| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 235320 = | 100 (1.130) | 17 (0.210) | 11/226 | NT | 14.9% | intergenic (+17/+108) | PP_0183/argH | glutathione S‑transferase/argininosuccinate lyase |
| ? | NC_002947 | 235401 = | 102 (1.250) | intergenic (+98/+27) | PP_0183/argH | glutathione S‑transferase/argininosuccinate lyase | |||||
GTGCGTGCTGCCGTCGTTCGTGGCAAGGCCCTGTTGGCGTCTCGCTAATCCCCCAAGGCGAGGGCTTCGCCCTCGTTCGCGGGCACGCCCGCTCCCACAGGTAATGCACAAGTTTCAAAAACGGTGCAGACCTGTGGGAGCGGGCATGCCCGCGAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/235475‑235320‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgcccgcgaaCGAGGGCGAAGCCCTCGCCTTGGGGGATTAGCGAGACGCCAACAGGGCCTTGCCACGAACGACGGCAGCACGCACCTGCGCCGGCGCCGTACCACCAATGTGGTCACGCGCATTCACCGAGCCTTCCAGCGTCAGCACGGCAAA > NC_002947/235401‑235544 GTGCGTGCTGCCGTCGTTCGTGGCAAGGCCCTGTTGGCGTCTCGCTAATCCCCCAAGGCGAGGGCTTCGCCCTCGTTCGCGGGCACGCCCGCTCCCACAGGTAATGCACAAGTTTCAAAAACGGTGCAGACCTGTGGGAGCGGGCATGCC > 1:61655/1‑150 TGCTGCCGTCGTTCGTGGCAAGGCCCTGTTGGCGTCTCGCTAATCCCCCAAGGCGAGGGCTTCGCCCTCGTTCGCGGGCACGCCCGCTCCCACAGGTAATGCACAAGTTTCAAAAACGGTGCAGACCTGTGGGAGCGGGCATGCCCGCGA > 1:1323388/1‑150 GCTGCCGTCGTTCGTGGCAAGGCCCTGTTGGCGTCTCGCTAATCCCCCAAGGCGAGGGCTTCGCCCTCGTTCGCGGGCACGCCCGCTCCCACAGGTAATGCACAAGTTTCAAAAACGGTGCAGACCTGTGGGAGCGGGCATGCCCGCGAA > 1:2048440/1‑150 GTCGTTCGTGGCAAGGCCCTGTTGGCGTCTCGCTAATCCCCCAAGGCGAGGGCTTCGCCCTCGTTCGCGGGCACGCCCGCTCCCACAGGTAATGCACAAGTTTCAAAAACGGTGCAGACCTGTGGGAGCGGGCATGCCCGCGAA > 2:2050884/1‑144 GTCGTTCGTGGCAAGGCCCTGTTGGCGTCTCGCTAATCCCCCAAGGCGAGGGCTTCGCCCTCGTTCGCGGGCACGCCCGCTCCCACAGGTAATGCACAAGTTTCAAAAACGGTGCAGACCTGTGGGAGCGGGCATGCCCGCGAA < 1:2050884/144‑1 CCCTGTTGGCGTCTCGCTAATCCCCCAAGGCGAGGGCTTCGCCCTCGTTCGCGGGCACGCCCGCTCCCACAGGTAATGCACAAGTTTCAAAAACGGTGCAGACCTGTGGGAGCGGGCATGCCCGCGAA > 1:138339/1‑128 CCCTGTTGGCGTCTCGCTAATCCCCCAAGGCGAGGGCTTCGCCCTCGTTCGCGGGCACGCCCGCTCCCACAGGTAATGCACAAGTTTCAAAAACGGTGCAGACCTGTGGGAGCGGGCATGCCCGCGAA < 2:138339/128‑1 GTTGGCGTCTCGCTAATCCCCCAAGGCGAGGGCTTCGCCCTCGTTCGCGGGCACGCCCGCTCCCACAGGTAATGCACAAGTTTCAAAAACGGTGCAGACCTGTGGGAGCGGGCATGC > 2:735540/1‑117 GTTGGCGTCTCGCTAATCCCCCAAGGCGAGGGCTTCGCCCTCGTTCGCGGGCACGCCCGCTCCCACAGGTAATGCACAAGTTTCAAAAACGGTGCAGACCTGTGGGAGCGGGCATGC < 1:735540/117‑1 TCGTTCGCGGGCACGCCCGCTCCCACAGGTAATGCACAAGTTTCAAAAACGGTGCAGACATGTGTGAGCTGGCATGCCCGCGAACGAGGGCGAAGCCCTCGCCTTGGGGGATTAGCGAGACGCCAACAGGGCCTTGCCACGAACGACGGC > 1:1859258/1‑150 CCGCTCCCACAGGTAATGCACAAGTTTCAAAAACGGTGCAGACCTGGGGGAGCGGGCGTTCCCGCGAACGAGGGCGAAGCCCTCGCCTTGGGGGATTAGCGAGACGCCAACAGGGCCTTGCCACGAACGACGGGAGCACGCACCTGCTCC > 2:411448/1‑150 CACAGGTAATGCACAAGTTTCAAAAACGGTGCAGACCTGTGGGAGCGGGCATGCCCGCGAACGAGGGCGAAGCCCTCGCCTTGGGGGATTAGCGAGACGCCAACAGGGCCTTGCCACGAACGACGGCAGCACGCACCTGCGCCGGCGCCG > 1:1045769/1‑150 ACAGGTAATGCACAAGTTTCAAAAACGGTGCAGACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCTCGCCTTGGGGGATTAGCGAGACGCCAACAGGGCCTTGCCACGAACGACGGCAGCACGCACCTGCGCCGGCGCCGT > 1:2216176/1‑150 ACAGGTAATGCACAAGTTTCAAAAACGGTGCAGACCTGTGGGAGCGGGCATGCCCGCGAACGAGGGCGAAGCCCTCGCCTTGGGGGATTAGTGAGACGCCAACAGGGCCTTGCCACGAACGACGGCAGCACGCACCTGCGCCGGCGCCGT > 2:934828/1‑150 ACAGGTAATGCACAAGTTTCAAAAACGGTGCAGACCTGTGGGAGCGGGCATGCCCGCGAACGAGGGCGAAGCCCTCGCCTTGGGGGATTAGCGAGACGCCAACAGGGCCTTGCCACGAACGACGGCAGCACGCACCTGCGCCGGCGCCGT > 2:735395/1‑150 ACAGGTAATGCACAAGCTTCAAAAACGGTGCAGACCTGTGGGAGCGGGCGTGCCGTCGAACGAGGGCGAAGCCCTCGCCTTGGGGGATTAGCGAGACGCCAACAGGGCCTTGCCACGAACGACGGCAGAACGCACCTGCGCCGGCGCCGT > 2:2347556/1‑150 GTAATGCACAAGTTTCAAAAACGGTGCAGACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCTCGCCTTGGGGGATTAGCGAGACGCCAACAGGGCCTTGCCACGAACGACGGCAGCACGCACCTGCGCCGGCGCCGTACCA > 1:379443/1‑150 GTAATGCACAAGTTTCAAAAACGGTGCAGACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCTCGCCTTGGGGGATTAGCGAGACGCCAACAGGGCC > 1:418970/1‑105 GTAATGCACAAGTTTCAAAAACGGTGCAGACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCTCGCCTTGGGGGATTAGCGAGACGCCAACAGGGCC < 2:418970/105‑1 GTAATGCACAAGTTTCAAAAACGGTGCAGACCTGTGGGAGCGGGCATGCCCGCGAACGAGGGCGAAGCCCTCGCCTTGGGGGATTAGCGAGACGCCAACAGGGCCTTGCCACGAACGACGGCAGCACGCAC > 1:286899/1‑131 GTAATGCACAAGTTTCAAAAACGGTGCAGACCTGTGGGAGCGGGCATGCCCGCGAACGAGGGCGAAGCCCTCGCCTTGGGGGATTAGCGAGACGCCAACAGGGCCTTGCCACGAACGACGGCAGCACGCAC < 2:286899/131‑1 GTAATGCACAAGTTTCAAAAACGGTGCAGACCTGTGGGAGCGGGCATGCCCGCGAA < 1:872636/56‑1 GTAATGCACAAGTTTCAAAAACGGTGCAGACCTGTGGGAGCGGGCATGCCCGCGAA > 2:872636/1‑56 AAGTTTCAAAAACGGTGCAGACCTGTGGGAGCGGGCATGCCCGCGAACGAGGGCGAAGCCCTCGCCTTGGGGGATTAGTGAGACGCCAACAGGGCCTTGCCACGAACGACGGCAGCACGCACCTGCGCCGGCGCCGTACCACCAATGTGG < 1:934828/150‑1 TGTGGGAGCGGGCATGCCCGCGAACGAGGGCGAAGCCCTCGCCTTGGGGGATTAGCGAGACGCCAACAGGGCCTTGCCACGAACGACGGCAGCACGCACCTGCGCCGGCGCCGTACCACCAATGTGGTCACGCGCATTCACCGAGCCTTC < 2:1045769/150‑1 GTGGGAGCGGGCATGCCCGCGAACGAGGGCGAAGCCCTCGCCTTGGGGGATTAGCGAGACGCCAAGAGGGCCTTGCCACGAACGACGGCAGCACGCACCTGCGCCGGCGCCGTACCACCAATGTGGTCACGCGCATTCACCGAGCCTTCC < 2:473984/150‑1 ttcGCGGGCACACCCGCGAACGAGGGCGAAGCCCTCGCCTTGGGGGATTAGCGAGACGCCAACAGGCCCTTGCCACGAACGACGGCAGCACGCACCTGCGCCGGCGCCATACCACCAATGTGGTCACGCGCATTCACCGAGCCTTCCcgg > 2:771268/4‑147 AGCGGGCATGCCCGCGAACTAGGGCGAAGCCCTCGCCTTGGGGGATTAGCGAGACGCCAACAGGGCCTTGCCACGAACGACGGCAGCACGCACCTGCGCCGGCGCCGTACCACCAATGTGGTCACGCGCATTCACCGAGCCTTCCAGCGT < 1:735395/150‑1 CCGCGAACGAGGGCGAAGCCCTCGCCTTGGGGGATTAGCGAGACGCCAACAGGGCCTTGCCACGAACGACGTCAGCACGCACCTGCGCCGGCGCCGTACCACCAATGTGGTCACGCGCATTCACCGAGCCTTCCAGCGTCAGCACGGCAA > 2:1707574/1‑150 CCGCGAACGAGGGCGAAGCCCTCGCCTTGGGGGATTAGCGAGACGCCAACAGGGCCTTGCCACGAACGACGGCAGCACGCACCTGCGCCGGCGCCGTACCACCAATGTGGTCACGCGCATTCACCGAGCCTTCCAGCGTCAGCACGGCAA > 2:646177/1‑150 CCGCGAACGAGGGCGAAGCCCTCGCCTTGGGGGATTAGCGAGACGCCAACAGGGCCTTGCCACGAACGACGG > 2:1188334/1‑72 CCGCGAACGAGGGCGAAGCCCTCGCCTTGGGGGATTAGCGAGACGCCAACAGGGCCTTGCCACGAACGACGG < 1:1188334/72‑1 CGCGAACGAGGGCGAAGCCCTCGCCTTGGGGGATTAGCGAGACGCCAACAGGGCCTTGCCACGAACGACGGCAGCACGCACCTGCGCCGGCGCCGTACCACCAATGTGGTCACGCGCATTCACCGAGCCTTCCAGCGTCAGCACGGCAAA > 2:2293035/1‑150 CGCGAACGAGGGCGAAGCCCTCGCCTTGGGGGATTAGCGAGACGCCAACAGGGCCTTGCCACGAACGACGGCAGCACGCACCTGCGCCGGCGCCGTACCACCAATGTGGTCACGCGCATTCACCGAGCCTTCCAGCGTCAGCACGGCAAA > 1:2322187/1‑150 CGCGAACGAGGGCGAAGCCCTCGCCTTGGGGGATTAGCGAGACGCCAACAGGGCCTTACCACGAACGACGGCAGCACGCACCTGCGCCGGCGCCGTACCACCAATGTGGTCACGCGCATTCACCGAGCCTTCCAGCGTCAGCACGGCAAA < 1:1350713/150‑1 GTGCGTGCTGCCGTCGTTCGTGGCAAGGCCCTGTTGGCGTCTCGCTAATCCCCCAAGGCGAGGGCTTCGCCCTCGTTCGCGGGCACGCCCGCTCCCACAGGTAATGCACAAGTTTCAAAAACGGTGCAGACCTGTGGGAGCGGGCATGCCCGCGAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/235475‑235320‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgcccgcgaaCGAGGGCGAAGCCCTCGCCTTGGGGGATTAGCGAGACGCCAACAGGGCCTTGCCACGAACGACGGCAGCACGCACCTGCGCCGGCGCCGTACCACCAATGTGGTCACGCGCATTCACCGAGCCTTCCAGCGTCAGCACGGCAAA > NC_002947/235401‑235544 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |