| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 278757 | 85 (0.960) | 6 (0.080) | 6/198 | NT | 8.0% | intergenic (‑252/+63) | PP_0224/sctC | DszC family monooxygenase/sulfur compound ABC transporter ATP‑binding protein |
| ? | NC_002947 | = 278780 | 70 (0.980) | intergenic (‑275/+40) | PP_0224/sctC | DszC family monooxygenase/sulfur compound ABC transporter ATP‑binding protein | |||||
AAAATAGTTATGTCGCTACAGCTGATCGCGACAGACGTGTGCTGGTCCGGTGGTCCGGTATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGTAAACCCGCTCCTACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/278586‑278757‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttcgcgggtaaacccgctcctacaGTGCACAGATCTTGAGGCATGTGTGTAGGAGCGGGTTTACCCGCGAAGAGCCCGGCACCTCTGTAACAAATCCCCCTTCTATAAATATTCCAAAAAGTTAGTTCATAAAAATTTTATAAATCATTAGGGTATATATACCGGACCACC < NC_002947/278780‑278634 AAAATAGTTATGTCGCTACAGCTGATCGCGACAGACGTGTGCTGGTCCGGTGGTCCGGTATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTT > 1:50279/1‑150 ATAGTTATGTCGCTACAGCTGATCGCGACAGACGGGTGCTGGTCGGGTGGTCCGGTATATATACCCTAATGATTTATAAAATTTTTATGAACTATCTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCGGAGCTCTTGGC > 1:1887012/1‑150 TAGTTATGTCGCTACAGCTGATCGCGACAGACGTGTGCTGGTCCGGTGGTCCGGTATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCG < 1:548282/150‑1 TAGTTATGTCGCTACAGCTGATCGCGACAGACGTGTGCTGGTCCGGTGGTCCGGTATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCG < 1:111877/150‑1 AGTTATGTCGCTACAGCTGATCGCGACAGACGTGTGCTGGTCCGGTGGTCCGGTATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGG < 1:1484924/150‑1 AGTTATGTCGCTACAGCTGATCGCGACAGACGTGTGCTGGTCCGGTGGTCCGGTATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGG < 1:28196/150‑1 GTCGCTACAGCTGATCGCGACAGACGTGTGCTGGTCCGGTGGTCCGGTATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGTAAAC > 1:819513/1‑150 CAGCTGATCGCGACAGACGTGTGCTGGTCCGGTGGTCCGGTATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGTTTACCCGCgaa < 2:1463007/150‑4 TGGTCCGGTGGTCCGGTATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGG < 2:254596/113‑1 TGGTCCGGTGGTCCGGTATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGG > 1:254596/1‑113 TATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGTAAACCCGCTCCTA > 1:2102382/1‑110 TATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGTAAACCCGCTCCTA < 2:2102382/110‑1 TACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGTAAACCCGCTCCTACAGTGCACAGATCTTGAGGCATGTGTGTAGGAGCGG < 2:1054564/142‑1 TACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGTAAACCCGCTCCTACAGTGCACAGATCTTGAGGCATGTGTGTAGGAGCGG > 1:1054564/1‑142 CCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGTAAACCCGCTC > 2:2051331/1‑101 CCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGTAAACCCGCTC < 1:2051331/101‑1 TTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGTAAACCCGCT > 2:582252/1‑82 TTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGTAAACCCGCT < 1:582252/82‑1 TTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGT > 2:1062542/1‑58 TTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGT < 1:1062542/58‑1 ATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGTAAACCCGCTCCTACAGTGCACAGATCTTGAGGCATGTGTGTAG > 1:672696/1‑91 ATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGTAAACCCGCTCCTACAGTGCACAGATCTTGAGGCATGTGTGTAG < 2:672696/91‑1 AAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGTAAACCCGCTC > 2:1358422/1‑50 AAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGTAAACCCGCTC < 1:1358422/50‑1 GGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGTAAACCCGCTCCTACAGTGCACAGATCTTGAGGCATGTGTGTAGGAGCGGG < 2:2011428/88‑1 GGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGTAAACCCGCTCCTACAGTGCACAGATCTTGAGGCATGTGTGTAGGAGCGGG > 1:2011428/1‑88 AGGTGCCGGGCTCTTCGCGGGTAAACCCGCTCCTA > 2:2089834/1‑35 AGGTGCCGGGCTCTTCGCGGGTAAACCCGCTCCTA < 1:2089834/35‑1 TTCGCGGGTAAACCCGCTCCTACAGTGCACAGATCTTGAGGCATGTGTGTAGGTGCGGGTTTACCCGCGAAGAGCCCGGCACCTCTGTAACAAATACACCGTCTATAAATATTCCAAAAAGTTAGTTCATAAAAATTTTATAAATCATTA < 1:1044403/150‑1 TTCGCGGGTAAACCCGCTCCTACAGTGCACAGATCTTGAGGCATGTGTGTAGGAGCGGGTTTACCCGCGAAGAGCCCGGCACCTCTGTAACAAATCCCCCTTCTATAAATATTCCAAAAAGTTAGTTCATAAAAATTTTATAAATCATTA > 1:2321651/1‑150 TAAACCCGCTCCTACAGTGCACAGATCTTGAGGCATGTGTGTAGGAGCGGGTTTACCC > 2:1172833/1‑58 TAAACCCGCTCCTACAGTGCACAGATCTTGAGGCATGTGTGTAGGAGCGGGTTTACCC < 1:1172833/58‑1 CCGCTCCTACAGTGCACAGATCTTGAGGCATGTGTGTAGGAGCGGGTTTACCCGCGAAGAGCCCGGCACCTCTGTAACAAATCCCCCTTCTATAAATATTCCAAAAAGTTAGTTCATAAAAATTTTATAAATCATTAGGGTATATATACC > 2:1634482/1‑150 CCGCTCCTACAGTGCACAGATCTTGAGGCATGTGTGTAGGAGCGGGTTTACCCGCGAAGAGCCCGGCACCTCTGTAACAAATCCCCCTTCTATAAATATTCCAAAAAGTTAGTTCATAAAAATTTTATAAATCATTAGGGTATATATACC > 2:448587/1‑150 CGCTCCTACAGTGCACAGATCTTGAGGCATGTGTGTAGGAGCGGGTTTACCCGCGAAGAGCCCGGCACCTCTGTAACAAATCCCCCTTCTATAAATATTCCAAAAAGTTAGTTCATAAAAATTTTATAAATCATTAGGGTATATATACCG < 1:379754/150‑1 TCCTACAGTGCACAGATCTTGAGGCATGTGTGTAGGAGCGGGTTTACCCGCGAAGAGCCCGGCACCTCTGTAACAAATCCCCCTTCTATAAATATTCCAAAAAGTTAGTTCATAAAAATTTTATAAATCATTAGGGTATATATACCGGAC < 2:486308/150‑1 CTACAGTGCACAGATCTTGAGGCATGTGTGTAGGAGCGGGTTTACCCGCGAAGAGCCCGGCACCTCTGTAACAAATCCCCCTTCTATAAATATTCCAAAAAGTTAGTTCATAAAAATTTTATAAATCATTAGGGTATATATACCGGACCA > 2:658267/1‑150 CTACAGTGCACAGATCTTGAGGCATGTGTGTAGGAGCGGGTTTACCCGCGAAGAGCCCGGCACCTCTGTAACAAATCCCCCTTCTATAAATATTCCAAAAAGTTAGTTCATAAAAATTTTATAAATCATTAGGG > 1:40868/1‑134 CTACAGTGCACAGATCTTGAGGCATGTGTGTAGGAGCGGGTTTACCCGCGAAGAGCCCGGCACCTCTGTAACAAATCCCCCTTCTATAAATATTCCAAAAAGTTAGTTCATAAAAATTTTATAAATCATTAGGG < 2:40868/134‑1 ACAGTGCACAGATCTTGAGGCATGTGTGTAGGAGCGGGTTTACCCGCGAAGAGCCCGGCACCTCTGTAACAAATCCCCCTTCTATAAATATTCCAAAAAGTTAGTTCATAAAAATTTTATAAATTTTTAGTTAATGTATAGCCGACCACC < 2:799431/150‑1 AAAATAGTTATGTCGCTACAGCTGATCGCGACAGACGTGTGCTGGTCCGGTGGTCCGGTATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGTAAACCCGCTCCTACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/278586‑278757‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttcgcgggtaaacccgctcctacaGTGCACAGATCTTGAGGCATGTGTGTAGGAGCGGGTTTACCCGCGAAGAGCCCGGCACCTCTGTAACAAATCCCCCTTCTATAAATATTCCAAAAAGTTAGTTCATAAAAATTTTATAAATCATTAGGGTATATATACCGGACCACC < NC_002947/278780‑278634 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |