| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 134680 | 56 (0.630) | 6 (0.070) | 5/234 | NT | 9.7% | coding (576/1938 nt) | PP_0129 | GGDEF domain‑containing protein |
| ? | NC_002947 | = 134694 | 58 (0.690) | coding (590/1938 nt) | PP_0129 | GGDEF domain‑containing protein | |||||
GGCGAGTTGAGCGGCTTGCAGGGGCGCGCGCTGTCGGCCCTTGGCAAGCCGAGTGAAGAAGCCCGACCCGGTTTTCTGCAGCGGTTGTTTGGAAGCCGCGAGGAAGATGCACAGGCAGGAGCAGAGCTTGCGCCGGTAGCGTTACCTGCTGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/134528‑134680‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctgccTGGGGTACAACCTC‑GGCAGCAGGTAACGCTACCGGCGCAAGCTCTGCTCCTGCCTGTGCATCTTCCTCGCGGCTTCCAAACAACCGCTGCAGAAAACCGGGTCGGGCTTCTTCACTCGGCTTGCCAAGGGCCGACAGCGCGCGCCC < NC_002947/134694‑134549 GGCGAGTTGAGCGGCTTGCAGGGGCGCGCGCTGTCGGCCCTTGGCAAGCCGAGTGAAGAAGCCCGACCCGGTTTTCTGCAGCGGTTGTTTGGAAGCCGCGAGGAAGATGCACAGGCAGGAGCAGAGCTTGCGCCGGTAGCGTTACCTGCT > 1:2160141/1‑150 GCGAGTTGAGCGGCTTGCAGGGGCGCGCGCTGTCGGCCCTTGGCAAGCCGAGTGAAGAAGCCCGACCCGGTTTTCTGCAGCGGTTGTTTGGAAGCCGCGAGGAAGATGCACAGGCAGGAGCAGAGCTTGCGCCGGTAGCGTTACCTGCTG > 1:915022/1‑150 CAGGGGCGCGCGCTGTCGGCCCTTGGCAAGCCGAGTGAAGAAGCCCGACCCGGTTTTCTGCAGCGGTTGTTTGGAAGCCGCGAGGAAGATGCACAGGCAGGAGCAGAGCTTGCGCCGGTAGCGTTACCTGCT < 1:2157329/132‑1 CAGGGGCGCGCGCTGTCGGCCCTTGGCAAGCCGAGTGAAGAAGCCCGACCCGGTTTTCTGCAGCGGTTGTTTGGAAGCCGCGAGGAAGATGCACAGGCAGGAGCAGAGCTTGCGCCGGTAGCGTTACCTGCT > 2:2157329/1‑132 GCGCGCTGTCGGCCCTTGGCAAGCCGAGTGAAGAAGCCCGACCCGGTTTTCTGCAGCGGTTGTTTGGAAGCCGCGAGGAAGATGCACAGGCAGGAGCAGAGCTTGCGCCGGTAGCGTTACCCGCTGCCTGGGGTACAACCTC‑GGCAGCAG < 1:1105840/150‑1 GCGCGCTGTCGGCCCTTGGCAAGCCGAGTGAAGAAGCCCGACCCGGTTTTCTGCAGCGGTTGTTTGGAAGCCGCGAGGAAGATGCACAGGCAGGAGCAGAGCTTGCGCAGGTAGCGTTACCTGCTGCCTGGGGTACAACCTC‑GGCAGCAG < 1:1285410/150‑1 GCAGGAGCAGAGCTTGCGCCGGTAGCGTTACCTGCTGCCTGGGGTACAACCTC‑GGCAGCAGGTAA < 1:1201825/65‑1 GCAGGAGCAGAGCTTGCGCCGGTAGCGTTACCTGCTGCCTGGGGTACAACCTC‑GGCAGCAGGTAA > 2:1201825/1‑65 GTAGCGTTACCTGCTGCC‑GAGGTTGTACCCCAGGCAGCAGGTAACGCTACCGGCGCAAGCTCTGCTCCTGCCTGTGCATCTTCCTCGCGGCTTCCAAACAACCGCTGCAGAAAACCGGGTCGGGCTTCTTCACTCGGCTTGCCAAGG > 1:664151/1‑147 GTAGCGTTACCTGCTGCC‑GAGGTTGTACCCCAGGCAGCAGGTAACGCTACCGGCGCAAGCTCTGCTCCTGCCTGTGCATCTTCCTCGCGGCTTCCAAACAACCGCTGCAGAAAACCGGGTCGGGCTTCTTCACTCGGCTTGCCAAGG < 2:664151/147‑1 GCTGCCTGGGGTACAACCTC‑GGCAGCAGGTAACGCTACCGGCGCAAGCTCTGCTCCTGCCTGTGCATCTTCCACCCTCCCTCCAAACAACCGCTGCAGAAAACCGGGTCGGGCTTCTTCACTCGGCTTGCCAAGGGCCGACAGCGCGCGC < 2:1891296/150‑1 TGCCTGGGGTACAACCTC‑GGCAGCAGGTAACGCTACCGGCGCAAGCTCTGCTCCTGCCTGTGCATCTTCCTCGCGGCTTCCAAACAACCGCTGCAGAAAACCGGGTCGGGCTTCTTCACTCGGCTTGCCAAGGGCCGACAGCGCGCGCCC > 2:929470/1‑150 GGCGAGTTGAGCGGCTTGCAGGGGCGCGCGCTGTCGGCCCTTGGCAAGCCGAGTGAAGAAGCCCGACCCGGTTTTCTGCAGCGGTTGTTTGGAAGCCGCGAGGAAGATGCACAGGCAGGAGCAGAGCTTGCGCCGGTAGCGTTACCTGCTGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/134528‑134680‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctgccTGGGGTACAACCTC‑GGCAGCAGGTAACGCTACCGGCGCAAGCTCTGCTCCTGCCTGTGCATCTTCCTCGCGGCTTCCAAACAACCGCTGCAGAAAACCGGGTCGGGCTTCTTCACTCGGCTTGCCAAGGGCCGACAGCGCGCGCCC < NC_002947/134694‑134549 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |