| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,178,755:1 | +A | 13.6% | intergenic (+54/+40) | guaA → / ← PP_1033 | glutamine‑hydrolyzing GMP synthase/sulfatase domain‑containing protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,178,755 | 1 | . | A | 13.6% | 266.3 / 42.8 | 81 | intergenic (+54/+40) | guaA/PP_1033 | glutamine‑hydrolyzing GMP synthase/sulfatase domain‑containing protein |
| Reads supporting (aligned to +/- strand): ref base . (36/34); new base A (6/5); total (42/39) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.91e-02 | |||||||||||
TGTCAGCGGTCGTATCATCAACGAAATCGACGGTATCTCGCGCGTTACCTACGACGTGTCGAGCAAGCCGCCTGCCACTATCGAGTGGGAGTGATCGGGTAGCCAGCCCAGGCTGGC‑ACCCGCAGGACGGATACACCAGAAAGCCCGC‑ATGATTGCGGGCTTTCTGGTTCTTGTTCGTTCAGATTGCTTATTCTTCTGGCTTTCTGGCAAATAGCGCTTTCTGGTAGGCGTTATAGGAAAGCAGCCTGCTCCTCACTGCGATGAACTCGTCACCCTCCACGCGTTGGGGGTGCTT > NC_002947/1178608‑1178902 | tGTCAGCGGTCGTATCATCAACGAAATCGACGGTATCTCGCGCGTTACCTACGACGTGTCGAGCAAGCCGCCTGCCACTATCGAGTGGGAGTGATCGGGTAGCCAGCCCAGGCTGGC‑ACCCGCAGGACGGATACACCAGAAAGCCCGC‑At > 2:1148533/1‑150 (MQ=255) tCAGCGGTCGTATCATCCACGAAAGCGGCGGTATCGCGCGCGTTACCTACGACGTGTCGAGCAAGCCTCCTGCCACTATCGAGTTGCAGTGATCGGGTAGCCAGCCCAGGCTGGC‑ACCCGCAGGACGGATACACCAGAAAGCCCGC‑aatc < 2:1761990/150‑4 (MQ=255) tCAGCGGTCGTATCATCAACGAAATCGACGGTATCTCGCGCGTTACCTACGACGTGTCGAGCAAGCCGCCTGCCACTATCGAGTGGGAGTGATCGGGTAGCCAGCCCAGGCTGGC‑ACCCGCAGGACGGATACACCAGAAAGCCCGC‑ATGa > 1:785763/1‑150 (MQ=255) ggTCGTATCATCAACGAAATCGACGGTATCTCGCGCGTTACCTACGACGTGTCGAGCAAGCCGCCTGCCACTATCGAGTGGGAGTGATCGGGTAGCCAGCCCAGGCTGGC‑ACCCGCAGGACGGATACACCAGAAAGCCCGC‑ATGATTGCg > 1:954374/1‑150 (MQ=255) catcaACGAAATCGACGGTATCTCGCGCGTTACCTACGACGTGTCGAGCAAGCCGCCTGCCACTATCGAGTGGGAGTGATCGGGTAGCCAGCCCAGGCTGGC‑ACCCGCAGGACGGATACACCAGAAAGCCCGC‑ATGATTGCGGGCTTTCt > 2:1244917/1‑150 (MQ=255) catcaACGAAATCGACGGTATCTCGCGCGTTACCTACGACGTGTCGAGCAAGCCGCCTGCCACTATCGAGTGGGAGTGATCGGGTAGCCAGCCCAGGCTGGC‑ACCCGCAGGACGGATACACCAGAAAGCCCGC‑AATCATGCGGGCTTTCt < 2:108495/150‑1 (MQ=255) atcaACGAAATCGACGGTATCTCGCGCGTTACCTACGACGTGTCGAGCAAGCCGCCTGCCACTATCGAGTGGGAGTGATCGGGTAGCCAGCCCAGGCTGGC‑ACCCGCAGGACGGATACACCAGAAAGCCCGCAATCA‑TGCGGGCTTTCTg < 2:776331/150‑1 (MQ=255) atcaACGAAATCGACGGTATCTCGCGCGTTACCTACGACGTGTCGAGCAAGCCGCCTGCCACTATCGAGTGGGAGTGATCGGGTAGCCAGCCCAGGCTGGC‑ACCCGCAGGACGGATACACCAGAAAGCCCGC‑ATGATTGCGGGCTTTCTg > 2:945640/1‑150 (MQ=255) atcaACGAAATCGACGGTATCTCGCGCGTTACCTACGACGTGTCGAGCAAGCCGCCTGCCACTATCGAGTGGGAGTGATCGGGTAGCCAGCCCAGGCTGGC‑ACCCGCAGGACGGATACACCAGAAAGCCCGC‑ATGATTGCGGGCTTTCTg > 2:692580/1‑150 (MQ=255) atcaACGAAATCGACGGTATCTCGCGCGTTACCTACGACGTGTCGAGCAAGCCGCCTGCCACTATCGAGTGGGAGTGATCGGGTAGCCAGCCCAGGCTGGC‑ACCCGCAGGACGGATACACCAGAAAGCCCGC‑AATCATGCGGGCTTTCTg < 2:377789/150‑1 (MQ=255) aaCGAAATCGACGGTATCTCGCGCGTTACCTACGACGTGTCGAGCAAGCCGCCTGCCACTATCGAGTGGGAGTGATCGGGTAGCCAGCCCAGGCTGGC‑ACCCGCAGGACGGATACACCAGAAAGCCCGC‑ATGATTGCGGGCTTTCTGGtt > 1:604872/1‑150 (MQ=255) aaCGAAATCGACGGTATCTCGCGCGTTACCTACGACGTGTCGAGCAAGCCGCCTGCCACTATCGAGTGGGAGTGATCGGGTAACCAGCCCAGGCTGGC‑ACCCGCAGGACGGATACACCAGAAAGCCCGC‑ATGATTGCGGGCTTTCTGGtt > 1:1619995/1‑150 (MQ=255) cGAAATCGACGGTATCTCGCGCGTTACCTACGACGTGTCGAGCAAGCCGCCTGCCACTATCGAGTGGGAGTGATCGGGTAGCCAGCCCAGGCTGGC‑ACCCGCAGGACGGCTACACCAGAAAGCCCGC‑ATGATGACGGGCTTTCTGTTTCt > 2:1722086/1‑150 (MQ=255) gAAATCGACGGTATCTCGCGCGTTACCTACGACGTGTCGAGCAAGCCGCCTGCCACTATCGAGTGGGAGTGATCGGGTAGCCAGCCCAGGCTGGC‑ACCCGCAGGACGGATACACCAGAAAGCCCGC‑ATGATTGCGGGCTTTCTGGTTCtt < 1:2058701/150‑1 (MQ=255) aaaTCGACGGTATCTCGCGCGTTACCTACGACGTGTCGAGCAAGCCGCCTGCCACTATCGAGTGGGAGTGATCGGGTAGCCAGCCCAGGCTGGC‑ACCCGCAGGACGGATACACCAGAAAGCCCGC‑ATGATTGCGGGCTTTCTGGTTCTTg < 1:945640/150‑1 (MQ=255) cGGTATCTCGCGCGTTACCTACGACGTGTCGAGCAAGCCGCCTGCCACTATCGAGTGGGAGTGATCGGGTAGCCAGCCCAGGCTGGC‑ACCCGCAGGACGGATACACCAGAAAGCCCGC‑ATGATTGCGGGCTTTCTGGTTCTTgttcgttc < 1:2314554/150‑1 (MQ=255) ggTATCTCGCGCGTTACCTACGACGTGTCGAGCAAGCCGCCTGCCACTATCGAGTGGGAGTGATCGGGTAGCCAGCCCAGGCTGGC‑ACCCGCAGGACGGATACACCAGAAAGCCCGC‑ATGATTGCGGGCTTTCTGGTTCTTGTTCGTTCa > 2:476548/1‑150 (MQ=255) tATCTCGCGCGTTACCTACGACGTGTCGAGCAAGCCGCCTGCCACTATCGAGTGGGAGTGATCGGGTAGCCAGCCCAGGCTGGC‑ACCCGCAGGACGGATACACCAGAAAGCCCGC‑ATGATTGCGGGCTTTCTGGTTCTTGTTCGTTCAGa < 2:104438/150‑1 (MQ=255) tcGCGCGTTACCTACGACGTGTCGAGCAAGCCGCCTGCCACTATCGAGTGGGAGTGATCGGGTAGCCAGCCCAGGCAAGG‑CCCACCAGGACGGATACACCAGAAAGCCCGC‑CTGATTGCGGGCTTTCTGGTTCTTGTTCGTTCAGATTGc > 1:2222963/1‑150 (MQ=255) cgcgTTACCTACGACGTGTCGAGCAAGCCGCCTGCCACTATCGAGTGGGAGTGATCGGGTAGCCAGCCCAGGCTGGC‑ACCCGCAGGACGGATACACCAGAAAGCCCGC‑ATGATTGCGGGCTTTCTGGTTCTTGTTCGTTCAGATTGCTTa < 2:832396/150‑1 (MQ=255) gcgTTACCTACGACGTGTCGAGCAAGCCGCCTGCCACTATCGAGTGGGAGTGATCGGGTAGCCAGCCCAGGCTGGC‑ACCCGCAGGACGGATACACCAGAAAGCCCGC‑ATGATTGCGGGCTTTCTGGTTCTTGTTCGTTCAGATTGCTTAt > 2:913257/1‑150 (MQ=255) aCCTACGACGTGTCGAGCAAGCCGCCTGCCACTATCGAGTGGGAGTGATCGGGTAGCCAGCCCAGGCTGGC‑ACCCGCGGGACGGATACACCAGAAAGCCCGC‑ATGATTGCGGGCTTTCTGGTTCTTGTTCGTTCAGATTGCTTAttcttc < 2:2040543/150‑1 (MQ=255) aCCTACGACGTGTCGAGCAAGCCGCCTGCCACTATCGAGTGGGAGTGATCGGGTAGCCAGCCCAGGCTGGC‑ACCCGCAGGACGGATACACCAGAAAGCCCGC‑ATGATTGCGGGCTTTCTGGTTCTTGTTCGTTCAGATTGCTTAttcttc < 1:913257/150‑1 (MQ=255) cTACGACGTGTCGAGCAAGCCGCCTGCCACTATCGAGTGGGAGTGATCGGGTAGCCAGCCCAGGCTGGC‑ACCCGCAGGACGGATACACCAGAAAGCCCGC‑ATGATTGCGGGCTTTCt < 1:1277927/117‑1 (MQ=255) cTACGACGTGTCGAGCAAGCCGCCTGCCACTATCGAGTGGGAGTGATCGGGTAGCCAGCCCAGGCTGGC‑ACCCGCAGGACGGATACACCAGAAAGCCCGC‑ATGATTGCGGGCTTTCt > 2:1277927/1‑117 (MQ=255) gcggAGCAAGGCGCCTGCCACTATCGAGTGGGAGTGATCGGGTAGCCAGCCCAGGCTGGC‑ACCCGCAGGACGGATACACCAGAAAGCCCGC‑ATGATTGCGGGCTTTCTGGTTCTTGTTCGTTCAGATTGCTTATTCTTCTGGCTTTCTgg < 2:1338910/147‑1 (MQ=255) aGCAAGCCGCCTGCCACTATCGAGTGGGAGTGATCGGGTAGCCAGCCCAGGCTGGC‑ACCCGCAGGACGGATACACCAGAAAGCCCGC‑ATGATTGCGGGCTTTCTGGTTCTTGTTCGTTCAGATTGCTTATTCTTCTGGCTTTCTGGCaaa < 1:2233272/150‑1 (MQ=255) acgccgccTGCCACTATCGAGTGGGAGTGATCGGGTAGCCAGCCCAGGCTGGC‑ACCCGCAGGACGGATACACCAGAAAGCCCGC‑ATGATTGCGGGCTTTCTGGTTCTTGTTCGTTCAGa > 2:2001632/3‑119 (MQ=255) acgccgccTGCCACTATCGAGTGGGAGTGATCGGGTAGCCAGCCCAGGCTGGC‑ACCCGCAGGACGGATACACCAGAAAGCCCGC‑ATGATTGCGGGCTTTCTGGTTCTTGTTCGTTCAGa < 1:2001632/117‑1 (MQ=255) gccgccTGCCACTATCGAGTGGGAGTGATCGGGTAGCCAGCCCAGGCTGGC‑ACCCGCAGGACGGATACACCAGAAAGCCCGCAATCA‑TGCGGGCTTTCTg < 1:672093/100‑1 (MQ=38) gccgccTGCCACTATCGAGTGGGAGTGATCGGGTAGCCAGCCCAGGCTGGC‑ACCCGCAGGACGGATACACCAGAAAGCCCGCAATCA‑TGCGGGCTTTCTg > 2:672093/1‑100 (MQ=38) ccgccTGCCACTATCGAGTGGGAGTGATCGGGTAGCCAGCCCAGGCTGGC‑ACCCGCAGGACGGATACACCAGAAAGCCCGC‑ATGATTGCGGGCTTTCTg < 1:584563/99‑1 (MQ=255) ccgccTGCCACTATCGAGTGGGAGTGATCGGGTAGCCAGCCCAGGCTGGC‑ACCCGCAGGACGGATACACCAGAAAGCCCGC‑ATGATTGCGGGCTTTCTg > 2:584563/1‑99 (MQ=255) cgccTGCCACTATCGAGTGGGAGTGAGCGGGTAGCCAGCCCAGGCTGGG‑ACCCGCAGGACGGATACACCAGAAAGCCCGC‑ATGATTGCGGGCTTTCTGGTTCTTGTTCGTTCAGATTGCTTATTCTTCTGGCTTTCTGGCAAATAGCGCt < 2:1155085/150‑1 (MQ=255) gCCACTATCGAGTGGGAGTGATCGGGTCGCCAGCCCAGGCTGGC‑ACCCGCAGGACGGATACACCAGAAAGCCCGC‑ATGATTGCGGGCTTTCTGGTTCTTGTTCGTTCAGATTGCTTATTCTTCTGGCTTTCTGGCAAATAGCGCTTTCTg < 2:107280/150‑1 (MQ=255) cACTATCGAGTGGGAGTGATCGGGTAGCCAGCCCAGGCTGGC‑ACCCGCAGGACGGATACACCAGAAAGCCCGC‑ATGATTGCGGGCTTTCTGGTTCTTGTTCGTTCAGATTGCTTATtcttct > 2:1520597/1‑122 (MQ=255) cACTATCGAGTGGGAGTGATCGGGTAGCCAGCCCAGGCTGGC‑ACCCGCAGGACGGATACACCAGAAAGCCCGC‑ATGATTGCGGGCTTTCTGGTTCTTGTTCGTTCAGATTGCTTATtcttct < 1:1520597/122‑1 (MQ=255) cTATCGAGTGGGAGTGATCGGGTAGCCAGCCCAGGCTGGC‑ACCCGCAGGACGGATACACCAGAAAGCCCGC‑ATGATTGCGGGCTTTCTGGTTCTTGTTCGTTCAGATTGCTTATTCTTCTGGCTTTCTGGCAAATAGCGCTTTCTGGTAg < 2:785763/150‑1 (MQ=255) cGAGTGGGAGTGATCGGGTAGCCAGCCCAGGCTGGC‑ACCCGCAGGACGGATACACCAGAAAGCCCGC‑ATGATTGCGGGCTTTCTGGTTCTTGTTCGTTCAGATTGCTTATTCTTCTGGCTTTCTGGCAAATAGCGCTTTCTGGTAGGCGt > 2:295308/1‑150 (MQ=255) gTGGGAGTGATCGGGTAGCCAGCCCAGGCTGGC‑ACCCGCAGGACGGATACACCAGAAAGCCCGC‑ATGATTGCGGGCTTTCTGGTTCTTGTTCGTTCAGATTGCTTATTCTTCTGGCTTTCTGGCAAATAGCGCTTTCTGGTAGGCGTtat < 2:847070/150‑1 (MQ=255) tGGGAGTGATCGGGTAGCCAGCCCAGGCTGGC‑ACCCGCAGGACGGATACACCAGAAAGCCCGC‑ATGATTGCGGGCTTTCTGGTTCTTGTTCGTTCAGATTGCTTATTCTTCTGGCTTTCTGGCAAATAGCGCTTTCTGGTAGGCGTtata < 2:954374/150‑1 (MQ=255) ggAGTGATCGGGTAGCCAGCCCAGGCTGGC‑ACCCGCAGGACGGATACACCAGAAAGCCCGC‑ATGATTGCGGGCTTTCTGGTTCTTGTTCGTTCAGATTGCt > 1:1735909/1‑101 (MQ=255) ggAGTGATCGGGTAGCCAGCCCAGGCTGGC‑ACCCGCAGGACGGATACACCAGAAAGCCCGC‑ATGATTGCGGGCTTTCTGGTTCTTGTTCGTTCAGATTGCt < 2:1735909/101‑1 (MQ=255) ggAGTGATCGGGTAGCCAGCCCAGGCTGGC‑ACCCGCAGGACGGATACACCAGAAAGCCCGC‑ATGATTGCGGGCTTTCTGGTTCTTGTTCGTTCAGATTGCTTATTCTTCTGGCTTTCTGGCAAATAGCGCTTTCTGGTAGGCGTTATAgg > 1:1717271/1‑150 (MQ=255) ggAGTGATCGGGTAGCCAGCCCAGGCTGGA‑ACCCGCAGGACGGATACACCAGAAAGCCCGC‑ATGATTGCGGGCTTTCTGGTTCTTGTTCGTTCAGATTGCTTATTCTTCTGGCTTTCTgg > 1:1865800/1‑120 (MQ=255) ggAGTGATCGGGTAGCCAGCCCAGGCTGGA‑ACCCGCAGGACGGATACACCAGAAAGCCCGC‑ATGATTGCGGGCTTTCTGGTTCTTGTTCGTTCAGATTGCTTATTCTTCTGGCTTTCTgg < 2:1865800/120‑1 (MQ=255) aGTGATCGGGTAGCCAGCCCAGGCTGGC‑ACCCGCAGGACGGATACACCAGAAAGCCCGC‑ATGATTGCGGGCTTTCTGGTTCTCGTTCGTTCAGATTGCTTATTCTTCTGGCTTTCTGGCAAATAGCGCTTTCTGGTAGGCGTtata < 1:280907/146‑1 (MQ=255) aGTGATCGGGTAGCCAGCCCAGGCTGGC‑ACCCGCAGGACGGATACACCAGAAAGCCCGC‑ATGATTGCGGGCTTTCTGGTTCTCGTTCGTTCAGATTGCTTATTCTTCTGGCTTTCTGGCAAATAGCGCTTTCTGGTAGGCGTtata > 2:280907/1‑146 (MQ=255) aTCGGGTAGCCAGCCCAGGCTGGC‑ACCCGCAGGACGGATACACCAGAAAGCCCGC‑ATGATTGCGGGCTTTCTGGTTCTTGTTCGTTCAGATTGCTTATTCTTCTGGCTTTCTGGCAAATAGCGCTTTCTGGTAGGCGTTATAGGAAagca > 1:2390251/1‑150 (MQ=255) gccagccTGGGCTGGCTACCCGCAGGACGGATACACCAGAAAGCCCGC‑ATGAt > 2:1608597/1‑53 (MQ=21) gccagccTGGGCTGGCTACCCGCAGGACGGATACACCAGAAAGCCCGC‑ATGAt < 1:1608597/53‑1 (MQ=21) gccCAGGCTGGC‑ACCCGCAGGACGGATACACCAGAAAGCCCGC‑ATGATTGCGGGCTTTCTGGTTCTTGTTCGTTCAGATTGCTTATTCTTCTGGCTTTCTGGCAAATAGCGCTTTCTGGTAGGCGTTATAGGAAAGCAGCCTGCTCCTCa > 1:1126793/1‑150 (MQ=255) cccAGGCTGGC‑ACCCGCAGGACGGATACACCAGAAAGCCCGC‑ATGATTGCGGGCTTTCTGGTTCTTGTTCGTTCAGATTGCTTATTCTTCTGGCTTTCTGGCAAATAGCGCTTTCTGGTAGGCGTTATAGGAAAGCAGCCTGCTCCTCAc < 1:1148533/150‑1 (MQ=255) tgggCTGGC‑ACCCGCAGGACGGATACACCAGAAAGCCCGC‑ATGATTGCGGGCTTTCTGGTTCTTGTTCGTTCAGATTGCTTa > 2:480429/3‑82 (MQ=255) tgggCTGGC‑ACCCGCAGGACGGATACACCAGAAAGCCCGC‑ATGATTGCGGGCTTTCTGGTTCTTGTTCGTTCAGATTGCTTa < 1:480429/80‑1 (MQ=255) gCTGGC‑ACCCGCAGGACGGATACACCAGAAAGCCCGC‑ATGATTGCGGGCTTTCTGGTTCTTGTTCGTTCAGATTGCTTATTCTTCTGGCTTTCTGGCAAATAGCGCTTTCTGGTAGGCGTTATAGGAAAGCAGCCTGCTCCTCACTGCGa < 1:1244917/150‑1 (MQ=255) gCTGGC‑ACCCGCAGGACGGATACACCAGAAAGCCCGC‑ATGATTGCGGGCTTTCTGGTTCTTGTTCGTTCAGATTGCTTATTCTTCTGGCTTTCTGGCAAATAGCGCTTTCTGGTAGGCGTTATAGGAAAGCAGCCTGCTCCTCACTGCGa < 2:2222963/150‑1 (MQ=255) tGGC‑ACCCGCAAGAAGGAAACACTAGAAAGCCCGC‑ATGATTGCGGGCTTTCTGGTTCTTGTTCGTTCAGATTGCTTATTCTTCTGGCTTTCTGGCAAATAGCGCTTTCTGGTAGGCGTTATAGGAAAGCAGCCTGCTCCTCACTGCGATg > 2:2021259/1‑150 (MQ=255) gC‑ACCCGCAGGACGGATACACCAGAAAGCCCGC‑ATGATTGCGGGCTTTCTGGTTCTTGTTCGTTCAGATTGCTTATTCTTCTGGCTTTCTGGCAAATAGCGCTTTCTGGTAGGCGTTATAGGAAAGCAGCCTGCTCCTCACTGCGATGaa < 2:302991/150‑1 (MQ=255) aGGACGGATACACCAGAAAGCCCGC‑ATGATTGCGGGCTTTCTGGTTCTTGTTCGTTCAGATTGCTTATTCTTCTGGCTTTCTGGCAAATAGCGCTTTCTGGTAGGCGTTATAGGAAAGCAGCCTGCTCCTCACTGCGATGAACTCGTCAc > 2:1539517/1‑150 (MQ=255) gACGGATACACCAGAAAGCCCGC‑ATGATTGCGGGCTTTCTGGTTCTTGTTCGTTCAGATTGCTTATTCTTCTGGCTTTc < 2:859289/79‑1 (MQ=255) gACGGATACACCAGAAAGCCCGC‑ATGATTGCGGGCTTTCTGGTTCTTGTTCGTTCAGATTGCTTATTCTTCTGGCTTTc > 1:859289/1‑79 (MQ=255) aagaacCAGAAAGCCCGCAATCA‑TGCGGGCTTTCTGGTTCTTGTTCGTTCAGATTGCTTATTCTTCTGGCTTTCTGGCaaa > 2:664412/5‑81 (MQ=21) aagaacCAGAAAGCCCGCAATCA‑TGCGGGCTTTCTGGTTCTTGTTCGTTCAGATTGCTTATTCTTCTGGCTTTCTGGCaaa < 1:664412/77‑1 (MQ=21) cacCAGAAAGCCCGC‑ATGATTGCGGGCTTTCTGGTTCTTGTTCGTTCAGATTGCTTATTCTTCTGGCTTTCTGGCAAATAGCGCTTTCTGGTAGGCGTTATAGGAAAGCAGCCTGCTCCTCACTGCGATGAACTCGTCACCCTCCAcgcg > 2:2395661/1‑150 (MQ=255) cacCAGAAAGCCCGC‑ATGATTGCGGGCTTTCTGGTTCTTGTTCGTTCAGATTGCTTATTCTTCTGGCTTTCTGGCAAATAGCGCTTTCTGGTAGGCGTTATAGGAAAGCAGCCTGCTCCTCACTGCGATGAACTCGTCACCCTCCAcgcg < 2:1619995/150‑1 (MQ=255) cAGAAAGCCCGCAATCA‑TGCGGGCTTTCTGGTTCTTGTTCGTTCAGATTGCTTATTCTTCTGGCTTTCTGGCAAATAGCGCTTTCTGGTAGGCGTTATAGGaaa > 1:484854/1‑104 (MQ=38) cAGAAAGCCCGCAATCA‑TGCGGGCTTTCTGGTTCTTGTTCGTTCAGATTGCTTATTCTTCTGGCTTTCTGGCAAATAGCGCTTTCTGGTAGGCGTTATAGGaaa < 2:484854/104‑1 (MQ=38) cAGAAAGCCCGCAATCA‑TGCGGGCTTTCTGGTTCTTGTTCGTTCAGATTGCTTATTCTTCTGGCTTTCTGGCAAATAGCGCTTTCTGGTAGGCGTTATAGGa < 2:939931/102‑1 (MQ=38) cAGAAAGCCCGC‑AATCATGCGGGCTTTCTGGTTCTTGTTCGTTCAGATTGCTTATTCTTCTGGCTTTCTGGCAAATAGCGCTTTCTGGTAGGCGTTATAGGa > 1:939931/1‑102 (MQ=38) cAGAAAGCCCGC‑AATCATGCGAGCTTTCAGGTTCTTGTTCGTTCAGATTGCTTATTCTTCTGGCTTTCTGGCAAATAGCGCTTTCTGGTATGCGTTATAGGAAATAAACCTGCTCCTCACTGCGATGAGCTCGTCACCAGCCCCGCGTTg > 2:295255/1‑150 (MQ=255) gAAAGCCCGCAATCA‑TGCGGGCTTTCTGGTTCTTGTTCGTTCAGATTGCTTATTCTTCTGGCTTTCTGGCAAATAGCGCTTTCTGGTAGGCGTTATAGGAAAGCAGCCTGCTCCTCACTGCGATGAACTCGTCACCCTCCACGCGTTggg > 1:1614924/1‑150 (MQ=255) gAAAGCCCGCAATCA‑TGCGGGCTTTCTGGTTCTTGTTCGTTCAGATTGCTTATTCTTCTGGCTTTCTGGCAAATAGCGCTTTCTGGTAGGCGTTATAGGAAAGCAGCCTGCTCCTCACTGCGATGAACTCGTCACCCTCCACGCGTTggg > 2:2012491/1‑150 (MQ=255) gAAAGCCCGCAATCA‑TGCGGGCTTTCTGGTTCTTGTTACTTCAGATTAATTATGGTTCTGGCTTGCTGGCCAAAATCGCGTTCTGGTAGGCGTTATAGGAAAGCAGCCTGCTCCTCACTGCGATGAACTCGTCACCCTCCACGCGTTggg > 1:44843/1‑150 (MQ=255) aaGCCCGC‑ATGATTGCGGGCTTTCTGGTTCTTGTTCGTTCAGATTGCTTATTCTTCTGGCTTTCTGGCAAATAGCGCTTTCTGGTAGGCGTTATAGGAAAGCAGCCTGctc < 1:228328/111‑1 (MQ=255) aaGCCCGC‑ATGATTGCGGGCTTTCTGGTTCTTGTTCGTTCAGATTGCTTATTCTTCTGGCTTTCTGGCAAATAGCGCTTTCTGGTAGGCGTTATAGGAAAGCAGCCTGctc > 2:228328/1‑111 (MQ=255) cccGC‑ATGATTGCGGGCTTTCTGGTTCTTGTTCGTTCAGATTGCTTATTCTTCTGGCTTTCTGGCAAATAGCGCTTTCTGGTAGGCGTTATAGGAAAGCAGCCTGCTCCTCACTGCGa < 1:1242358/118‑1 (MQ=255) cccGC‑ATGATTGCGGGCTTTCTGGTTCTTGTTCGTTCAGATTGCTTATTCTTCTGGCTTTCTGGCAAATAGCGCTTTCTGGTAGGCGTTATAGGAAAGCAGCCTGCTCCTCACTGCGa > 2:1242358/1‑118 (MQ=255) ccGC‑ATGATTGCGGGCTTTCTGGTTCTTGTTCGTTCAGATTGCTTATTCTTCTGGCTTTCTGGCAAATAGCGCTTTCTGGTAGGCGTTATAGGAAAGCAGCCTGCTCCTCACTGCGATGAACTCGTCACCCTCCAcgc > 1:1715079/1‑138 (MQ=255) ccGC‑ATGATTGCGGGCTTTCTGGTTCTTGTTCGTTCAGATTGCTTATTCTTCTGGCTTTCTGGCAAATAGCGCTTTCTGGTAGGCGTTATAGGAAAGCAGCCTGCTCCTCACTGCGATGAACTCGTCACCCTCCAcgc < 2:1715079/138‑1 (MQ=255) cGC‑ATGATTGCGGGCTTTCTGGTTCTTGTTCGTTCAGATTGCTTATTCTTCTGGCTTTCTGGCAAATAGCGCTTTCTGGTAGGCGTTATAGGAAAGCAGCCTGCTCCTCACTGCGATGAACTCGTCACCCTCCACGCGTTGGGGGTGCtt > 2:495683/1‑150 (MQ=255) cGC‑ATGATTGCGGGCTTTCTGGTTCTTGTTCGTTCAGATTGCTTATTCTTCTGGCTTTCTGGCAAATAGCGCTTTCTGGTAGGCGTTATAGGAAAGCAGCCTGCTCCTCACTGCGATGAACTCGTCACCCTCCACGCGTTGGGGGTGCtt > 1:606718/1‑150 (MQ=255) c‑ATGATTGCGGGCTTTCTGGTTCTTGTTCGTTCAGATTGCTTATTCTTCTGGCTTTCTGGCAAATAGCGCTTTCTGGTAGGCGTTATAGGAAagca < 2:362576/96‑1 (MQ=255) c‑ATGATTGCGGGCTTTCTGGTTCTTGTTCGTTCAGATTGCTTATTCTTCTGGCTTTCTGGCAAATAGCGCTTTCTGGTAGGCGTTATAGGAAagca > 1:362576/1‑96 (MQ=255) | TGTCAGCGGTCGTATCATCAACGAAATCGACGGTATCTCGCGCGTTACCTACGACGTGTCGAGCAAGCCGCCTGCCACTATCGAGTGGGAGTGATCGGGTAGCCAGCCCAGGCTGGC‑ACCCGCAGGACGGATACACCAGAAAGCCCGC‑ATGATTGCGGGCTTTCTGGTTCTTGTTCGTTCAGATTGCTTATTCTTCTGGCTTTCTGGCAAATAGCGCTTTCTGGTAGGCGTTATAGGAAAGCAGCCTGCTCCTCACTGCGATGAACTCGTCACCCTCCACGCGTTGGGGGTGCTT > NC_002947/1178608‑1178902 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |