| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 40697 = | 88 (0.990) | 5 (0.060) | 5/232 | NT | 6.2% | coding (229/1290 nt) | oprP | porin P |
| ? | NC_002947 | 40753 = | 68 (0.810) | coding (285/1290 nt) | oprP | porin P | |||||
TTGCACCGGCTTGAAACCCGTGTAGGTCAGGCTGGCTTCGTCGAAGTAGCCGTCGGAGTCGTTGCCCGTGTTGCGGGAAAGGTCGTAGTTGAGCTGATACTTCCAGTCGCGGTACAGCACGCCACCGAGCTCAAGGTAGGCGCGACGGAAGTA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/40849‑40697‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggaagtaTCAGCTCAACTACGACCTTTCCCGCAACACGGGCAACGACTCCGA‑CGGCTACTTCGACGAAGCCAGCCTGACCTACACGGGTTTCAAGCCGGTGCAACTGCGCTTTGGCCGTTTCTACACCGACTTCGGTCTTGAGAAAGCCACCAGTT > NC_002947/40753‑40901 TTGCACCGGCTTGAAACCCGTGTAGGTCAGGCTGGCTTCGTCGAAGTAGCCGTCGGAGTCGTTGCCCGTGTTGCGGGAAAGGTCGTAGTTGGCCGAATACTTCCAGTCGCGGTACAGCACGCCACCGAGCTCAAGGTAGGCGCGACGGAA > 1:25210/1‑150TTGCACCGGCTTGAAACCCGTGTAGGTCAGGCTGGCTTCGTCGAAGTAGCCGTCGGAGTCGTTGCCCGTGTTGCGGGAAAGGTCGTAGTTGAGCTGATACTTCCAGTCGCGGTACAGCACGCCACCGAGCTCAAGGTAGGCGCGACGGAA < 1:1368228/150‑1TTGCACCGGCTTGAAACCCGTGTAGGTCAGGCTGGCTTCGTCGAAGTAGCCGTCGGAGTCGTTGCCCGTGTTGCGGGAAAGGTCGTAGTTGAGCTGATACTTCCAGTCGCGGTACAGCACGCCACCGAGCTCAAGGTAGGCGCGACGGAA < 2:1865261/150‑1 aacaGGCTTGAAACCCGGGTAGGTCAGGCTGGCTTCGTCGAAGTAGCTGTCGGAGTCGTTGCCCGTGTTGCGGGAAAGGTCGTAGTTGAGCTGATACTTCCAGTCGCGGTACAGCACGCCACCGAGCTCAAGGTAGGCGCGACGGAAGTA > 2:2278010/5‑150 CACCGGCTTGAAACCCGTGTAGGTCAGGCTGGCTTCGTCGAAGTAGCCGTCGGAGTCGTTGCCCGTGTTGCGGGAAAGGTCGTAGTTGAGCTGATACTTCCAGTCGCGGTACAGCACGCCACCGAGCTCAAGGTAGGCGCGACGGAAGTA > 2:1096707/1‑150 GATACTTCCAGTCGCGGTACAGCACGCCACCGAGCTCAAGGTAGGCGCGACGGAAGTATCAGCTCAACTACGACCTTTCCCGCAACACGGGCAACGACTCCGA‑CGGCTACTTCGACGAAGCCAGCCTGACCTACACGGGTTTCAAGCCGG > 1:205412/1‑150 ATACTTCCAGTCGCGGTACAGCACGCCACCGAGCTCAAGGTAGGCGCGACGGAAGTATCAGCTCAACTACGACCTTTCCCGCAACACGGGCAACGACTCCGA‑CGGCTACTTCGACGAAGCCAGCCTGACCTACACGGGTTT > 1:183147/1‑141 ATACTTCCAGTCGCGGTACAGCACGCCACCGAGCTCAAGGTAGGCGCGACGGAAGTATCAGCTCAACTACGACCTTTCCCGCAACACGGGCAACGACTCCGA‑CGGCTACTTCGACGAAGCCAGCCTGACCTACACGGGTTT < 2:183147/141‑1 CAGTCGCGGTACAGCACGCCACCGAGCTCAAGGTAGGCGCGACGGAAGTATCAGCTCAACTACGAC > 1:105387/1‑66 CAGTCGCGGTACAGCACGCCACCGAGCTCAAGGTAGGCGCGACGGAAGTATCAGCTCAACTACGAC < 2:105387/66‑1 GAAGTATCAGCTCAACTACGACCTTTCCCGCAACAC‑GGCCACCACCGAGATCTACTACTTCGACGAAGCCAGCCTGACCTACACGGGTTTCAAGCCGGTGCAACTGCGCTTTGGCCGTTTCTACACCGACTTCGGTCTTGAGAAAGCCAC < 2:64731/150‑1 agGTATCAGCTCAACTACGACCTTTCCCGCAACACGGGCAACGACTCCGA‑CGGCTACTTCGAGGAAGCCAGCCTGACCTACACGGGTTTCACGCGGGTGCATCGAGGCTGTGGCCGTTTGTACACCGCGTTCGGTCTTGAGAAAGCCACC > 2:675209/3‑150 ATCAGCTCAACTACGACCTTTCCCGCAACACGGGCAACGACTCCGA‑CGGCTACTTCGACGAAGCCAGCCTGACCTACACGGGTTTCAAGCCGGTGCAACTGCGCTTTGGCCGTTTCTACACCGACTTCGGTCTTGAGAAAGCCACCAGTT < 1:1865261/150‑1 TTGCACCGGCTTGAAACCCGTGTAGGTCAGGCTGGCTTCGTCGAAGTAGCCGTCGGAGTCGTTGCCCGTGTTGCGGGAAAGGTCGTAGTTGAGCTGATACTTCCAGTCGCGGTACAGCACGCCACCGAGCTCAAGGTAGGCGCGACGGAAGTA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/40849‑40697‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggaagtaTCAGCTCAACTACGACCTTTCCCGCAACACGGGCAACGACTCCGA‑CGGCTACTTCGACGAAGCCAGCCTGACCTACACGGGTTTCAAGCCGGTGCAACTGCGCTTTGGCCGTTTCTACACCGACTTCGGTCTTGAGAAAGCCACCAGTT > NC_002947/40753‑40901 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |