Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 2,200,006:1 +C 10.4% coding (829/1278 nt) PP_1944 → aminomethyltransferase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029472,200,0061.C10.4% 389.0 / 39.8 106coding (829/1278 nt)PP_1944aminomethyltransferase
Reads supporting (aligned to +/- strand):  ref base . (41/54);  new base C (5/6);  total (46/60)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.66e-01

Only 100 of 107 total aligned reads displayed.

GTTACTGACTACATGCCCGCGATTTTCGACCCAGAGATGGCGGGTTATCTCAAGGAATTCCGCGCGGGTATGCCAAGTTTTGCCTCGACTTTCAATGTTGCGGGGAGCTTTGAGTCGAATAAGGTAAGCGATTGGTATCGCAGCCCAGTCGAGCTGGGCTGGGCCAAAACCATCAAGTTCGATCACGACTTTATCGGTCGTGCCGCGTTGGAAAAAGAGGTTGCAGAGCCTCGACGGGTGATGCGCACCTTGGTTTGGAATGGTGATGACGTTGCAGATGTTCATGCCTCGCTGTTC  >  NC_002947/2199859‑2200155
                                                                                                                                                    |                                                                                                                                                     
gTTACTGACTACATGCCCGCGATTTTCGACCCAGAGATGGCGGGTTATCTCAAGGAATTCCGCGCGGGTATGCCAAGTTTTGCCTCGACTTTCAATGTTGCGGGGAGCTTTGAGTCGAATAAGGTAAGCGATTGGTATCGCAGCCCAGTc                                                                                                                                                     <  1:895814/150‑1 (MQ=255)
 ttACTGACTACATGCCCGCGATTTTCGACCCAGAGATGGCGGGTTATCTCAAGGAATTCCGCGCGGGTATGCCAAGTTTTGCCTCGACTTTCAATGTTGCGGGGAGCTTTGAGTCGAATAAGGTAAGCGATTGGTATCGCAGCCCAGTCg                                                                                                                                                    >  1:2207564/1‑150 (MQ=255)
   aCTGACTACATGCCCGCGATTTTCGACCCAGAGATGGCGGGTTATCTCAAGGAATTCCGCGCGGGTATGCCAAGTTTTGCCTCGACTTTCAATGTTGCGGGGAGCTTTGAGTCGAATAAGGTAAGCGATTGGTATCGCAGCCCAGTCGAg                                                                                                                                                  <  2:96854/150‑1 (MQ=255)
    cTGACTACATGCCCGCGATTTTCGACCCAGAGATGGCGGGTTATCTCAAGGAATTCCGCGCGGGTATGCCAAGTTTTGCCTCGACTTTCAATGTTGCGGGGAGCTTTGAGTCGAATAAGGTAAGCGATTGGTATCGCAGCCCAGTCGAgc                                                                                                                                                 >  1:2007466/1‑150 (MQ=255)
       aCTACATGCCCGCGATTTTCGACCCAGAGATGGCGGGTTATCTCAAGGAATTCCGCGCGGGTATGCCAAGTTTTGCCTCGACTTTCAATGTTGCGGGGCGCTTTGAGTCGAATAAGGTAAGCGATTGGTATCGCAGCCCAGTCGAgctgg                                                                                                                                              >  1:787205/1‑150 (MQ=255)
       aCTACATGCCCGCGATTTTCGACCCAGAGATGGCGGGTTATCTCAAGGAATTCCGCGCGGGTATGCCAAGTTTTGCCTCGACTTTCAATGTTGCGGGGAGCTTTGAGTCGAATAAGGTAAGCGATTGGTATCGCAGCCCAGTCGAgctgg                                                                                                                                              >  1:223806/1‑150 (MQ=255)
         tACATGCCCGCGATTTTCGACCCAGAGATGGCGGGTTATCTCAAGGAATTCCGCGCGGGTATGCCAAGTTTTGATTCGACTTTCAAGGTTGCGGGGAGATTTGAGTCGAATAAGGTAAGCGCTTGGTATCGCAGCCCAGTCGAgctgggc                                                                                                                                            >  2:465183/1‑150 (MQ=255)
           cATGCCCGCGATTTTCGACCCAGAGATGGCGGGTTATCTCAAGGAATTCCGCGCGGGTATGCCAAGTTTTGCCTCGACTTTCAATGTTGCGGGGAGCTTTGAGTCGAATAAGGTAAGCGATTGGTATCGCAGCCCAGTCGAgctgggctg                                                                                                                                          >  1:1414841/1‑150 (MQ=255)
            aTGCCCGCGATTTTCGACCCAGAGATGGCGGGTTATCTCAAGGAATTCCGCGCGGGTATGCCAAGTTTTGCCTCGACTTTCAATGTTGCGGGGAGCTTTGAGTCGAATAAGGTAAGCGATTGGTATCGCAGCCCAGTCGAgctgggctgg                                                                                                                                         <  2:1314732/150‑1 (MQ=255)
            aTGCCCGCGATTTTCGACCCAGAGATGGCGGGTTATCTCAAGGAATTCCGCGCGGGTATGCCAAGTTTTGCCTCGACTTTCAATGTTGCGGGGAGCTTTGAGTCGAATAAGGTAAGCGATTGGTATCGCAGCCCAGTCGAgctgggctgg                                                                                                                                         <  2:1187278/150‑1 (MQ=255)
                      ttttCGACCCAGAGATGGCGGGTTATCTCAAGGAATTCCGCGCGGGTATGCCAAGTTTTGCCTCGACTTTCAATGTTGCGGGGAGCTTTGAGTCGAATAAGGTAAGCGATTGGTATCGCAGCCCAGTCGAGCTGGGCTGGGCCAAAACCa                                                                                                                               >  2:404657/1‑150 (MQ=255)
                      ttttCGACCCAGAGATGGCGGGTTATCTCAAGGAATTCCGCGCGGGTATGCCAAGTTTTGCCTCGACTTTCAATGTTGCGGGGAGCTTTGAGTCGAATAAGGTAAGCGATTGGTATCGCAGCCCAGTCGAGCTGGGCTGGGCCAAAACCa                                                                                                                               >  2:404667/1‑150 (MQ=255)
                       tttCGACCCAGAGATGGCGGGTTATCTCAAGGAATTCCGCGCGGGTATGCCAAGTTTTGCCTCGACTTTCAATGTTGCGGGGAGCTTTGAGTCGAATAAGGTAAGCGATTGGTATCGCAGCCCAGTCGAGCTGGGCTGGGCCAAAACCAt                                                                                                                              <  2:267285/150‑1 (MQ=255)
                        ttCGACCCAGAGATGGCGGGTTATCTCAAGGAATTCCGCGCGGGTATGCCAAGTTTTGCCTCGACTTTCAATGTTGCGGGGAGCTTTGAGTCGAATAAGGTAAGCGATTGGTATCGCAGCCCAGTCGAGCTGGGCTGGGCCAAAACCATc                                                                                                                             <  2:1515330/150‑1 (MQ=255)
                          cGACCCAGAGATGGCGGGTTATCTCAAGGAATTCCGCGCGGGTATGCCAAGTTTTGCCTCGACTTTCAATGTTGCGGGGAGCTTTGAGTCGAATAAGGTAAGCGATTGGTATCGCAGCCCAGTCGAGCTGGGCTGGGCCAAAACCATCaa                                                                                                                           <  2:2007466/150‑1 (MQ=255)
                             cccAGAGATGGCGGGTTATCTCAAGGAATTCCGCGCGGGTATGCCAAGTTTTGCCTCGACTTTCAATGTTGCGGGGAGCTTTGAGTCGAATAAGGTAAGCGATTGGTATCGCAGCCCAGTCGAGCTGGGCTGGGCCAAAACCATCAAGtt                                                                                                                        <  1:2366529/150‑1 (MQ=255)
                             cccAGAGATGGCGGGTTATCTCAAGGAATTCCGCGCGGGTATGCCAAGTTTTGCCTCGACTTTCAATGTTGCGGGGAGCTTTGAGTCGAATAAGGTAAGCGATTGGTATCGCAGCCCAGTCGAGCTGGGCTGGGCCAAAACCATCAACtt                                                                                                                        <  1:2403141/150‑1 (MQ=255)
                              ccAGAGATGGCGGGTTATCTCAAGGACTTCCGCGCGGGTATGCCAAGTTTTGCCTCGCCTTTCAATGTTGCGGGGAGCTTTGAGTAGAATAAGGTAAGCGATTGGTATCGCAGCCCAGTCGAGCTGGGCTGGGCCAAAACCATCAAGTTc                                                                                                                       >  2:260071/1‑150 (MQ=255)
                               cAGAGATGGCGGGTTATCTCAAGGAATTCCGCGCGGGTATGCCAAGTTTTGCCTCGACTTTCAATGTTGCGGGGAGCTTTGAGTCGAATAAGGTAAGCGATTGGTATCGCAGCCCAGTCGAGCTGGGCTGGGCCAAAACCATc                                                                                                                             <  1:159942/143‑1 (MQ=255)
                               cAGAGATGGCGGGTTATCTCAAGGAATTCCGCGCGGGTATGCCAAGTTTTGCCTCGACTTTCAATGTTGCGGGGAGCTTTGAGTCGAATAAGGTAAGCGATTGGTATCGCAGCCCAGTCGAGCTGGGCTGGGCCAAAACCATc                                                                                                                             >  2:159942/1‑143 (MQ=255)
                                 gagaTGGCAGGTTATCTCAAGGAATTCCGCGCGGGTATGCCAAGTTTTGCCTCGACTTTCAATGTTGCGGGGAGCTTTGAGTCGAATAAGGTAAGCGATTGGTATCGCAGCCCAGTCGAGCTGGGCTGGGCCAAAACCATCAAGTTCGAt                                                                                                                    <  1:880319/150‑1 (MQ=255)
                                        cGGGTTATCTCAAGGAATTCCGCGCGGGTATGCCAAGTTTTGCCTCGACTTTCAATGTTGCGGGGAGCTTTGAGTCGAATAAGGTAAGCGATTGGTATCGCGGCCCAGTCGAGCTGGGCTGGGCCaaaa                                                                                                                                  <  2:1705863/129‑1 (MQ=255)
                                        cGGGTTATCTCAAGGAATTCCGCGCGGGTATGCCAAGTTTTGCCTCGACTTTCAATGTTGCGGGGAGCTTTGAGTCGAATAAGGTAAGCGATTGGTATCGCGGCCCAGTCGAGCTGGGCTGGGCCaaaa                                                                                                                                  >  1:1705863/1‑129 (MQ=255)
                                           gTTATCTCAAGGAATTCCGCGCGGGTATGCCAAGTTTTGCCTCGACTTTCAATGTTGCGGGGAGCTTTGAGTCGAATAAGGTAAGCGATTGGTATCGCAGCCCAGTCGAGCTGGGCTGGGCCAAAACCATCAAGTTCGATCACGACTTTa                                                                                                          <  1:404657/150‑1 (MQ=255)
                                           gTTATCTCAAGGAATTCCGCGCGGGTATGCCAAGTTTTGCCTCGACTTTCAATGTTGCGGGGAGCTTTGAGTCGAATAAGGTAAGCGATTGGTATCGCAGCCCAGTCGAGCTGGGCTGGGCCAAAACCATCAAGTTCGATCACGACTTTa                                                                                                          <  1:404667/150‑1 (MQ=255)
                                             tATCTCAAGGAATTCCGCGCGGGTATGCCAAGTTTTGCCTCGACTTTCAATGTTGCGGGGAGCTTTGAGTCGAATAAGGTAAGCGATTGGTATCGCAGCCCAGTCGAGCTGGGCTGGGCCAAAACCATCAAGTTCGATCACGACTTTATc                                                                                                        <  2:2207564/150‑1 (MQ=255)
                                                 tcAAGGAATTCCGCGCGGGTATGCCAAGTTTTGCCTCGACTTTCAATGTTGCGGGGAGCTTTGAGTCGAATAAGGTAAGCGATTGGTATCGCAGCCCAGTCGAGCTGGGCTGGGCCAAAACCATCAAGTTCGATCACGACTTTATCg                                                                                                       >  2:585951/1‑147 (MQ=255)
                                                 tcAAGGAATTCCGCGCGGGTATGCCAAGTTTTGCCTCGACTTTCAATGTTGCGGGGAGCTTTGAGTCGAATAAGGTAAGCGATTGGTATCGCAGCCCAGTCGAGCTGGGCTGGGCCAAAACCATCAAGTTCGATCACGACTTTATCg                                                                                                       <  1:585951/147‑1 (MQ=255)
                                                   aaGGAATTCCGCGCGGGTATGCCAAGTTTTGCCTCGACTTTCAATGTTGCGGGGAGCTTTGAGTCGAATAAGGTAAGCGATTGGTATCGCAGCCCAGTCGAGCTGGGCTGGGCCAAAACCATCAAGTTCGATCACGACTTTATCGGTCGt                                                                                                  >  2:2003789/1‑150 (MQ=255)
                                                     ggAATTCCGCGCGGGTATGCCAAGTTTTGCCTCGACTTTCAATGTTGCGGGGAGCTTTGAGTCGAATAAGGTAAGCGATTGGTATCGCAGCCCAGTCGAGCTGGGCTGGGCCAAAACCATCAAg                                                                                                                          >  2:623737/1‑124 (MQ=255)
                                                     ggAATTCCGCGCGGGTATGCCAAGTTTTGCCTCGACTTTCAATGTTGCGGGGAGCTTTGAGTCGAATAAGGTAAGCGATTGGTATCGCAGCCCAGTCGAGCTGGGCTGGGCCAAAACCATCAAg                                                                                                                          <  1:623737/124‑1 (MQ=255)
                                                     ggAATTCCGCGCGGGTATGCCAAGTTTTGCCTCGACTTTCAATGTTGCGGGGAGCTTTGAGTCGAATAAGGTAAGCGATTGGTATCGCAGCCCAGTCGAGCTGGGCTGGGCCAAAACCATCAAGTTCGATCACGACt                                                                                                             >  2:1622055/1‑137 (MQ=255)
                                                     ggAATTCCGCGCGGGTATGCCAAGTTTTGCCTCGACTTTCAATGTTGCGGGGAGCTTTGAGTCGAATAAGGTAAGCGATTGGTATCGCAGCCCAGTCGAGCTGGGCTGGGCCAAAACCATCAAGTTCGATCACGACTTTATCGGTCGTGc                                                                                                <  1:1886540/150‑1 (MQ=255)
                                                     ggAATTCCGCGCGGGTATGCCAAGTTTTGCCTCGACTTTCAATGTTGCGGGGAGCTTCAAGTCGAATAAGGTAAGCGATTGGTATCGCAGCCCAGTCGAGCTGGGCTGGGCCAAAACCATCAAGTTCGATCACGACt                                                                                                             <  1:1622055/137‑1 (MQ=255)
                                                             gcgcgGGTATGCCAAGTTTTGCCTCGACTTTCAATGTTGCGGGGAGCTTTGAGTCGAATAAGGTAAGCGATTGGTATCGCAGCCCAGTCGAGCTGGGCTGGGCCAAAACCATCAAGTTCGATCACGACTTTATTGGTCGTGGCGCGGTgg                                                                                        >  2:1722621/1‑150 (MQ=255)
                                                              cgcgGGTATGCCAAGTTTTGCCTCGACTTTCAATGTTGCGGGGAGCTTTGAGTCGAATAAGGTAAGCGATTGGTATCGCAGCCCAGTCGAGCTGGGCTGGGCCAAAACCATCAAGTTCGATCACGACTTTATCGGTCGTGCCGCGTTGGa                                                                                       >  2:855507/1‑150 (MQ=255)
                                                                     aTGCCAAGTTTTGCCTCGACTTTCAATGTTGCGGGGAGCTTTGAGTCGAATAAGGTAAGCGATTGGTATCGCAGCCCAGTCGAGCTGGGCTGGGCCAAAACCATCAAGTTCGATCACGACTTTATCGGTCGTGCCGCGTTGGAAAAagag                                                                                <  1:1137246/150‑1 (MQ=255)
                                                                        ccAAGTTTTGCCTCGACTTTCAATGTTGCGGGGAGCTTTGAGTCGAATAAGGTAAGCGATTGGTATCGCAGCCCAGTCGAGCTGGGCTGGGcc                                                                                                                                      <  1:219848/93‑1 (MQ=255)
                                                                        ccAAGTTTTGCCTCGACTTTCAATGTTGCGGGGAGCTTTGAGTCGAATAAGGTAAGCGATTGGTATCGCAGCCCAGTCGAGCTGGGCTGGGcc                                                                                                                                      >  2:219848/1‑93 (MQ=255)
                                                                        ccAAGTTTTGCCTCGACTTTCAATGTTGCGGGGAGCTTTGAGTCGAATAAGGTAAGCGATTGGTATCGCAGCCCAGTCGAGCTGGGCTGGGCCAAAACCATCAAGTTCGATCACGACTTTAt                                                                                                         <  1:616196/122‑1 (MQ=255)
                                                                        ccAAGTTTTGCCTCGACTTTCAATGTTGCGGGGAGCTTTGAGTCGAATAAGGTAAGCGATTGGTATCGCAGCCCAGTCGAGCTGGGCTGGGCCAAAACCATCAAGTTCGATCACGACTTTAt                                                                                                         >  2:616196/1‑122 (MQ=255)
                                                                             ttttGCCTCGACTTTCTATTTTGCGGGGAGCTTTGAGTCGAATAAGGTAAGCGATTGGTATCGCAGCCCAGTCGAGCTGGGCTGGGCCAAAACCATCAAGTTCGATCACGACTTTATCGGTCGTGCCGCGTTGGAAAAAGAGGTTGCaga                                                                        <  2:514164/150‑1 (MQ=255)
                                                                                 gCCTCGACTTTCAATGTTGCGGGGAGCTTTGAGTCGAATAAGGTAAGCGATTGGTATCGCAGCCCAGTCGAGCTGGGCTGGGCCAAAACCATCAAGTTCGATCACGACTTTATCGGTCGTGCCGCGTTGGAAAAAGAGGTTGCAGAGCCt                                                                    <  1:1948012/150‑1 (MQ=255)
                                                                                 gCCTCGACTCTTAATGTTGCGGGGAGCTTTGAGTCGAATAAGGTAAGCGATTGGTATCGCAGCCCAGTCGAGCTGGGCTGGGCCAAAACCATCAAGTTCGATCACGACTTTATCGGTCGTGCCGCGTTGGAAAAAGAGGTTGCAGAGCCt                                                                    <  2:787205/150‑1 (MQ=255)
                                                                                    tCGACTTTCAATGTTGCGGGGAGCTTTGAGTCGAATAAGGTAAGCGATTGGTATCGCAGCCCAGTCGAGCTGGGCTGGGCCAAAACCATCAAGTTCGATCACGACTTTATCGGTCGTGCCGCGTTGGAAAAAGAGGTTGCAGAGCCTCGa                                                                 >  1:2261187/1‑150 (MQ=255)
                                                                                    tCGACTTTCAATGTTGCGGGGAGCTTTGAGTCGAATAAGGTAAGCGATTGGTATCGCAGCCCAGTCGAGCTGGGCTGGGCCAAAACCATCAAGTTCGATCACGACTTTATCGGTCGTGCCGCGTTGGAAAAAGAGGTTGCAGAGCCTCGa                                                                 >  2:103361/1‑150 (MQ=255)
                                                                                     cGACTTTCAATGTTGCGGGGAGCTTTGAGTCGAATAAGGTAAGCGATTGGTATCGCAGCCCAGTCGAGCTGGGCTGGGCCAAAACCATCAAGTTCGATCACGACTTTATCGGTCGTGCCGCGTTGGAAAAAGAGGTTGCAGAGCCTCGAc                                                                <  1:1479954/150‑1 (MQ=255)
                                                                                       aCTTTCAATGTTGCGGGGAGCTTTGAGTCGAATAAGGTAAGCGATTGGTATCGCAGCCCAGTCGAGCTGGGCTGGGCCAAAACCATCAAGTTCGATCACGACTTTATCGGTCGTGCCGCGTTGGAAAAAGAGGTTGCAGAGCCTCGACgg                                                              <  1:855507/150‑1 (MQ=255)
                                                                                        cTTTCAATGTTGCGGGGAGCTTTGAGTCGAATAAGGTAAGCGATTGGTATCGCAGCCCAGTCGAGCTGGGCTGGGCCAAAACCATCAAGTTCGATCACGACTTTATCGGTCGTGCCGCGTTGGAAAAAGAGGTTGCAGAGCCTCGACggg                                                             <  1:2080916/150‑1 (MQ=255)
                                                                                         tttCAATGTTGCGGGGAGCTTTGAGTCGAATAAGGTAAGCGATTGGTATCGCAGCCCAGTCGAGCTGGGCTGGGCCAAAACCATCAAGTTCGAt                                                                                                                    >  2:847018/1‑94 (MQ=255)
                                                                                         tttCAATGTTGCGGGGAGCTTTGAGTCGAATAAGGTAAGCGATTGGTATCGCAGCCCAGTCGAGCTGGGCTGGGCCAAAACCATCAAGTTCGAt                                                                                                                    <  1:847018/94‑1 (MQ=255)
                                                                                             aaTGTTGCGGGGAGCTTTGAGTCGAATAAGGTAAGCGATTGGTATCGCAGCCCAGTCGAGCTGGGCTGGGCCAAAACCATCAAGTTCGATCACGACTTTATCGGTCGTGCCGCGTTGGAAAAAGAGGTTGCAGAGCCTCGACGGGTGATg                                                        >  2:821122/1‑150 (MQ=255)
                                                                                              aTGTTGCGGGGAGCTTTGAGTCGAATAAGGTAAGCGATTGGTATCGCAGCCCAGTCGAGCTGGGCTGGGCCAAAACCATCAAGTTCGATCACGACTTTATCGGTCGTGCCGCGTTGGAAAAAGAGGTTGCAGAGCCTCGACGGGTGATgc                                                       <  2:223806/150‑1 (MQ=255)
                                                                                                 ttGCGGGGAGCTTTGAGTCGAATAAGGTAAGCGATTGGTATCGCAGCCCAGTCGAGCTGGGCTGGGCCAAAACCATCAAGTTCGATCACGACTTTATCGGTCGTGCCGCGTTGGAAAAAGAGGtt                                                                             <  2:2348573/125‑1 (MQ=255)
                                                                                                      gggAGCTTTGAGTCGAATAAGGTAAGCGATTGGTATCGCAGCCCAGTCGAGCTGGGCTGGGCCAAAACCATCAAGTTCGATCACGACTTTATCGGTCGTGCCGCGTTGGAAAAAGAGGTTGCAGAGCCTCGACGGGTGATGCGCACCTTg                                               <  2:1473133/150‑1 (MQ=255)
                                                                                                       ggAGCTTTGAGTCGAATAAGGTAAGCGATTGGTATCGCAGCCCAGTCGAGCTGGGCTGGGCCAAAACCATCAAGt                                                                                                                         <  2:309433/75‑1 (MQ=255)
                                                                                                       ggAGCTTTGAGTCGAATAAGGTAAGCGATTGGTATCGCAGCCCAGTCGAGCTGGGCTGGGCCAAAACCATCAAGt                                                                                                                         >  1:309433/1‑75 (MQ=255)
                                                                                                           cTTTGCGTCGCATACGGTAAGCGATTGGTATCGCAGCCCAGTCGAGCTGGGCTGGGCCAAAACCATCAAGTTCGATCACGACTTTATCGGTCGTGCCGCGTTGGAAAAAGAGGTTGCAGAGCCTCGACGGGTGATGCGCACCTTGGTTTg                                          >  2:2154019/1‑150 (MQ=255)
                                                                                                           cTTTGAGTCGAATAAGGTAAGCGATTGGTATCGCAGCCCAGTCGAGCTGGGCTGGGCCAAAACCATCAAGTTCGATCACGACTTTATCGGTCGTGCCGCGTTGGAAAAAGAGGTTGCAGAGCCTCGACGGGTGATGCGCACCTTGGTTTg                                          <  2:2261187/150‑1 (MQ=255)
                                                                                                              tGAGTCGAATAAGGTAAGCGATTGGTATCGCAGCCCAGTCGAGCTGGGCTGGGCCAAAACCATCAAGTTCGATCACGACTTTATCGGTCGTGCCGCGTTGGAAAAAGAGGTTGCAGAGCCTCGACGGGTGATGCGCACCTTGGTTTGGaa                                       <  1:2185092/150‑1 (MQ=255)
                                                                                                                  tCGAATAAGGTAAGCGATTGGTATCGCAGCCCAGTCGAGCTGGGTTGGGCCAAAACCATCAAGTTCTATCACCACTTTATCGGTCGTGCCGCGTTGGAAAAATAGGTTGCAGAGCCTCGACGGGTGATGCGCACCTTGGTTTGGAATGGt                                   <  1:465183/150‑1 (MQ=255)
                                                                                                                  tCGAATAAGGTAAGCGATTGGTATCGCAGCCCAGTCGAGCTGGGCTGGGCCAAAACCATCAAGTTCGATCACGACTTTATCGGTCGTGCCGCGTTGGAAAAAGAGGTTGCAGAGCCTCGACgg                                                              >  1:216341/1‑123 (MQ=255)
                                                                                                                  tCGAATAAGGTAAGCGATTGGTATCGCAGCCCAGTCGAGCTGGGCTGGGCCAAAACCATCAAGTTCGATCACGACTTTATCGGTCGTGCCGCGTTGGAAAAAGAGGTTGCAGAGCCTCGACGGGTGATGCGCACCTTGGTTTGGAATGGt                                   >  2:1262771/1‑150 (MQ=255)
                                                                                                                   cGAATAAGGTAAGCCATTGGTATCGCAGCCCAGTCGAGCTGGGCTGGGCCAAAACCATCAAGTTCGATCACGACTTTATCGGTCGTGCCGCGTTGGAAAAAGAGGTTGCAGAGCCTCGACGGGTGATGCGCACCTTGGTTTGGAATGGtg                                  <  1:415347/150‑1 (MQ=255)
                                                                                                                     aaTAAGGTAAGCGATTGGTATCGCAGCCCAGTCGAGCTGGGCTGGGCCAAAACCATCAAGTTCGATCACGACTTTATCGGTCGTGCCGCGTTGGAAAAAGAGGTTGCAGAGCCTCGACGGGTGATGCGCACCTTGGTTTGGAATGGtgat                                <  1:260071/150‑1 (MQ=255)
                                                                                                                       tAAGGTAAGCGATTGGTATCGCAGCCCAGTCGAGCTGGGCTGGGCCAAAACCATCAAGTTCGATCACGACTTTATCGGTCGTGCCGCGTTGGAAAAAGAGGTTGCAGAGCCTCGACGGGTGATGCGCACCTTGGTTTGGAATGGtgatga                              >  1:253057/1‑150 (MQ=255)
                                                                                                                            tAAGCGATTGGTATCGCAGCCCAGTCGAGCTGGGCTGGGCCAAAACCATCAAGTTCGATCACGACTTTATCGGTCGTGCCGCGTTGGAAAAAGAGGTTGCAGAGCCTCGACGGGTGATGCGCACCTTGGTTTGGAATGGTGATGACGTTg                         >  1:1671591/1‑150 (MQ=255)
                                                                                                                              aGCGATTGGTATCGCAGCCCAGTCGAGCTGGGCTGGGCCAAAACCATCAAGTTCGATCACGACTTTATCGGTCGTGCCGCGTTGGAAAAAGAGGTTGCAGAGCCTCGACGGGTGATGCGCACCTTGGTTTGGAATGGTGATGACGTTGCa                       <  1:976878/150‑1 (MQ=255)
                                                                                                                               gCGATTGGTATCGCAGCCCAGTCGAGCTGGGCTGGGCCAAAACCATCAAGTTCGATCACGACTTTATCGGTCGTGCCGCGTTGGAAAAAGAGGTTGCAGAGCCTCGACGGGTGATGCGCACCTTGGTTTGGAATGGTGATGACGTTGCAg                      <  2:1919605/150‑1 (MQ=255)
                                                                                                                                  aTTGGTATCGCAGCCCAGTCGAGCTGGGCTGGGCCAAAACCATCAAGTTCGATCACGACTTTATCGGTCGTGCCGCGTTGGAAAAagag                                                                                >  1:922189/1‑89 (MQ=255)
                                                                                                                                  aTTGGTATCGCAGCCCAGTCGAGCTGGGCTGGGCCAAAACCATCAAGTTCGATCACGACTTTATCGGTCGTGCCGCGTTGGAAAAagag                                                                                <  2:922189/89‑1 (MQ=255)
                                                                                                                                  aTTGGTATCGCAGCCCAGTCGAGCTGGGCTGGGCCAAAACCATCAAGTTCGATCACGACTTTATCGGTCGTGCCGCGTTGGAAAAAGAGGTTGCAGAGCCTCGACGGGTGATGCGCACCTTGGTTTGGaa                                       >  2:1525521/1‑130 (MQ=255)
                                                                                                                                  aTTGGTATCGCAGCCCAGTCGAGCTGGGCTGGGCCAAAACCATCAAGTTCGATCACGACTTTATCGGTCGTGCCGCGTTGGAAAAAGAGGTTGCAGAGCCTCGACGGGTGATGCGCACCTTGGTTTGGaa                                       <  1:1525521/130‑1 (MQ=255)
                                                                                                                                      gTATCGCAGCCCAGTCGAGCTGGGCTGGGCCAAAACCATCAAGTTCGATCACGACTTTATCGGTCGTGCCGCGTTGGAAAAAGAGGTTGCAGAGCCTCGACGGGt                                                            >  1:708412/1‑105 (MQ=255)
                                                                                                                                      gTATCGCAGCCCAGTCGAGCTGGGCTGGGCCAAAACCATCAAGTTCGATCACGACTTTATCGGTCGTGCCGCGTTGGAAAAAGAGGTTGCAGAGCCTCGACGGGt                                                            <  2:708412/105‑1 (MQ=255)
                                                                                                                                      gTATCGCAGCCCAGTCGAGCTGGGCTGGGCCAAAACCATCAAGTTCGATCACGACTTTATCGGTCGTGCCGCGTTGGAAAAAGAGGTTGCAGAGCCTCGACGGGTGATGCGCACCTTGGTTTGGAATGGTGCTGACGTTGCAGATGTTCa               >  2:917558/1‑150 (MQ=255)
                                                                                                                                      gTATCGCAGCCCAGTCGAGCTGGGCTGGGCCAAAACCATCAAGTTCGATCACGACTTTATCGGTCGTGCCGCGTTGGAAAAAGAGGTTGCAGAGCCTCGACGGGTGATGCGCACCTTGGTTTGGAATGGTGATGACGTTGCAGATGTTCa               <  1:1391747/150‑1 (MQ=255)
                                                                                                                                         tCGCAGCCCAGTCGAGCTGGGCTGGGCCAAAACCATCAAGTTCGATCACGACTTTATCGGTCGTGCCGCGTTGGAAAAAGAGGTTGCAGAGCCTCGACGGGTGATGCGCACCTTGGTTTGGAATGGTGATGACGTTGCAGAt                    >  2:2018565/1‑142 (MQ=255)
                                                                                                                                         tCGCAGCCCAGTCGAGCTGGGCTGGGCCAAAACCATCAAGTTCGATCACGACTTTATCGGTCGTGCCGCGTTGGAAAAAGAGGTTGCAGAGCCTCGACGGGTGATGCGCACCTTGGTTTGGAATGGTGATGACGTTGCAGAt                    <  1:2018565/142‑1 (MQ=255)
                                                                                                                                         tCGCAGCCCAGTCGAGCTGGGCTGGGCCAAAACCATCAAGTTCGATCACGACTTTATCGGTCGTGCCGCGTTGGAAAAAGAGGTTGCAGAGCCTCGACGGGTGATGCGCACCTTGGTTTGGAATGGTGATGACGTTGCAGATGTTCATGc            <  1:2154019/150‑1 (MQ=255)
                                                                                                                                         gcccAGCCCAGCTCGACTGGGCTGCGCCAAAACCATCAAGTTCGATCACGACTTTATCGGTCGTGCCGCGTTGGAAAAAGAGGTTGCAGAGCCTCGACGGGTGATGCGCACCTTGGTTTGGAATGGTGATGACGTTGCAGATGTTCAt              >  2:9000/4‑148 (MQ=255)
                                                                                                                                         gcccAGCCCAGCTCGACTGGGCTGCGCCAAAACCATCAAGTTCGATCACGACTTTATCGGTCGTGCCGCGTTGGAAAAAGAGGTTGCAGAGCCTCGACGGGTGATGCGCACCTTGGTTTGGAATGGTGATGACGTTGCAGATGTTCAt              <  1:9000/145‑1 (MQ=255)
                                                                                                                                           gCAGCCCAGTCGAGCTGGGCTGGGCCAAAACCATCAAGTTCGATCACGACTTTATCGGTc                                                                                                    >  1:1170670/1‑60 (MQ=255)
                                                                                                                                           gCAGCCCAGTCGAGCTGGGCTGGGCCAAAACCATCAAGTTCGATCACGACTTTATCGGTc                                                                                                    <  2:1170670/60‑1 (MQ=255)
                                                                                                                                           ccAGCCCAGCTCGACTGGGCTGGGCCAAAACCATCAAGTTCGATCACGACTTTATCGGTCGTGCCGCGTTGGAAAAAGAGGTTGCAGAGCCTCGACGGGTGATGCGCACCTTGGTTTGGAAt                                      >  1:1561041/2‑122 (MQ=255)
                                                                                                                                           ccAGCCCAGCTCGACTGGGCTGGGCCAAAACCATCAAGTTCGATCACGACTTTATCGGTCGTGCCGCGTTGGAAAAAGAGGTTGCAGAGCCTCGACGGGTGATGCGCACCTTGGTTTGGAAt                                      <  2:1561041/121‑1 (MQ=255)
                                                                                                                                           ccAGCCCAGCTCGACTGGGCTGGGCCAAAACCATCAAGTTCGATCACGACTTTATCGGTCGTGCCGCGTTGGAAAAAGAGGTTGCAGAGCCTCGACGGGTGATGCGCACCTTGGTTTGGAATGGTGATGACGTTGCAGATGTTCa               >  2:623881/2‑145 (MQ=255)
                                                                                                                                           ccAGCCCAGCTCGACTGGGCTGGGCCAAAACCATCAAGTTCGATCACGACTTTATCGGTCGTGCCGCGTTGGAAAAAGAGGTTGCAGAGCCTCGACGGGTGATGCGCACCTTGGTTTGGAATGGTGATGACGTTGCAGATGTTCAt              <  1:554780/145‑1 (MQ=255)
                                                                                                                                            cAGCCCAGCTCGACTGGGCTGGGCCAAAACCATCAAGtt                                                                                                                        >  2:321769/1‑39 (MQ=17)
                                                                                                                                            cAGCCCAGCTCGACTGGGCTGGGCCAAAACCATCAAGtt                                                                                                                        <  1:321769/39‑1 (MQ=17)
                                                                                                                                            cAGCCCAGCTCGACTGGGCTGCGCCAAAACCATCAAGTTCGATCACGACTTTATCGGTCGTGCCGCGTTGGAAAAAGAGGTTGCAGAGCCTCGACGGGTGATGCGCACCTTGGTTTGGAATGGTGATGACGTTGCAGATGTTCATGCCTc         <  2:784987/150‑1 (MQ=255)
                                                                                                                                            cAGCCCAGTCGAGCTGGGCTGGGCCAAAACCATCAAGTTCGATCACGACTTTATCGGTCGTGCCGCGTTGGAAAAAGAGGTTGCAGAGCCTCGACGGGTGATGCGCACCTTGGTTTGGAATGGTGATGACGTTGCAGATGTTCATGCCTc         <  1:2003789/150‑1 (MQ=255)
                                                                                                                                              gCCCAGTCGAGCTGGGCTGGGCCAAAACCATCAAGTTCGATCACGACTTTATCGGTCGTGCCGCGTTGGAAAAAGAGGTTGCAGAGCCTCGACGGGTGATGCGCACCTTGGTTTGGAATGGTGATGACGTTGCAGATGTTCATGCCTCGc       <  1:1722621/150‑1 (MQ=255)
                                                                                                                                               cccAGTCGAGCTGGGCTGGGCCAAAACCATCAAGTTCGATCACGACTTTATCGGTCGTGCCGCGTTGGAAAAAGAGGTTGCAGAGCCTCGACGGGTGATGCGCACCTTGGTTTGGAATg                                     >  2:2237694/1‑119 (MQ=255)
                                                                                                                                               cccAGTCGAGCTGGGCTGGGCCAAAACCATCAAGTTCGATCACGACTTTATCGGTCGTGCCGCGTTGGAAAAAGAGGTTGCAGAGCCTCGACGGGTGATGCGCACCTTGGTTTGGAATg                                     <  1:2237694/119‑1 (MQ=255)
                                                                                                                                               cccAGTCGAGCTGGGCTGGGCCAAAACCATCAAGTTCGATCACGACTTTATCGGTCGTGCCGCGTTGGAAAAAGAGGTTGCAGAGCCTCGACGGGTGATGCGCACCTTGGTTTGGAATGGTGATGACGTTGCAGATGTTCATGCCTCGCt      >  1:1788860/1‑150 (MQ=255)
                                                                                                                                               cccAGTCGAGCTGGGCTGGGCCAAAACCATCAAGTTCGATCACGACTTTATCGGTCGTGCCGCGTTGGAAAAAGAGGTTGCAGAGCCTCGACGGGTGATGCGCACCTTGGTTTGGAATGGTGATGACGTTGCAGATGTTCATGCCTCGCt      <  1:1262771/150‑1 (MQ=255)
                                                                                                                                                  aGTCGAGCTGGGCTGGGCCAAAACCATCAAGTTCGATCACGACTTTATCGGTCGTGCCGCGTTGGAAAAAGAGGTTGCAGAGCCTCGACGGGTGATGCGCACCTTGGTTTGGAATGGTGATGACGTTGCAGATGTTCATGCCt          <  1:2114259/143‑1 (MQ=255)
                                                                                                                                                  aGTCGAGCTGGGCTGGGCCAAAACCATCAAGTTCGATCACGACTTTATCGGTCGTGCCGCGTTGGAAAAAGAGGTTGCAGAGCCTCGACGGGTGATGCGCACCTTGGTTTGGAATGGTGATGACGTTGCAGATGTTCATGCCt          >  2:2114259/1‑143 (MQ=255)
                                                                                                                                                   gTCGAGCTGGGCTGGGCCAAAACCATCAAGTTCGATCACGACTTTATCGGTCGTGCCGCGTTGGAAAAAGAGGTTGCAGAGCCTCGACGGGTGATGCGCACCTTGGTTTGGAATGGTGCTGACGTTGCAGATGTTCATGCCTCGCTGTTc  <  1:917558/150‑1 (MQ=255)
                                                                                                                                                    |                                                                                                                                                     
GTTACTGACTACATGCCCGCGATTTTCGACCCAGAGATGGCGGGTTATCTCAAGGAATTCCGCGCGGGTATGCCAAGTTTTGCCTCGACTTTCAATGTTGCGGGGAGCTTTGAGTCGAATAAGGTAAGCGATTGGTATCGCAGCCCAGTCGAGCTGGGCTGGGCCAAAACCATCAAGTTCGATCACGACTTTATCGGTCGTGCCGCGTTGGAAAAAGAGGTTGCAGAGCCTCGACGGGTGATGCGCACCTTGGTTTGGAATGGTGATGACGTTGCAGATGTTCATGCCTCGCTGTTC  >  NC_002947/2199859‑2200155

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: