| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 684,849:1 | +A | 5.2% | coding (1401/2400 nt) | cadA‑II ← | cadmium translocating P‑type ATPase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 684,849 | 1 | . | A | 5.2% | 469.8 / 18.0 | 115 | coding (1401/2400 nt) | cadA‑II | cadmium translocating P‑type ATPase |
| Reads supporting (aligned to +/- strand): ref base . (52/57); new base A (2/4); total (54/61) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.83e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.22e-01 | |||||||||||
Only 100 of 117 total aligned reads displayed.
CGGCCAGGCGGTAAAGGTCGGCGCTGTTGCCGTCCAGCGCCTGGCTGTGAACCACCTGCGGGCTGCCGGAGGTGAGGGTGCCGGTTTTGTCGAACACTACGCGGTTGACCGCATGGGCACGCTCCAGGGCTTCGGCATCCTTGATC‑AGGATGCCGTGGCGGGCGGCGACCCCGGTACCGGCCATGATCGCGGCGGGCGTGGCCAGGCCGAGGGCGCAGGGGCAGGCGATGACCAGCACGGCGACGGCGTTGATCAGCGCGGTTTCCAGCGGTACCCCAGCCAGCCACCAGCCAA > NC_002947/684704‑684997 | cGGCCAGGCGGTAAAGGTCGGCGCTGTTGCCGTCCAGCGCCTGGCTGTGAACCACCTGCGGGCTGCCGGAGGTGAGGGTGCCGGTTTTGTCGAACACTACGCGGTTGACCGCATGGGCACGCTCCAGGGCTTCGGCATCCTTGATC‑AGGa < 1:1648508/150‑1 (MQ=255)cGGCCAGGCGGTAAAGGTCGGCGCTGTTGCCGTCCAGCGCCTGGCTGTGAAACAACTGCGGGCTGCCGGAGGTGAGGGTGCCGGTTTTGTCGAACACTACGCGGTTGACCGCATGGGCACGCTCCAGGGCTTCGGCATCCTTGATC‑AGGa > 2:1417674/1‑150 (MQ=255) gCCAGGCGGTAAAGGTCGGCGCTGTTGCCGTCCAGCGCCTGGCTGTGAACCACCTGCGGGCTGCCGGAGGTGAGGGTGCCGGTTTTGTCGAACACTACGCGGTTGACCGCATGGGCACGCTCCAGGGCTTCGGCATCC‑TGATCAAGGATg < 1:1379157/150‑1 (MQ=255) aGGCGGTAAAGGTCGGCGCTGTTGCCGTCCAGCGCCTGGCTGTGAACCACCTGCGGGCTGCCGGAGGTGAGGGTGCCGGTTTTGTCGAACACTACGCGGTTGACCGCATGGGCACGCTCCAGGGCTTCGGCATCCTTGATC‑AGGATGCCg < 2:1815939/150‑1 (MQ=255) aGGCGGTAAAGGTCGGCGCTGTTGCCGTCCAGCGCCTGGCTGTGAACCACCTGCGGGCTGCCGGAGGTGAGGGTGCCGGTTTTGTCGAACACTACGCGGTTGACCGCATGGGCACGCTCCAGGGCTTCGGCATCCTTGATC‑AGGATGCCg > 1:1993667/1‑150 (MQ=255) gCGGTAAAGGTCGGCGCTGTTGCCGTCCAGCGCCTGGCTGTGAACCACCTGCGGGCTGCCGGAGGTGAGGGTGCCGGTTTTGTCGAACACTACGCGGTTGACCGCATGGGCACGCTCCAGGGCTACGGCATCC‑TGATCAAGGATGCCgaa < 1:595057/150‑3 (MQ=255) cGGTAAAGGTCGGCGCTGTTGCCGTCCAGCGCCTGGCTGTGAACCACCTGCGGGCTGCCGGAGGTGAGGGTGCCGGTTTTGTCGAACACTACGCGGTTGACCGCATGGGCACGCTCCAGGGCTTCGGCATCCTTGATC‑AGGATGCCGTgg < 2:227003/150‑1 (MQ=255) ggCGCTGTTGCCGTCCAGCGCCTGGCTGTGAACCACCTGCGGGCTGCCGGAGGTGAGGGTGCCGGTTTTGTCGAACACTACGCGGTTGACCGCATGGGCACGCTCCAGGGCTTCGGCATCCTTGATC‑AGGATGCCGTGGCGGGCGGCGAc > 1:920087/1‑150 (MQ=255) cgcTGTTGCCGTCCAGCGCCTGGCTGTGAACCACCTGCGGGCTGCCGGAGGTGAGGGTGCCGGTTTTGTCGAACACTACGCGGTTGACCGCATGGGCACGCTCCAGGGCTTCGGCATCCTTGATC‑AGGATGCCGTGGCGGGCGGCGAccc < 1:732333/150‑1 (MQ=255) tGTTGCCGTCCAGCGCCTGGCTGTGAACCACCTGCGGGCTGCCGGAGGTGAGGGTGCCGGTTTTGTCGAACACTACGCGGTTGACCGCATGGGCACGCTCCAGGGCTTCGGCATCCTTGATC‑AGGATGCCGTggcgggcg > 2:1242623/1‑140 (MQ=255) tGTTGCCGTCCAGCGCCTGGCTGTGAACCACCTGCGGGCTGCCGGAGGTGAGGGTGCCGGTTTTGTCGAACACTACGCGGTTGACCGCATGGGCACGCTCCAGGGCTTCGGCATCCTTGATC‑AGGATGCCGTggcgggcg < 1:1242623/140‑1 (MQ=255) tGTTGCCGTCCAGCGCCTGGCTGTGAACCACCTGCGGGCTGCCGGAGGTGAGGGTGCCGGTTTTGTCGAACACTACGCGGTTGACCGCATGGGCACGCTCCAGGGCTTCGGCATCC‑TGATCAAGGATGCCga > 2:2254962/1‑131 (MQ=255) tGTTGCCGTCCAGCGCCTGGCTGTGAACCACCTGCGGGCTGCCGGAGGTGAGGGTGCCGGTTTTGTCGAACACTACGCGGTTGACCGCATGGGCACGCTCCAGGGCTTCGGCATCC‑TGATCAAGGATGCCga < 1:2254962/132‑2 (MQ=255) ttGCCGTCCAGCGCCTGGCTGTGAACCACCTGCGGGCTGCCGGAGGTGAGGGTGCCGGTTTTGTCGAACACTACGCGGTTGACCGCATGGGCACGCTCCAGGGCTTCGGCATCCTTGATC‑AGGATGCCGTGGCGGGCGGCGACCCCGGTa > 1:235672/1‑150 (MQ=255) cGTCCAGCGCCTGGCTGTGAACCACCTGCGGGCTGCCGGAGGTGAGGGTGCCGGTTTTGTCGAACACTACGCGGTTGACCGCATGGGCACGCTCCAGGGCTTCGGCATCCTTGATC‑AGGATGCCGTGGCGGGCGGCGACCCCGGTACCgg > 2:733268/1‑150 (MQ=255) gTCCAGCGCCTGGCTGTGAACCACCTGCGGGCTGCCGGAGGTGAGGGTGCCGGTTTTGTCGAACACTACGCGGTTGACCGCATGGGCACGCTCCAGGGCTTCGGCATCCTTGATC‑AGGATGCCGTGGCGGGCGGCGACCCCGGTACCGGc > 1:1413387/1‑150 (MQ=255) tCCAGCGCCTGGCTGTGACCCACCTGCGGGTTGCCGGACGTGATGTTGTCGGTTTTGTCGAACACTACGCGGTTGACCGCATGGGCACGCTCCAGGGCTTCGGCATCCTTGATC‑AGGATGCCGTGGCGGGCGGCGACCCCGGTACCGGcc < 2:1230844/150‑1 (MQ=255) ccAGCGCCTGGCTGTGAACCACCTGCGGGCTGCCGGAGGTGAGGGTGCCGGTTTTGTCGAACACTACGCGGTTGACCGCATGGGCACGCTCCAGGGCTTCGGCATCCTTGATC‑AGGATGCCGTGGCGGGCGGCGACCCCGGTACCGGCCa < 2:782185/150‑1 (MQ=255) ccAGCGCCTGGCTGTGAACCACCTGCGGGCTGCCGGAGGTGAGGGTGCCGGTTTTGTCGAACACTACGCGGTTGACCGCATGGGCACGCTCCAGGGCTTCGGCATCCTTGATC‑AGGATGCCGTGGCGGGCGGCGACCCCGGTACCGGCCa < 1:483023/150‑1 (MQ=255) cAGCGCCTGGCTGTGAACCACCTGCGGGCTGCCGGAGGTGATGGTGCCGGTGTTGTCGAACAATACGCGGTTGAGCGCATGGGCCCGCTCCAGGGCGTCGGCATCCTTGAAC‑AGGCTGCCGTGGCGGGCGGCGACCCCGGTACCGGCCAt > 1:1062286/1‑150 (MQ=255) cAGCGCCTGGCTGTGAACCACCTGCGGGCTGCCGGAGGTGAGGGTGCCGGTTTTGTCGAACACTACGCGGTTGCCCGCATGGGCACGCTCCAGGGCTTCGGCATCCTTGATC‑AGGATGCCGTGGCGGGCGGCGACCCCGGTACCGGCCAt > 1:164504/1‑150 (MQ=255) gcgcCTGGCTGTGAACCACCTGCGGGCTGCCGGAGGTGAGGGTGCCGGTTTTGTCGAACACTACGCGGTTGACCGCATGGGCACGCTCCAGGGCTTCGGCATCCTTGATC‑AGGATGCCGTGGCGGGCGGCGACCCCGGTACCGGCCATGa < 1:929855/150‑1 (MQ=255) gcgcCTGGCTGTGAACCACCTGCGGGCTGCCGGAGGTGAGGGTGCCGGTTTTGTCGAACACTACGCGGTTGACCGCATGGGCACGCTCCAGGGCTTCGGCATCCTTGATC‑AGGATGCCGTGGCGGGCGGCGACCCCGGTACCGGCCATGa < 2:1663757/150‑1 (MQ=255) gcgcCTGGCTGTGAACCACCTGCGGGCTGCCGGAGGTGAGGGTGCCGGTTTTGTCGAACACTACGCGGTTGACCGCATGGGCACGCTCCAGGGCTTCGGCATCCTTGATC‑AGGATGCCGTGGCGGGCGGCGACCCCGGTACCGGCAATGa < 2:1254580/150‑1 (MQ=255) cgcCTGGCTGTGAACCACCTGCGGGCTGCCGGAGGTGAGGGTGCCGGTTTTGTCGAACACTACGCGGTTGACCGCATGGGCACGCTCCAGGGCTTCGGCATCCTTGATC‑AGGATGCCGTGGCGGGCGGCGACCCCGGTACCGGCCATGAt > 2:1808765/1‑150 (MQ=255) gcCTGGCTGTGAACCACCTGCGGGCTGCCGGAGGTGAGGGTGCCGGTTTTGTCGAACACTACGCGGTTGACCGCATGGGCACGCTCCAGGGCTTCGGCATCCTTGATC‑AGGATGCCGTGGCGGGCGGCGACCCCGGTACCGGCCATGATc < 2:1319050/150‑1 (MQ=255) gCTGTGAACCACCTGCGGGCTGCCGGAGGTGAGGGTGCCGGTTTTGTCGAACACTACGCGGTTGACCGCATGGGCACGCTCCAGGGCTTCGGCATCCTTGATC‑AGGATGCCGTGGCGGGCGGCGACCCCGGTACCGGCCATGATCgcggc > 2:455262/1‑150 (MQ=255) gAACCACCTGCGGGCTGCCGGAGGTAAAGGTGCCAGTGTTTGCGAACACGAGTTGGTTGACCGCATGGGTGCTCTCCAGGCCTCCGCCATCCTTGATC‑AGGATGCCGTGGCGGGCGGCGACCCCGGTACCGGCCCTGCTCGCggcggacg > 1:1376131/1‑150 (MQ=255) aaCCACCTGCGGGCTGCCGGAGGTGAGGGTGCCGGTTTTGTCGAACACTACGCGGTTGACCGCATGGGCACGCTCCAGGGCTTCGGCATCCTTGATC‑AGGATGCCGTGGCGGGCGGCGACCCCGGTACCGGCCATGATCGCGGCGGGCGt > 2:1681357/1‑150 (MQ=255) aaCCACCTGCGGGCTGCCGGAGGTGAGGGTGCCGGTTTTGTCGAACACTACGCGGTTGACCGCATGGGCACGCTCCAGGGCGTCGGCATCCTTGATC‑AGGATGCGGTGGCGGGCGGCGACCCCGGTACCGGCCATTATCGCGGCGGGCGt < 2:1062286/150‑1 (MQ=255) ccaccTGCGGGCTGCCGGAGGTGAGGGTGCCGGTTTTGTCGAACACTACGCGGTTGACCGCATGGGCACGCTCCAGGGCTTCGGCATCCTTGATC‑AGGATGCCGTGGCGGGCGGCGACCCCGGTACCGGCCATGATcgcg > 2:1283418/1‑140 (MQ=255) ccaccTGCGGGCTGCCGGAGGTGAGGGTGCCGGTTTTGTCGAACACTACGCGGTTGACCGCATGGGCACGCTCCAGGGCTTCGGCATCCTTGATC‑AGGATGCCGTGGCGGGCGGCGACCCCGGTACCGGCCATGATcgcg < 1:1283418/140‑1 (MQ=255) ccaccTGCGGGCTGCCGGAGGTGAGGGTGCCGGTTTTGTCGAACACTACGCGGTTGACCGCATGGGCACGCTCCAGGGCTTCGGCATCCTTGATC‑AGGATGCCGTGGCGGGCGGCGACCCCGGTACCGGCCATGATCGCGGCGGGCGTgg < 2:1747056/150‑1 (MQ=255) ccaccTGCGGGCTGCCGGAGGTGAGGGTGCCGGTTTTGTCGAACACTACGCGGTTGACCGCATGGGCACGCTCCAGGGCTTCGGCATCC‑TGATCAAGGATGCCgaa > 2:1090332/1‑104 (MQ=255) ccaccTGCGGGCTGCCGGAGGTGAGGGTGCCGGTTTTGTCGAACACTACGCGGTTGACCGCATGGGCACGCTCCAGGGCTTCGGCATCC‑TGATCAAGGATGCCgaa < 1:1090332/106‑3 (MQ=255) caccTGCGGGCTGCCGGAGGTGAGGGTGCCGGTTTTGTCGAACACTACGCGGTTGACCGCATGGGCACGCTCCAGGGCTTCGGCATCCTTGATC‑AGGATGCCGTGGCGGGGGGCGACCCCGGTACCGGCCATGATCGCGGGGGGCGTGGc > 1:1416564/1‑150 (MQ=255) ccTGCGGGCTGCCGGAGGTGAGGGTGCCGGTTTTGTCGAACACTACGCGGTTGACCGCATGGGCACGCTCCAGGGCTTCGGCATCCTTGATC‑AGGATGCCGTGGCGGGCGGCGACCCCGGTACCGGCCATGATCGCGGCGGGCGTGGCCa < 1:1808765/150‑1 (MQ=255) cTGCGGGCTGCCGGAGGTGAGGGTGCCGGTTTTGTCGAACACTACGCGGTTGACCGCATGGGCACGCTCCAGGGCTTCGGCATCCTTGATC‑AGGATGCCGTGGCGGGCGGCGACCCCGGTACCGGCCATGATCGCGGCGGGCGTGGCCAg > 2:1710692/1‑150 (MQ=255) cTGCCGGAGGTGAGGGTGCCGGTTTTGTCGAACACTACGCGGTTGACCGCATGGGCACGCTCCAGGGCTTCGGCATCCTTGATC‑AGGATGCCGTGGCGGGCGGCGACCCCGGTACCGGCCATGATCGCGGCGGGCGTGGCCAGGCCGAgg < 1:1710692/150‑1 (MQ=255) ccGGAGGTGAGGGTGCCGGTTTTGTCGAACACTACGCGGTTGACCGCATGGGCACGCTCCAGGGCTTCGGCATCCTTGATC‑AGGATGCCGTGGCGGGCGGCGACCCCGGTACCGGcc > 1:1155339/1‑117 (MQ=255) cGGAGGTGAGGGTGCCGGTTTTGTCGAACACTACGCGGTTGACCGCATGGGCACGCTCCAGGGCTTCGGCATCCTTGATC‑AGGATGCCGTGGCGGGCGGCGACCCCGGTACCGGCCATGATCGCGGCGGGCGTGGCCAGGCCGAGGgcgc > 1:1219288/1‑150 (MQ=255) cGGAGGTGAGGGTGCCGGTTTTGTCGAACACTACGCGGTTGACCGCATGGGCACGCTCCAGGGCTTCGGCATCCTTGATC‑AGGATGCCGTGGCGGGCGGCGACCCCGGTACCGGCCATGATCGCGGCGGGCGTGGCCAGGCCGAGGgcgc > 2:1155696/1‑150 (MQ=255) cGGAGGTGAGGGTGCCGGTTTTGTCGAACACTACGCGGTTGACCGCATGGGCACGCTCCAGGGCTTCGGCATCCTTGATC‑AGGATGCCGTGGCGGGCGGCGACCCCGGTACCGGCCATGATCGCAGCGGGGGTGGCGACGCCGCgggacc > 2:2317054/1‑147 (MQ=255) ggAGGTGAGGGTGCCGGTTTTGTCGAACACTACGCGATCAGCCGCATGGGCACGCTCCAGGGCTTCGGCATCCTTGATC‑AGGATGCCGTGGCGGGCGGCGACCCCGGTACCGGCCATGATCGCGGCGGGCGTGGCCAGGCCGAGGGCGCa < 1:738803/150‑1 (MQ=255) gAGGTGAGGGTGCCGGTTTTGTCGAACACTACGCGGTTGACCGCATGGGCACGCTCCAGGGCTTCGGCATCCTTGATC‑AGGATGCCGTGGCGGGCGGCGACCCCGGTACCGGCCATGATCGCGGCGGGCGTGGCCAGGCCGAGGGCGCAg < 2:1993667/150‑1 (MQ=255) gTGAGGGTGCCGGTTTTGTCGAACACTACGCGGTTGACCGCATGGGCACGCTCCAGGGCTTCGGCATCCTTGATC‑AGGATGCCGTGGCGGGCGGCGACCCCGGTACCGGCCATGATCGCGGCGGGCGTGGCCAGGCCGAGGGCGCAgggg > 2:1324993/1‑150 (MQ=255) gTGAGGGTGCCGGTTTTGTCGAACACTACGCGGTTGACCGCATGGGCACGCTCCAGGGCTTCGGCATCCTTGATC‑AGGATGCCGTGGCGGGCGGCGACCCCGGTACCGGCCATGATCGCGGCGGGCGTGGCCAGGCCGAGGGCGCAgggg > 2:2042829/1‑150 (MQ=255) tGAGGGTGCCGGTTTTGTCGAACACTACGCGGTTGACCGCATGGGCACGCTCCAGGGCTTCGGCATCCTTGATC‑AGGATGCCGTggcgggc < 2:1869061/91‑1 (MQ=255) tGAGGGTGCCGGTTTTGTCGAACACTACGCGGTTGACCGCATGGGCACGCTCCAGGGCTTCGGCATCCTTGATC‑AGGATGCCGTggcgggc > 1:1869061/1‑91 (MQ=255) aGGGTGCCGGTTTTGTCGAACACTACGCGGTTGACCGCATGGGCACGCTCCAGGGCTTCGGCATCCTTGATC‑AGGATGCCGTGGCGGGCGGCGACCCCGGTACCGGCCATGATCGCGGCGGGCGTGGCCAGGCCGAGGGCGCAGGGGCAg < 2:1576214/150‑1 (MQ=255) gCCGGTTTTGTCGAACACTACGCGGTTGACAGCATGGGCACGCTCCAGGGCTTCGGCATCCTTGATC‑AGGATGCCGTGGCGGGCGGCGACCCCGGTACCGGCCATGATCGCGGCGGGCGTGGCCAGGCCGGGGGCGCAGGGGCAGGCgct > 1:1090113/1‑148 (MQ=255) cGGTTTTGTCGAACACTACGCGGTTGACCGCATGGGCACGCTCCAGGGCTTCGGCATCCTTGATC‑AGGATGCCGTGGCGGGCGGCGACCCCGGTACCGGCCCTGATCGCGGCGGGCGTGGCCAGGCCGAGGGCGCCGGGGCCGGCGCTGa > 2:549847/1‑150 (MQ=255) cGGTTTTGTCGAACACTACGCGGTTGACCGCATGGGCACGCTCCAGGGCTTCGGCATCCTTGATC‑AGGATGCCGTGGCGGGCGGCGACCCCGGTACCGGCCAt > 2:1481649/1‑103 (MQ=255) cGGTTTTGTCGAACACTACGCGGTTGACCGCATGGGCACGCTCCAGGGCTTCGGCATCCTTGATC‑AGGATGCCGTGGCGGGCGGCGACCCCGGTACCGGCCAt < 1:1481649/103‑1 (MQ=255) cGGTTTTGTCGAACACTACGCGGTTGACCGCATGGGCACGCTCCAGGGCTTCGGCATCCTTGATC‑AGGATGCCGTGGCGGGCGGCGACCCCGGTACCGGCCATGATCGCGGCGGGCGTGGCCAGGCCGAGGGCGCAggg < 2:199881/139‑1 (MQ=255) cGGTTTTGTCGAACACTACGCGGTTGACCGCATGGGCACGCTCCAGGGCTTCGGCATCCTTGATC‑AGGATGCCGTGGCGGGCGGCGACCCCGGTACCGGCCATGATCGCGGCGGGCGTGGCCAGGCCGAGGGCGCAggg > 1:199881/1‑139 (MQ=255) cGGTTTTGTCGAACACTACGCGGTTGACCGCATGGGCACGCTCCAGGGCTTCGGCATCCTTGATC‑AGGATGCCGTGGCGGGCGGCGACCCCGGTACCGGCCATGATCGCGGCGGGCGTGGCCAGGCCGAGGGCGCAGGGGCAGGCGATGa < 1:1037164/150‑1 (MQ=255) cGGTTTTGTCGAACACTACGCGGTTGACCGCATGGGCACGCTCCAGGGCTTCGGCATCCTTGATC‑AGGATGCCGTGGCGGGCGGCGACCCCGGTACCGGCCATGATCGCGGCGGGCGTGGCCAGGCCGAGGGCGCAGGGGCAGGCGATGa < 2:1376131/150‑1 (MQ=255) ttttGTCGAACACTACGCGGTTGACCGCATGGGCACGCTCCAGGGCTTCGGCATCCTTGATC‑AGGATGCCGTGGCGGGCGGCGACCCCGGTACCGGCCATGATCGCGGCGGGCGTGGCCAGGCCGAGGGCGCAGGGGCAGGCGATGACCa < 1:1324993/150‑1 (MQ=255) gTCGAACACTACGCGGTTGACCGCATGGGCACGCTCCAGGGCTTCGGCATCCTTGATc > 2:1307779/1‑58 (MQ=255) gTCGAACACTACGCGGTTGACCGCATGGGCACGCTCCAGGGCTTCGGCATCCTTGATc < 1:1307779/58‑1 (MQ=255) tCGAACACTACGCGGTTGACCGCATGGGCACGCTCCAGGGCTTCGGCATCCTTGATC‑AGGATGCCGTGGCGGGCGGCGACCCCGGTACCGGCCATGATCGCGGCGGGCGTGGCCAGGCCGAGGGCGCAGGGGCAGGCGATGACCAGCacg > 2:2086730/1‑150 (MQ=255) tCGAACACTACGCGGTTGACCGCATGGGCACGCTCCAGGGCTTCGGCATCCTTGATC‑AGGATGCCGTGGCGGGCGGCGACCCCGGTACCGGCCATGATCGCGGCGGGCGTGGCCAGGCCGAGGGCGCAGGGGCAGGCGATGACCAGCacg < 1:1619226/150‑1 (MQ=255) cGAACACTACGCGGTTGACCGCATGGGCACGCTCCAGGGCTTCGGCATCCTTGATC‑AGGATGCTGTGGCGGGCGGCGACCCCGGTACCGGCAACGATCGCGGCGGGCGTGGCCAGGCCGAGGGCGCAGGGGCAGGCGATGACCAGCacgg < 1:549847/150‑1 (MQ=255) cGAACACTACGCGGTTGACCGCATGGGCACGCTCCAGGGCTTCGGCATCCTTGATC‑AGGATGCCGTGGCGGGCGGCGACCCCGGTACCGGCCATGATCGCGGCGGGCGTGGCCAGGCCGAGGGCGCAGGGGCAg < 1:1675575/134‑1 (MQ=255) cGAACACTACGCGGTTGACCGCATGGGCACGCTCCAGGGCTTCGGCATCCTTGATC‑AGGATGCCGTGGCGGGCGGCGACCCCGGTACCGGCCATGATCGCGGCGGGCGTGGCCAGGCCGAGGGCGCAGGGGCAg > 2:1675575/1‑134 (MQ=255) gAACACTACGCGGTTGACCGCATGGGCACGCTCCAGGGCTTCGGCATCCTTGATC‑AGGATGCCGTGGCGGGCGGCGACCCCGGTACCGGCCATGATCGCGGCGGGCGTGGCCAGGCCGAGGGCGCAGGGGCAGGCGATGACCAGCacggc > 1:842376/1‑150 (MQ=255) gAACACTACGCGGTTGACCGCATGGGCACGCTCCAGGGCTTCGGCATCCTTGATC‑AGGATGCCGTGGCGGGCGGCGACCCCGGTACCGGCCATGATCGCGGCGGGCGTGGCCAGGCCGAGGGCGCAGGGGCAGGCGATGACCAGCacggc > 1:226393/1‑150 (MQ=255) gAACACTACGCGGTTGACCGCATGGGCACGCTCCAGGGCTTCGGCATCCTTGATC‑AGGATGCCGTGGCGGGCGGCGACCCCGGTACCGGCCATGATCGCGGCGGGCGTGGCCAGGCCGAGGGCGCAGGGGCAGGCGATGACCAGCacggc < 1:2042829/150‑1 (MQ=255) gAACACTACGCGGTTGACCGCATGGGCACGCTCCAGGGCTTAGGCATCCTTGATC‑AGGATGCCGTGGCGGGCGGCGACCCCGGTACCGGCCATGATCGCGGCGGGCGTGGCCAGGCCGAGGGCGCAGGGGCAGGCGATGACCAGCacggc < 1:519264/150‑1 (MQ=255) acacTACGCGGTTGACCGCATGGGCACGCTCCAGGGCTTCGGCATCCTTGATC‑AGGATGCCGTGGCGGGCGGCGACCCCGGTACCGGCCATGATCGCGGCGGGCGTGGCCAGGCCGAGGGCGCAGGGGCAGGCGATGACCCGCacggcga > 1:716002/1‑150 (MQ=255) tACGCGGTTGACCGCATGGGCACGCTCCAGGGCTTCGGCATCCTTGATC‑AGGATGCCGTGGCGGGCGGCGACCCCGGTACCGGCCATGATCGCGGCGGGCGTGGCCAGGCCGa < 2:1107222/113‑1 (MQ=255) tACGCGGTTGACCGCATGGGCACGCTCCAGGGCTTCGGCATCCTTGATC‑AGGATGCCGTGGCGGGCGGCGACCCCGGTACCGGCCATGATCGCGGCGGGCGTGGCCAGGCCGa > 1:1107222/1‑113 (MQ=255) tACGCGGTTGACCGCATGGGCACGCTCCAGGGCTTCGGCATCCTTGATC‑AGGATGCCGTGGCGGGCGGCGACCCCGGTACCGGCCATGATCGCGGCGGGCGTGGCCAGGCCGAGGGCGCAGGGGCAGGCGATGACCAGCacggcgacggc > 1:1856951/1‑150 (MQ=255) ggTTGACCGCATGGGCACGCTCCAGGGCTTCGGCATCCTTGATC‑AGGATGCCGTGGCGGGCGGCGACCTCGGTACCGGCCATGATCGCGGCGGGCGTGGCCAGGCCGAGGGCGCAGGGGCAGGCGATGACCAGCACGGCGACGGCGTTGa < 1:654218/150‑1 (MQ=255) ttGACCGCATGGGCACGCTCCAGGGCTTCGGCATCCTTGATC‑AGGATGCCGTGGCGGGCGGCGACCCCGGTACCGGCCATGATCGCGGCGGGCGTGGCCAGGCCGAGGGCGCAGGGGCAGGCGATGACCAGCACGGCGACGGCGTTGATc < 2:235672/150‑1 (MQ=255) aCCGCATGGGCACGCTCCAGGGCTTCGGCATCCTTGATC‑AGGATGCCGTGGCGGGCGGCGACCCCGGTACCGGCCATGATCGCGGCGGGCGTGGCCAGGCCGAGGGCGCAGGGGCAGGCGATGACCAGCACGGCGACGGCGTTGATCAgc < 1:2086730/150‑1 (MQ=255) aCCGCATGGGCACGCTCCAGGGCTTCGGCATCCTTGATC‑AGGATGCCGTGGCGGGCGGCGACCCCGGTACCGGCCATGATCGCGGCGGGCGTGGCCAGGCCGAGGGCGCAGGGGCAGGCGATGACCAGCACGGCGACGGCGTTGATCAgc > 1:1445235/1‑150 (MQ=255) gCATGGGCACGCTCCAGGGCTTCGGCATCCTTGATC‑AGGATGCCGTGGCGGGCGGCGACCCCGGTACCGGCCATGATCGCGGCGGGCGTGGCCAGGCCGAGGGCGCAGGGGCAGGCGATGACCAGCACGGCGACGGCGTTGATCAGcgcg > 1:1394137/1‑150 (MQ=255) gCATGGGCACGCTCCAGGGCTTCGGCATCCTTGATC‑AGGATGCCGTGGCGGGCGGCGACCCCGGTACCGGCCATGATCCCGGCGGGCGTGGCCCGGCCGGGGGCGCAGGCGCGAGCGCTGATCATCACCGCGACGGCGTTAGTCAGcgcg > 2:1396580/1‑150 (MQ=255) ataggCACGCTCCTTGGCTTCGGCATCCTTGATC‑AGGATGCCGTGGCGGGCGGCGACCCCGGTACCGGCCATGATCGCGGCGGGCGTGGCCAGGCCGAGGGCGCAGGGGCAGGCGATGACCAGCACGGCGACGGCGTTGATCAGCGCGGt < 2:139142/147‑1 (MQ=255) aCGCTCCAGGGCTTCGGCATCCTTGATC‑AGGATGCCGTGGCGGGCGGCGACCCCGGTACCGGCCATGATCGCGGCGGGCGTGGCCAGGCCGAGGGCGCAGGGGCAGGCGa > 1:1190802/1‑110 (MQ=255) aCGCTCCAGGGCTTCGGCATCCTTGATC‑AGGATGCCGTGGCGGGCGGCGACCCCGGGACCGGCCATGATCGCGGCGGGCGTGGCCAGGCCGAGGGCGCAGGGGCAGGCGa < 2:1190802/110‑1 (MQ=255) cGCTCCAGGGCTTCGGCATCCTTAACA‑AGAATGCCGTGGCGGGCGGCGACCCCGGTACCGGCCATGATCGCGGCGGGCGTGGCCAGGCCGAGGGCGCAGGGGCAGGCGATGACCAGCACGGCGACGGCGTTGATCAGCGCGGTTTCCAGc < 1:377/150‑1 (MQ=255) gCTCCAGGGCTTCGGCATCCTTGATC‑AGGATGCCGTGGCGGGCGGCGACCCCGGTACCGGCCATGATCGCGGCGGGCGTGGCCAGGCCGAGGGCGCAGGGGCAGGCGATGACCAGCACGGCGACGGCGTTGATCAGCGCGGTTTCCAGCg > 1:2247998/1‑150 (MQ=255) tCCAGGGCTTCGGCATCCTTGATC‑AGGATGCCGTGGCGGGCGGCGACCCCGGTACCGGCCATGATCGCGGCGGGCGTGGCCAGGCCGAGGGCGCAGGGGCAGGCGATGACCAGCacggcgacg > 1:1283529/1‑123 (MQ=255) gCTTCGGCATCCTTGATC‑AGGATGCCGTGGCGGGCGGCGACCCCGGTACCGGCCATGATCGCGGCGGGCGTGGCCAGGCCGAGGGCGCAGGGGCAGGCGATGACCAGCACGGCGACGGCGTTGATCAGCGCGGTTTCCAGCGGTACCcca < 2:1856951/150‑1 (MQ=255) ttCGGCATCCTTGATC‑AGGATGCCGTGGCGGGCGGCGACCCCGGTACCGGCCATGATCGCGGCGGGCGTGGCCAGGCCGAGGGCGCAGGGGCAGGCGATGACCAGCACGGCGACGGCGTTGATCAGCGCGGTTTCCAGCGGTACCccagc > 1:1952239/1‑150 (MQ=255) ttCGGCATCCTTGATC‑AGGATGCCGTGGCGGGCGGCGACCCCGGTACCGGCCATGATCGCGGCGGGCGTGGCCAGGCCGAGGGCGCAGGGGCAGGCGATGACCAGCACGGATATGTCGTTGATCAGCGCGGTTTCCAGCGGTACCccagc > 1:738241/1‑150 (MQ=255) ttCGGCATCCTTGAGC‑AGGAGGCCGTGGCGGGCGGCGGCCCCGGTACCGGCCATGATCGCGGCGGGCGTGGCCAGGCCGAGGGCGCAGGGGCAGGCGATGACCAGCACGGCGACGGCGTTGATCAGCGCGGTTTCCAGCGGTACCccagc > 2:2293283/1‑150 (MQ=255) cGGCATCCTTGATC‑AGGATGCCGTGGCGGGCGGCGACCCCGGTACCGGCCATGATCGCGGCGGGCGTGGCCAGGCCGAGGGCGCAGGGGCAGGCGATGACCAGCACGGCGACGGCGTTGATCAGCGCGGTTTCCAGCGGTACCccagcca < 2:2247998/150‑1 (MQ=255) cGGCATCCTTGATC‑AGGATGCCGTGGCGGGCGGCGACCCCGGTACCGGCCATGATCGCGGCGGGCGTGGCCAGGCCGAGGGCGCAGGGGCAGGCGATGACCAGCACGGCGACGGCGTTGATCAGCGCGGTTTCCAGCGGTACCccagcca < 1:948840/150‑1 (MQ=255) cGGCATCCTTGATC‑AGGATGCCGTGGCGGGCGGCGACCCCGGTACCGGCCATGATCGCGGCGGGCGTGGCCAGGCCGAGGGCGCAGGGGCAGGCGATGACCAGCACGGCGACGGCGTTGATCAGCGCGGTTTCCAGCGGTACCccagcca < 2:842376/150‑1 (MQ=255) cATCCTTGATC‑AGGATGCCGTGGCGGGCGGCGACCCCGGTACCGGCCATGATCGCGGCGGGCGTGGCCAGGCCGAGGGCGCAGGGGCAGGCGAt < 1:2163704/94‑1 (MQ=255) cccTTGATC‑AGGATGCCGTGGCGGGCGGCGACCCCGGTACCGGCCATGATCGCGGCGGGCGTGGCCAGGCCGAGGGCGCAGGGGCAGGCGATGACCAGCACGGCGACGGCGTTGATCAGCGCGGTTTCCAGCGGTACCCCAGccagccac < 1:1494213/149‑1 (MQ=255) cTTGATC‑AGGATGCCGTGGCGGGCGGCGACCCCGGTACCGGCCATGATCGCGGCGGGCGTGGCCAGGCCGAGGGCGCAGGGGCAGGCGATGACCAGCACGGCGACGGCGTTGATCAgc < 2:1430054/118‑1 (MQ=255) cTTGATC‑AGGATGCCGTGGCGGGCGGCGACCCCGGTACCGGCCATGATCGCGGCGGGCGTGGCCAGGCCGAGGGCGCAGGGGCAGGCGATGACCAGCACGGCGACGGCGTTGATCAGCGCGGTTTACCGCGGTACCACAGccagacacca > 1:1698908/1‑150 (MQ=255) ttGATC‑AGGATGCCGTGGCGGGCGGCGACCCCGGTACCGGCCATGATCGCGGCGGGCGTGGCCAGGCCGAGGGCGCAGGGGCAGGCGATGACCAGCACGGCGACGGCGTTGATCAGCGCGGTTTCCAGCGGTACCCCAGccagccaccag > 1:584916/1‑150 (MQ=255) tGATC‑AGGATGCCGTGGCGGGCGGCGACCCCGGTACCGGCCATGATCGCGGCGGGCGTGGCCAGGCCGAGGGCGCAGGGGCAGGCGATGACCAGCACGGCGACGGCGTTGATCAGCGCGGTTTCCAGCGGTACCCCAGccagccaccagc < 1:2073561/150‑1 (MQ=255) tC‑AGGATGCCGTGGCGGGCGGCGACCCCGGTACCGGCCATGATCGCGGCGGGCGTGGACAGGCCGGGGGCGCAGGGGCAGGCGATGACCAGCACGGCGACGGCGTTGATCAGCGCGGTTTCCAGCGGTACCCCAGCCAGCCACCAGCCaa > 2:1532922/1‑150 (MQ=255) | CGGCCAGGCGGTAAAGGTCGGCGCTGTTGCCGTCCAGCGCCTGGCTGTGAACCACCTGCGGGCTGCCGGAGGTGAGGGTGCCGGTTTTGTCGAACACTACGCGGTTGACCGCATGGGCACGCTCCAGGGCTTCGGCATCCTTGATC‑AGGATGCCGTGGCGGGCGGCGACCCCGGTACCGGCCATGATCGCGGCGGGCGTGGCCAGGCCGAGGGCGCAGGGGCAGGCGATGACCAGCACGGCGACGGCGTTGATCAGCGCGGTTTCCAGCGGTACCCCAGCCAGCCACCAGCCAA > NC_002947/684704‑684997 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |