| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 363530 = | 71 (0.800) | 6 (0.080) | 5/212 | NT | 9.2% | intergenic (‑45/+122) | lcdH/PP_0303 | L‑carnitine dehydrogenase/dehydrocarnitine cleavage enzyme |
| ? | NC_002947 | 363623 = | 57 (0.750) | intergenic (‑138/+29) | lcdH/PP_0303 | L‑carnitine dehydrogenase/dehydrocarnitine cleavage enzyme | |||||
CCGGCAGAAGGCCGGGAAAAAATGAACCTCAAGCGCCGCTGATCCTTTCAACGATCGCAAATGCGCCGAAGACCCTGTGGGAGCGGGCGTGCCCGTGAAGCAGGCAACGCGATGGATGGCACCGGCCGTGCCGGTGTTCGCGGGCATGCCCGCTCCCACAGGGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/363693‑363530‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcccgctcccacagggtCTTCGGCGCATTTGCGATCGTTGAAAGGATCAGCGGCGCTTGAGGTTCATTTTTTCCCGGCCTTCTGCCGGGCTGAGCACGCGGCCACCCATGCGGGTGATGATCTCGCTGGCGCGTTCCACCAGTTGGCCATTGCTGGCCAGCACGCC > NC_002947/363623‑363771 CCGGCAGAAGGCCGGGAAAAAATGAACCTCAAGCGCCGCTGATCCTTTCAACGATCGCAAATGCGCCGAAGACCCTGTGGGAGCGGGCGTGCCCGTGAAGCAGGCAACGCGATGGATGGCACTGGCCGTGCCGGTGTTCGCGGGCATGCC < 1:1173311/150‑1 CGGCAGAAGGCCGGGAAAAAATGAACGTTATGCGCCGCTGATCCTTTCAACGATCGCAAATGCGCCGAAGACCCTGTGGGAGCGGGCGTGCCCGTGAAGCAGGCAACGCGATGGATGACACCGGCCGTGCCGGTGTTCGCGGGCATGCCC > 1:64331/1‑150 AAGGCCGGGAAAAAATGAACCTCAAGCGCCGCTGATCCTTTCAACGATCGCAAATGCGCCGAAGACCCTGTGGGAGCGGGCGTGCCCGTGAAGCAGGCAACGCGATGGATGGCACCGGCCGTGCCGGTGTTCGCGGGCATGCCCGCTCCC > 1:1728625/1‑150 AGGGCGGGAAAAAATGAACCTCAAGCGCCGCTGATCCTTTCAACGATCGCAAATGCGCCGAAGACCCTGTGGGAGAGGGCGTGCCCGTGACGCAGGCAACGCGCTGGATGGCACCGGCCGTCCCGGGGTTCGCGGGCATGCCCGCTCCCc > 2:1387921/1‑149 CCGGGAAAAAATGAACCTCAAGCGCCGCTGATCCTTTCAACGATCGCAAATGCGCCGAAGACCCTGTGGGAGCGGGCGTGCCCGTGAAGCAGGCAACGCGATGGATGGCACCGGCCGTGCCGGTGTTCGCGGGCATGCCCGCTCCCACAG < 2:213831/150‑1 CGGGAAAAAATGAACCTCAAGCGCCGCTGATCCTTTCAACGATCGCAAATGCGCCGAAGACCCTGTGGGAGCGGGCGTGCCCGTGAAGCAGGCAACGCGATGGATGGCACCGGCCGTGCCGGTGTTCGCGGGCATGCCCGCTCCCACAGG < 2:1080636/150‑1 CGGGAAAAAATGAACCTCAAGCGCCGCTGATCCTTTCAACGATCGCAAATGCGCCGAAGACCCTGTGGGAGCGGGCGTGCCCGTGAAGCAGGCAACGCGATGGATGGCACCGGCCGTGCCGGTGTTCGCGGGCATGCCCGCTCCCACAGG > 2:546572/1‑150 CGGGAAAAAATGAACCTCAAGCGCCGCTGATCCTTTCAACGATCGCAAATGCGCCGAAGACCCTGTGGGAGCGGGCGTGCCCGTGAAGCAGGCAACGCGATGGATGGCACCGGCCGTGCCGGTGTTCGCGGGCATGCCCGCTCCCACAGG > 2:1548593/1‑150 CGGGAAAAAATGAACCTCAAGCGCCGCTGATCCTTTCAACGATCGCAAATGCGCCGAAGACCCTGTGGGAGCGGGCGGGCCCGTGAAGCAGGCAACGCGATGGATGGCACCGGCCGTGCCGGTGTTCGCGGGCATGCCCGCTCCCACAGG > 2:1496785/1‑150 GGAAAAAATGAACCTCAAGCGCCGCTGATCCTTTCAACGATCGCAAATGCGCCGAAGACCCTGTGGGAGCGGGCGTGCCCGTGAAGCAGGCAACGCGATGGATGGCACCGGCCGTGCCGGTGTTCGCGGGCATGCCCGCTCCCACAGGGT < 2:1243149/150‑1 AATGAACCTCAAGCGCCGCTGATCCTTTCAACGATCGCAAATGCGCCGAAGACCCTGTGGGAGCGGGCGTGCCCGTGAAGCAGGCAACGCGATGGATGGCACCGGCCGTGCCGGTGTTCGCGGGCATGCCCGCTCCCACAGG < 2:691858/142‑1 AATGAACCTCAAGCGCCGCTGATCCTTTCAACGATCGCAAATGCGCCGAAGACCCTGTGGGAGCGGGCGTGCCCGTGAAGCAGGCAACGCGATGGATGGCACCGGCCGTGCCGGTGTTCGCGGGCATGCCCGCTCCCACAGG > 1:691858/1‑142 AGACCCTGTGGGAGCGGGCGTGCCCGTGAAGCAGGCAACGCGATGGATGGCACCGGCCGTGCCGGTGTTCGCGGGCATGCCCGCTCCCACAGG < 2:433593/93‑1 AGACCCTGTGGGAGCGGGCGTGCCCGTGAAGCAGGCAACGCGATGGATGGCACCGGCCGTGCCGGTGTTCGCGGGCATGCCCGCTCCCACAGG > 1:433593/1‑93 GCGTGCCCGTGAAGCAGGCAACGCGATGGATGGCACCGGCCGTGCCGGTGTTCGCGGGCATGCCCGCTCCCACAGGGTCTTCGGCGCATTTGCGATCGTTGAAAGGATCAGCGGCGCTTGAGGTTCATTTTTTCCCGGCCTTCTGCCGGG > 1:333216/1‑150 GTGCCCGTGAAGCAGGCAACGCGATGGATGGCACCGGCCGTGCCGGTGTTCGCGGGCATGCCCGCTCCCACAGGGTCTTCGGCGCATTTGCGATCGTTGAAAGGATCAGCGGCGCTTGAGGTTCATTTTTTCCCGGCCTTCTGCCGGGCT > 2:420266/1‑150 CCGTGAAGCAGGCAACTCGATGGATGGCACCGGCCGTGCCGGTGTTCGCGGGCATGCCCGCTCCCACAGGGTCTTCGGCGCATTTGCGATCGTTGAAAGGATCAGCGGCGCTTGAG < 1:145006/116‑1 CCGTGAAGCAGGCAACTCGATGGATGGCACCGGCCGTGCCGGTGTTCGCGGGCATGCCCGCTCCCACAGGGTCTTCGGCGCATTTGCGATCGTTGAAAGGATCAGCGGCGCTTGAG > 2:145006/1‑116 CCGTGAAGCAGGCAACGCGATGGATGGCACCGGCCGTGCCGGTGTTCGCGGGCATGCCCGCTCCCACAGGGTCTTCGGCCAATTTGCGATCGTTGAAAGGATCAGCGGCGCTTGAGGTTACTTGTTTCACTGTCTTCTGCCGGGCTGAGC > 1:1731487/1‑150 GCAACGCGATGGATGGCACCGGCCGTGCCGGTGTTCGCGGGCATGCCCGCTCCCACAG < 1:740349/58‑1 GCAACGCGATGGATGGCACCGGCCGTGCCGGTGTTCGCGGGCATGCCCGCTCCCACAG > 2:740349/1‑58 CGTGCCGGTGTTCGCGGGCATGCCCGCTCCCACAGGGTCTTCGGCGCATTTGCGATCGTTGAAAGGATGGTGATTGCTTGAGGTTCATTTTTTCCCGGCCTTCTGCCGGGCTGAGCACGCGGCCACCCATGCGGGTGATGATCTCGCTGG < 1:420266/150‑1 CCCGCTCCCACAGGGTCTTCGGCGCATTTGCGATCGTTGAAAGGATCAGCGGCGCTTGAGGTTCATTTTTTCCCGGCCTTCTGCCGGGCTGAGCACGCGGCCACCCATGCGGGTGATGATCTCGCTGGCGCGTTCCACCAGTTGGCCATT > 1:1064254/1‑150 CCCGCTCCCACAGGGTCTTCGGCGCATTTGCGATCGTTGAAAGGATCAGCGGCGCTTGAGGTTCATTTTTTCCCGGCCTTCTGCCGGGCTGAGCACGCGGCCACCCATGCGGGTGATGATCTCGCTGGCGCGTTCCACCAGTTGG > 2:1526315/1‑145 CCCGCTCCCACAGGGTCTTCGGCGCATTTGCGATCGTTGAAAGGATCAGCGGCGCTTGAGGTTCATTTTTTCCCGGCCTTCTGCCGGGCTGAGCACGCGGCCACCCATGCGGGTGATGATCTCGCTGGCGCGTTCCACCAGTTGG < 1:1526315/145‑1 CTCCCACAGGGTCTTCGGCGCATTTGCGATCGTTGAAAGGATCAGCGGCGCTTGAGGTTCATTTTTTCCCGGCCTTCTGCCGGGCTGAGCACGCGGCCACCCATGCGGGTGATGATCTCGCTGGCGCGTTCCACCAGTTGGCCATTGCTG < 2:2039299/150‑1 CTCCCACAGGGTCTTCGGCGCATTTGCGATCGTTGAAAGGATCAGCGGCGCTTGAGGTTCATTTTTTCCCGGCCTTCTGCCGGGCTGAGCACGCGGCCACCCATGCGGGTGATGATCTCGCTGGCGCGTTCCACCAGTTGGCCATTGCTG < 1:1288247/150‑1 CTCCCACAGGGTCTTCGGCGCATTTGCGATCGTTGAAAGGATCAGCGGCGCTTGAGGTTCATTTTTTCCCGGCCTTCTGCCGGGCTGAGCACGCGGCCACCCATGCGGGTGATGATCTCGCTGGCGCGTTCCACCAGTTGGCCATTGCTG < 2:829118/150‑1 CCCACAGGGTCTTCGGCGCATTTGCGATCGTTGAAAGGATCAGCGGCGCTTGAGGTTCATTTTTTCCCGGCCTTCTGCCGGGCTGAGCACGCGGCCACCCATGCGGGTGATGATCTCGCTGGCGCGTTCCACCAGTTGGCCATTGCTGGC < 2:2306642/150‑1 CACAGGGTCTTCGGCGCATTTGCGATCGTTGAAAGGATCAGCGGCGCTTGAGGTTCATTTTTTCCCGGCCTTCTGCCGGGCTGAGCACGCGGCCACCCATGCGGGTGATGATCTCGCTGGCGCGTTCCACCAGTTGGCCATTGCTGGCCA < 1:628897/150‑1 CACAGGGTCTTCGGCGCATTTGCGATCGTTGAAAGGATCAGCGGCGCTTGAGGTTCATTTTTTCCCGGCCTTCTGCCGGGCTGAGCACGCGGCCACCCATGCGGGTGATGATCTCGCTGGCGCGTTCCACCAGTTGGCCATTGCTGGCCA < 2:1064254/150‑1 CACAGGGTCTTCGGCGCATTTGCGATCGTTGAAAGGATCAGCGGCGCTTGAGGTTCATTTTTTCCCGGCCTTCTGCCGGGCTGAGCACGCGGCCACCCATGCGGGTGAT < 2:689385/109‑1 CACAGGGTCTTCGGCGCATTTGCGATCGTTGAAAGGATCAGCGGCGCTTGAGGTTCATTTTTTCCCGGCCTTCTGCCGGGCTGAGCACGCGGCCACCCATGCGGGTGAT > 1:689385/1‑109 CACAGGGTCTTCGGCGCATTTGCGATCGTTGAAAGGATCAGCGGCGCTTGAGGTTCATTTTTTCCCGGCCTTCTGACGGGCTGAGCACGCGGCCACCCATGCGGGTGATGATCTCGCTGGCGCGTTCCACCAGTTGGCCATGTCTGGCCA > 2:308196/1‑150 GGTCTTCGGCGCATTTGCGATCGTTGAAAGGATCAGCGGCGCTTGAGGTTCATTTTTTCCCGGCCTTCTGCCGGGCTGAGCACGCGGCCACCCATGCGGGTGATGATCTCGCTGGCGCGTTCCACCAGTTGGCCATTGCTGGCCAGCACc > 2:229069/1‑149 GGTCTTCGGCGCATTTGCGATCGTTGAAAGGATCAGCGGCGCTTGAGGTTCATTTTTTCCCGGCCTTCTGCCGGGCTGAGCACGCGGCCACCCATGCGGGTGATGATCTCGCTGGCGCGTTCCACCAGTTGGCCATTGCTGGCCAGCACG > 1:26811/1‑150 TCTTCGGCGCATTTGCGATCGTTGAAAGGATCAGCGGCGCTTGAGGTTCATTTTTTCCCGGCCTTCTGCCGGGCTGAGCACGCGGCCACCCATGCGGGTGATGATCTCGCTGGCGCGTTCCACCAGTTGGCCATTGCTGGCCAGCACGCC > 1:1896748/1‑150 CCGGCAGAAGGCCGGGAAAAAATGAACCTCAAGCGCCGCTGATCCTTTCAACGATCGCAAATGCGCCGAAGACCCTGTGGGAGCGGGCGTGCCCGTGAAGCAGGCAACGCGATGGATGGCACCGGCCGTGCCGGTGTTCGCGGGCATGCCCGCTCCCACAGGGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/363693‑363530‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcccgctcccacagggtCTTCGGCGCATTTGCGATCGTTGAAAGGATCAGCGGCGCTTGAGGTTCATTTTTTCCCGGCCTTCTGCCGGGCTGAGCACGCGGCCACCCATGCGGGTGATGATCTCGCTGGCGCGTTCCACCAGTTGGCCATTGCTGGCCAGCACGCC > NC_002947/363623‑363771 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |