| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 386636 = | 124 (1.400) | 6 (0.070) | 6/236 | NT | 5.6% | intergenic (‑98/‑228) | ltaE/glyA‑I | low specificity l‑threonine aldolase/serine hydroxymethyltransferase |
| ? | NC_002947 | 386719 = | 84 (0.990) | intergenic (‑181/‑145) | ltaE/glyA‑I | low specificity l‑threonine aldolase/serine hydroxymethyltransferase | |||||
GCCGGGTCAGATGCCTGCGCACGCCTTGCAATGGCGCGTTTACGACATTCGCTGTTGTGCTGTTTGCGCTGGCCCTTTCGCGGGTGAACCCGCTCCTACAGTGATTGGCGTTTGCAGGACCATTGTGGGGGCGGGCGCGCCCGCGAAGGGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/386788‑386636‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggccAGCGCAAACAGCACAACAGCGAATGTCGTAAACGCGCCATTGCAAGGCGTGCGCAGGCATCTGACCCGGCCCCACCAGTCATAACATCGCCACAAAGGGCCACAGTGCCCCACGACAAAAAACGATCGCTGCCGGGAGATACACAATGT > NC_002947/386719‑386867 GCCGGGTCAGATGCCTGCGCACGCCTTGCAATGGCGCGTTTACGACATTCGCTGTTGTGCTGTTTGCGCTGGCCCTTTCGCGGGTGAACCCGCTCCTACAGTGATTGGCGTTTGCAGGACCATTGTGGGGGCGGGCGCGCCCGCGAAGGG > 1:1683748/1‑150GCCGGGTCAGATGCCTGCGCACGCCTTGCAATGGCGCGTTTACGACATTCGCTGTTGTGCTGTTTGCGCTGGCCCTTTCGCGGGTGAACCCGCTCCTACAGTGATTGGCGTTTGCAGGACCATTGTGGGGGCGGGCGCGCCCGCGAAGGG < 2:1412930/150‑1GCCGGGTCAGATGCCTGCGCACGCCTTGCAATGGCGCGTTTACGACATTCGCTGTTGTGCTGTTTGCGCTGGCCCTTTCGCGGGTGAACCCGCTCCTACAGTGATTGGCGTTTGCAGGACCATTGTGGGGGCGGGCGCGCCCGCGAAGGG < 2:1445445/150‑1 GGGTCAGATGCCTGCGCACGCCTTGGCCACACGCGTTTACGACATTCGCTGTTGTGCTGTTTGCGCTGGCCCTTTCGCGGGTGAACCCGCTCCTACAGTGATTGGCGTTTGCAGGACCATTGTGGGGGCGGGCGCGCCCGCGAAGGGGCC > 1:1268916/1‑150 GGGTCAGATGCCTGCGCACGCCTTGCAATGGCGCGTTTACGACATTCGCTGTTGTGCTGTTTGCGCTGGCCCTTTCGCGGGTGAACCCGCTCCTACAGTGATTGGCGTTTGCAGGACCATTGTGGGGGCGGGCGCGCCCGCGAAGGGGCC < 1:2315167/150‑1 GCCCTTTCGCGGGTGAACCCGCTCCTACAGTGATTGGCGTTTGCAGGACCATTGTGGGGGCGGGCGCGCCCGCGAAGGGGCCAGCGCAAACAGCACAACAGCGAATGTCGTAAACGCGCCATTGCAAGGCGTGCGCAGGAATCTGACCCG > 2:649606/1‑150 CTTTCGCGGGTGAACCCGCTCCTACAGTGATTGGCGTTTGCAGGACCATTGTGGGGGCGGGCGCGCCCGCGAAGGGGCCAGCGCAAACAGCACAACAGCGAATGTCGTAAACGCGCCATTGCAAGGCGTGCGCAGGAATCTGACCCGGCC < 1:649606/150‑1 TTCGCGGGTGAACCCGCTCCTACAGTGATTGGCGTTTGCAGGACCATTGTGGGGGCGGGCGCGCCCGCGAAGGGGCCAGCGCAAACAGCACAACAGCGAATGTCGTAAACGCGCC < 1:843395/115‑1 TTCGCGGGTGAACCCGCTCCTACAGTGATTGGCGTTTGCAGGACCATTGTGGGGGCGGGCGCGCCCGCGAAGGGGCCAGCGCAAACAGCACAACAGCGAATGTCGTAAACGCGCC > 2:843395/1‑115 GGTGAACCCGCTCCTACAGTGATTGGCGTTTGCAGGACCATTGTGGGGGCGGGCGCGCCCGCGAAGGGGCCAGCGCAAACAGCACAACAGCGAATGTCGTAAACGCGCCATTGCAAGGCGTGCGCAGGCATCTGACCCGGCCCCACCAGT > 2:1813881/1‑150 TGGGGGCGGGCGCGCCCGCGAAGGGGCCAGCGCAAACAGCACAACAGCGAATGTCGTAAACGCGCCATTGCAAGGCGTGCGCAGGCATCTGACCCGGCCCCACCAGTCATAACATCGCCACAAAGGGCCACAGTGCCCCACGACAAAAAA < 1:1813881/150‑1 GCCAGCGCAAACAGCACAACAGCGAATGTCGTAAACGCGCCATTGCAAGGCGTGCGCAGGCATCTGACCCGGCCCCACCAGTCATAACATCGCCACAAAGGGCCACAGTGCCCCACGACAAAAAACGATCGCTGCCGGGAGATACACAAT > 1:169272/1‑150 GCCAGCGCAAACAGCACAACAGCGAATGTCGTAAACGCGCCATTGCAAGGCGTGCGCAGGCATCTGACCCGGCCCCACCAGTCATAACATCGCCACAAAGGGCCACAGTGCCCCACGACAAAAAACGATCGCTGCCGGGAGATACACAAT < 1:344019/150‑1 GCCAGCGCAAACAGCAAAACAGCGAATGTCGTAAACGCGCCATTGCAAGGCGTGCGCAGGCATCTGACCCGGCCCAAACAGTCATAACATCGCCACAAAGGGCCACAGTGCCCCACGACAAAAAACGATCGCTGCCGGGAGATACACAAT < 2:241665/150‑1 CAGCGCAAACAGCACAACAGCGAATGTCGTAAACGCGCCATTGCAAGGCGTGCGCAGGCATCTGACCCGGCCCCACCAGTCATAACATCGCCACAAAGGGCCACAGTGCCCCACGACAAAAAACGATCGCTGCCGGGAGATACACAATGT > 1:367507/1‑150 GCCGGGTCAGATGCCTGCGCACGCCTTGCAATGGCGCGTTTACGACATTCGCTGTTGTGCTGTTTGCGCTGGCCCTTTCGCGGGTGAACCCGCTCCTACAGTGATTGGCGTTTGCAGGACCATTGTGGGGGCGGGCGCGCCCGCGAAGGGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/386788‑386636‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggccAGCGCAAACAGCACAACAGCGAATGTCGTAAACGCGCCATTGCAAGGCGTGCGCAGGCATCTGACCCGGCCCCACCAGTCATAACATCGCCACAAAGGGCCACAGTGCCCCACGACAAAAAACGATCGCTGCCGGGAGATACACAATGT > NC_002947/386719‑386867 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |