New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 26472379 (0.890)11 (0.130) 10/232 NT 13.1% intergenic (+31/‑47) gabD‑I/PP_mr03 succinate‑semialdehyde dehydrogenase/gabT regulatory region
?NC_002947 = 264742 71 (0.850)intergenic (+50/‑28) gabD‑I/PP_mr03 succinate‑semialdehyde dehydrogenase/gabT regulatory region

CCTGATCTCCAACGAAGTGGCGCCGTTCGGTGGTATCAAGGCTTCGGGCCTGGGCCGCGAAGGTTCCAAGTACGGTATCGAGGACTACCTCGAAATCAAATACCTGTGCATCAGCGTCTGATAGCACGGTAAAGGCTTTACCTCTGCCAGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/264572‑264723
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccagcgAGACGTCGCTCTCGCGCCCCGCTGGCAGAGGTAAAGCCTTTACCGTGCTATCAGACGCTGATGCACAGGTATTTGATTTCGAGGTAGTCCTCGATACCGTACTTGGAACCTTCGCGGCCCAGGCCCGAAGCCTTGATACCACC  <  NC_002947/264742‑264600
                                                                                                                                                                                                                                                                                                       
CCTGATCTCCAACGAAGTGGCGCCGTTCGGTGGTATCAAGGCTTCGGGCCTGGGCCGCGAAGGTTCCAAGTACGGTATCGAGGACTACCTCGAAATCAAATACCTGTGCATCAGCGTCTGATAGCACGGTAAAGGCTTTACCTCTGCCAG                                                                                                                                                   <  1:1997041/150‑1
                          tccgatcTATCAAGGCTTCGGGCCTGGGTGGCGACGGTTAACGGTCTGCTATCGAGGACTACCGCGAAATCAAATACCTGTGCATCAGCGTCTGATAGCACGGTAAAGGCTTTACCTCTGCCAGCGAGACGTCGCTCTCGCGCCCCGCTG                                                                                                                         <  2:528734/143‑1
                                              GGCCTGGGCCGCGAAGGTTCCAAGTACGGTATCGAGGACTACCTCGAAATCAAATACCTGTGCATCAGCGTCTGATAGCACGGTAAAGGCTTTACCTCTGCCAGCG                                                                                                                                                 <  2:751090/106‑1
                                              GGCCTGGGCCGCGAAGGTTCCAAGTACGGTATCGAGGACTACCTCGAAATCAAATACCTGTGCATCAGCGCCTGATAGCACGGTAAAGGCTTTACCTCTGCCAGCG                                                                                                                                                 >  1:751090/1‑106
                                                           AAGGTTCCAAGTACGGTATCGAGGACTACCTCGAAATCAAATACCTGTGCATCAGCGTCTGATAGCACGGTAAAGGCTTTACCTCTGCCAGCGAGACGTCGCTCTCGCGCCCCGCTGG                                                                                                                        >  1:2337490/1‑118
                                                           AAGGTTCCAAGTACGGTATCGAGGACTACCTCGAAATCAAATACCTGTGCATCAGCGTCTGATAGCACGGTAAAGGCTTTACCTCTGCCAGCGAGACGTCGCTCTCGCGCCCCGCTGG                                                                                                                        <  2:2337490/118‑1
                                                                TCCAAGTACGGTATCGAGGACTACCTCGAAATCAAATACCTGTGCATCAGCGTCTGATAGCACGGTAAAGGCTTTACCTCTGCCAGCGAGACGTCGCTCTCGCGCCCCGCTGGCA                                                                                                                      <  1:1407736/115‑1
                                                                TCCAAGTACGGTATCGAGGACTACCTCGAAATCAAATACCTGTGCATCAGCGTCTGATAGCACGGTAAAGGCTTTACCTCTGCCAGCGAGACGTCGCTCTCGCGCCCCGCTGGCA                                                                                                                      >  2:1407736/1‑115
                                                                                        CTCGAAATCAAATACCTGTGCATCAGCGTCTGATAGCACGGTAAAGGCTTTACCTCTGCCAGCGAGACGTCGCTCTCGCGCCCCGCTGGCAGAGG                                                                                                                  <  1:82670/95‑1
                                                                                        CTCGAAATCAAATACCTGTGCATCAGCGTCTGATAGCACGGTAAAGGCTTTACCTCTGCCAGCGAGACGTCGCTCTCGCGCCCCGCTGGCAGAGG                                                                                                                  >  2:82670/1‑95
                                                                                         TCGAAATCAAATACCTGTGCATCAGCGTCTGATAGCACGGTAAAGGCTTTACCTCTGCCAGCGAGACGTCGCTCTCGCGCCCCGCTGGCAGA                                                                                                                    >  1:1032770/1‑92
                                                                                         TCGAAATCAAATACCTGTGCATCAGCGTCTGATAGCACGGTAAAGGCTTTACCTCTGCCAGCGAGACGTCGCTCTCGCGCCCCGCTGGCAGA                                                                                                                    <  2:1032770/92‑1
                                                                                              ATCAAATACCTGTGCATCAGCGTCTGATAGCACGGTAAAGGCTTTACCTCTGCCAGCGAGACGTCGCTCTCGCGCCCCGCTGGCAGA                                                                                                                    <  1:1431522/87‑1
                                                                                              ATCAAATACCTGTGCATCAGCGTCTGATAGCACGGTAAAGGCTTTACCTCTGCCAGCGAGACGTCGCTCTCGCGCCCCGCTGGCAGA                                                                                                                    >  2:1431522/1‑87
                                                                                                                                                 GCCAGCGAGACGTCGCTCTCGCGCCCCGCTGGCAGAGGTAAAGCCTTTACCGTGCTATCAGACGCTGATGCACAGGTATTTGATTTCGAGGTAGTCCTCGATACCGTACTTGGAACCTTCGCGGCCCAGGCCCGAAGCCTTGATACCACC  >  1:417301/1‑150
                                                                                                                                                                                                                                                                                                       
CCTGATCTCCAACGAAGTGGCGCCGTTCGGTGGTATCAAGGCTTCGGGCCTGGGCCGCGAAGGTTCCAAGTACGGTATCGAGGACTACCTCGAAATCAAATACCTGTGCATCAGCGTCTGATAGCACGGTAAAGGCTTTACCTCTGCCAGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/264572‑264723
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccagcgAGACGTCGCTCTCGCGCCCCGCTGGCAGAGGTAAAGCCTTTACCGTGCTATCAGACGCTGATGCACAGGTATTTGATTTCGAGGTAGTCCTCGATACCGTACTTGGAACCTTCGCGGCCCAGGCCCGAAGCCTTGATACCACC  <  NC_002947/264742‑264600

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.