCAACAAGCCGATGCTCAAACACCCGGACAAGATCTATCCGGGGCAGGTGCTGCGTATTCCTGACTGATCGCTGAAGTCTGTACAGGCCTC‑TTCGCGGGCGCGCCCGCGAATGGGGCCTTACa < 1:2037127/150‑1 (MQ=255) ccAATCAGTACAACAAGATTTTCGAGGCCAACAAGCCGATGCTCAAACACCCGGACAAGATCTATCCGGGGCAGGTGCTGCGTATTCCTGACTGATCGCTGAAGTCTGTACAGGCCTC‑TTAGCGGGCGCGCCAGCGAATGGGTCCTTACa < 2:1354525/150‑1 (MQ=255) cAATCAGTACAACAAGATTTTCGAGGCCAACAAGCCGATGCTCAAACACCCGGACAAGATCTATCCGGGGCAGGTGCTGCGTATTCCTGACTGATCGCTGAAGTCTGTACAGGCCTC‑TTCGCGGgcgc > 1:2162096/1‑128 (MQ=255) cAATCAGTACAACAAGATTTTCGAGGCCAACAAGCCGATGCTCAAACACCCGGACAAGATCTATCCGGGGCAGGTGCTGCGTATTCCTGACTGATCGCTGAAGTCTGTACAGGCCTC‑TTCGCGGGCGCGCCCGCGAATGGGGCCTTACAg > 1:51366/1‑150 (MQ=255) cAATCAGTACAACAAGATTTTCGAGGCCAACAAGCCGATGCTCAAACACCCGGACAAGATCTATCCGGGGCAGGTGCTGCGTATTCCTGACTGATCGCTGAAGTCTGTACAGGCCTC‑TTCGCGGGCGCGCCCGCGAATGGGGCCTTACAg < 1:2202627/150‑1 (MQ=255) cAATCAGTACAACAAGATTTTCGAGGCCAACAAGCCGATGCTCAAACACCCGGACAAGATCTATCCGGGGCAGGTGCTGCGTATTCCTGACTGATCGCTGAAGTCTGTACAGGCCTC‑TTCGCGGGCGCGCCCGCGAATGGGGCCTTACAg < 2:51366/150‑1 (MQ=255) cAATCAGTACAACAAGATTTTCGAGGCCAACAAGCCGATGCTCAAACACCCGGACAAGATCTATCCGGGGCAGGTGCTGCGTATTCCTGACTGATCGCTGAAGTCTGTACAGGCCTC‑TTCGCGGGCGCGCCCGCGAATGGGGCCTTACAg > 2:2265058/1‑150 (MQ=255) aaTCAGTACAACAAGATTTTCGAGGCCAACAAGCCGATGCTCAAACACCCGGACAAGATCTATCCGGGGCAGGTGCTGCGTATTCCTGACTGATCGCTGAAGTCTGTACAGGCCTC‑TTCGCGGGCGCGCCCGCGAATGGGGCCTTACAgg < 1:943116/150‑1 (MQ=255) aaTCAGTACAACAAGATTTTCGAGGCCAACAAGCCGATGCTCAAACACCCGGACAAGATCTATCCGGGGCAGGTGCTGCGTATTCCTGACTGATCGCTGAAGTCTGTACAGGCCCCATTCGCGGGCGCGCCCGCGaagag < 1:1755358/140‑4 (MQ=255) aaTCAGTACAACAAGATTTTCGAGGCCAACAAGCCGATGCTCAAACACCCGGACAAGATCTATCCGGGGCAGGTGCTGCGTATTCCTGACTGATCGCTGAAGTCTGTACAGGCCCCATTCGCGGGCGCGCCCGCGaagag > 2:1755358/1‑137 (MQ=255) aTCAGTACAACAAGATTTTCGAGGCCAACAAGCCGATGCTCAAACACCCGGACAAGATCTATCCGGGGCAGGTGCTGCGTATTCCTGACTGATCGCTGAAGTCTGTACAGGCCTC‑TTCGCggg > 2:490340/1‑123 (MQ=255) aTCAGTACAACAAGATTTTCGAGGCCAACAAGCCGATGCTCAAACACCCGGACAAGATCTATCCGGGGCAGGTGCTGCGTATTCCTGACTGATCGCTGAAGTCTGTACAGGCCTC‑TTCGCggg < 1:490340/123‑1 (MQ=255) aTCAGTACAACAAGATTTTCGAGGCCAACAAGCCGATGCTCAAACACCCGGACAAGATCTATCCGGGGCAGGTGCTGCGTATTCCTGACTGATCGCTGAAGTCTGTACAGGCCTC‑TTCGCGGGCGCGCCCGCGAATGGGGCCTTACAGGc < 2:301019/150‑1 (MQ=255) aTCAGTACAACAAGATTTTCGAGGCCAACAAGCCGATGCTCAAACACCCGGACAAGATCTATCCGGGGCAGGTGCTGCGTATTCCTGACTGATCGCTGAAGTCTGTACAGGCCTC‑TTCGCGGGCGCGCCCGCGAATGGGGCCTTACAGGc < 2:2306618/150‑1 (MQ=255) aTCAGTACAACAAGATTTTCGAGGCCAACAAGCCGATGCTCAAACACCCGGACAAGATCTATCCGGGGCAGGTGCTGCATATTCCTGACTGAGCGCTGAAGTCTGTACAGGCCTC‑TTCGCGGGCGCGCCCGCGAATGGGGCCTTACAGGc < 1:1691146/150‑1 (MQ=255) gTACAACAAGATTTTCGAGGCCAACAAGCCGATGCTCAAACACCCGGACAAGATCTATCCGGGGCAGGTGCTGCGTATTCCTGACTGATCGCTGAAGTCTGTACAGGCCTC‑TTCGCGGGCGCGCCCGCGAATgg < 1:241699/134‑1 (MQ=255) gTACAACAAGATTTTCGAGGCCAACAAGCCGATGCTCAAACACCCGGACAAGATCTATCCGGGGCAGGTGCTGCGTATTCCTGACTGATCGCTGAAGTCTGTACAGGCCTC‑TTCGCGGGCGCGCCCGCGAATgg > 2:241699/1‑134 (MQ=255) gTACAACAAGATTTTCGAGGCCAACAAGCCGATGCTCAAACACCCGGACAAGATCTATCCGGGGCAGGTGCTGCGTATTCCTGACTGATCGCTGAAGTCTGTACAGGCCTC‑TTCGCGGGCGCGCCCGCGAATGGGGCCTTACAGGCCTAc < 2:1566977/150‑1 (MQ=255) aacaaGATTTTCGAGGCCAACAAGCCGATGCTCAAACACCCGGACAAGATCTATCCGGGGCAGGTGCTGCGTATTCCTGACTGATCGCTGAAGTCTGTACAGGCCTC‑TTCGCGGGCGCGCCCGCGaa < 2:394552/127‑1 (MQ=255) aacaaGATTTTCGAGGCCAACAAGCCGATGCTCAAACACCCGGACAAGATCTATCCGGGGCAGGTGCTGCGTATTCCTGACTGATCGCTGAAGTCTGTACAGGCCTC‑TTCGCGGGCGCGCCCGCGaa > 1:394552/1‑127 (MQ=255) aacaaGATTTTCGAGGCCAACAAGCCGATGCTCAAACACCCGGACAAGATCTATCCGGGGCAGGTGCTGCGTATTCCTGACTGATCGCTGAAGTCTGTACAGGCCTC‑TTCGCGGGCGCGCCCGCGAATGGGGCCTTACAGGCCTACCAGt > 1:312580/1‑150 (MQ=255) caaTATTTTCTCGGCCAACAATGCTATGCTCAAACGCCCCGACAAGCTCTATCCGGGTCATGTGCTGCGTATTCCTGACTGATCTCTGAAGTCTTTACAGGCCTC‑TTCACGTGCGCGCCCGCGAATGGGGCCTTACAGGCCTACCAGTaa < 2:467281/150‑1 (MQ=255) tttCGAGGCCAACAAGCCGATGCTCAAACACCCGGACAAGATCTATCCGGGGCAGGTGCTGCGTATTCCTGACTGATCGCTGAAGTCTGTACAGGCCTC‑TTCGCGGGCGCGCCCGCGAATGGGGCCTTACAGGCCTACCAGTTACTCCCg < 1:1461003/150‑1 (MQ=255) tttCGAGGCCAACAAGCCGATGCTCAAACACCCGGACAAGATCTATCCGGGGCAGGTGCTGCGTATTCCTGACTGATCGCTGAAGTCTGTACAGGCCTC‑TTCGCGGGCGCGCCCGCGAATGGGGCCTTACAGGCCTACCAGTAACTCCCg < 1:208978/150‑1 (MQ=255) ttCGAGGCAAACAAGCCGATGCTCAAACACCTGGACAAGATCTATCCGGGGCAGGTGCTGCGTATTCCTGACTGATCGCTGAAGTCTGTACAGGCCTC‑TTCGCGGGCGCGCCCGCGAATGGGGCCTTACAGGCCTACCAGTAACTCCCgg < 1:348780/150‑1 (MQ=255) gAGGCCAACAAGCCGATGCTCAAACACCCGGACAAGATCTATCCGGGGCAGGTGCTGCGTATTCCTGACTGATCGCTGAAGTCTGTACAGGCCTC‑TTCGCGGGCGCGCCCGCGAATGGGGCCTTACAGGCCTACCAGTAACTCCCGGTaa < 1:1235600/150‑1 (MQ=255) gCCAACAAGCCGATGCTCAAACACCCGGACAAGATCTATCCGGGGCAGGTGCTGCGTATTCCTGACTGATCGCTGAAGTCTGTACAGGCCTC‑TTCGCGGGCGCGCCCGCGAATGGGGCCTTACAGGCCTACCAGTAACTCCCGGTAATc > 2:739566/1‑149 (MQ=255) gaacaaGCCGATGCTCAAACACCCGGACAAGATCTATCCGGGGCAGGTGCTGCGTATTCCTGACTGATCGCTGAAGTCTGTACAGGCCTC‑TTCGCGGGCGCGCCCGCGAATGGGGCCTTACAGGCCTACCAGTAACTCCCGGTAATCCTc > 2:1649904/2‑150 (MQ=255) caacaaGCCGATGCTCAAACACCCGGACAAGATCTATCCGGGGCAGGTGCTGCGTATTCCTGACTGATCGCTGAAGTCTGTACAGGCCTC‑TTCGCGGGCGCGCCCGCGAATGGGGCCTTACAGGCCTACCAGTAACTCCCGGTAATCCTc < 1:1384897/150‑1 (MQ=255) aacaaGCCGATGCTCAAACACCCGGACAAGATCTATCCGGGGCAGGTGCTGCGTATTCCTGACTGATCGCTGAAGTCTGTACAGGCCTC‑TTCGCGGGCGCGCCCGCGAATGGGGCCTTACAGGCCTACCAGTAACTCCCgg > 2:162463/1‑141 (MQ=255) aacaaGCCGATGCTCAAACACCCGGACAAGATCTATCCGGGGCAGGTGCTGCGTATTCCTGACTGATCGCTGAAGTCTGTACAGGCCTC‑TTCGCGGGCGCGCCCGCGAATGGGGCCTTACAGGCCTACCAGTAACTCCCgg < 1:162463/141‑1 (MQ=255) acaaGCCGATGCTCAAACACCCGGACAAGATCTATCCGGGGCAGGTGCTGCGTATTCCTGACTGATCGCTGAAGTCTGTACAGGCCTC‑TTCGCGGGCGCGCCCGCGAATGGGGCCTTACAGGCCTACCAGTAACTCCCGGTAATCCTCGa < 1:2330711/150‑1 (MQ=255) aaGCCGATGCTCAAACACCCGGACAAGATCTATCCGGGGCAGGTGCTGCGTATTCCTGACTGATCGCTGAAGTCTGTACAGGCCTC‑TTCGCGGGCGCGCCCGCGAATgg > 1:1559720/1‑109 (MQ=255) gATGGTCAAACACCCGGACAAGATCTATCCGGGGCAGGTGCTGCGTATTCCTGACTGATCGCTGAAGTCTGTACAGGCCTC‑TTCGCGGGCGCGCCCGCGCATGGGGCCTTATTGGCCTACCCGTAACTCCCGGTAATCCTCGACcgccgc > 2:535860/1‑150 (MQ=255) aaaCACCCGGACAAGATCTATCCGGGGCAGGTGCTGCGTATTCCTGACTGATCGCTGAAGTCTGTACAGGCCTC‑TTCGCGGGCGCGCCCGCGAATGGGGCCTTACAGGCCTAc > 1:248640/1‑113 (MQ=255) aaaCACCCGGACAAGATCTATCCGGGGCAGGTGCTGCGTATTCCTGACTGATCGCTGAAGTCTGTACAGGCCTC‑TTCGCGGGCGCGCCCGCGAATGGGGCCTTACAGGCCTACCAGTAACTCCCGGTAATCCt < 1:1426816/133‑1 (MQ=255) aaaCACCCGGACAAGATCTATCCGGGGCAGGTGCTGCGTATTCCTGACTGATCGCTGAAGTCTGTACAGGCCTC‑TTCGCGGGCGCGCCCGCGAATGGGGCCTTACAGGCCTACCAGTAACTCCCGGTAATCCt > 2:1426816/1‑133 (MQ=255) aaaCACCCGGACAAGATCTATCCGGGGCAGGTGCTGCGTATTCCTGACTGATCGCTGAAGTCTGTACAGGCCTC‑TTCGCGGGCGCGCCCGCGAATGGGGCCTTACAGGCCTACCAGTAACTCCCGGTAATCCTc > 2:514279/1‑134 (MQ=255) aaaCACCCGGACAAGATCTATCCGGGGCAGGTGCTGCGTATTCCTGACTGATCGCTGAAGTCTGTACAGGCCTC‑TTCGCGGGCGCGCCCGCGAATGGGGCCTTACAGGCCTACCAGTAACTCCCGGTAATCCTc < 1:514279/134‑1 (MQ=255) aaaCACCCGGACAAGATCTATCCGGGGCAGGTGCTGCGTATTCCTGACTGATCGCTGAAGTCTGTACAGGCCTC‑TTCGCGGGCGCGCCCGCGAATGGGGCCTTACAGGCCTACCAGTAACTCCCGGTAATCCTCGACCGCCGCAAActct > 2:1093137/1‑150 (MQ=255) aaCACCCGGACAAGATCTATCCGGGGCAGGTGCTGCGTATTCCTGACTGATCGCTGAAGTCTGTACAGGCCTC‑TTCGCGGGCGCGCCCGCGAATGGGGCCTTACAGGCCTACCAGTAACTCCCGGTAATCCTCGACCGCCGCAAACTCtt < 1:520072/150‑1 (MQ=255) aaCACCCGGACAAGATCTATCCGGGGCAGGTGCTGCGTATTCCTGACTGATCGCTGAAGTCTGTA‑AGGCCCCATTCGCGGGCGCGCCcgc > 1:1098821/1‑90 (MQ=37) aaCACCCGGACAAGATCTATCCGGGGCAGGTGCTGCGTATTCCTGACTGATCGCTGAAGTCTGTA‑AGGCCCCATTCGCGGGCGCGCCcgc < 2:1098821/90‑1 (MQ=37) cccGGACAAGATCTATCCGGGGCAGGTGCTGCGTATTCCTGACTGATCGCTGAAGTCTGTACAGGCCTC‑TTCGCGGGCGCGCCCGCGAATGGGGCCTTACAGGCCTACCAGTAACTCCCGGTAATCCTCGACCGCCGCAAACTCTTCAGt > 1:1673237/1‑150 (MQ=255) aaGATCTATCCGGGGCAGGTGCTGCGTATTCCTGACTGATCGCTGAAGTCTGTACAGGCCTC‑TTCGCGGGCGCGCCCGCGAATGGGGCCTTACAGGCCTACCAGTAACTCCCGGTAATCCTCGACCGCCGTAAACTCTTCAGTATCCcgc > 2:1581221/1‑150 (MQ=255) gATCTATCCGGGGCAGGTGCTGCGTATTCCTGACTGATCGCTGAAGTCTGTACAGGCCTC‑TTCGCGGGCGCGCCCGCGAATggg < 1:2165295/84‑1 (MQ=255) gATCTATCCGGGGCAGGTGCTGCGTATTCCTGACTGATCGCTGAAGTCTGTACAGGCCTC‑TTCGCGGGCGCGCCCGCGAATggg > 2:2165295/1‑84 (MQ=255) gATCTATCCGGGGCAGGTGCTGCGTATTCCTGACTGATCGCTGAAGTCTGTACAGGCCTC‑TTCGCGGGCGCGCCCGCGAATGGGGCCTTACAGGCCTACCAGTAAc < 1:1849379/106‑1 (MQ=255) gATCTATCCGGGGCAGGTGCTGCGTATTCCTGACTGATCGCTGAAGTCTGTACAGGCCTC‑TTCGCGGGCGCGCCCGCGAATGGGGCCTTACAGGCCTACCAGTAAc > 2:1849379/1‑106 (MQ=255) aTCTATCCGGGGCAGGTGCTGCGTATTCCTGACTGATCGCTGAAGTCTGTACAGGCCTC‑TTCGCGGGCGCGCCCGCGAATGGGGCCTTACAGGCCTAc > 1:2210141/1‑98 (MQ=255) aTCTATCCGGGGCAGGTGCTGCGTATTCCTGACTGATCGCTGAAGTCTGTACAGGCCTC‑TTCGCGGGCGCGCCCGCGAATGGGGCCTTACAGGCCTAc < 2:2210141/98‑1 (MQ=255) aTCTATCCGGGGCAGGTGCTGCGTATTCCTGACTGATCGCTGAAGTCTGTACAGGCCTC‑TTCGCGGGCGCGCCCGCGAATGGGGCCTTACAGGCCTACCAGTAACTCCCGGTAATCCTCGACCGCCGCAAACTCTTCAGTATCCCGCGGc < 2:1673237/150‑1 (MQ=255) cTATCCGGGGCAGGTGCTGCGTATTCCTGACTGATCGCTGAAGTCTGTA‑AGGCCCCATTCGCGGGCGCGCCCGCGaaga < 1:1798644/79‑3 (MQ=21) cTATCCGGGGCAGGTGCTGCGTATTCCTGACTGATCGCTGAAGTCTGTA‑AGGCCCCATTCGCGGGCGCGCCCGCGaaga > 2:1798644/1‑77 (MQ=21) aTCCGGGGCAGGTGCTGCGTATTCCTGACTGATCGCTGAAGTCTGTACAGGCCTC‑TTCGCGGGGGCGCCCGCGAATGGGGCCTTACAGGCCTCCCAGTAACTCACGGTAATCCTCCACCGCCGGAAACTCTGCAGTTCCGAGCGGCCCTg > 2:655753/1‑150 (MQ=255) tCCGGGGCAGGTGCTGCGTATTCCTGACTGATCGCTGAAGTCTGTACAGGCCTC‑TTCGCGGGCGCGCCCGCGAATGGGGCCTTACAGGCCTACCAGTAACTCCCGGTAATCCTCGACCGCCGCAAACTCTTCAGTATCCCGCGGCCCTGc > 1:1961975/1‑150 (MQ=255) cGGGGCAGGTGCTGCGTATTCCTGACTGATCGCTGAAGTCTGTACAGGCCTC‑TTCGCGGGCGCGCCCGCGAATGGGGCCTTACAGGCCTACCAGt < 2:2293859/95‑1 (MQ=255) cGGGGCAGGTGCTGCGTATTCCTGACTGATCGCTGAAGTCTGTACAGGCCTC‑TTCGCGGGCGCGCCCGCGAATGGGGCCTTACAGGCCTACCAGt > 1:2293859/1‑95 (MQ=255) cGGGGCAGGTGCTGCGTATTCCTGACTGATCGCTGAAGTCTGTACAGGCCTC‑TTCGCGGGCGCGCCCGCGAATGGGGCCTTACAGGCCTACCAGTAACTCCCGGTAATCCTCGACCGCCGCAAACTCTTCAGTATCCCGCGGCCCTGCtt < 2:425599/150‑1 (MQ=255) ggggCAGGTGCTGCGTATTCCTGACTGATCGCTGAAGTCTGTACAGGCCTC‑TTCGCGGGCGCGCCCGCGAATGGGGCCTTACAGGCCTACCAGTAACTCCCGGTAATCCTCGACCGCCGCAAACTCTTCAGTATCCCGCGGCCCTGCttt < 2:1961975/150‑1 (MQ=255) tgcGTATTCCTGACTGATCGCTGAAGTCTGTACAGGCCTC‑TTCGCGGGCGCGCCCGCGAATGGGGCCTTACAGGCCTACCAGTAACTCCCGGTAATCCTCGACCGCCGCAAACTCtt < 1:16802/117‑1 (MQ=255) tgcGTATTCCTGACTGATCGCTGAAGTCTGTACAGGCCTC‑TTCGCGGGCGCGCCCGCGAATGGGGCCTTACAGGCCTACCAGTAACTCCCGGTAATCCTCGACCGCCGCAAACTCtt > 2:16802/1‑117 (MQ=255) gcGTATTCCTGACTGATCGCTGAAGTCTGTACAGGCCTC‑TTCGCGGGCGCGCCCGCGAATGGGGCCTTACAGGCCTACCAGTAACTCCCGGTAATCCTCGACCGCCGCAAACTCTTCAGTATCCCGCTGCCCTGCTTTGCTATCCGGCTg > 2:1758839/1‑150 (MQ=255) gcGTATTCCTGACTGATCGCTGAAGTCTGTACAGGCCTC‑TTCGCGGGCGCGCCCGCGAATGGGGCCTTACAGGCCTACCAGTAACTCCCGGTAATCCTCGACCGCCGCAAACTCTTCAGTATCCCGCGGCCCTGCTTTGCTATCCGGCTg < 2:312580/150‑1 (MQ=255) cGTATTCCTGACTGATCGCTGAAGTCTGTACAGGCCTC‑TTCGCGGGCGCGCCCGCGAATGGGGCCTTACAGGCCTACCAGTAACTCCCGGTAATCCTCGACCGCCGCAAACTCTTCAGTATCCCGCGGCCCTGCTTTGCTATCCGGCTgg > 1:1537252/1‑150 (MQ=255) tATTCCTGACTGATCGCTGAAGTCTGTACAGGCCTC‑TTcgcg > 1:1298944/1‑42 (MQ=255) tATTCCTGACTGATCGCTGAAGTCTGTACAGGCCTC‑TTcgcg < 2:1298944/42‑1 (MQ=255) ttCCTGACTGATCGCTGAAGTCTGTACAGGCCTC‑TTCGCGGGCGCGCCCGCGAATGGGGCCTTACAGGCCTACCAGTAACTCCCGGTAATCCTCGACCGCCGCAAACTCTTCAGTATCCCGCGGCCCTGCTTTGCTATCCGGCTGGCGCa > 1:1027614/1‑150 (MQ=255) tCCTGACTGATCGCTGAAGTCTGTACAGGCCTC‑TTCGCGGGCGCGCCCGCGAATGGGGCCTTACAGGCCTACCAGTAACTCCCGGTAATACTCGACAGGGGCACTTCCTCCGGTATCGCGCGGCCCTGCTTTGCTATCCGGCTGGCGCAc > 1:2341750/1‑150 (MQ=255) ccTGACTGATCGCTGAAGTCTGTACAGGCCTC‑TTCGCGGGCGCGCCCGCGAATGGGGCCTTACAGGCCTACCAGTAACTCCCGGTAATCCTCGACCGCCGCAAACTCTTCAGTATCCCGCGGCCCTGCTTTGCTATCCGGCTGGCGCAcc < 1:1155226/150‑1 (MQ=255) tgactgaTCGCTGAAGTCTGTACAGGCCTC‑TTCGCGGGCGCGCCCGCGAATGGGGCCTTACAGGCCTACCAGTAACTCCCGGTAATCCTCGACCGCCGCAAACTCTTCAGTATCCCGCGGCCCTGCTTTg < 2:769263/130‑1 (MQ=255) tgactgaTCGCTGAAGTCTGTACAGGCCTC‑TTCGCGGGCGCGCCCGCGAATGGGGCCTTACAGGCCTACCAGTAACTCCCGGTAATCCTCGACCGCCGCAAACTCTTCAGTATCCCGCGGCCCTGCTTTg > 1:769263/1‑130 (MQ=255) ctgaTCGCTGAAGTCTGTACAGGCCTC‑TTCGCGGGCGCGCCCGCGAATggg < 2:1691492/51‑1 (MQ=255) ctgaTCGCTGAAGTCTGTACAGGCCTC‑TTCGCGGGCGCGCCCGCGAATggg > 1:1691492/1‑51 (MQ=255) aTCGCTGAAGTCTGTACAGGCCTC‑TTCGCGGGCGCGCCCGCGAATGGGGCCTTACAGGCCTACCAGTAACTCCCGGTAATCCTCGACCGCCGCAAACTCTTCAGTATCCCGCGGCCCTGCTTTGCTATCCGGCTGGCGCACCGCCAGCaa < 2:1628077/150‑1 (MQ=255) aTCGCTGAAGTCTGTACAGGCCTC‑TTCGCGGGCGCGCCCGCGAATGGGGCCTTACAGGCCTACCAGTAACTCCCGGTAATCCTCGACCGCCGCAAACTCTTCAGTATCCCGCGGCCCTGCTTTGCTATCCGGCTGGCGCACCGCCAGCaa < 2:2283864/150‑1 (MQ=255) tCGCTGAAGTCTGTACAGGCCTC‑TTCGCGGGCGCGCCCGCGAATGGGGCCTTACAGGCCTACCAGTAACTCCCGGTAATCCTCGACCGCCGCAAACTCTTCAGTATCCCGCGGCCCTGCTTTGCTATCCGGCTGGCGCACCGCCAGCAAg > 2:1967040/1‑150 (MQ=255) gTCTGTACAGGCCTC‑TTCGCGGGCGCGCCCGCGAATGGGGCCTTACAGGCCTACCAGTAACTCCCGGTAATCCTCGACCGCCGCAAACTCTTCAGTATCCCGCGGCCCTGCTTTGCTATACGGCTGGCGCACCGCCAGCAAGTGCCCcac > 1:2127462/1‑150 (MQ=255) tCTGTACAGGCCTC‑TTCGCGGGCGCGCCCGCGAATGGGGCCTTACAGGCCTACCAGTAACTCCCGGTAATCCTCGACCGCCGCAAACTCTTCAGTATCCCGCGGCCCTGCTTTGCTATCCGGCTGGCGCACCGCCAGCAAGTGccc < 2:1449107/146‑1 (MQ=255) tCTGTACAGGCCTC‑TTCGCGGGCGCGCCCGCGAATGGGGCCTTACAGGCCTACCAGTAACTCCCGGTAATCCTCGACCGCCGCAAACTCTTCAGTATCCCGCGGCCCTGCTTTGCTATCCGGCTGGCGCACCGCCAGCAAGTGccc > 1:1449107/1‑146 (MQ=255) tCTGTACAGGCCTC‑TTCGCGGGCGCGCCCGCGAATGGGGCCTTACAGGCCTACCAGTAACTCCCGGTAATCCTCGACCGCCGCAAACTCTTCAGTATCCCGCGGCCCTGCTTTGCTATCCGGCTGGCGCACCGCCAGCAAGTGCCCcaca > 2:2222911/1‑150 (MQ=255) tACAGGCCTC‑TTCGCGGGCGCGCCCGCGAATGGGGCCTTACAGGCCTACCAGTAACTCCCGGTAATCCTCGACCGCCGCAAACTCTTCAGTATCCCGCGGCCCTGCTTTGCTATCCGGCTGGCGCACCGCCAGCaa > 2:2172497/1‑136 (MQ=255) tACAGGCCTC‑TTCGCGGGCGCGCCCGCGAATGGGGCCTTACAGGCCTACCAGTAACTCCCGGTAATCCTCGACCGCCGCAAACTCTTCAGTATCCCGCGGCCCTGCTTTGCTATCCGGCTGGCGCACCGCCAGCaa < 1:2172497/136‑1 (MQ=255) cAGGCCTC‑TTCGCGGGCGCGCCCGCGAATGGGGCCTTACAGGCCTACCAGTAACTCCCGGTAATCCTCGACCGCCGCAAACTCTTCAGTATCCCGCGGCCCTGCTTTGCTATCCGGCTGGCGCACCGCCAGCAAGTGCCCCACACCAAAc > 1:1483915/1‑150 (MQ=255) aGGCCTC‑TTCGCGGGCGCGCCCGCGAATGGGGCCTTACAGGCCTACCAGTAACTCCCgg > 1:648992/1‑59 (MQ=255) aGGCCTC‑TTCGCGGGCGCGCCCGCGAATGGGGCCTTACAGGCCTACCAGTAACTCCCgg < 2:648992/59‑1 (MQ=255) gCCTC‑TTCGCGGGCGCGCCCGCGAATGGGGCCTTACAGGCCTACCAGTAACTCCCGGTAATCCTCGACCGCCGCAAACTCTTCAGTATCCCGCGGCCCTGCTTTGCTATCCGGCTGGCGCACCGCCAGCAAGTGCCCCACACCAAAccgc > 1:1249456/1‑150 (MQ=255) tc‑tTCGCGGGCGCGCCCGCGAATGGGGCCTTACAAGCCTACCAGTAACTCCCGGTAATCCTCGACCGCCGCAAACTCTTCAGTATCCTGCGGCCCTGCTTTGCTATCCGGCTGGCGCACCGCCAGCAAGTGCCCCACACCAAACCGCTGt > 1:1180294/1‑150 (MQ=255) | AGCCATTGCCATGGTCGTGTATGGCAATGCCAATCAGTACAACAAGATTTTCGAGGCCAACAAGCCGATGCTCAAACACCCGGACAAGATCTATCCGGGGCAGGTGCTGCGTATTCCTGACTGATCGCTGAAGTCTGTACAGGCCTC‑TTCGCGGGCGCGCCCGCGAATGGGGCCTTACAGGCCTACCAGTAACTCCCGGTAATCCTCGACCGCCGCAAACTCTTCAGTATCCCGCGGCCCTGCTTTGCTATCCGGCTGGCGCACCGCCAGCAAGTGCCCCACACCAAACCGCCGT > NC_002947/313706‑314000 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |