| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,726,860:1 | +G | 14.6% | coding (162/2574 nt) | opgH ← | glucans biosynthesis glucosyltransferase H |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,726,860 | 1 | . | G | 14.6% | 310.3 / 54.8 | 96 | coding (162/2574 nt) | opgH | glucans biosynthesis glucosyltransferase H |
| Reads supporting (aligned to +/- strand): ref base . (41/41); new base G (7/7); total (48/48) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.86e-01 | |||||||||||
TGCGCCATGGCTCGGGCACGACCTTGGTGCGTTTGATCGGCGGGGCGATCTTCAGGCACAGGCGGCCGCTGCCGTCGACGCCGAGCATTTCGGCTTCTTCCAGCTCGGCGGCGCTGCCCACGGTCAGGCGCGGGCCCACCGAGGCC‑TGCACGGCCTCGGCAGAGCTGGCGGCCGGGTTGGCCGCCAAGCGTTGGTGTAGCTCACTGAACGAGGTGCAGCTGGCAAGCTCAGCCCGCTGCTCGTCGCTCAGTGGTAGGTGGGCCAGGTACTCGCCAAGCGATTCCGGCCTTGCGCT > NC_002947/5726715‑5727009 | tGCGCCATGGCTCGGGCACGACCTTGGTGCGTTTGATCGGCGGGGCGATCTTCAGGCACAGGCGGCCGCTGCCGTCGACGCCGAGCATTTCGGCTTCTTCCAGCTCGGCGGCGCTGCCCACGGTCAGGCGCGGGCCCACCGAGGCC‑TGCa < 1:299476/150‑1 (MQ=255) cgcCATGGCTCGGGCACGACCTTGGTGCGTTTGATCGGCGGGGCGATCTTCAGGCACAGGCGGCCGCTGCCGTCGACGCCGAGCATTTCGGCTTCTTCCAGCTCGGCGGCGCTGCCCACGGTCAGGCGCGGGCCCACCGAGGCC‑TGCACg < 1:2313477/150‑1 (MQ=255) gcCATGGCTCGGGCACGACCTTGGTGCGTTTGATCGGCGGGGCGATCTTCAGGCACAGGCGGCCGCTGCCGTCGACGCCGAGCATTTCGGCTTCTTCCAGCTCGGCGGCGCTGCCCACGGTCAGGCGCGGGCCCACCGAGGCC‑TGCACgg > 2:1708685/1‑150 (MQ=255) ccATGGCTCGGGCACGACCTTGGTGCGTTTGATCGGCGGGGCGATCTTCAGGCACAGGCGGCCGCTGCCGTCGACGCCGAGCATTTCGGCTTCTTCCAGCTCGGCGGCGCTGCCCACGGTCAGGCGCGGGCCCACCGAGGCC‑TGCACGGc > 2:2354640/1‑150 (MQ=255) aTGGCTCGGGCACGACCTTGGTGCGTTTGATCGGCGGGGCGATCTTCAGGCACAGGCGGCCGCTGCCGTCGACGCCGAGCATTTCGGCTTCTTCCAGCTCGGCGGCGCTGCCCACGGTCAGGCGCGGGCCCACCGAGGCC‑TGCACGGc > 2:219160/1‑148 (MQ=255) aTGGCTCGGGCACGACCTTGGTGCGTTTGATCGGCGGGGCGATCTTCAGGCACAGGCGGCCGCTGCCGTCGACGCCGAGCATTTCGGCTTCTTCCAGCTCGGCGGCGCTGCCCACGGTCAGGCGCGGGCCCACCGAGGCC‑TGCACGGc < 1:219160/148‑1 (MQ=255) tCGGGCACGACCTTGGTGCGTTTGATCGGCGGGGCGTTCTTGAGGCACAGGCGGCCGCTGCCGTCGACGCCGAGCATTTCGGCTTCTTCCAGCTCGGCGGCGCTGCCCACGGTCAGGCGCGGGCCCACCGAGGCC‑TGCACGGCCTCGGCa > 1:194102/1‑150 (MQ=255) tCGGGCACGACCTTGGTGCGTTTGATCGGCGGGGCGATCTTCAGGCACAGGCGGCCGCTGCCGTCGACGCCGAGCATTTCGGCTTCTTCCAGCTCGGCGGCGCTGCCCACGGTCAGGCGCGGGCCCACCGAGGCCGTGCA‑GGCCTCggtg < 2:318530/150‑3 (MQ=255) tCGGGCACGACCTTGGTGCGTTTGATCGGCGGGGCGATCTTCAGGCACAGGCGGCCGCTGCCGTCGACGCCGAGCATTTCGGCTTCTTCCAGCTCGGCGGCGCTGCCCACGGTCAGGCGCGGGCCCACCGAGGCC‑TGCACGGCCTCGGCa > 2:1325451/1‑150 (MQ=255) tCGGGCACGACCTTGGTGCGTTTGATCGGCGGGGCGATCTTCAGGCACAGGCGGCCGCTGCCGTCGACGCCGAGCATTTCGGCTTCTTCCAGCTCGGCGGCGCTGCCCACGGTCAGGCGCGGGCCCACCGAGGCC‑TGCACGGCCTCGGCa > 1:90051/1‑150 (MQ=255) cGGGCACGACCTTGGTGCGTTTGATCGGCGGGGCGATCTTCAGGCACAGGCGGCCGCTGCCGTCGACGCCGAGCATTTCGGCTTCTTCCAGCTCGGCGGCGCTGCCCACGGTCAGGCGCGGGCCCACCGAGGCCGTGCA‑GGCCTCggtgg < 1:580247/150‑4 (MQ=255) cGGGCACGACCTTGGTGCGTTTGATCGGCGGGGCGATCTTCAGGCACAGGCGGCCGCTGCCGTCGACGCCGAGCATTTCGGCTTCTTCCAGCGCGGCGGCGCTGCCCACGGTCAGGCGCGGGCCCACCGAGGCCGTGCA‑GGCCTCggtgg < 1:16184/150‑4 (MQ=255) gCACGACCTTGGTGCGTTTGATCGGCGGGGCGATCTTCAGGCACAGGCGGCCGCTGCCGTCGACGCCGAGCATTTCGGCTTCTTCCAGCTCGGCGGCGCTGCCCACGGTCAGGCGCGGGCCCACCGAGGCC‑TGCACGGCCTCGGCAGAGc > 2:1793931/1‑150 (MQ=255) gACCTTGGTGCGTTTGATCGGCGGGGCGATCTTCAGGCACAGGCGGCCGCTGCCGTCGACGCCGAGCATTTCGGCTTCTTCCAGCTCGGCGGCGCTGCCCACGGTCAGGCGCGGGCCCACCGAGGCC‑Tg > 2:315943/1‑129 (MQ=255) gACCTTGGTGCGTTTGATCGGCGGGGCGATCTTCAGGCACAGGCGGCCGCTGCCGTCGACGCCGAGCATTTCGGCTTCTTCCAGCTCGGCGGCGCTGCCCACGGTCAGGCGCGGGCCCACCGAGGCC‑Tg < 1:315943/129‑1 (MQ=255) gACCTTGGTGCGTTTGATCGGCGGGGCGATATTAAGGCCCAATCGGCCGCTACCGTCGTCACTTAGCATTTCGGCTTCTTCCAGCTCGGCGGCGCTGCCCACGGTCAGGCGCGGGCCCACCGAGGCC‑TGCACGGCCTCGGCAGAGCTggc > 2:84053/1‑150 (MQ=255) gTGCGTTTGATCGGCGGGGCGATCTTCAGGCACAGGCGGCCGCTGCCGTCGACGCCGAGCATTTCGGCTTCTTCCAGCTCGGCGGCGCTGCCCACGGTCAGGCGCGGGCCCACCGAGGCC‑TGCACGGCCTCGGCAGAGCTGGCGGCCggg < 1:445333/150‑1 (MQ=255) gCGTTTGATCGGCGGGGCGATCTTCAGGCACAGGCGGCCGCTGCCGTCGACGCCGAGCATTTCGGCTTCTTCCAGCTCGGCGGCGCTGCCCACGGTCAGGCGCGGGCCCACCGAGGCC‑TGCACGGCCTCGGCAGAGCTGGCGGCCGGGtt < 2:1391582/150‑1 (MQ=255) tttGATCGGCGGGGCGATCTTCAGGCACAGGCGGCCGCTGCCGTNGACGCCGAGCATTTCGGCTTCTTCCAGCACAAGTGCGCTGCCCACGGTCAGGCGCCGGCCGACCGAGGCC‑TGCACGGCCTCGGCAGAGCTGGCGGCCGGGGTgac > 1:162735/1‑148 (MQ=255) tttGATCGGCGGGGCGATCTTCAGGCACAGGCGGCCGCTGCCGTCGACGCCGAGCATTTCGGCTTCTTCCAGCTCGGCGGCGCTGCCCACGGTCAGGCGCGGGCCCACCGAGGCC‑TGCACGGCCTCGGCAGAGCTGGCGGCCGGGTTGgc < 2:90051/150‑1 (MQ=255) tttGATCGGCGGGGCGATCTTCAGGCACAGGCGGCCGCTGCCGTCGACGCCGAGCATTTCGGCTTCTTCCAGCTCGGCGGCGCTGCCCACGGTCAGGCGCGGGCCCACCGAGGCC‑TGCACGGCCTCGGCAGAGCTGGCGGCCGGGTTGgc > 2:1218635/1‑150 (MQ=255) tttGATCGGCGGGGCGATCTTCAGGCACAGGCGGCCGCTGCCGTCGACGCCGAGCATTTCGGCTTCTTCCAGCTCGGCGGCGCTGCCCACGGTCAGGCGCGGGCCCACCGAGGCC‑TGCACGGCCTCGGCAGAGCTGGCGGCCGGGTTGgc < 2:206404/150‑1 (MQ=255) gATCGGCGGGGCGATCTTCAGGCACAGGCGGCCGCTGCCGTCGACGCCGAGCATTTCGGCTTCTTCCAGCTCGGCGGCGTCACCCCCGGATAGATCCCGGCCTACCGAGGCC‑TGCACGGCCTCGGCAGAGCTGGCGGCCGGGTTGgccgc < 1:1499878/150‑1 (MQ=255) tCGGCGGGGCGATCTTCAGGCACAGGCGGCCGCTGCCGTCGACGCCGAGCATTTCCGCTTCTTCCAGCTCGGCCGCGCGGCCCGCGGTCAGGCGCGGGCCCACCGAGGCC‑TGCACGGCCTCGGCAGAGCTGGCGGCCGGGTTGGCCGCCa > 1:1498143/1‑150 (MQ=255) cggcggGGCGATCTTCAGGCACAGGCGGCCGCTGCCGTCGACGCCGAGCATTTCGGCTTCTTCCAGCTCGGCGGCGCTGCCCACGGTCGGTCGCGGGCCCACCGAGGCC‑TGCACGGCCTCGGCAGAGCTGGCGGCCGGGTTGGCCGCCaa < 2:2286431/150‑1 (MQ=255) ggggCGATCTTCAGGCACAGGCGGCCGCTGCCGTCGACGCCGAGCATTTCGGCTTCTTCCAGCTCGGCGGCGCTGCCCACGGTCAGGCGCGGGCCCACCGAGGCC‑TGCACGGCCTCGGCaga > 1:731906/1‑122 (MQ=255) ggggCGATCTTCAGGCACAGGCGGCCGCTGCCGTCGACGCCGAGCATTTCGGCTTCTTCCAGCTCGGCGGCGCTGCCCACGGTCAGGCGCGGGCCCACCGAGGCC‑TGCACGGCCTCGGCaga < 2:731906/122‑1 (MQ=255) ggCGATCTTCAGGCACAGGCGGCCGCTGCCGTCGACGCCGAGCATTTCGGCTTCTTCCAGCTCGGCGGCGCTGCCCACGGTCAGGCGCGGGCCCACCGAGGCC‑TGCACGGCCTCGGCAGAGCTGGCGGCCGGGTTGGCCGCCAAGCGTTg < 2:1987058/150‑1 (MQ=255) gCGATCTTCAGGCACAGGCGGCCGCTGCCGTCGACGCCGAGCATTTCGGCTTCTTCCAGCTCGGCGGCGCTGCCCACGGTCAGGCGCGGGCCCACCGAGGCC‑TGCACGGCCTCGGCAGAGCTGGCGGCCGGGTTGGCCGGCAAGCGTTgg > 1:841632/1‑150 (MQ=255) gCGATCTTCAGGCACAGGCGGCCGCTGCCGTCGACGCCGAGCATTTCGGCTTCTTCCAGCTCGGCGGCGCTGCCCACGGTCAGGCGCGGGCCCACCGAGGCC‑TGCACGGCCTCGGCAGAGCTGGCGGCCGGGTTGGCCGCCAAGCGTTgg < 1:2354640/150‑1 (MQ=255) gCGATCTTCAGGCACAGGCGGCCGCTGCCGTCGACGCCGAGCATTTCGGCTTCTTCCAGCTCGGCGGCGCTGCCCACGGTCAGGCGCGGGCCCACCGAGGCC‑TGCACGGCCTCGGCAGAGCTGGCGGCCGGGTTGGCCGCCAAGCGTTgg > 1:841606/1‑150 (MQ=255) aTCTTCAGGCACAGGCGGCCGCTGCCGTCGACGCCGAGCATTTCGGCTTCTTCCAGCTCGGCGGCGCTGCCCACGGTCAGGCGCGGGCCCACCGAGGCC‑TGCACGGCCTCGGCAGAGCTGGCGGCCGGGTTGGCCGCCAAGCGTTGgtgt < 1:1708685/150‑1 (MQ=255) aTCTTCAGGCACAGGCGGCCGCTGCCGTCGACGCCGAGCATTTCGGCTTCTTCCAGCTCGGCGGCGCTGCCCACGGTCAGGCGCGGGCCCACCGAGGCC‑TGCACGGCCTCGGCAGAGCTGGCGGCCGGGTTGGCCGCCAAGCGTTGgtgt > 2:450638/1‑150 (MQ=255) tCTTCAGGCACAGGCGGCCGCTGCCGTCGGCGCCGAACATTTCGGCTTCTTCCAGCTCGGCGGCGCTGCCCACGGTCAGGCGCGGGCCCACCGAGGCC‑TGCACGGCCTCGGCAGAGCTGGCGGCCGGGTTGGCCGCCAAGCGTTGGTGTa < 2:194102/150‑1 (MQ=255) tCTTCAGGCACAGGCGGCCGCTGCCGTCGACGCCGAGCATTTCGGCTTCTTCCAGCTCGGCGGCGCTGCCCACGGTCAGGCGCGGGCCCACCGAGGCC‑TGCACGGCCTCGGCAGAGCTGGCGGCCGGGTTGGCCGCCAAGCGTTGgt > 1:1753722/1‑147 (MQ=255) tCTTCAGGCACAGGCGGCCGCTGCCGTCGACGCCGAGCATTTCGGCTTCTTCCAGCTCGGCGGCGCTGCCCACGGTCAGGCGCGGGCCCACCGAGGCC‑TGCACGGCCTCGGCAGAGCTGGCGGCCGGGTTGGCCGCCAAGCGTTGgt < 2:1753722/147‑1 (MQ=255) taaGGCACAGGCGGCCTCTGCCTTCGACGCCGAGCAGTTCGGCTGCTTCCAGCTCGGCGGCGCTGCCCACGGTCAGGCGCGGGCCCACCGAGGCC‑TGCACGGCCTCGGCAGAGCTGGCGGCCGGGTTGGCCGCCAAGCGTTGGTGTAGCt > 2:1955185/3‑150 (MQ=255) aGGCACAGGCGGCCGCTGCCGTCGACGCCGAGCATTTCGGCTTCTTCCAGCTCGGCGGCGCTGCCCACGGTCAGGCGCGGGCCCGCCGAGGCCGTGCA‑GGCCTCggtgg > 1:1821286/1‑106 (MQ=255) aGGCACAGGCGGCCGCTGCCGTCGACGCCGAGCATTTCGGCTTCTTCCAGCTCGGCGGCGCTGCCCACGGTCAGGCGCGGGCCCGCCGAGGCCGTGCA‑GGCCTCggtgg < 2:1821286/109‑4 (MQ=255) aGGCACAGGCGGCCGCTGCCGTCGACGCCGAGCATTTCGGCTTCTTCCAGCTCGGCGGCGCTGCCCACGGTCAGGCGCGGGCCCACCGAGGCC‑TGCACGGCCTCGGCAGAGCTGGCGGCCGGGTTGGCCGCCAAGCGTTGGTGTAGCTCa > 2:1283050/1‑150 (MQ=255) aGGCACAGGCGGCCGCTGCCGTCGACGCCGAGCATTTCGGCTTCTTCCAGCTCGGCGGCGCTGCCCACGGTCAGGCGCGGGCCCACCGAGGCC‑TGCACGGCCTCGGCAGAGCTGGCGGCCGGGTTGGCCGCCAAGCGTTGGTGTAGCTCa > 1:1355360/1‑150 (MQ=255) aGGCACAGGCGGCCGCTGCCGTCGACGCCGAGCATTTCGGCTTCTTCCAGCTCGGCGGCGCTGCCCACGGTCAGGCGCGGGCCCACCGAGGCC‑TGCACGGCCTCGGCAGAGCTGGCGGCCGGGTTGGCCGCCAAGCGTTGGTGTAGCTCa > 2:730711/1‑150 (MQ=255) gCACAGGCGGTCGCTGCCGTCGACGCCGAGCATTTCGGCTTCTTCCAGCTCGGCGGCGCTGCCCACGGTCAGGCGCGGGCCCACCGAGGCC‑TGCACGGCCTCGGCAGAGCTGGCGGCCGGGTTGGCCGCCAAGCGTTGGTGTAGCTCACt > 1:247015/1‑150 (MQ=255) aGGCGGCCGCTGCCGTCGACGCCGAGCATTTCGGCTTCTTCCAGCTCGGCGGCGCTGCCCACGGTCAGGCGCGGGCCCACCGAGGCCGTGCA‑GGCCTCggtgg < 2:431980/103‑4 (MQ=255) aGGCGGCCGCTGCCGTCGACGCCGAGCATTTCGGCTTCTTCCAGCTCGGCGGCGCTGCCCACGGTCAGGCGCGGGCCCACCGAGGCCGTGCA‑GGCCTCggtgg > 1:431980/1‑100 (MQ=255) aGGCGGCCGCTGCCGTCGACGCCGAGCATTTCGGCTTCTTCCAGCTCGGCGGCGCTGCCCACGGTCAGGCGCGGGCCCACCGAGGCC‑TGCACGGCCTCGGCAGAGCTGGCGGCCGGGTTGGCCGCCAAGCGTTGGTGTAGCTCACTGAAc < 2:162735/150‑1 (MQ=255) aGGCGGCCGCTGCCGTCGACGCCGAGCATTTCGGCTTCTTCCAGCTCGGCGGCGCTGCCCACGGTCAGGCGCGGGCCCACCGAGGCC‑TGCACGGCCTCGGCAGAGCTGGCGGCCGGGTTGGCCGCCAAGCGTTGGTGTAGCTCACTGAAc > 2:589709/1‑150 (MQ=255) aGGCGGCCGCTGCCGTCGACGCCGAGCATTTCGGCTTCTTCCAGCTCGGCGGCGCTGCCCACGGTCAGGCGCGGGCCCACCGAGGCC‑TGCACGGCCTCGGCAGAGCTGGCGGCCGGGTTGGCCGCCAAGCGTTGGTGTAGCTCACTGAAc < 1:1283050/150‑1 (MQ=255) aGGCGGCCGCTGCCGTCGACGCCGAGCATTTCGGCTGCTTCCAGCTCGGCGGCGCTGCCCACGGTCAGGCGCGGGCCCACCGAGGCC‑TGCACGGCCTCGGCAGAGCTGGCGGCCGGGTTGGCCGCCAAGCGTTGGTGTAGCTCACTGAAc > 1:1770156/1‑150 (MQ=255) ggcCGCTGCCGTCGATGCCGAGCATTTCGGCTTCTTCCAGCTCGGCGGCGCTGCCCACGGTCAGGCGCGGGCCCGCCGAGGCCGTGCA‑GGCCTCggtgggc > 2:2385804/1‑96 (MQ=37) ggcCGCTGCCGTCGATGCCGAGCATTTCGGCTTCTTCCAGCTCGGCGGCGCTGCCCACGGTCAGGCGCGGGCCCGCCGAGGCCGTGCA‑GGCCTCggtgggc < 1:2385804/101‑6 (MQ=37) cGCTGCCGTCGACGCCGAGCATTTCGGCTTCTTCCAGCTCGGCGGCGCTGCCCACGGTCAGGCGCGGGCCCACCGAGGCC‑TGCACGGCCTCGGCAGAGCTGGCGGCCGGGTCGGCCGCCAAGCGTTGGTGTAGCTCACTGAACGAGGTGc > 1:186524/1‑150 (MQ=255) tGCCGTCGACGCCGAGCATTTCGGCTTCTTCCAGCTCGGCGGCGCTGCCCACGGTCAGGCGCGGGCCCACCGAGGCC‑TGCACGGCCTCGGCAGAGCTGGCGGCCGGGTTGGCCGCCAAGCGTTGGTGTAGCTCACTGAACGAGGTGCAGc > 1:1064061/1‑150 (MQ=255) cGTCGACGCCGAGCATTTCGGCTTCTTCCAGCTCGGCGGCGCTGCCCACGGTCAGGCGCGGGCCCACCGAGGCC‑TGCACGGCCTCGGCAGAGCTGGCGGCCGGGTTGGCCGCCAAGCGTTGGTGTAGCTCACTGAACGAGGTGCAGCTgg < 1:948988/150‑1 (MQ=255) cGTCGACGCCGAGCATTTCGGCTTCTTCCAGCTCGGCGGCGCTGCCCACGGTCAGGCGCGGGCCCACCGAGGCC‑TGCACGGCCTCGGCAGAGCTGGCGGCCGGGTTGGCCGCCAAGCGTTGGTGTAGCTCACTGAACGAGGTGCAGCTgg < 2:1064061/150‑1 (MQ=255) gTCGACGCCGAGCATTTCGGCTTCTTCCAGCTCGGCGGCGCTGCCCACGGTCAGGCGCGGGCCCACCGAGGCC‑TGCACGGCCTCGGCAGAGCTGGCGGCCGGGTCGGCCGCCAAGCGTTGGTGTAGCTCACTGAACGAGGTGCAGCTGGc < 2:186524/150‑1 (MQ=255) gTCGACGCCGAGCATTTCGGCTTCTTCCAGCTCGGCGGCGCTGCCCACGGTCAGGCGCGGGCCCACCGAGGCC‑TGCAAGGCCTCGGCAGAGCTGGCGGCCGGGTTGGCCGCCAAGCGTTGGTGTAGCTCACTGAACGAGGTGCAGCTGGc > 1:769590/1‑150 (MQ=255) tCGACGCCGAGCATTTCGGCTTCTTCCAGCTCGGCGGCGCTGCCCACGGTCAGGCGCGGGCCCACCGAGGCC‑TGCACGGCCTCGGCAGAGCTGGCGGCCGGGTTGGCCGCCAAGCGTTGGTGTAGCTCACTGAACGAGGTGCAGCTGGCa > 1:415401/1‑150 (MQ=255) cGACGCCGAGCATTTCGGCTTCTTCCAGCTCGGCGGCGCTGCCCACGGTCAGGCGCGGGCCCACCGAGGCC‑TGCACGGCCTCGGCAGAGCTGGCGGCCGGGTTGGCCGCCAAGCGTTGGTGTAGCTCACTGAACGAGGTGCAGCTGGCaa < 1:1793931/150‑1 (MQ=255) cGACGCCGAGCATTTCGGCTTCTTCCAGCTCGGCGGCGCTGCCCACGGTCAGGCGCGGGCCCACCGAGGCC‑TGCACGGCCTCGGCAGAGCTGGCGGCCGGGTTGGCCGCCAAGCGTTGGTGTAGCTCACTGAACGAGGTGCAGCTGGCaa < 1:450638/150‑1 (MQ=255) cGACGCCGAGCATTTCGGCTTCTTCCAGCTCGGAGGCCCGGCCCACGGTCAGGCGCGGGCCCACCGAGGCC‑TGCACGGCCTCGGCAGAGCTGGCGGCCGGGTTGGCCGCCAAGCGTTGGTGTAGCTCACTGAACGAGGTGCAGCTGGCaa < 2:1770156/150‑1 (MQ=255) gCCGAGCATTTCGGCTTCTTCCAGCTCGGCGGCGCTGCCCACGGTCAGGCGCGGGCCCACCGAGGCC‑TGCACGGCCTCGGCAGAGCTGGCGGCCGGGTTGGCCGCCAAGCGTTGGTGTAGCTCACTGAACGAGGTGCAGCTGGCAAGCTc < 1:1218635/150‑1 (MQ=255) cGAGCATTTCGGCTTCTTCCAGCTCGGCGGCGCTGCCCACGGTCAGGCGCGGGCCCACCGAGGCC‑TGCACGGCCTCGGCAGAGCTGGCGGCCGGGTTGGCCGCCAAGCGTTGGTGTAg < 1:1287422/118‑1 (MQ=255) cGAGCATTTCGGCTTCTTCCAGCTCGGCGGCGCTGCCCACGGTCAGGCGCGGGCCCACCGAGGCC‑TGCACGGCCTCGGCAGAGCTGGCGGCCGGGTTGGCCGCCAAGCGTTGGTGTAg > 2:1287422/1‑118 (MQ=255) cGAGCATTTCGGCTTCTTCCAGCTCGGCGGCGCTGCCCACGGTCAGGCGCGGGCCCACCGAGGCC‑TGCACGGCCTCGGCAGAGCTGGCGGCCGGGTTGGCCGCCAAGCGTTGGTGTAGCTCACTGAACGAGGTGCAGCTGGCAAGCTCAg < 1:174315/150‑1 (MQ=255) cGAGCATTTCGGCTTCTTCCAGCTCGGCGGCGCTGCCCACGGTCAGGCGCGGGCCCACCGAGGCC‑TGCACGGCCTCGGCAGAGCTGGCGGCCGGGTTGGCCGCCAAGCGTTGGTGTAGCTCACTGAACGAGGTGCAGCTGGCAAGCTCAg > 2:41568/1‑150 (MQ=255) gAGCATTTCGGCTTCTTCCAGCTCGGCGGCGCTGCCCACGGTCAGGCGCGGGCCCACCGAGGCCGTGCA‑GGCCTCggt < 1:753135/78‑2 (MQ=38) gAGCATTTCGGCTTCTTCCAGCTCGGCGGCGCTGCCCACGGTCAGGCGCGGGCCCACCGAGGCCGTGCA‑GGCCTCggt > 2:753135/1‑77 (MQ=38) aTTTCGGCTTCTTCCAGCTCGGCGGCGCTGCCCACGGTCAGGCGCCGGCCCACCGAGGCC‑TGCACGGCCTCGGCAGAGCTGGCGGCCGGGTTGGCCGCCAAGCGTTGGTGTAGCTCACTGAACGAGGTGCAGCTGGCAAGCTCAGCCCgc < 1:1967753/150‑1 (MQ=255) tCGGCTTCTTCCAGCTCGGCGGCGCTGCCCACGGTCAGGCGCGGGCCCACCGAGGCC‑TGCACGGCCTCGGCAGAGCTGGCGGCCGGGTTGGCCGCCAAGCGTTGGTGTAGCTCACTGAACGAGGTGCAGCTGGCAAGCTCAGCCCgctgc < 2:1498143/150‑1 (MQ=255) ggCTTCTTCCAGCTCGGCGGCGCTGCCCACGGTCAGGCGCGGGCCCACCGAGGCC‑TGCACGGCCTCGGCAGAGCTGGCGGCCGGGTTGGCCGCCAAGCGTTGGTGTAGCTCACTGAACGAGGTGCAGCTGGCAAGCTCAGCCCGCTGCtc < 2:247015/150‑1 (MQ=255) ttcCAGCTCGGCGGCGCTGCCCACGGTCAGGCGCGGGCCCACCGAGGCC‑TGCACGGCCTCGGCAGAGCTGGCGGCCGGGTTGGCCGCCAAGCGTTGGTGTAGCTCACTGAACGAGGTGCAGCTGGCAAGCTCAGCCCgc > 1:2084042/1‑139 (MQ=255) ttcCAGCTCGGCGGCGCTGCCCACGGTCAGGCGCGGGCCCACCGAGGCC‑TGCACGGCCTCGGCAGAGCTGGCGGCCGGGTTGGCCGCCAAGCGTTGGTGTAGCTCACTGAACGAGGTGCAGCTGGCAAGCTCAGCCCgc < 2:2084042/139‑1 (MQ=255) ccAGCTCGGCGGCGCTGCCCACGGTCAGGCGCGGGCCCACCGAGGCC‑TGCACGGCCTCGGCAGAGCTGGCGGCCGGGTTGGCCGCCAAGCGTTGGTGTAGCTCACTGAACGAGGTGCAGCTGGCAAGCTCAGCCCGCTGCTCGTCGCTCa > 2:1279281/1‑150 (MQ=255) ggcggcGCTGCCCACGGTCAGGCGCGGGCCCACCGAGGCC‑TGCACGGCCTCGGCAGAGCTGGCGGCCGGGTTGGCCGCCAAGCGTTGGTGTAGCTCACTGAACGAGGTGCAGCTGGCAAGCTCAGCCCGCTGCtcgtc > 1:1490450/1‑138 (MQ=255) ggcggcGCTGCCCACGGTCAGGCGCGGGCCCACCGAGGCC‑TGCACGGCCTCGGCAGAGCTGGCGGCCGGGTTGGCCGCCAAGCGTTGGTGTAGCTCACTGAACGAGGTGCAGCTGGCAAGCTCAGCCCGCTGCtcgtc < 2:1490450/138‑1 (MQ=255) ggcgCTGCCCACGGTCAGGCGCGGGCCCACCGAGGCC‑TGCACGGCCTCGGCAGAGCTGGCGGCCGGGTTGGCCGCCAAGCGTTGGTGTAGCTAACTGAACGAGGTGCAGCTGGCAAGCTCAGCCCGCTGCTCGTCGCTCAGTGGTacttc < 1:84053/150‑5 (MQ=255) cgcTGCCCACGGTCAGGCGCGGGCCCACCGAGGCC‑TGCACGGCCTCGGCAGAGCTGGCGGCCGGGTTGGCCGCCAAGCGTTGGTGTAGCTCGCTGAACGAGGTGCAGCTGGCAAGCTCAGCCCGCTGCTCGTCGCTCAGTGGTAGGTggg > 1:2026073/1‑150 (MQ=255) gCCCACGGTCAGGCGCGGGCCCACCGAGGCC‑TGCACGGCCTCGGCAGAGCTGGCGGCCGGGTTGGCCGCCAAGCGTTGGTGTAGCTCGCTGAACGAGGTGCAGCTGGCAAGCTCAGCCCGCTGCTCGTCGCTCAGTGGTAGGTGGGCCAg < 2:2026073/150‑1 (MQ=255) gCCCACGGTCAGGCGCGGGCCCACCGAGGCC‑TGCACGGCCTCGGCAGAGCTGGCGGCCGGGTTGGCCGCCAAGCGTTGGTGTAGCTCACTGAACGAGGTGCAGCTGGCAAGCTCAGCCCGCTGCTCGTCGCTCAGTGGTAGGTGGGCCAg < 2:1355360/150‑1 (MQ=255) gCCCACGGTCAGGCGCGGGCCCACCGAGGCC‑TGCACGGCCTCGGCAGAGCTGGCGGCCGGGTTGGCCGCCAAGCGTTGGTGTAGCTCACTGAACGAGGTGCAGCTGGCAAGCTCAGCCCGCTGCTCGTCGCTCAGTGGTAGGTGGGCCAg < 2:2030482/150‑1 (MQ=255) cccACGGTCAGGCGCGGGCCCACCGAGGCC‑TGCACGGCCTCGGCAGAGCTGGCGGCCGGGTTGGCCGCCAAGCGTTGGTGTAGCTCACTGAACGAGGTGCAGCTGGCAAGCTCAGCCCGCTGCTCGTCGCTCAGTGGTAGGTGGGCCAgg < 1:2239204/150‑1 (MQ=255) ccACGGTCAGGCGCGGGCCCACCGAGGCC‑TGCACGGCCTCGGCAGAGCTg < 2:824803/50‑1 (MQ=255) ccACGGTCAGGCGCGGGCCCACCGAGGCC‑TGCACGGCCTCGGCAGAGCTg > 1:824803/1‑50 (MQ=255) ccACGGTCAGGCGCGGGCCCACCGAGGCC‑TGCACGGCCTCGGCAGAGCTGGCGGCCGGGTTGGCCGCCAAGCGTTGGTGTAGCTCACTGAACGAGGTGCAGCTGGCAAGCTCAGCCCGCTGCTCGTCGCTCAGTGGTAGGTGGGCCAGGt > 2:425786/1‑150 (MQ=255) cACGGTCAGGCGCGGGCCCACCGAGGCC‑TGCACGGCCTCGGCAGAGCTGGCGGCCGGGTTGGCCGCCAAGCGTTGGTGTAGCTCACTGAACGAGGTGCAGCTGGCAAGCTCAGCCCGCTGCTCGTCGCTCAGTGGTAGGTGGGCCAGGTa < 2:841606/150‑1 (MQ=255) cACGGTCAGGCGCGGGCCCACCGAGGCC‑TGCACGGCCTCGGCAGAGCTGGCGGCCGGGTTGGCCGCCAAGCGTTGGTGTAGCTCACTGAACGAGGTGCAGCTGGCAAGCTCAGCCCGCTGCTCGTCGCTCAGTGGTAGGTGGGCCAGGTa < 2:841632/150‑1 (MQ=255) gcgcGGGCCCACCGAGGCC‑TGCACGGCCTCGGCAGAGCTGGCGGCCGGGTTGGCCGCCAAGCGTTGGTGTAGCTCACTGAACGAGGTGCAGCTGGCAAGCTCAGCCCGCTGCTCGTCGCTCAGTGGTAGGTTGGCCAGGTACTCGCCAAg > 1:563785/1‑150 (MQ=255) gcgcGGGCCCACCGAGGCC‑TGCACGGCCTCGGCAGAGCTGGCGGCCGGGTTGGCCGCCAAGCGTTGGTGTAGCTCACTGAACGAGGTGCAGCTGGCAAGCTCAGCCCGCTGCTCGTCGCTCAGTGGTAGGTGGGCCAGGTACTCGCCAAg > 2:454477/1‑150 (MQ=255) tctgccGAGGCCGTGCA‑GGCCTCGGTAGAGCTGGCGGCCGGGTTGGCCGCCAAGCGTTGGTGTAGCTCACTGAACGAGGTGCAGCTGGCAAGCTCAGCCCGCTGCTCGTCGCTCAGTGGTAGGTGGGCCAGGTACTCGCCAAGCGATTcc > 1:2103889/5‑150 (MQ=255) tctgccGAGGCCGTGCA‑GGCCTCGGGAGTATTGGCGGCCGGGTTGGCCGCCAAGCGTTGGTGTAGCTCACTGAACGAGGTGCAGCTGGCAAGCTCAGCCCGCTGCTCGTCGCTCAGTGGTAGGTGGGCCAGGTACTCGCCAAGCGATTcc > 1:1873386/5‑150 (MQ=255) tctgccGAGGCCGTGCA‑GGCCTCGGCAGAGCTGGCGGCCGGGTTGGCCGCCAAGCGTTGGTGTAGCTCACTGAACGAGGTGCAGCTGGCAAGCTCAGCCCGCTGCTCGTCGCTCAGTGGTAGGTGGGCCAGGTACTCGCCAAGCGATTcc > 2:134898/5‑150 (MQ=255) cccACCGAGGCC‑TGCACGGCCTCGGCAGAGCTGGCGGCCGGGTTGGCCGCCAAGCGTTGGTGTAGCTCACTGAACGAGGTGCAGCTGGCAAGCTCAGCCCGCTGCTCGTCGCTCAGTGGTAGGTGGGCCAGGTACTCGCCAAGCGATTcc > 1:1271892/1‑150 (MQ=255) ccACCGAGGCC‑TGCACGGCCTCGGCAGAGCTGGCGGCCGGGTTGGCCGCCAAGCGTTGGTGTAGCTCACTGAACGAGGTGCAGCTGGCAAGCTCAGCCCGCTGCTCGTCGCGCAGTGGGATGTGTGGGAGGTGCGCGCCAAGCGATTcag > 2:632926/1‑148 (MQ=255) cACCGAGGCC‑TGCACGGCCTCGGCAGAGCTGGCGGCCGGGTTGGCCGCCAAGCGTTGGTGTAGCTCACTGAACGAGGTGCAGCTGGCAAGCTCAGCCCGCTGCTCGTCGCTCAGTGGTAGGTGGGCCAGGTACTCGCCAAGCGATTCCgg < 1:425786/150‑1 (MQ=255) gCC‑TGCACGGCCTCGGCAGAGCTGGCGGCCGGGTTGGCCGCCAAGCGTTGGTGTAGCTCACTGAACGAGGTGCAGCAGATAGCCGCAGACCGCTTCTCGTCGCTTAGTGGTAGGTGGGCCATGTACTCGCCAAGCGATTCCGGCCTTgcg > 1:1853921/1‑150 (MQ=255) c‑TGCACGGCCTCGGCAGAGCTGGCGGCCGGGTTGGCCGCCAAGCGTTGGTGTAGCTCACTGAACGAGGTGCAGCTGGCAAGCTCAGCCCGCTGCTCGTCGCTCAGTGGTAGGTGGGCCAGGTACTCGCCAAGCGATTCCGGCCTTGCGCt > 2:628912/1‑150 (MQ=255) | TGCGCCATGGCTCGGGCACGACCTTGGTGCGTTTGATCGGCGGGGCGATCTTCAGGCACAGGCGGCCGCTGCCGTCGACGCCGAGCATTTCGGCTTCTTCCAGCTCGGCGGCGCTGCCCACGGTCAGGCGCGGGCCCACCGAGGCC‑TGCACGGCCTCGGCAGAGCTGGCGGCCGGGTTGGCCGCCAAGCGTTGGTGTAGCTCACTGAACGAGGTGCAGCTGGCAAGCTCAGCCCGCTGCTCGTCGCTCAGTGGTAGGTGGGCCAGGTACTCGCCAAGCGATTCCGGCCTTGCGCT > NC_002947/5726715‑5727009 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |