| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 3,703,316:1 | +C | 5.6% | coding (97/270 nt) | PP_5596 → | hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 3,703,316 | 1 | . | C | 5.6% | 294.8 / 10.2 | 71 | coding (97/270 nt) | PP_5596 | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base . (37/30); new base C (2/2); total (39/32) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.45e-01 | |||||||||||
CCACCGCCCGATCAATCAAAATGTCATCCATGGAGAAGAGGAGGCCCCCTGCGATGCCTAGCCCACAGCTGTACATAATCGATTACAAACTGCATGACCAACCGCGCAGTTTCATCATCCGCCTGGAACGCCTGGACAATGCCGAGGCCT‑GGCATTGGGCAAGTTGTGATGCGGGCATTGGCATCATTCCCAAGTTCGGTCGCGAGAAAATCAGGAAGGTCAGTCGGCCGATGGCCGAGCGTTACGGCATTACCGCCGTGAGCTGGCGGATTTCGGGGAGCAAGCCCAACCAGTCGGTG > NC_002947/3703167‑3703465 | ccACCGCCCGATCAATCAAAATGTCATCCATGGAGAAGAGGAGGCCCCCTGCGATGCCTAGCCCACAGCTGTACATAATCGATTACAAACTGCATGACCAACCGCGCAGTTTCATCATCCGCCTGGAACGCCTGGACAATGCCGAGGCCt < 1:879391/150‑1 (MQ=255) cACCGCCCGATCAATCAAAATGTCATCCATGGAGAAGAGGAGGCCCCCTGCGATGCCTAGCCCACAGCTGTACATAATCGATTACAAACTGCATGACCAACCGCGCAGTTTCATCATCCGCCTGGAACGCCTGGACAATGCCGAGGCCT‑g < 1:521113/150‑1 (MQ=255) cACCGCCCGATCAATCAAAATGTCATCCATGGAGAAGAGGAGGCCCCCTGCGATGCCTAGCCCACAGCTGTACATAATCGATTACAAACTGCATGACCAACCGCGCAGTTTCATCATCCGCCTGGAACGCCTGGACAATGCCGAGGCCT‑g < 1:1040966/150‑1 (MQ=255) aacGCCCGATCAATCAAAATGTCATTCATGGAGAAGAGGAGGCCGCCTTCGATGCCTAGCCAACAGCTGTACATAATCGATTACAAACTGCATGACCAACCGCGCAGTTTCATCATCCGCCTGGAACGCCTGGACAATGCCGAGGCCT‑gg > 2:342707/3‑150 (MQ=255) cGATCAATCAAAATGTCATCCATGGAGAAGAGGAGGCCCCCTGCGATGCCTAGCCCACAGCTGTACATAATCGATTACAAACTGCATGACCAACCGCGCAGTTTCATCATCCGCCTGGAACGCCTGGACAATGCCGAGGCCT‑GGCATTgg > 2:2338980/1‑150 (MQ=255) cGATCAATCAAAATGTCATCCATGGAGAAGAGGAGGCCCCCTGCGATGCCTAGCCCACAGCTGTACATAATCGATTACAAACTGCATGACCAACCGCGCAGTTTCATCATCCGCCTGGAACGCCTGGACAATGCCGAGGCCT‑GGCATTgg < 2:1096612/150‑1 (MQ=255) tcaaAATGTCATCCATGGAGAAGAGGAGGCCCCCTGCGATGCCTAGCCCACAGCTGTACATAATCGATTACAAACTGCATGACCAACCGCGCAGTTTCATCATCCGCCTGGAACGCCTGGACAATGCCGAGGCCT‑GCCATTGGGCAAGtt > 2:736936/1‑150 (MQ=255) caaAATGTCATCCATGGAGAAGAGGAGGCCCCCTGCGATGCCTAGCCCACAGCTGTACATAATCGATTACAAACTGCATGACCAACCGCGCAGTTTCATCATCCGCCTGGAACGCCTGGACAATGCCGAGGCCT‑GGCATTGGGCAAGTtg < 1:1705762/150‑1 (MQ=255) aaaaTGTCATCCATGGAGAAGAGGAGGCCCCCTGCGATGCCTAGCCCACAGCTGTACATAATCGATTACAAACTGCATGACCAACCGCGCAGTTTCATCATCCGCCTGGAACGCCTGGACAATGCCGAGGCCT‑GGCATTGGGCAAGTtgt > 2:2377520/1‑150 (MQ=255) aaaaTGTCATCCATGGAGAAGAGGAGGCCCCCTGCGATGCCTAGCCCACAGCTGTACATAATCGATTACAAACTGCATGACCAACCGCGCAGTTTCATCATCCGCCTGGAACGCCTGGACAATGCCGAGGCCT‑GGCATTGGGCAAGTtgt > 2:1893394/1‑150 (MQ=255) cATCCATGGAGAAGAGGAGGCCCCCTGCAATGCCTAGCCCACAGCTGTACATAATCGATTACAAACTGCATGACCAACCGCGCAGTTTCATCATCCGCCTGGAACGCCTTGACAATACCGAGGCCT‑GGCATTGGGCAAGTTGTGATGCgg < 1:2337747/150‑1 (MQ=255) aTCCATGGAGAAGAGGAGGCCCCCTGCGATGCCTAGCCCACAGCTGTACATAATCGATTACAAACTGCATGACCAACCGCGCAGTTTCATCATCCGCCTGGAACGCCTGGACAATGCCGAGGCCT‑GGCATTGGGCAAGTTGTGATGCggg > 1:2074843/1‑150 (MQ=255) gagaAGAGGAGGCCCCCTGCGTTGCCTAGCCCACAGCTGTACATAATCGATTACAAACTGCATGACCAACCGCGCAGTTTCATCATCCGCCTGGAACGCCTGGACAATGCCCAGGCCT‑GGCATTGGGCAAGTTGTGATGCGGGCATTGGc < 2:1397028/150‑1 (MQ=255) gaggagGCCCCCTGCGATGCCTAGCCCACAGCTGTACATAATCGATTACAAACTGCATGACCAACCGCGCAGTTTCATCATCCGCCTGGAACGCCTGGACAATGCCGAGGCCT‑GGCATTgt > 2:35352/1‑120 (MQ=255) gaggagGCCCCCTGCGATGCCTAGCCCACAGCTGTACATAATCGATTACAAACTGCATGACCAACCGCGCAGTTTCATCATCCGCCTGGAACGCCTGGACAATGCCGAGGCCT‑GGCATTgt < 1:35352/121‑2 (MQ=255) gaggagGCCCCCTGCGATGCCTAGCCCACAGCTGTACATAATCGATTACAAACTGCATGACCAACCGCGCAGTTTCATCATCCGCCTGGAACGCCTGGACAATGCCGAGGCCT‑GGCATTGGGCAAGTTGTGATGCGGGCATTGGcatcat > 1:80664/1‑150 (MQ=255) gCCCCCTGCGATGCCTAGCCCACAGCTGTACATAATCGATTACAAACTGCATGACCAACCGCGCAGTTTCATCATCCGCCTGGAACGCCTGGACAATGCCGAGGCCT‑GGCATTGGGCAAGTTGTGATGCGGGCATTGGCATCATTCCCaa > 1:1550297/1‑150 (MQ=255) cccTGCGATGCCTAGCCCACAGCTGTACATAATCGATTACAAACTGCATGACCAACCGCGAAGTTTCATCATCCGCCTGGAACGCCTGGAGAATGCCGAGGCCT‑GGCATTGGGCAAGTTGTGATGCGGGCATTGGCATCATTCCCAAGtt < 1:1105139/150‑1 (MQ=255) cTAGCCCACAGCTGTACATAATCGATTACAAACTGCATGACCAACCGCGCAGTTTCATCATCCGCCTGGAACGCCTGGACAATGCCGAGGCCT‑GGCATTGGGCAAGTTGTGATGCGGGCATTGGCATCATTCCCAAGTTCGGTCGCgaga > 2:1912925/1‑150 (MQ=255) cTAGCCCACAGCTGTACATAATCGATTACAAACTGCATGACCAACCGCGCAGTTTCATCATCCGCCTGGAACGCCTGGACAATGCC‑AGGCCTCGGCATTgtcc > 1:988415/1‑100 (MQ=255) cTAGCCCACAGCTGTACATAATCGATTACAAACTGCATGACCAACCGCGCAGTTTCATCATCCGCCTGGAACGCCTGGACAATGCC‑AGGCCTCGGCATTgtcc < 2:988415/103‑4 (MQ=255) cATAATCGATTACAAACTGCATGACCAACCGCGCAGTTTCATCATCCGCCTGGAACGCCTGGACAATGCCGAGGCCT‑GGCATTGGGCAAGTTGTGATGCGGGCATTGGCATCATTCCCAAGTTCGGTCGCGAGAAAATCAGGAAGGTCAg > 1:1548780/1‑150 (MQ=255) cATAATCGATTACAAACTGCATGACCAACCGCGCAGTTTCATCATCCGCCTGGAACGCCTGGACAATGCCGAGACCT‑GAGATTGGGCAAGTTGTGATGCGGGCATTGGCATCATTCCCGAGTTCGGTCGCGAGAAAATCAGGAAGGTCAg > 2:693807/1‑150 (MQ=255) aaTCGATTACAACCTAAATGACCAACCGCGCAGTTTCATCATCCGCCTGGAACGCCTGGACAATGCCGAGGCCT‑GGCATTGGGCAAGTTGTGATGCGGGCATTGGCATCATTCCCAAGTTCGGTCGCGAGAAAATCAGGAAGGTCAGTCg > 2:2394215/1‑150 (MQ=255) aaTCGATTACAAACTGCATGACCAACCGCGCAGTTTCATCATCCGCCTGGAACGCCTGGACAATGCCGAGGCCT‑GGCATTGGGCAAGTTGTGATGCGGGCATTGGCATCATTCCCAAGTTCGGTCGCGAGAAAATCAGGAAGGTCAGTCg > 1:1451245/1‑150 (MQ=255) aTCGATTACAAACTGCATGACCAACCGCGCAGTTTCATCATCCGCCTGGAACGCCTGGACAATGCCGAGGCCT‑GGCATTGGGCAAGTTGTGATGCGGGCATTGGCATCATTCCCAAGTTCGGTCGCGAGAAAATCAGGAAGGTCAGTCgg < 1:1912925/150‑1 (MQ=255) tCGATTACAAACTGCATGACCAACCGCGCAGTTTCATCATCCGCCTGGAACGCCTGGACAATGCCGAGGCCT‑GGCATTGGGCAAGTTGTGATGCGGGCATTGGCATCATTCCCAAGTTCGGTCGCGAGAAAATCAGGAAGGTCAGTCGGc > 1:1283837/1‑150 (MQ=255) tCGATTACAAACTGCATGACCAACCGCGCAGTTTCATCATCCGCCTGGAACGCCTGGACAATGCCGAGGCCT‑GGCATTGGGCAAGTTGTGATGCGGGCATTGGCATCATTCCCAAGTTCGGTCGCGAGAAAATCAGGAAGGTCAGTCGGc < 1:1514574/150‑1 (MQ=255) aTTACAAACTGCATGACCAACCGCGCAGTTTCATCATCCGCCTGGAACGCCTGGACAATGCCGAGGCCT‑GGCATTGGGCAAGTTGTGATGCGGGCATTGGCATCATTCCCAAGTTCGGTCGCGAGAAAATCAGGaa > 2:1939665/1‑136 (MQ=255) aTTACAAACTGCATGACCAACCGCGCAGTTTCATCATCCGCCTGGAACGCCTGGACAATGCCGAGGCCT‑GGCATTGGGCAAGTTGTGATGCGGGCATTGGCATCATTCCCAAGTTCGGTCGCGAGAAAATCAGGaa < 1:1939665/136‑1 (MQ=255) aaaCTGCATGACCAAGAGCGCAGTTTGATCATCCGCCTGGAACGCCTGGACAATGGCGGGGCCT‑GGCATTGGGCAAGTTGTGATGCGGGCATTGGCATCATTCCCAAGTTCGTTCGCGAGACAATCAGGAAGGTCAGTCGGCAGATCGcc > 2:826389/1‑150 (MQ=255) aaCTGCATGACCAACCGCGCAGTTTCATCATCCGCCTGGAACGCCTGGACAATGCCGAGGCCT‑GGCATTGGGCAAGTTGTGATGCGGGCATTGGcatc > 1:1801883/1‑98 (MQ=255) aaCTGCATGACCAACCGCGCAGTTTCATCATCCGCCTGGAACGCCTGGACAATGCCGAGGCCT‑GGCATTGGGCAAGTTGTGATGCGGGCATTGGcatc < 2:1801883/98‑1 (MQ=255) aaCTGCATGACCAACCGCGCAGTTTCATCATCCGCCTGGAACGCCTGGACAATGCCGAGGCCT‑GGCATTGGGCAAGTTGTGATGCGGGCATTGGCATCATTCCCAAGTTCGGTCGCGAGAAAATCAGGAAGGTCAGTCGGCCGATGGCCg > 2:2284313/1‑150 (MQ=255) aCTGCATGACCAACCGCGCAGTTTCATCATCCGCCTGGAACGCCTGGACAATGCCGAGGCCT‑GGCATTGGGCAAGTTGTGATGCGGGCATTGGCATCATTCCCAAGTTc < 1:1192280/109‑1 (MQ=255) aCTGCATGACCAACCGCGCAGTTTCATCATCCGCCTGGAACGCCTGGACAATGCCGAGGCCT‑GGCATTGGGCAAGTTGTGATGCGGGCATTGGCATCATTCCCAAGTTc > 2:1192280/1‑109 (MQ=255) cTGCATGACCAACCGCGCAGTTTCATCATCCGCCTGGAACGCCTGGACAATGCCGAGGCCT‑GGCATTGGGCAAGTTGTGATGCGGGCATTGGCATCATTCCCAAGTTCGGTCGCGAGAAAATCAGGaa > 1:32401/1‑128 (MQ=255) cTGCATGACCAACCGCGCAGTTTCATCATCCGCCTGGAACGCCTGGACAATGCCGAGGCCT‑GGCATTGGGCAAGTTGTGATGCGGGCATTGGCATCATTCCCAAGTTCGGTCGCGAGAAAATCAGGaa < 2:32401/128‑1 (MQ=255) cTGCATGACCAACCGCGCAGTTTCATCATCCGCCTGGAACGCCTGGACAATGCCGAGGCCT‑GGCATTGGGCAAGTTGTGATGCGGGCATTGGCATCATTCCCAAGTTCGGTCGCGAGAAAATCAGGAAGGTCAGTCGGCCGATGGCCGAg > 1:399901/1‑150 (MQ=255) tGCATGACCAACCGCGCAGTTTCCTCATCCGCCTGGGTCGCCTTGACAATGCCGAGGCCT‑GGCATTGGGCAAGTTGTTATGCGGGCATTGGCATCATTCCCAAGTTCGGTCGCGAGAAAATCAGGAAGGTCAGTCGGCCGATGGCCGAGc < 1:2338980/150‑1 (MQ=255) tGCATGACCAACCGCGCAGTTTCATCATCCGCCTGGAACGCCTGGACAATGCCGAGGCCT‑GGCATTGGGCAAGTTGTGATGCGGGCATTGGCATCATTCCCAAGTTCGGTCGCGAGAAAATCAGGAAGGTCAGTCGGCCGATGGCCGAGc > 2:1628840/1‑150 (MQ=255) aTGACCAACCGCGCAGTTTCATCATCCGCCTGGAACGCCTGGACAATGCCGAGGCCT‑GGCATTGGGCaa > 1:1898534/1‑69 (MQ=255) aTGACCAACCGCGCAGTTTCATCATCCGCCTGGAACGCCTGGACAATGCCGAGGCCT‑GGCATTGGGCaa < 2:1898534/69‑1 (MQ=255) tGACCAACCGCGCAGTTTCATCATCCGCCTGGAACGCCTGGACAATGCCGAGGCCT‑GGCATTGGGCAAGTTGTGATGCGGGCATTGGCATCATTCCCAAGTTCGGTCGCGAGAAAATCAGGAAGGTCAGTCGGCCGATGGCCGAGCGTTa > 2:1454455/1‑150 (MQ=255) cAACCGCGCAGTTTCATCATCCGCCTGGAACGCCTGGACAATGCCGAGGCCT‑GGCATTGGGCAAGTTGTGATGCGGGCATTGGCATCATTCCCAAGTTCGGTCGCGAGAAAATCAGGAAGGTCAGTCGGCCGATGGCCGAGCGTTACGGc > 2:2223623/1‑150 (MQ=255) aaCCGCGCAGTTTCATCATCCGCCTGGAACGCCTGGACAATGCCGAGGCCT‑GGCATTGGGCAAGTTGTGATGCGGGCATTGGCATCATTCCCAAGTTCGGTCGCGAGAAAATCAGGAAGGTCAGTCGGCCGATGGCCGAGCGTTACGGCa > 2:802382/1‑150 (MQ=255) gcgcAGTTTCATCATCCGCCTGGAACGCCTGGACAATGCCGAGGCCT‑GGCATTGGGCAAGTTGTGATGCGGGCATTGGCATCATTCCCAAGTTCGGTCGCGAGAAAATCAGGAAGGTCAGTCGGCCGATGGCCGAGCGTTACGGCATTAc > 2:1979467/1‑150 (MQ=255) cAGTTTCATCATCCGCCTGGAACGCCTGGACAATGCCGAGGCCT‑GGCATTGGGCAAGTTGTGATGCGGGCATTGGCATCATTCCCAAGTTCGGTCGCGAGAAAATCAGGAAGGTCAGTCGGCCGATGGCCGAGCGTTACGGCATTAccgc < 1:1454455/150‑1 (MQ=255) tttCATCATCCGCCTGGAACGCCTGGACAATGCCGAGGCCT‑GGCATTGGGCAAGTTGTGATGCGGGCATTGGCATCATTCCCAAGTTCGGTCGCGAGAAAATCAGGAAGGTCAGTCGGCCGATGGCCGAGCGTTACGGCATTACCGCCGt < 1:802382/150‑1 (MQ=255) tcatcaTCCGCCTGGAACGCCTGGACAATGCCGAGGCCT‑GGCATTGGGCAAGTTGTGATGCGGGCATTGGCATCATTCCCAAGTTCGGTCGCGAGAAAATCAGGAAGGTCAGTCGGCCGATGGCCGAGCGTTACGGCATTACCGCCGt < 2:1187423/148‑1 (MQ=255) tcatcaTCCGCCTGGAACGCCTGGACAATGCCGAGGCCT‑GGCATTGGGCAAGTTGTGATGCGGGCATTGGCATCATTCCCAAGTTCGGTCGCGAGAAAATCAGGAAGGTCAGTCGGCCGATGGCCGAGCGTTACGGCATTACCGCCGt > 1:1187423/1‑148 (MQ=255) tcatcCGCCTGGAACGCCTGGACAATGCCGAGGCCT‑GGCATTGGGCAAGTTGTGATGCGGGCATTGGCATCATTCCCAAGTTCGGTCGCGAGAAAATCAGGAAGGTCAGt > 2:500369/1‑110 (MQ=255) tcatcCGCCTGGAACGCCTGGACAATGCCGAGGCCT‑GGCATTGGGCAAGTTGTGATGCGGGCATTGGCATCATTCCCAAGTTCGGTCGCGAGAAAATCAGGAAGGTCAGt < 1:500369/110‑1 (MQ=255) tcCGCCTGGAACGCCTGGACAATGCCGAGGCCT‑GGCATTGGGCAAGTTGTGATGCGGGCATTGGCATCATTCCCAAGTTCGGTCGCGAGAAAATCAGGAAGGTCAGTCGGCCGATGGCCGAGCGTTACGGCATTACCGCCGTGAGCTGGc > 1:917056/1‑150 (MQ=255) tcCGCCTGGAACGCCTGGACAATGCCGAGGCCT‑GGCATTGGGCAAGTTGTGATGCGGGCATTGGCATCATTCCCAAGTTCGGTCGCGAGAAAATCAGGAAGGTCAGTCGGCCGATGGCCGAGCGTTACGGCATTACCGCCGTGAGCTGGc < 1:1979467/150‑1 (MQ=255) tcCGCCTGGAACGCCTGGACAATGCCGAGGCCT‑GGCATTGGGCAAGTTGTGATGCGGGCATTGGCATCATTCCCAAGTTCGGTCGCGAGAAAATCAGGAAGGTCAGTCGGCCGATGGCCGAGCGTTACGGCATTACCGCCGTGAGCTGGc > 2:1579022/1‑150 (MQ=255) gAACGCCTGGACAATGCCGAGGCCT‑GGCATTGGGCAAGTTGTGATGCGGGCATTGGCATCATTCCCAAGTTCGGTCGCGAGAAAATCAGGAAGGTCAGTCGGCCGATGGCCGAGCGTTACGGCATTACCGCCGTGAGCTGGCGGATTTCg < 2:1334759/150‑1 (MQ=255) aaCGCCTGGACAATGCCGAGGCCT‑GGCATTGGGCAAGTTGTGATGCGGGCATTGGCATCATTCCCAAGTTCGGTCGCGAGAAAATCAGGAAGGTCAGTCGGCCGATGGCCGAGCGTTACGGCATTACCGCCGTGAGCTGGCGGATTTCgg < 2:971114/150‑1 (MQ=255) aaCGCCTGGACAATGCCGAGGCCT‑GGCATTGGGCAAGTTGTGATGCGGGCATTGGCATCATTCCCAAGTTCGGTCGCGAGAAAATCAGGAAGGTCAGTCGGCCGATGGCCGAGCGTTACGGCATTACCGCCGTGAGCTGGCGGATTTCgg < 2:1548780/150‑1 (MQ=255) aaCGCCTGGACAATGCCGAGGCCT‑GGCATTGGGCAAGTTGTGATGCGGGCATTGGCATCATTCCCAAGTTCGGTCGCGAGAAAATCAGGAAGGTCAGTCGGCCGATGGCCGAGCGTTACGGCATTACCGCCGTGAGCTGGCGGATTTCgg < 1:1579022/150‑1 (MQ=255) aCGCCTGGACAATGCCGAGGCCT‑GGCATTGGGCAAGTTGTGATGCGGGCATTGGCATCATTCCCAAGTTCGGTCGCGAGAAAATCAGGAAGGTCAGTCGGCCGATGGCCGAGCGTTACGGCATTACCGCCGTGAGCTGGCGGATTTCggg < 1:1628840/150‑1 (MQ=255) cGCCTGGACAATGCCGAGGCCT‑GGCATTGGGCAAGTTGTGATGCGGGCATTGGCATCATTCCCAAGTTCGGTCGCGAGAAAATCAGGAAGGTCAGTCGGCCGATGGCCGAGCGTTACGGCATTACCGCCGTGAGCTGGCGGATTTCgggg < 1:1156646/150‑1 (MQ=255) cTGGACAATGCCGAGGCCT‑GGCATTGGGCAAGTTGTGATGCGGGCATTGGCATCATTCCCAAGTTCGGTCGCGAGAAAATCAGGAAGGTCAGTCGGCCGATGGCCGAGCGTTACGGCATTAccgcc > 2:912823/1‑126 (MQ=255) cTGGACAATGCCGAGGCCT‑GGCATTGGGCAAGTTGTGATGCGGGCATTGGCATCATTCCCAAGTTCGGTCGCGAGAAAATCAGGAAGGTCAGTCGGCCGATGGCCGAGCGTTACGGCATTAccgcc < 1:912823/126‑1 (MQ=255) cTGGACAATGCCGAGGCCT‑GGCATTGGGCAAGTTGTGATGCGGGCATTGGCATCATTCCCAAGTTCGGTCGCGAGAAAATCAGGAAGGTCAGTCGGCCGATGGCCGAGCGTTACGGCATTACCGCCGTGAGCTGGCGGATTTCGGGGAGc > 1:591118/1‑150 (MQ=255) gACAATGCCGAGGCCT‑GGCATTGGGCAAGTTGTGATGCGGGCATTGGCATCATTCCCAAGTTCGGTCGCGAGAAAATCAGGAAGGTCAGTCGGCCGATGGCCGAGCGTTACGGCATTACCGCCGTGAGCTGGCGGATTTCGGGGAGCAAg < 2:917056/150‑1 (MQ=255) ccAATGCC‑AGGCCTCGGCATTGGGCAAGTTGTGATGCGGGCATTGGCATCATTCCCAAGTTCGGTCGCGAGAAAATCAGGAAGGTCAGTCGGCCGATGGCCGAGCGTTACGGCATTACCGCCGTGAGCTGGCGGATTTCg < 2:1802909/139‑1 (MQ=255) ccAATGCC‑AGGCCTCGGCATTGGGCAAGTTGTGATGCGGGCATTGGCATCATTCCCAAGTTCGGTCGCGAGAAAATCAGGAAGGTCAGTCGGCCGATGGCCGAGCGTTACGGCATTACCGCCGTGAGCTGGCGGATGTCg > 1:1802909/2‑140 (MQ=255) aaTGCCGAGGCCT‑GGCATTGGGCAAGTTGTGATGCGGGCATTGGCATCATTCCCAAGTTCGGTCGCGAGAAAATCAGGAAGGTCAGTCGGCCGATGGCCGAGCGTTACGGCATTACCGCCGTGAGCTGGCGGATTTCGGGGAGCAAGccc > 2:1840168/1‑150 (MQ=255) aaTGCCGAGGCCT‑GGCATTGGGCAAGTTGTGATGCGGGCATTGGCATCATTCCCAAGTTCGGTCGCGAGAAAATCAGGAAGGTCAGTCGGCCGATGGCCGAGCGTTACGGCATTACCGCCGTGAGCTGGCGGATTTCGGGGAGCAAGccc > 2:1246456/1‑150 (MQ=255) gCCGAGGCCT‑GGCATTGGGCAAGTTGTGATGCGGGCATTGGCATCATTCCCAAGTTCGGTCGCGAGAAAATCAGGAAGGTCAGTCGGCCGATGGCCGAGCGTTACGGCATTACCGCCGTGAGCTGGCGGATTTCGGGGAGCAAGCCCAAc < 1:106232/150‑1 (MQ=255) cGAGGCCT‑GGCATTGGGCAAGTTGTGATGCGGGCATTGGCATCATTCCCAAGTTCGGTCGCGAGAAAATCAGGAAGGTCAGTCGGCCGATGGCCGAGCGTTACGGCATTACCGCCGt < 1:1916801/117‑1 (MQ=255) cGAGGCCT‑GGCATTGGGCAAGTTGTGATGCGGGCATTGGCATCATTCCCAAGTTCGGTCGCGAGAAAATCAGGAAGGTCAGTCGGCCGATGGCCGAGCGTTACGGCATTACCGCCGt > 2:1916801/1‑117 (MQ=255) cGAGGCCT‑GGCATTGGGCAAGTTGTGATGCGGGCATTGGCATCATTCCCAAGTTCGGTCGCGAGAAAATCAGGAAGGTCAGTCGGCCGATGGCCGAGCGTTACGGCATTACCGCCGTGAGCTGGCGGATTTCGGGGa > 1:1179363/1‑137 (MQ=255) cGAGGCCT‑GGCATTGGGCAAGTTGTGATGCGGGCATTGGCATCATTCCCAAGTTCGGTCGCGAGAAAATCAGGAAGGTCAGTCGGCCGATGGCCGAGCGTTACGGCATTACCGCCGTGAGCTGGCGGATTTCGGGGa < 2:1179363/137‑1 (MQ=255) t‑GGCATTGGGCAAGTTTTGATGCGGGCATTGGCATCATTCCCAATTTCGGTCGCGAGAAAATCAGGAAGGTCAGTCGGCCGATGGCCGAGCGTTACGGCATTACCGCCGTGAGCTGGCGGATTTCGGGGAGCAAGCCCAACCAGTCGGTg < 1:342707/150‑1 (MQ=255) t‑GGCATTGGGCAAGTTGTGATGCGGGCATTGGCATCATTCCCAAGTTCGGTCGCGAGAAAATCAGGAAGGTCAGTCGGCCGATGGCCGAGCGTTACGGCATTACCGCCGTGAGCTGGCGGATTTCGGGGa < 2:147514/130‑1 (MQ=255) t‑GGCATTGGGCAAGTTGTGATGCGGGCATTGGCATCATTCCCAAGTTCGGTCGCGAGAAAATCAGGAAGGTCAGTCGGCCGATGGCCGAGCGTTACGGCACTTCCGCCGTGAGCTGGCGGATTTCGGGGa > 1:147514/1‑130 (MQ=255) | CCACCGCCCGATCAATCAAAATGTCATCCATGGAGAAGAGGAGGCCCCCTGCGATGCCTAGCCCACAGCTGTACATAATCGATTACAAACTGCATGACCAACCGCGCAGTTTCATCATCCGCCTGGAACGCCTGGACAATGCCGAGGCCT‑GGCATTGGGCAAGTTGTGATGCGGGCATTGGCATCATTCCCAAGTTCGGTCGCGAGAAAATCAGGAAGGTCAGTCGGCCGATGGCCGAGCGTTACGGCATTACCGCCGTGAGCTGGCGGATTTCGGGGAGCAAGCCCAACCAGTCGGTG > NC_002947/3703167‑3703465 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |