New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 31371	80 (0.900)	9 (0.110)	9/224	NT	10.3%	intergenic (+35/‑33)	PP_0026/PP_0027	cobalt/cadmium/zinc exporter/membrane protein
	?	NC_002947	= 31377	84 (1.040)					intergenic (+41/‑27)	PP_0026/PP_0027	cobalt/cadmium/zinc exporter/membrane protein

AGATGGGGATGCTGTGTTGGCGGCCGTCGTGGATGCTGTCAGCGATGCATTCGAAATCCATCACTGCACCATCCAGATCGAGCGGGCAGCTTTCCACGAGAGCGTTCCCTCACCCTCGCACTGACCGATCGGTAAACACCATGCAAACACATCACCCT‑C‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/31213‑31371 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acatcaccct‑cAGCCAGGAGGGTGATGTGTTTGCATGGTGTTTACCGATCGGTCAGTGCGAGGGTGAGGGAACGCTCTCGTGGAAAGCTGCCCGCTCGATCTGGATGGTGCAGTGATGGATTTCGAATGCATCGCTGACAGCATCCACGACGG  <  NC_002947/31377‑31236                                                                                                                                                                                                                                                                                                                AGATGGGGATGCTGTGTTGGCGGCCGGCGTGGATGCTGTCAGCGATGCATTCGAAATCCATCACTGCACCATCCAGATCGAGCGGGAAGCTTTCCACGAGAGCGTTCCATCACCCTCGCACTGACCGATCGGTAAACACCATGCAAACAC                                                                                                                                                          <  1:752834/150‑1     GGGGATGCTGTGTTGGCGGCCGTCGTGGATGCTGTCAGCGATGCATTCGAAATCCATCACTGCACCATCCAGATCGAGCGGGCAGCTTTCCACGAGAGCGTTCCCTCACCCTCGCACTGACCGATCGGTAAACACCATGCAAACACATCA                                                                                                                                                      <  2:354972/150‑1       GGATGCTGTGTTGGCGGCCGTCGTGGATGCTGTCAGCGATGCATTCGAAATCCATCACTGCACCATCCAGATCGAGCGGGCAGCTTTCCACGAGAGCGTTCCCTCACCCTCGCACTGACCGATCGGTAAACACCATGCAAACACATCA                                                                                                                                                      <  2:942392/148‑1       GGATGCTGTGTTGGCGGCCGTCGTGGATGCTGTCAGCGATGCATTCGAAATCCATCACTGCACCATCCAGATCGAGCGGGCAGCTTTCCACGAGAGCGTTCCCTCACCCTCGCACTGACCGATCGGTAAACACCATGCAAACACATCA                                                                                                                                                      >  1:942392/1‑148                      GGCCGTCGTGGATGCTGTCAGCGATGCATTCGAAATCCATCACTGCACCATCCAGATCGAGCGGGCAGCTTTCCACGAGAGCGTTCCCTCACCCTCGCACTGACCGATCGGTAAACACCATGCAAACACATCACCCT                                                                                                                                                  <  1:2103016/137‑1                      GGCCGTCGTGGATGCTGTCAGCGATGCATTCGAAATCCATCACTGCACCATCCAGATCGAGCGGGCAGCTTTCCACGAGAGCGTTCCCTCACCCTCGCACTGACCGATCGGTAAACACCATGCAAACACATCACCCT                                                                                                                                                  >  2:2103016/1‑137                          GTCGTGGATGCTGTCAGCGATGCATTCGAAATCCATCACTGCACCATCCAGATCGAGCGGGCAGCTTTCCACGAGAGCGTTCCCTCACCCTCGCACTGACCGATCGGTAAACACCATGCAAACACATCACCCT‑CAGCCAGGAGGGTGATG                                                                                                                                <  1:589446/150‑1                                  TGCTGTCAGCGATGCATTCGAAATCCATCACTGCACCATCCAGATCGAGCGGGCAGCTTTCCACGAGAGCGTTCCCTCACCCTCGCACTGACCGATCGGTAAACACCATGCAAACACATCACCCT‑CAGCCAGGAGGGTG                                                                                                                                   <  1:2277899/139‑1                                  TGCTGTCAGCGATGCATTCGAAATCCATCACTGCACCATCCAGATCGAGCGGGCAGCTTTCCACGAGAGCGTTCCCTCACCCTCGCACTGACCGATCGGTAAACACCATGCAAACACATCACCCT‑CAGCCAGGAGGGTG                                                                                                                                   >  2:2277899/1‑139                                                 ATTCGAAATCCATCACTGCACCATCCAGATCGAGCGGGCATCTTTCCACGAGAGCGTTCCCTCACCCTCGCACTGACCGATCGGTAAACACCATGCAAACACATCACCCT‑CAGCCAGGAGGGTGA                                                                                                                                  >  1:1516441/1‑125                                                 ATTCGAAATCCATCACTGCACCATCCAGATCGAGCGGGCATCTTTCCACGAGAGCGTTCCCTCACCCTCGCACTGACCGATCGGTAAACACCATGCAAACACATCACCCT‑CAGCCAGGAGGGTGA                                                                                                                                  <  2:1516441/125‑1                                                                                                                                    GTAAACACCATGCAAACACATCACCCTCCTGGC‑TGAGGGTGATGTGTTTGCATGGTGTTTACCGATCGGTCAGTGCGAGGGTGAGGGAACGCTCTCGTGGAAAGCTGCCCGCTCGATCTGGAT                                                 >  2:2021985/1‑123                                                                                                                                    GTAAACACCATGCAAACACATCACCCT‑CCTGGCTGAGGGTGATGTGTTTGCATGGTGTTTACCGATCGGTCAGTGCGAGGGTGAGGGAACGCTCTCGTGGAAAGCTGCCCGCTCGATCTGGAT                                                 <  1:2021985/123‑1                                                                                                                                     TAAACACCATGCAAACACATCACCCTCCTGGC‑TGAGGGTGATGTGTTTGCATGGTGTTTACCGATCGGTCAGTGCGAGGGTGAGGGAACGCTCTCGTGGAAAGCTGCCCGCTCGATCTGGATGGTGCAGTGATGGA                                   <  1:1198943/136‑1                                                                                                                                     TAAACACCATGCAAACACATCACCCT‑CCTGGCTGAGGGTGATGTGTTTGCATGGTGTTTACCGATCGGTCAGTGCGAGGGTGAGGGAACGCTCTCGTGGAAAGCTGCCCGCTCGATCTGGATGGTGCAGTGATGGA                                   >  2:1198943/1‑136                                                                                                                                                     ACATCACCCT‑CAGCCAGGAGGGTGATGTGTTTGCATGGTGTTTACCGATCGGTCAGTGCGAGGGTGAGGGAACGCTCTCGT                                                                          <  1:292/81‑1                                                                                                                                                     ACATCACCCT‑CAGCCAGGAGGGTGATGTGTTTGCATGGTGTTTACCGATCGGTCAGTGCGAGGGTGAGGGAACGCTCTCGT                                                                          >  2:292/1‑81                                                                                                                                                      CATCACCCT‑CAGCCAGGAGGGTGATGTGTTTGCATGGTGTTTACCGATCGGTCAGTGCGAGGGTGAGGGAACGCTCTCGTGGAAAGCTGCCCGCTCGATCTGGATGTTGCAGTGATGGATTTCGAA                            <  1:1033773/126‑1                                                                                                                                                      CATCACCCT‑CAGCCAGGAGGGTGATGTGTTTGCATGGTGTTTACCGATCGGTCAGTGCGAGGGTGAGGGAACGCTCTCGTGGAAAGCTGCCCGCTCGATCTGGATGGTGCAGTGATGGATTTCGAATGCATCGCTGACAGCATCCACGAC    >  2:2024078/1‑150                                                                                                                                                      CATCACCCT‑CAGCCAGGAGGGTGATGTGTTTGCATGGTGTTTACCGATCGGTCAGTGCGAGGGTGAGGGAACGCTCTCGTGGAAAGCTGCCCGCTCGATCTGGATGGTGCAGTGATGGATTTCGAA                            >  2:1033773/1‑126                                                                                                                                                       ATCACCCT‑CAGCCAGGAGGGTGATGTGTTTGCATGGTGTTTACCGATCGGTCAGTGCGAGGGTGAGGGAACGCTCTCGTGGAAAGCTGCCCGCTCGATCTGGATGGTGCAGTGATGGATTTCGAATGCATCGCTGACAGCATCCACGACG   >  2:1708551/1‑150                                                                                                                                                       ATCACCCT‑CAGCCAGGAGGGTGATGTGTTTGCATGGTGTTTACCGATCGGTCAGTGCGAGGGTGAGGGAACGCTCTCGTGGAAAGCTGCCCGCTCGATCTGGATGGTGCAGTGATGGATTTCGAATGCATCGCTGACAGCATCCACGACG   >  2:2148367/1‑150                                                                                                                                                       ATCACCCT‑CAGCCAGGAGGGTGATGTGTTTGCATGGTGTTTACCGATCGGTCAGTGCGAGGGTGAGGGAACGCTCTCGTGGAAAGCTGCCCGCTCGATCT                                                     >  1:451913/1‑100                                                                                                                                                       ATCACCCT‑CAGCCAGGAGGGTGATGTGTTTGCATGGTGTTTACCGATCGGTCAGTGCGAGGGTGAGGGAACGCTCTCGTGGAAAGCTGCCCGCTCGATCT                                                     <  2:451913/100‑1                                                                                                                                                       ATCACCCT‑CAGCCAGGAGGGTGATGTGTTTGCATGATGTTTACCGATCGGTCAGTGCGAGGGTGAGGGAACGCTCTCGTGGAAAGCTGCCCGCTCGATCTGGATGGTGCAGTGATGGATTTCGAATGCATCGCTGACAGCATCCACGACG   >  1:323414/1‑150                                                                                                                                                        TCACCCT‑CAGCCAGGAGGGTGATGTGTTTGCATGGTGTTTACCGATCGGTCAGTGCGAGGGTGAGGGAACGCTCTCGTGGAAAGCTGCCCGCTCGATCTGGATGGTGCAGTGATGGATTTCGAATGCATCGCTGACAGCATCCACGACGG  <  2:1213240/150‑1                                                                                                                                                          ACCCT‑CAGCCAGGAGGGTGATGTGTTTGCATGGTGTTTACCGATCGGTCAGTGCGAGGGTGAGGGAACGCTCTCGTGGAAAGCTGCCCGCTCGATCTGGAT                                                 >  2:1553820/1‑101                                                                                                                                                          ACCCT‑CAGCCAGGAGGGTGATGTGTTTGCATGGTGTTTACCGATCGGTCAGTGCGAGGGTGAGGGAACGCTCTCGTGGAAAGCTGCCCGCTCGATCTGGAT                                                 <  1:1553820/101‑1                                                                                                                                                            CCT‑CAGCCAGGAGGGTGATGTGTTTGCATGGTGTTTACCGATCGGTCAGTGCGAGGGTGAGGGAACGCTCTCGTGGAAAGCTGCCCGCTCGATCTGGATGGTGCAGT                                         >  1:499928/1‑107                                                                                                                                                            CCT‑CAGCCAGGAGGGTGATGTGTTTGCATGGTGTTTACCGATCGGTCAGTGCGAGGGTGAGGGAACGCTCTCGTGGAAAGCTGCCCGCTCGATCTGGATGGTGCAGT                                         <  2:499928/107‑1                                                                                                                                                                                                                                                                                                                AGATGGGGATGCTGTGTTGGCGGCCGTCGTGGATGCTGTCAGCGATGCATTCGAAATCCATCACTGCACCATCCAGATCGAGCGGGCAGCTTTCCACGAGAGCGTTCCCTCACCCTCGCACTGACCGATCGGTAAACACCATGCAAACACATCACCCT‑C‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/31213‑31371 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acatcaccct‑cAGCCAGGAGGGTGATGTGTTTGCATGGTGTTTACCGATCGGTCAGTGCGAGGGTGAGGGAACGCTCTCGTGGAAAGCTGCCCGCTCGATCTGGATGGTGCAGTGATGGATTTCGAATGCATCGCTGACAGCATCCACGACGG  <  NC_002947/31377‑31236

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.