| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,993,644:1 | +T | 5.9% | intergenic (+39/+59) | PP_1780 → / ← PP_1781 | mannosyltransferase/acyltransferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,993,644 | 1 | . | T | 5.9% | 404.8 / 18.7 | 101 | intergenic (+39/+59) | PP_1780/PP_1781 | mannosyltransferase/acyltransferase |
| Reads supporting (aligned to +/- strand): ref base . (44/51); new base T (3/3); total (47/54) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.75e-01 | |||||||||||
Only 100 of 106 total aligned reads displayed.
GAGATGCCTTGGCTACATTGGAGTGAAAGTGCAGCTGAACTAAAACGCCTGGTGTTGGATGTTACGGAAAATACTCAGCTGAAGCATAAGGCGCCTGCTCAAGCGCACTGATTGCGTACGCTTGGCCATCCATGAACCCTGCAGTGCGGC‑GCAGCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGAGGCACGCAGTAAACGCGCTTATCCGGCTACGGGCACAGCCTGGCGACGCTGGCGCAGATAGCGTTGAGCCGGGCGTTCCAGCCAGCGGTGGGTCAACAGGCTTAGCGG > NC_002947/1993495‑1993792 | gagaTGCCTTGGCTACATTGGAGTGAAAGTGCAGCTGAACTAAAACGCCTGGTGTTGGATGTTACGGAAAATACTCAGCTGAAGCATAAGGCGCCTGCTCAAGCGAACTGATTGCGTACGCTTGGCCATCCATGAACCCTGCAGTgcggc < 2:956005/150‑1 (MQ=255) gaTGCCTTGGCTACATTGGAGTGAAAGTGCAGCTGAACTAAAACGCCTGGTGTTGGATGTTACGGAAAATACTCAGCTGAAGCATAAGGCGCCTGCTCAAGCGCACTGATTGCGTACGCTTGGCCATCCATGAACCCTGCAGTGCGgc‑gc > 1:1415443/1‑150 (MQ=255) ccTTGGCTACATTGGAGTGAAAGTGCAGCTGAACTAAAACGCCTGGTGTTGGATGTTACGGAAAATACTCAGCTGAAGCATAAGGCGCCTGCTCAAGCGCACTGATTGCGTACGCTTGGCCATCCATGAACCCTGCAGTGCGGC‑GCAGcc < 1:637682/150‑1 (MQ=255) ggCTACATTGGAGTGAAAGTGCAGCTGAACTAAAACGCCTGGTGTTGGATGTTACGGAAAATACTCAGCTGAAGCATAAGGCGCCTGCTCAAGCGCACTGATTGCGTACGCTTGGCCATCCATGAACCCTGCAGTGCGGC‑GCAGCCGCAc < 1:756488/150‑1 (MQ=255) tACATTGGAGTGAAAGTGCAGCTGAACTAAAACGCCTGGTGTTGGATGTTACGGAAAATACTCAGCTGAAGCATAAGGCGCCTGCTCAAGCGCACTGATTGCGTACGCTTGGCCATCCATGAACCCTGCAGTGCGGC‑TGCGCCGCACTGc > 2:2036444/1‑150 (MQ=255) tACATTGGAGTGAAAGTGCAGCTGAACTAAAACGCCTGGTGTTGGATGTTACGGAAAATACTCAGCTGAAGCATAAGGCGCCTGCTCAAGCGCACTGATTGCGTACGCTTGGCCATCCATGAACCCTGCAGTGCGGC‑GCAGCCGCACTGc < 2:1367341/150‑1 (MQ=255) aCATTGGAGTGAAAGTGCAGCTGAACTAAAACGCCTGGTGTTGGATGTTACGGAAAATACTCAGCTGAAGCATAAGGCGCCTGCTCAAGCGCACTGATTGCGTACGCTTGGCCATCCATGAACCCTGCAGTGCGGC‑TGCGCCGCACTGCa < 1:2036444/150‑1 (MQ=255) aCATTGGAGTGAAAGTGCAGCTGAACTAAAACGCCTGGTGTTGGATGTTACGGAAAATACTCAGCTGAAGCATAAGGCGCCTGCTCAAGCGCACTGATTGCGTACGCTTGGCCATCCATGAACCCTGCAGTGCGGC‑GCAGCCGCACTGCa < 1:482546/150‑1 (MQ=255) ttGGAGTGAAAGTGCAGCTGAACTAAAACGCCTGGTGTTGGATGTTACGGAAAATACTCAGCTGAAGCATAAGGCGCCTGCTCAAGCGCACTGATTGCGTACGCTTGGCCATCCATGAACCCTGCAGTGCGGCTGC‑GCCGCACTGCAggg < 2:1755534/150‑1 (MQ=255) ttGGAGTGAAAGTGCAGCTGAACTAAAACGCCTGGTGTTGGATGTTACGGAAAATACTCAGCTGAAGCATAAGGCGCCTGCTCAAGCGCACTGATTGCGTACGCTTGGCCATCCATGAACCCTGCAGTGCGGCTGC‑GCCGCACTGCAggg < 2:2276224/150‑1 (MQ=255) ttGGAGTGAAAGTGCAGCTGAACTAAAACGCCTGGTGTTGGATGTTACGGAAAATACTCAGCTGAAGCATAAGGCGCCTGCTCAAGCGCACTGATTGCGTACGCTTGGCCATCCATGAACCCTGCAGTGCGGC‑GCAGCCGCACTGCAggg > 2:132329/1‑150 (MQ=255) tGAAAGTGCAGCTGAACTAAAACGCCTGGTGTTGGATGTTACGGAAAATACTCAGCTGAAGCATAAGGCGCCTGCTCAAGCGCACTGATTGCGTACGCTTGGCCATCCATGAACCCTGCAGTGCGGC‑GCAGCCGCACTGCAGGGCTTTTg < 1:135758/150‑1 (MQ=255) tGCAGCTGAACTAAAACGCCTGGTGTTGGATGTTACGGAAAATACTCAGCTGAAGCATAAGGCGCCTGCTCAAGCGCACTGATTGCGTACGCTTGGCCATCCATGAACCCTGCAGTGCGGC‑GCAGCCGCACTGCAGGGCTTTTGCCatat > 1:1099521/1‑150 (MQ=255) ggCAGCTGAACTAAAACGCCTGGTATTGGATGTTACTGAAAATACTCAGCTGAAGCATAAGGCACAACTACAAGCGCACTGATTGCGTACGCTTGGCCATCCATGAACCCTGCAGTGCGGC‑GCAGCCGCACTGCAGGGCTTTTGCCatat < 1:655367/149‑1 (MQ=255) cAGCTGAACTAAAACGCCTGGTGTTGGATGTTACGGAAAATACTCAGCTGAAGCATAAGGCGCCTGCTCAAGCGCACTGATTGCGTACGCTTGGCCATCCATGAACCCTGCAGTGCGGC‑GCAGCCGCACTGCAGGGCTTTTGCCATATGa < 1:1015252/150‑1 (MQ=255) aGCTGAACTAAAACGCCTGGTGTTGGATGTTACGGAAAATACTCAGCTGAAGCATAAGGCGCCTGCTCAAGCGCACTGATTGCGTACGCTTGGCCATCCATGAACCCTGCAGTGCGGC‑GCAGCCGCACTGCAGGGCTTTTGCCATATGAc > 1:1068667/1‑150 (MQ=255) cTGAACTAAAACGCCTGGTGTTGGATGTTACGGAAAATACTCAGCTGAAGCATAAGGCGCCTGCTCAAGCGCACTGATTGCGTACGCTTGGCCATCCATGAACCCTGCAGTGCGGC‑GCAGCCGCACTGCAGGGCTTTTGCCATATGACtt < 1:1200525/150‑1 (MQ=255) cTGAACTAAAACGCCTGGTGTTGGATGTTACGGAAAATACTCAGCTGAAGCATAAGGCGCCTGCTCAAGCGCACTGATTGCGTACGCTTGGCCATCCATGAACCCTGCAGTGCGGC‑GCAGCCGCACTGCAGGGCTTTTGCCATATGACtt > 1:1804742/1‑150 (MQ=255) cTGAACTAAAACGCCTGGTGTTGGATGTTACGGAAAATACTCAGCTGAAGCATAAGGCGCCTGCTCAAGCGCACTGATTGCGTACGCTTGGCCATCCATGAACCCTGCAGTGCGGC‑GCAGCCGCACTGCAGGCCTTTTGCCATATGACtt < 1:1399020/150‑1 (MQ=255) tGAACTAAAACGCCTGGTGTTGGATGTTACGGAAAATACTCAGCTGAAGCATAAGGCGCCTGCTCAAGCGCACTGATTGCGTACGCTTGGCCATCCATGAACCCTGCAGTGCGGC‑GCAGCCGCACTGCAGGGCTTTTGCCATATGACTTg > 2:202306/1‑150 (MQ=255) aaCTAAAACGCCTGGTGTTGGATGTTACGGAAAATACTCAGCTGAAGCATAAGGCGCCTGCTCAAGCGCACTGATTGCGTACGCTTGGCCATCCATGAACCCTGCAGTGCGGC‑GCAGCCGCACTGCAGGGCTTTTGCCATATGACTTGTa < 1:132329/150‑1 (MQ=255) tAAAACGCCTGGTGTTGGATGTTACGGAAAATACTCAGCTGAAGCATAAGGCGCCTGCTCAAGCGCACTGATTGCGTACGCTTGGCCATCCATGAACCCTGCAGTGCGGC‑GCAGCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGa > 2:1816918/1‑150 (MQ=255) aaaCGCCTGGTGTTGGATGTTACGGAAAATACTCAGCTGAAGCATAAGGCGCCTGCTCAAGCGCACTGATTGCGTACGCTTGGCCATCCATGAACCCTGCAGTGCGGC‑GCAGCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGAgg < 1:202306/150‑1 (MQ=255) aCGCCTGGTGTTGGATGTTACGGAAAATACTCCGCTGAAGCATAAGGCGCCTGCTCAAGCGCACTGATTGCGTACGCTTGGCCATCCATGAACCCTGCAGTGCGGC‑GCAGCCGCACTGCAGGGCTTTTGc < 1:2244402/130‑1 (MQ=255) aCGCCTGGTGTTGGATGTTACGGAAAATACTCAGCTGAAGCATAAGGCGCCTGCTCAAGCGCACTGATTGCGTACGCTTGGCCATCCATGAACCCTGCAGTGCGGC‑GCAGCCGCACTGCAGGGCTTTTGc > 2:2244402/1‑130 (MQ=255) cGCCTGGTGTTGGATGTTACGGAAAATACTCAGCTGAAGCATAAGGCGCCTGCTCAAGCGCACTGATTGCGTACGCTTGGCCATCCATGAACCCTGCAGTGCGGC‑GCAGCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGa < 2:586330/145‑1 (MQ=255) cGCCTGGTGTTGGATGTTACGGAAAATACTCAGCTGAAGCATAAGGCGCCTGCTCAAGCGCACTGATTGCGTACGCTTGGCCATCCATGAACCCTGCAGTGCGGC‑GCAGCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGa > 1:586330/1‑145 (MQ=255) cGCCTGGTGTTGGATGTTACGGAAAATACTCAGCTGAAGCATAAGGCGCCTGCTCAAGCGCACTGATTGCGTACGCTTGGCCATCCATGAACCCTGCAGTGCGGC‑GCAGCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGAGGCAc < 2:1022453/150‑1 (MQ=255) gtgtTGGATGTTACGGAAAATACTCAGCTGAAGCATAAGGCGCCTGCTCAAGCGCACTGATTGCGTACGCTTGGCCATCCATGAACCCTGCAGTGCGGC‑GCAGCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGAGGCACGCAGTa < 2:48467/150‑1 (MQ=255) gtTGGATGTTACGGAAAATACTCAGCTGAAGCATAAGGCGCCTGCTCAAGCGCACTGATTGCGTACGCTTGGCCATCCATGAACCCTGCAGTGCGGC‑GCAGCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGAGGCACGCAGTaaa > 2:1953363/1‑150 (MQ=255) ttGGATGTTACGGAAAATACTCAGCTGAAGCATAAGGCGCCTGCTCAAGCGCACTGATTGCGTACGCTTGGCCATCCATGAACCCTGCAGTGCGGC‑GCAGCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGa > 2:1255466/1‑136 (MQ=255) ttGGATGTTACGGAAAATACTCAGCTGAAGCATAAGGCGCCTGCTCAAGCGCACTGATTGCGTACGCTTGGCCATCCATGAACCCTGCAGTGCGGC‑GCAGCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGa < 1:1255466/136‑1 (MQ=255) ttGGATGTTACGGAAAATACTCAGCTGAAGCATAAGGCGCCTGCTCAAGCGCACTGATTGCGTACGCTTGGCCATCCATGAACCCTGCAGTGCGGC‑GCAGCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGAGGCACGCAGTAAAc > 1:1431081/1‑150 (MQ=255) ggATGTTACGGAAAATACTCAGCTGAAGCATAAGGCGCCTGCTCAAGCGCACTGATTGCGTACGCTTGGCCATCCATGAACCCTGCAGTGCGGC‑GCAGCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGAGGCACGCAGTAAAcgc < 2:1452421/150‑1 (MQ=255) ggATGTTACGGAAAATACTCAGCTGAAGCATAAGGCGCCTGCTCAAGCGCACTGATTGCGTACGCTTGGCCATCCATGAACCCTGCAGTGCGGC‑GCAGCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGAGGCACGCAGTAAAcgc < 2:1099521/150‑1 (MQ=255) gATGTTACGGAAAATACTCAGCTGAAGCATAAGGCGCCTGCTCAAGCGCACTGATTGCGTACGCTTGGCCATCCATGAACCCTGCAGTGCGGCTGC‑GCCGCACTGCAg > 2:323795/1‑108 (MQ=39) gATGTTACGGAAAATACTCAGCTGAAGCATAAGGCGCCTGCTCAAGCGCACTGATTGCGTACGCTTGGCCATCCATGAACCCTGCAGTGCGGCTGC‑GCCGCACTGCAg < 1:323795/108‑1 (MQ=39) aCGGAAAATACTCAGCTGAAGCATAAGGCGCCTGCTCAAGCGCACTGATTGCGTACGCTTGGCCATCCATGAACCCTGCAGTGCGGC‑GCAGCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGAGGCACGCAGTAAACGCGCTTATc < 2:1431081/150‑1 (MQ=255) gAAAATACTCAGCTGAAGCATAAGGCGCCTGCTCAAGCGCACTGATTGCGTACGCTTGGCCATCCATGAACCCTGCAGTGCGGC‑GCAGCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGAGGCACGCAGTAAACGCGCTTATCCgg < 2:1516977/150‑1 (MQ=255) aCTCAGCTGAAGCATAAGGCGCCTGCTCAAGCGCACTGATTGCGTACGCTTGGCCATCCATGAACCCTGCAGTGCGGC‑GCAGCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGAGGCACGCAGTAAACGCGCTTATCCGGCTACgg < 2:1804742/150‑1 (MQ=255) aCTCAGCTGAAGCATAAGGCGCCTGCTCAAGCGCACTGATTGCGTACGCTTGGCCATCCATGAACCCTGCAGTGCGGC‑GCAGCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGAGGCACGCAGTAAACGCGCTTATCCGGCTACgg < 2:1068667/150‑1 (MQ=255) cTCAGCTGAAGCATAAGGCGCCTGCTCAAGCGCACTGATTGCGTACGCTTGGCCATCCATGAACCCTGCAGTGCGGC‑GCAGCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGAGGCACGCAGTAAACGCGCTTATCCGGCTACggg < 2:2357934/150‑1 (MQ=255) cTCAGCTGAAGCATAAGGCGCCTGCTCAAGCGCACTGATTGCGTACGCTTGGCCATCCATGAACCCTGCAGTGCGGC‑GCAGCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGAGGCACGCAGTAAACGCGCTTATCCGGCTACggg < 2:1303810/150‑1 (MQ=255) tCAGCTGAAGCATAAGGCGCCTGCTCAAGCGCACTGATTGCGTACGCTTGGCCATCCATGAACCCTGCAGTGCGGC‑GCAGCCGCAGTGCAGAGATTTTGCCATATGACTTGTGTGGGGCACGCAGTCAACGGGCTTATCGGGCTACgggg > 1:1167478/1‑149 (MQ=255) tCAGCTGAAGCATAAGGCGCCTGCTCAAGCGCACTGATTGCGTACGCTTGGCCATCCATGAACCCTGCAGTGCGGC‑GCAGCCGCACTGCa > 1:1843930/1‑90 (MQ=255) tCAGCTGAAGCATAAGGCGCCTGCTCAAGCGCACTGATTGCGTACGCTTGGCCATCCATGAACCCTGCAGTGCGGC‑GCAGCCGCACTGCa < 2:1843930/90‑1 (MQ=255) aGCTGAAGCATAAGGCGCCTGCTCAAGCGCACTGATTGCGTACGCTTGGCCATCCATGAACCCTGCAGTGCGGC‑GCAGCCGCACTGCAGGGCTTTTGCCata < 2:1067362/102‑1 (MQ=255) aGCTGAAGCATAAGGCGCCTGCTCAAGCGCACTGATTGCGTACGCTTGGCCATCCATGAACCCTGCAGTGCGGC‑GCAGCCGCACTGCAGGGCTTTTGCCata > 1:1067362/1‑102 (MQ=255) tGAAGCATAAGGCGCCTGCTCAAGCGCACTGATTGCGTACGCTTGGCCATCCATGAACCCTGCAGTGCGGC‑GCAGCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGAGGCACGCAGTAAACGCGCTTATCCGGCTACGGGCACAGc > 2:728944/1‑150 (MQ=255) gAAGCATAAGGCGCCTGCTCAAGCGCACTGATTGCGTACGCTTGGCCATCCATGAACCCTGCAGTGCGGC‑GCAGCCGCACTGCAGGGCTTTTGCCATATGACTTGTa < 1:994986/107‑1 (MQ=255) gCATAAGGCGCCTGCTCAAGCGCACTGATTGCGTACGCTTGGCCATCCATGAACCCTGCAGTGCGGC‑GCAGCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGAGGCACGCAGTAAACGCGCTTATCCGGCTACGGGCACAGCCTgg > 1:2407451/1‑150 (MQ=255) cgatcgggCGCCTGCTCAAGCGAACTGATTGCGTACGATTGGCCATACACGACCCCTGCAGTGCGGC‑GCAGCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGAGGCACGCAGTAAACGCGCTTATCCGGCTACGGGCACAGCCTgg < 2:507903/144‑1 (MQ=255) cATAAGGCGCCTGCTCAAGCGCACTGATTGCGTACGCTTGGCCATCCATGAACCCTGCAGTGCGGC‑GCAGCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGAGGCACGCAGTAAACGCGCTTATCCGGCTACGGGCACAGCCTGGc > 2:814719/1‑150 (MQ=255) tAAGGCGCCTGCTCAAGCGCACTGATTGCGTACGCTTGGCCATCCATGAACCCTGCAGTGCGGC‑GCAGCCGCACTGCAGGGCTTTTGcc < 2:2102746/89‑1 (MQ=255) tAAGGCGCCTGCTCAAGCGCACTGATTGCGTACGCTTGGCCATCCATGAACCCTGCAGTGCGGC‑GCAGCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGAGGCACGCAGTAAACGCGCTTATCCGGCTACGGGCACAGCCTGGCGa > 1:1276997/1‑150 (MQ=255) aaGGCGCCTGCTCAAGCGCACTGATTGCGTACGCTTGGCCATCCATGAACCCTGCAGTGCGGC‑GCAGCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGAGGCACGCAGTAAACGCGCTTATCCGGCTACGGGCACAGCCTGGCGAc > 1:1887047/1‑150 (MQ=255) ggCGCCTGCTCAAGCGCACTGATTGCGTACGCTTGGCCATCCATGAACCCTGCAGTGCGGC‑GCAGCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGAGGCACGCAGTAAACGCGCTTATCCGGCTACGGGCACAGCCTGGCGACGc < 1:2061743/150‑1 (MQ=255) gcgcCTGCTCAAGCGCACTGATTGCGTACGCTTGGCCATCCATGAACCCTGGAGTGCGGC‑GCAGCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGAg > 1:1376825/1‑101 (MQ=255) gcgcCTGCTCAAGCGCACTGATTGCGTACGCTTGGCCATCCATGAACCCTGCAGTGCGGC‑GCAGCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGAg < 2:1376825/101‑1 (MQ=255) gcgcCTGCTCAAGCGCACTGATTGCGTACGCTTGGCCATCCATGAACCCTGCAGTGCGGC‑GCAGCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGAGGCACGCAGTAAACTCGCTTATCCGGGTACGGGCACAGCCTGGcagatcg > 1:507903/1‑144 (MQ=255) gcCTGCTCAAGCGCACTGATTGCGTACGCTTGGCCATCCATGAACCCTGCATTGCGGC‑GCAGCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGAGGCACGCAGTAAACGCGCTTATCCGGCTACGGGCACAGCCTGGCGACGCTgg < 2:782679/150‑1 (MQ=255) gcCTGCTCAAGCGCACTGATTGCGTACGCTTGGCCATCCATGAACCCTGCAGTGCGGC‑GCAGCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGAGGCACGCAGTAAACGCGCTTATCCGGCTACGGGCACAGCCTg > 1:1527622/1‑140 (MQ=255) gcCTGCTCAAGCGCACTGATTGCGTACGCTTGGCCATCCATGAACCCTGCAGTGCGGC‑GCAGCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGAGGCACGCAGTAAACGCGCTTATCCGGCTACGGGCACAGCCTg < 2:1527622/140‑1 (MQ=255) ccTGCTCAAGCGCACTGATTGCGTACGCTTGGCCATCCATGAACCCTGCAGTGCGGC‑GCAGCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGAGGCACGCAGTAAACGCGCTTATCCGGCTACGGGCACAGCCTGGCGACGCTGgc > 1:1118444/1‑150 (MQ=255) tGCTCAAGCGCACTGATTGCGTACGCTTGGCCATCCATGAACCCTGCAGTGCGGC‑GCAGCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGAGGCACGCAGTAAACGCGCTTATCCGGCTACGGGCACAGCCTGGCGACGCTGgcgc > 1:143718/1‑150 (MQ=255) cACTGATTGCGTACGCTTGGCCATCCATGAACCCTGCAGTGCGGC‑GCAGCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGAGGCACGCAGTAAACGCGCTTATCCGGCTACGGGCACAGCCTGGCGACGCTGGCGCAGATAGCGtt > 1:267884/1‑150 (MQ=255) aCTGATTGCGTACGCTTGGCCATCCATGAACCCTGCAGTGCGGC‑GCAGCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGAGGCACGCAGTAAACGCGCTTATCCGGCTACGGGCACAGCCTg > 1:182245/1‑126 (MQ=255) aCTGATTGCGTACGCTTGGCCATCCATGAACCCTGCAGTGCGGC‑GCAGCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGAGGCACGCAGTAAACGCGCTTATCCGGCTACGGGCACAGCCTg < 2:182245/126‑1 (MQ=255) aCTGATTGCGTACGCTTGGCCATCCATGAACCCTGCAGTGCGGC‑GCAGCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGAGGCACGCAGTAAACGCGCTTATCCGGCTACGGGCACAGCCTGGCGACGCTGGCGCAGATAGCGTTg > 2:1989259/1‑150 (MQ=255) gATTGCGTACGCTTGGCCATCCATGAACCCTGCAGTGCGGC‑GCAGCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGAGGCACGCAGTAAACGCGCTTATc < 2:2060661/104‑1 (MQ=255) gATTGCGTACGCTTGGCCATCCATGAACCCTGCAGTGCGGC‑GCAGCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGAGGCACGCAGTAAACGCGCTTATc > 1:2060661/1‑104 (MQ=255) tttGCGTACGCTTGGAAATCCATGAAACCTGCAGTGCGGC‑GCAGCCGCACTGCAGGGCTTTTGCCATATGACTTGTATCAGGCACGCAGTAAACGCGCTTATCCGGCTACGGGCACAGCCTGGCGACGCTGGCGCAGATAGCGTTGAGcc < 2:1694457/149‑1 (MQ=255) aTTGCGTACGCTTGGCCATCCATGAACCCTGCAGTGCGGC‑GCAGCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGAGGCACGCAGTAAACGCGCTTATCCGGCTACGGGCACAGCCTGGCGACGCTGGCGCAGATAGCGTTGAGcc > 2:1705777/1‑150 (MQ=255) tGCGTACGCTTGGCCATCCATGAACCCTGCAGTGCGGC‑GCAGCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGAGGCACGCAGTAAACGCGCTTATCCGGCTACGGGCACAGCCTGGCGACGCTGGCGCAGATAGCGTTGAGCCgg < 1:728944/150‑1 (MQ=255) tGCGTACGCTTGGCCATCCATGAACCCTGCAGTGCGGC‑GCAGCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGAGGCACGCAGTAAACGCGCTTATCCGGCTACGGGCACAGCCTGGCGACGCTGGCGCAGATAGCGTTGAGCCgg < 1:1705777/150‑1 (MQ=255) tACGCTTGGCCATCCATGAACCCTGCAGTGCGGC‑GCAGCCGCACTGCAGAGCTTTTGCCATATGACTTGTATGAGGCACGCAGTAAACGCGCTTATCCGGCTACGGGCACAGCCTGGCGACGCTGGCGCAGATAGCGTTGAGCCGGGCGt > 2:2142591/1‑150 (MQ=255) gCTTGGCCATCCATGAACCCTGCAGTGCGGC‑GCAGCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGAGGCACGCAGTAAACGCGCTTATCCGGCTACGGGCACAGCCTGGCGACGCTGGCGCAGATAGCGTTGAGCCgg < 1:1996898/143‑1 (MQ=255) gCTTGGCCATCCATGAACCCTGCAGTGCGGC‑GCAGCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGAGGCACGCAGTAAACGCGCTTATCCGGCTACGGGCACAGCCTGGCGACGCTGGCGCAGATAGCGTTGAGCCgg > 2:1996898/1‑143 (MQ=255) cTTGGCCATCCATGAACCCTGCAGTGCGGC‑GCAGCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGAGGCACGCAGTAAACGCGCTTATCCGGCTACGGGCACAGCCTGGCGACGCTGGCGCAGATAGCGTTGAGCCGGGCGTTcca < 2:1415443/150‑1 (MQ=255) ttGGCCATCCATGAACCCTGCAGTGCGGC‑GCAGCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGAGGCACGCAGTAAACGCGCTTATCCGGCTACGGGCACAGCCTGGCGACGCTGGCGCAGATAGCGTTGAGCCGGGCGTTccag > 1:2027708/1‑150 (MQ=255) catccatGAACCCTGCAGTGCGGC‑GCAGCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGAGGCACGCAGTAAACGCGCTTATCCGGCTACGGGCACAGCCTGGCGACGCTGGCGCAGATAGCGTTGAGCCGGGCGTTCcagccagc > 1:2020619/1‑150 (MQ=255) atccatGAACCCTGCAGTGCGGC‑GCAGCCGCACTGCAGGGCTTTTGCCATATGCCTTGTATGAGGCACGCAGTAAACGCGCTTATCCGGCTACGGGCACAGCCTGGCGACGCTGGCGCAGATAGCGTTGAGCCGGGCGTTCCAGCCAGCg > 2:593104/1‑150 (MQ=255) tccatGAACCCTGCAGTGCGGC‑GCAGCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGAGGCACGCAGTAAACGCGCTTATCCGGCTACGGGCACAGCCTg < 2:1107826/104‑1 (MQ=255) tccatGAACCCTGCAGTGCGGC‑GCAGCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGAGGCACGCAGTAAACGCGCTTATCCGGCTACGGGCACAGCCTg > 1:1107826/1‑104 (MQ=255) ccatGAACCCTGCAGTGCGGC‑GCAGCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGAGGCACGCAGTAAACGCGCTTATCCGGCTACGGGCACAGCCTGGCGACGCTGGCGCAGATAGCGTTGAGCCGGGCGTTCCAGCCAGCGGt < 1:1989259/150‑1 (MQ=255) ccatGAACCCTGCAGTGCGGC‑GCAGCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGAGGCACGCAGTAAACGCGCTTATCCGGCTACGGGCACAGCCTGGCGACGCTGGCGCAGATAGCGTTGAGCCGGGCGTTCCAGCCAGCGGt < 1:1816918/150‑1 (MQ=255) catGAACCCTGCAGTGCGGC‑GCAGCCTCTCTGCAGGGCTGTTGCCATATTACTTGTATGAGGCACGCAGTAAACGCGCTTATCCGGCTACGGGCACAGCCTGGCGACGCTGGCGCAGATAGCGTTGAGCCGGGCGTTCCAGCCAGCGGTg < 2:2301284/150‑1 (MQ=255) catGAACCCTGCAGTGCGGC‑GCAGCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGAGGCACGCAGTAAACGCGCTTATCCGGCTACGGGCACAGCCTGGCGACGCTGGCGCAGATAGCGTTGAGCCGGGCGTTCCAGCCAGCGGTg < 2:1887047/150‑1 (MQ=255) atGAACCCTGCAGTGCGGC‑GCAGCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGAGGCACGCAGTAAACGCGCTTATCCGGCTACGGGCACAGCCTGGCGACGCTGGCGCAGATAGCGTTGAGCCGGGCGTTCCAGCCAGCGGTgg < 1:1509562/150‑1 (MQ=255) atGAACCCTGCAGTGCGGC‑GCAGCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGAGGCACGCAGTAAACGCGCTTATCCGGCTACGGGCACAGCCTGGCGACGCTGGCGCAGATAGCGTTGAGCCGGGCGTTCCAGCCAGCGGTgg > 2:1509562/1‑150 (MQ=255) atGAACCCTGCAGTGCGGC‑GCAGCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGAGGCACGCAGTAAACGCGCTTATCCGGCTACGGGCACAGCCTGGCGACGCTGGCGCAGATAGCGTTGAGCCGGGCGTTCCAGCCAGCGGTgg < 1:2142591/150‑1 (MQ=255) atGAACCCTGCAGTGCGGC‑GCAGCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGAGGCACGCAGTAAACGCGCTTATCCGGCTACGGGCACAGCCTGGCGACGCTGGCGCAGATAGCGTTGAGCCGGGCGTTCCAGCCAGCGGTgg < 1:593104/150‑1 (MQ=255) tGAACCCTGCAGTGCGGC‑GCAGCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGAGGCACGCAGTAAACGCGCTTATCCGGCTACGGGCACAGCCTGGCGACGCTGGCGCAGATAGCGTTGAGCCGGGCGTTCCAGCCAGCGGTggg > 2:2026370/1‑150 (MQ=255) ccTGCAGTGCGGC‑GCAGCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGAGGCACGCAGTAAACGCGCTTATCCGGCTACGGGCACAGCCTGGCGACGCTGGCGCAGATAGCGTTGAGCCGGGCGTTCCAGCCAGCGGTGGGTCAAc > 1:2408826/1‑150 (MQ=255) tGCAGTGCGGCTGC‑GCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGAGGCACGCAGTAAACGCGCTTATCCGGCTACGGGCACAGCCTGGCGACGCTGGCGCAGATAGCGTTGAGCCGGGCGTTCCAGCCAGCGGTGGGTCAACAg > 2:2356172/1‑150 (MQ=255) tGCAGTGCGGCTGC‑GCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGAGGCACGCAATAAACGCGCTTATCCGGCTACGGGCACAGCCTGGCGACGCTGGCGCAGATAGCGTTGAGCCGGGCGTTCCAGCCAGCGGTGGGTCAACAg > 1:309954/1‑150 (MQ=255) gTGCGGC‑GCAGCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGAGGCACGCAGTAAACGCGCTTATCCGGCTACGGGCACAGCCTGGCGACGCTGGCGCAGATAGCGTTGAGCCGGGCGTTCCAGCCAGCGGTGGGTCAACAGGCtt > 1:1669511/1‑150 (MQ=255) gc‑gcAGCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGAGGCACGCAGTAAACGCGCTTATCCGGCTACGGGCACAGCCTGGCGACGCTGGCGCAGATAGCGTTGAGCCGGGCGTTCCAGCCAGCGGTGGGTCAACAGGc < 2:336505/143‑1 (MQ=255) gc‑gcAGCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGAGGCACGCAGTAAACGCGCTTATCCGGCTACGGGCACAGCCTGGCGACGCTGGCGCAGATAGCGTTGAGCCGGGCGTTCCAGCCAGCGGTGGGTCAACAGGc > 1:336505/1‑143 (MQ=255) gc‑gcAGCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGAGGCACGCAGTAAACGCGCTTATCCGGCTACGGGCACAGCCTGGCGACGCTGGCGCAGATAGCGTTGAGCCGGGCGTTCCAGCCAGCGGTGGGTCAACAGGCTTAGCgg < 2:267884/150‑1 (MQ=255) | GAGATGCCTTGGCTACATTGGAGTGAAAGTGCAGCTGAACTAAAACGCCTGGTGTTGGATGTTACGGAAAATACTCAGCTGAAGCATAAGGCGCCTGCTCAAGCGCACTGATTGCGTACGCTTGGCCATCCATGAACCCTGCAGTGCGGC‑GCAGCCGCACTGCAGGGCTTTTGCCATATGACTTGTATGAGGCACGCAGTAAACGCGCTTATCCGGCTACGGGCACAGCCTGGCGACGCTGGCGCAGATAGCGTTGAGCCGGGCGTTCCAGCCAGCGGTGGGTCAACAGGCTTAGCGG > NC_002947/1993495‑1993792 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |