| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,027,092:1 | +T | 5.6% | intergenic (‑122/+25) | dppA‑II ← / ← dppA‑III | dipeptide ABC transporter substrate‑binding protein/dipeptide ABC transporter substrate‑binding protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,027,092 | 1 | . | T | 5.6% | 287.5 / 10.3 | 72 | intergenic (‑122/+25) | dppA‑II/dppA‑III | dipeptide ABC transporter substrate‑binding protein/dipeptide ABC transporter substrate‑binding protein |
| Reads supporting (aligned to +/- strand): ref base . (40/28); new base T (2/2); total (42/30) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.24e-01 | |||||||||||
GCGGAAAGGCAGGTAACGTGGCGCATGGCAAATCCTTTTTCATCTGTTCGCGCCGCCTCCGGGTACGACTGACGGCAACAGTTCGCCGACCCCGTAGCGTATGGCCGCAGGACGACATGAAGGGGTAGCGGGGGTGAAGGGCACCCGC‑GATTCAGCGGGTGCCT‑CAGTCAGCCTATTTGTCCACGCTGACGCCGTAGAAGGAATTCAGCGCGAACGGGCTGATCTTGAAGTCCTTCACCTTGGCGCTCATGGGCTGGTAGACAGTGGAGTGGGCGATCGGGGTGATCGGTACCTGC > NC_002947/1026945‑1027240 | gcgGAAAGGCAGGTAACGTGGCGCATGGCAAATCCTTTTTCATCTGTTCGCGCCGCCTCCGGGTACGACTGACGGCAACAGTTCGCCGACCCCGTAGCGTATGGCCGCAGGACGACATGAAGGGGTAGCGGGGGTGAAGGGCACCCGC‑Ga < 1:1674322/150‑1 (MQ=255)gcgGAAAGGCAGGTAACGTGGCGCATGGCAAATCCTTTTTCATCTGTTCGCGCCGCCTCCGGGTACGACTGACGGCAACAGTTCGCCGACCCCGTAGCGTATGGCCGCAGGACGACATGAAGGGGTAGCGGGGGTGAAGGGCACCCGC‑Ga < 1:1525021/150‑1 (MQ=255) ggAAAGGCAGGTAACGTGGCGCATGGCAAATCCTTTTTCATCTGTTCGCGCCGCCTCCGGGTACGACTGACGGCAACAGTTCGCCGACCCCGTAGCGTATGGCCGCAGGACGACATGAAGGGGTAGCGGGGGTGAAGGGCACCCGC‑GAtt > 1:946997/1‑150 (MQ=255) cAGGTAACGTGGCGCATGGCAAATCCTTTTTCATCTGCTGACTCCGCCTCCGGGTACGACTGACGGCAACAGTTCGCCGACCCCGTAGCGTATGGCCGCAGGACGACATGAAGGGGTAGCGGGGGTGAAGGGCACCCGC‑GATTCAGCggg < 1:23059/150‑1 (MQ=255) aGGTAACGTGGCGCATGGCAAATCCTTTTTCATCTGTTCGCGCCGCCTCCGGGTACGACTGACGGCAACAGTTCGCCGACCCCGTAGCGTATGGCCGCAGGACGACATGAAGGGGTAGCGGGGGTGAAGGGCACCCGC‑GATTCAGCGGGt < 1:619451/150‑1 (MQ=255) aGGTAACGTGGCGCATGGCAAATCCTTTTTCATCTGTTCGCGCCGCCTCCGGGTACGACTGACGGCAACAGTTCGCCGACCCCGTAGCGTATGGCCGCAGGACGACATGAAGGGGTAGCGGGGGTGAAGGGCACCCGC‑GATTCAGCGGGt < 2:1444923/150‑1 (MQ=255) aaCGTGGCGCATGGCAAATCCTTTTTCATCTGTTCGCGCCGCCTCCGGGTACGACTGACGGCAACAGTTCGCCGACCCCGTAGCGTATGGCCGCAGGACGACATGAAGGGGTAGCGGGGGTGAAGGGCACCCGC‑GATTCAGCGGGTGCCt > 1:2292553/1‑150 (MQ=255) cGTGGCGCATGGCAAATCCTTTTTCATCTGTTCGCGCCGCCTCCGGGTACGACTGACGGCAACAGTTCGCCGACCCCGTAGCGTATGGGCGCAGCACGACCTGCCAGTGCTGCGGGGGTGAAGGGCACCCGC‑GATTCAGCGGGTGCCt‑ca < 2:1892148/150‑1 (MQ=255) ggCGCATGGCAAATCCTTTTTCATCTGTTCGCGCCGCCTCCGGGTACGACTGACGGCAACAGTTCGCCGACCCCGTAGCGTATGGCCGCAGGACGACATGAAGGGGTACCGGGGGTGAAGGGGACCCGC‑GATTCAGCGGGTGCCt‑cagtc < 2:372250/150‑1 (MQ=255) gcATGGCAAATCCTTTTTCATCTGTTCGCGCCGCCTCCGGGTACGACTGACGGCAACAGTTCGCCGACCCCGTAGCGTATGGCCGCAGGACGACATGAAGGGGTAGCGGGGGTGAAGGGCACCCGC‑GATTCAGCGGGTGCCT‑CAGTCAGc > 2:1417453/1‑150 (MQ=255) ggCAAATCCTTTTTCATCTGTTCGCGCCGCCTCCGGGTACGACTGACGGCAACAGTTCGCCGACCCCGTAGCGTATGGCCGCAGGACGACATGAAGGGGTAGCGGGGGTGAAGGGCACCCGC‑GATTCAGCGGGTGCCT‑CAGTCAGCCTAt > 2:867090/1‑150 (MQ=255) cAAATCCTTTTTCATCTCTTCCCGCCGCCTCCGGTTACGACTGACGTCAACTGTTCGCCGACCCCGTAGCGTATGGCCGCAGCACGACATGAAGGGGTAGCGGGGGTGAAGGGCACCCGC‑GATTCAGCGGGTGCCT‑CAGTCAGCCTAttt < 1:1123888/150‑1 (MQ=255) aTCCTTTTTCATCTGTTCGCGCCGTCTCCGGGTACGACTGACGGCAACAGTTCGCCGACCCCGTAGCGTATGGCCGCAGGACGACATGAAGGGGTAGCGGGGGTGAAGGGCACCCGCTGAATC‑GCGGGTGcc < 1:1939852/132‑1 (MQ=255) aTCCTTTTTCATCTGTTCGCGCCGCCTCCGGGTACGACTGACGGCAACAGTTCGCCGACCCCGTAGCGTATGGCCGCAGGACGACATGAAGGGGTAGCGGGGGTGAAGGGCACCCGCTGAATC‑GCGGGTGcc > 2:1939852/1‑132 (MQ=255) tttttCATCTGTTCGCGCCGCCTCCGGGTACGACTGACGGCAACAGTTCGCCGACCCCGTAGCGTATGGCCGCAGGACGACATGAAGGGGTAGCGGGGGTGAAGGGCACCCGC‑GATTCAGCGGGTGCCT‑CAGTCAGCCTATTTGTCCACg > 1:245178/1‑150 (MQ=255) tCATCTGTTCGCGCCGCCTCCGGGTACGACTGACGGCAACAGTTCGCCGACCCCGTAGCGTATGGCCGCAGGACGACATGAAGGGGTAGCGGGGGTGAAGGGCACCCGC‑GATTCAGCGGGTGCCT‑CAGTCAGCCTATTTGTCCACGCTGa > 1:341997/1‑150 (MQ=255) cTGTTCGCGCCGCCTCCGGGTACGACTGACGGCAACAGTTCGCCGACCCCGTAGCGTATGGCCGCAGGACGACATGAAGGGGTAGCGGGGGTGAAGGGCACCCGC‑GATTCAGCGGGTGCCT‑CAGTCAGCCTATTTGTCCACGCTGACGcc > 1:1348157/1‑150 (MQ=255) gcgcCGCCACCGGGTACGACTGACGGCAACAGTTCGCCGACCCCGTAGCGTATGGCCGCAGGACGACATGAAGGGGTAGCGGGGGTGAAGGGCACCCGC‑GATTCAGCGGGTGCCT‑CAGTCAGCCTATTTGTCCACGCTGACGGCGTAGaa < 2:225536/150‑1 (MQ=255) cgccgcCTCCGGGTACGACTGACGGCAACAGTTCGCCGACCCCGTAGCGTATGGCCGCAGGACGACATGAAGGGGTAGCGGGGGTGAAGGGCACCCGC‑GATTCAGCGGGTGCCT‑CAGTCAGCCTATTTGTCCACGCTGACGCCGTAGAAg < 2:2395388/150‑1 (MQ=255) cTGACGGCAACAGTTCGCCGACCCCGTAGCGTATGGCCGCAGGACGACATGAAGGGGTAGCGGGGGTGAAGGGCACCCGC‑GATTCAGCGGGTGCCT‑CAGTCAGCCTATTTGTCCACGCTGACGCCGTAGAAGGAATTCAGCGCGAACggg > 1:459434/1‑150 (MQ=255) aCGGCAACAGTTCGCCGACCCCGTAGCGTATGGCCGCAGGACGACATGAAGGGGTAGCGGGGGTGAAGGGCACCCGC‑GATTCAGCGGGTGCCT‑CAGTCAGCCTATTTGTCCACGCTGACGCCGTAGAAGGAATTCAGCGCGAACGGGCTg > 1:1675408/1‑150 (MQ=255) aaCAGTTCGCCGACCCCGTAGCGTATGGCCGCAGGACGACATGAAGGGGTAGCGGGGGTGAAGGGCACCCGC‑GATTCAGCGGGTGCCt > 1:1709387/1‑88 (MQ=255) aaCAGTTCGCCGACCCCGTAGCGTATGGCCGCAGGACGACATGAAGGGGTAGCGGGGGTGAAGGGCACCCGC‑GATTCAGCGGGTGCCt < 2:1709387/88‑1 (MQ=255) aaCAGTTCGCCGACCCCGTAGCGTATGGCCGCAGGACGACATGAAGGGGTAGCGGGGGTGAAGGGCACCCGC‑GATTCAGCGGGTGCCT‑CAGTCAGCCTATTTGTCCACGCTGACGCCGTAGAAGGAATTCAGCGCGAACGGGCTGATCtt > 1:989204/1‑150 (MQ=255) aCAGTTCGCCGACCCCGTAGCGTATGGCCGCAGGACGACATGAAGGGGTAGCGGGGGTGAAGGGCACCCGC‑GATTCAGCGGGTGCCT‑CAGTCAGCCTATTTGTCCACGCTGACGCCGTAGAAGGAATTCAGCGCGAACGGGCTGATCTTg > 2:1750588/1‑150 (MQ=255) aGTTCGCCGACCCCGTAGCGTATGGCCGCAGGACGACATGAAGGGGTAGCGGGGGTGAAGGGCACCCGC‑GATTCAGCGGGTGCCT‑CAGTCAGCCTATTTGTCCACGCTGACGCCGTAGAAGGAATTCAGCGCGAACGGGCTGATCTTGaa < 2:245178/150‑1 (MQ=255) gTTCGCCGACCCCGTAGCGTATGGCCGCAGGACGACATGAAGGGGTAGCGGGGGTGAAGGGCACCCGC‑GATTCAGCGGGTGCCT‑CAGTCAGCCTATTTGTCCACGCTGACGCCGTAGAAGGAATTCAGCGCGAACGGGCTGATCTTGAAg < 1:1417453/150‑1 (MQ=255) ttCGCCGACCCCGTAGCGTATGGCCGCAGGACGACATGAAGGGGTAGCGGGGGTGAAGGGCACCCGC‑GATTCAGCGGGTGCCT‑CAGTCAGCCTATTTGTCCACGCTGACGCCGTAGAAGGAATTCAGCGCGAACGGGCTGATCTTGAAGt > 1:2013425/1‑150 (MQ=255) tCGCCGACCCCGTAGCGTATGGCCGCAGGACGACATGAAGGGGTAGCGGGGGTGAAGGGCACCCGC‑GATTCAGCGGGTGCCT‑CAGTCAGCCTATTTGTCCACGCTGACGCCGTAGAAGGAATTCAGCGCGAACGGGCTGATCTTGAAGTc < 2:1348157/150‑1 (MQ=255) gCCGACCCCGTAGCGTATGGCCGCAGGACGACATGAAGGGGTAGCGGGGGTGAAGGGCACCCGC‑GATTCAGCGGGTGCCT‑CAGTCAGCCTATTTGTCCACGCTGACGCCGTAGAAGGAATTCAGCGCGAACGGGCTGATCTTGAAGTCCt > 1:2078973/1‑150 (MQ=255) ccGACCCCGTAGCGTATGGCCGCAGGACGACATGAAGGGGTAGCGGGGGTGAAGGGCACCCGC‑GATTCAGCGGGTGCCT‑CAGTCAGCCTATTTGTCCACGCTGACGCCGTAGAAGGAATTCAGCGCGAACGGGCTGATCTTGAAGTCCtt < 2:2290595/150‑1 (MQ=255) cccGTAGCGTATGGCCGCAGGACGACATGAAGGGGTAGCGGGGGTGAAGGGCACCCGC‑GATTCAGCGGGTGCCT‑CAGTCAGCCTATTTGTCCACGCTGACGCCGTAGAAGGAATTCAGCGCGAACGGGCTGa < 1:1758775/132‑1 (MQ=255) cccGTAGCGTATGGCCGCAGGACGACATGAAGGGGTAGCGGGGGTGAAGGGCACCCGC‑GATTCAGCGGGTGCCT‑CAGTCAGCCTATTTGTCCACGCTGACGCCGTAGAAGGAATTCAGCGCGAACGGGCTGa > 2:1758775/1‑132 (MQ=255) cccGTAGCGTATGGCCGCAGGACGACATGAAGGCGTAGCGGAGGAGAAGTGCACGCGG‑GATTCAGCGGGTGCCTAAACTACGCCCTGCTGGGCA‑GCTGACGCCGTAGAAGGAATTCAGCGCGAACGGGCTGATCTTGAAGTCCTTCACCt > 1:1749194/1‑150 (MQ=255) ccGTAGCGTATGGCCGCAGGACGACATGAAGGGGTAGCGGGGGTGAAGGGCACCCGC‑GATTCAGCGGGTGCCT‑CAGTCAGCCTATTTGTCCACGCTGACGCCGTAGAAGGAATTCAGCGCGAACGGGCTGATCTTGAAGTCCTTCACCtt > 2:131379/1‑150 (MQ=255) cGTAGCGTATGGCCGCAGGACGACATGAAGGGGTAGCGGGGGTGAAGGGCACCCGC‑GATTCAGCGGGTGCCT‑CAGTCAGGCTATTTGTCCACGCTGACGCCGTAGAAGGAATTCAGCGCGAACGGACTGATCTTGAAGTCCTTCACCTTg > 1:2275005/1‑150 (MQ=255) cGTAGCGTATGGCCGCAGGACGACATGAAGGGGTAGCGGGGGTGAAGGGCACCCGC‑GATTCAGCGGGTGCCT‑CAGTCAGCCTATTTGTCCACGCTGACGCCGTAGAAGGAATTCAGCGCGAACGGGCTGATCTTGAAGTCCTTCACCTTg > 1:1980237/1‑150 (MQ=255) tATGGCCGCAGGACGACATGAAGGGGTAGCGGGGGTGAAGGGCACCCGC‑GATTCAGCGGGTGCCT‑CAGTCAGCCTATTTGTCCACGCTGACGCCGTAGAAGGAATTCAGCGCGAACGGGCTGATCTTGAAGTCCTTCACCTTGGCGCTCa > 2:1775583/1‑150 (MQ=255) gCCGCAGGACGACATGAAGGGGTAGCGGGGGTGAAGGGCACCCGC‑GATTCAGCGGGTGCCT‑CAGTCAGCCTATTTGTCCACGCTGACGCCGTAGAAGGAATTCAGCGCGAACGGGCTGATCTTGAAGTCCTTCACCTTGGCGCTCATggg > 1:2116798/1‑150 (MQ=255) gCCGCAGGACGACATGAAGGGGTAGCGGGGGTGAAGGGCACCCGC‑GATTCAGCGGGTGCCT‑CAGTCAGCCTATTTGTCCACGCTGACGCCGTAGAAGGAATTCAGCGCGAACGGGCTGATCTTGAAGTCCTTCACCTTGGCGCTCATggg > 1:920916/1‑150 (MQ=255) cGCAGGACGACATGAAGGGGTAGCGGGGGTGAAGGGCACCCGC‑GATTCAGCGGGTGCCT‑CAGTCAGCCTATTTGTCCACGCTGACGCCGTAGAAGGAATTCAGCGCGAACggg < 2:1582036/113‑1 (MQ=255) cGCAGGACGACATGAAGGGGTAGCGGGGGTGAAGGGCACCCGC‑GATTCAGCGGGTGCCT‑CAGTCAGCCTATTTGTCCACGCTGACGCCGTAGAAGGAATTCAGCGCGAACggg > 1:1582036/1‑113 (MQ=255) cGCAGGACGACATGAAGGGGTAGCGGGGGTGAAGGGCACCCGC‑GATTCAGCGGGTGCCT‑CAGTCAGCCTATTTGTCCACGCTGACGCCGTAGAAGGAATTCAGCGCGAACGGGCTGATCTTGAAGTCCTTCACCTTGGCGCTCATGGGCt > 1:1778711/1‑150 (MQ=255) gCAGGACGACATGAAGGGGTAGCGGGGGTGAAGGGCACCCGC‑GATTCAGCGGGTGCCT‑CAGTCAGCCTATTTGTCCACGCTGACGCCGTAGAAGGAATTCAGCGCGAACGGGCTGATCTTGAAGTCCTTCACCTTGGCGCTCATGGGCTg > 1:1118359/1‑150 (MQ=255) gCAGGACGACATGAAGGGGTAGCGGGGGTGAAGGGCACCCGC‑GATTCAGCGGGTGCCT‑CAGTCAGCCTATTTGTCCACGCTGACGCCGTAGAAGGAATTCAGCGCGAACGGGCTGATCTTGAAGTCCTTCACCTTGGCGCTCATGGGCTg < 1:867090/150‑1 (MQ=255) gCAGGACGACATGAAGGGGTAGCGGGGGTGAAGGGCACCCGC‑GATTAAGAAACAGCCT‑CAGTCAGCCTATTTGTCCACGCTGACGCCGTAGAAGGAATTCAGCGCGAACGGGCTGATCTTGAAGTCCTTCACCTTGGCGCTCATGGGCTg > 1:1376741/1‑150 (MQ=255) ggACGACATGAAGGGGTAGCGGGGGTGAAGTGCACCCGC‑GATTCAGCGGGTGCCT‑CAGTCAGCCTATTTGTCCACGCTGACGCCGTAGAAGGAATTCAGCGCGAACGGGCTTATCTTGAAGTCCTTCACCTTGGCGCTCATGGGCTGGTa < 2:1698143/150‑1 (MQ=255) gacATGAAGGGGTAGCGGGGGTGAAGGGCACCCGC‑GATTCAGCGGGTGCCT‑CAGTCAGCCTATTTGTCCACGCTGACGCCGTAGAAGGAATTCAGCGCGAACGGGCTGATCTTGAAGTCCTTCACCTTGGCGCTCATGGGCTGGTAGACa > 2:2276839/1‑150 (MQ=255) gacATGAAGGGGTAGCGGGGGTGAAGGGCACCCGC‑GATTCAGCGGGTGCCT‑CAGTCAGCCTATTTGTCCACGCTGACGCCGTAGAAGGAATTCAGCGCGAACGGGCTGATCTTGAAGTCCTTCACCTTGGCGCTCATGGGCTGGTAGACa > 2:1464092/1‑150 (MQ=255) cATGAAGGGGTAGCGGGGGTGAAGGGCACCCGC‑GATTCAGCGGGTGCCT‑CAGTCAGCCTATTTGTCCACGCTGACGCCGTAGAAGGAATTCAGCGCGAACGGGCTGATCTTGAAGTCCTTCACCTTGGCGCTCATGGGCTGGTAGACagt < 1:2276839/150‑1 (MQ=255) cATGAAGGGGTAGCGGGGGTGAAGGGCACCCGC‑GATTCAGCGGGTGCCT‑CAGTCAGCCTATTTGTCCACGCTGACGCCGTAGAAGGAATTCAGCGCGAACGGGCTGATCTTGAAGTCCTTCACCTTGGCGCTCATGGGCTGGTAGACagt < 1:1371486/150‑1 (MQ=255) aTGAAGGGGTAGCGGGGGTGAAGGGCACCCGC‑GATTCAGCGGGTGCCT‑CAGTCAGCCTATTTGTCCACGCTGACGCCGTAGAAGGAATTCAGCGCGAACGGGCTGATCTTGAAGTCCTTCACCTTGGCGCTCATGGGCTGGTAGACagtg < 2:181460/150‑1 (MQ=255) tGAAGGGGTAGCGGGGGTGAAGGGCACCCGC‑GATTCAGCGGGTGCCT‑CAGTCAGCCTATTTGTCCACGCTGACGCCGTAGAAGGAATTCAGCGCGAACGGGCTGATCTTGAAGTCCTTCACCTTGGCGCTCATGGGCTGGTAGACagtgg > 2:1646404/1‑150 (MQ=255) ggggTAGCGGGGGTGAAGGGCACCCGC‑GATTCAGCGGGTGCCT‑CAGTCAGCCTATTTGTCCACGCTGACGCCGTAGAAGGAATTCAgcgc > 1:1606860/1‑90 (MQ=255) ggggTAGCGGGGGTGAAGGGCACCCGC‑GATTCAGCGGGTGCCT‑CAGTCAGCCTATTTGTCCACGCTGACGCCGTAGAAGGAATTCAgcgc < 2:1606860/90‑1 (MQ=255) gggTAGCGGGGGTGAAGGGCACCCGC‑GATTCAGCGGGTGCCT‑CAGTCAGCCTATTTGTCCACTCTGACGCCGTAGAAGGAATTCAGCGCGAACGGGCTGATCTTGAAGTCCTTCACCTTGGCGCTCATGGGCTGGTAGACagtggagtgg > 2:2358163/1‑150 (MQ=255) gTAGCGGGGGTGAAGGGCACCCGC‑GATTCAGCGGGTGCCT‑CAGTCAGCCTATTTGTCCACGCTGACGCCGTAGAAGGAATTCAGCGCGAACGGGCTGATCTTGAAGTCCTTCACCTTGGCGCTCATGGGCTGGTAGACAGTGGAGTGGGc > 1:1256751/1‑150 (MQ=255) gTAGCGGGGGTGAAGGGCACCCGC‑GATTCAGCGGGTGCCT‑CAGTCAGCCTATTTGTCCACGCTGACGCCGGCGAAGGAATTCAGCGCGAACGGGCTGATCTTGAAGTCCTTCACCTTGGCGCTCATGGGCTGGTAGACAGTGGAGTGGGc > 1:853197/1‑150 (MQ=255) cGGGGGTGAAGGGCACCCGC‑GATTCAGCGGGTGCCT‑CAGTCAGCCTATTTGTCCACGCTGACGCCGTAGAAGGAATTCAGCGCGAACGGGCTGATCTTGAAGTCCTTCACCTTGGCGCTCATGGGCTGGTAGACAGTGGAGTGGGCGATc < 2:1694409/150‑1 (MQ=255) cGGGGGTGAAGGGCACCCGC‑GATTCAGCGGGTGCCT‑CAGTCAGCCTATTTGTCCACGCTGACGCCGTAGAAGGAATTCAGCGCGAACGGGCTGATCTTGAAGTCCTTCACCTTGGCGCTCATGGGCTGGTAGACAGTGGAGTGGGCGATc > 1:1694409/1‑150 (MQ=255) ggggTGAAGGGCACCCGC‑GATTCAGCGGGTGCCT‑CAGTCAGCCTATTTGTCCACGCTGACGCCGTAGAAGGAATTCAGCGCGAACGGGCTGATCTTGAAGTCCTTCACCTTGGCGCTCATGGGCTGGTAGACAGTGGAGTGGGCGATCgg < 2:920916/150‑1 (MQ=255) tGAAGGGCACCCGC‑GATTCAGCGGGTGCCT‑CAGTCAGCCTATTTGTCCACGCTGACGCCGTAGAAGGAATTCAGCGCGAACGGGCTGATCTTGAAGTCCTTCACCTTGGCGCTCATGGGCTGGTAGACAGTGGAGTGGGCGATCGGGGTg > 2:2092919/1‑150 (MQ=255) actgaggCACCCGCTGAATC‑GCGGGTGCCT‑CAGTCAGCCTATTTGTCCACGCTGACGCCGTAGAAGGAATTCAGCGCGAACGGGCTGATCTTGAAGTCCTTCACCTTGGCGCTCATGGGCTGGTAGACAGTGGAGTGGGCGATCggg < 2:155805/142‑1 (MQ=255) actgaggCACCCGCTGAATC‑GCGGGTGCCT‑CAGTCAGCCTATTTGTCCACGCTGACGCCGTAGAAGGAATTCAGCGCGAACGGGCTGATCTTGAAGTCCTTCACCTTGGCGCTCATGGGCTGGTAGACAGTGGAGTGGGCGATCggg > 1:155805/6‑147 (MQ=255) aaGGGCACCCGC‑GATTCAGCGGGTGCCT‑CAGTCAGCCTATTTGTCCACGCTGACGCCGTAGAAGGAATTCAGCGCGAACGGGCTGATCTTGAAGTCCTTCACCTTGGCGCTCATGGGCTGGTAGACAGTGGAGTGGGCGATCGGGGTGAt > 1:2004994/1‑150 (MQ=255) aGGGCACCCGC‑GATTCAGCGGGTGCCT‑CAGTCAGCCTATTTGTCCACGCTGACGCCGTAGAAGGAATTCAGCGCGAACGGGCTGATCTTGAAGTCCTTCACCTTGGCGCTCATGGGCTGGTAGACAGTGGAGTGGGCGATCGGGGTGATc < 1:1464092/150‑1 (MQ=255) cACCCGC‑GATTCAGCGGGTGCCT‑CAGTCAGCCTATTTGTCCACGCTGACGCCGTAGAAGGAATTCAGCGCGAACGGGCTGATCTTGAAGTCCTTCACCTTGACGCTCATGGGCTGGTAGACAGTGGAGTGGGCGATCGGGGTGATCGGTa > 1:1662290/1‑150 (MQ=255) aCCCGC‑GATTCAGCGGGTGCCT‑CAGTCAGCCTATTTGTCCACGCTGACGCCGTAGAAGGAATTCAGCGCGAACGGGCTGATCTTGAAGTCCTTCACCTTGGCGCTCATGGGCTGGTAGACAGTGGAGTGGGCGATCGGGGTGATCGGTAc < 2:2004994/150‑1 (MQ=255) ccGC‑GATTCAGCGGGTGCCT‑CAGTCAGCCTATTTGTCCACGCTGACGCCGTAGAAGGAATTCAgcgc > 2:1445821/1‑67 (MQ=255) ccGC‑GATTCAGCGGGTGCCT‑CAGTCAGCCTATTTGTCCACGCTGACGCCGTAGAAGGAATTCAgcgc < 1:1445821/67‑1 (MQ=255) ccGC‑GATTCAGCGGGTGCCT‑CAGTCAGCCTATTTGTCCACGCTGACGCCGTAGAAGGAATTCAGCGCGAACGGGCTGATCTTGAAGTCCTTCACCTTGGCGCTCATGGGCTGGTAGACAGTGGAGTGGGCGATCGGGGTGATCGGTACCt > 1:2315528/1‑150 (MQ=255) ccGC‑GATTCAGCGGGTGCCT‑CAGTCAGCCTATTTGTCCACGCTGACGCCGCAGAAGGACTTCAGCCCGAACGGGCTGATCTTCAAGTACTTCACCTCGGCGCTCATGGGCCGGTAGACAGTGCAGTGGGCGCTCGGCGCGATCGGCACCt > 2:81028/1‑150 (MQ=255) gc‑gATTCAGCGGGTGCCT‑CAGTCAGCCTATTTGTCCACGCTGACGCCGTAGAAGGAATTCAGCGCGAACGGGCTGATCTTGAAGTCCTTCACCTTGGCGCTCATGGGCTGGTAGACAGTGGAGTGGGCGATCGGGGTGATCGGTACCTGc > 1:102394/1‑150 (MQ=255) gc‑gATTCAGCGGGTGCCT‑CAGTCAGCCTATTTGTCCACGCTGACGCCGTAGAAGGAATTCAGCGCGAACGGGCTGATCTTGAAGTCCTTCACCTTGGCGCTCATGGGCTGGTAGACAGTGGAGAGGGCGAGCGGGGTGATCGGTACCTGc > 2:560391/1‑150 (MQ=255) | GCGGAAAGGCAGGTAACGTGGCGCATGGCAAATCCTTTTTCATCTGTTCGCGCCGCCTCCGGGTACGACTGACGGCAACAGTTCGCCGACCCCGTAGCGTATGGCCGCAGGACGACATGAAGGGGTAGCGGGGGTGAAGGGCACCCGC‑GATTCAGCGGGTGCCT‑CAGTCAGCCTATTTGTCCACGCTGACGCCGTAGAAGGAATTCAGCGCGAACGGGCTGATCTTGAAGTCCTTCACCTTGGCGCTCATGGGCTGGTAGACAGTGGAGTGGGCGATCGGGGTGATCGGTACCTGC > NC_002947/1026945‑1027240 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |