New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 436353 = | 73 (0.820) | 9 (0.110) | 9/228 | NT | 13.4% | intergenic (+183/+50) | PP_0357/PP_0358 | ACT domain‑containing protein/membrane protein |
? | NC_002947 | 436386 = | 49 (0.600) | intergenic (+216/+17) | PP_0357/PP_0358 | ACT domain‑containing protein/membrane protein |
AGCATTTGTCGTCGAGCACCCTGGCGGCCTTCATGTTCATCTGGGCAGGTTTGGCGATTTACAGCGTCGATGCATGGCTGAACTTGCGCAAACGTAGCTGATCAGAAAACGATCAAAACTCTGCAGGTCATGTAGCGCCTGGCCTGCAGAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/436503‑436353 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cctgcagagTTTTGATCGTTTTCTGATCAGCTACGTTTGCGCAAGTTCAGCCATGCATCGACGCTGTAAATCGCCAAACCTGCCCAGATGAACATGAAGGCCGCCAGGGTGCTCGACGACAAATGCTCGTCGAACAGCACTACGGCCTGCAACAG > NC_002947/436386‑436531 AGCATTTGTCGTCGAGCACCCTGGCGGCCTTCATGTTCATCTGGGCAGGTTTGGCGATTTACAGCGTCGATGCATGGCTGAACTTGCGCAAACGTAGCTGATCAGAAAACGATCAAAACTCTGCAGGTCATGTAGCGCCTGGCCTGCAGA < 2:1229210/150‑1 CTTCATGTTCATCTGGGCAGGTTTGGCGATTTACAGCGTCGATGCATGGCTGAACTTGCGCAAACGTAGCTGATCAGAAAACGATCAAAACTCTGCAGGTCATGTAGCGCCTGGCCTGC < 1:243863/119‑1 CTTCATGTTCATCTGGGCAGGTTTGGCGATTTACAGCGTCGATGCATGGCTGAACTTGCGCAAACGTAGCTGATCAGAAAACGATCAAAACTCTGCAGGTCATGTAGCGCCTGGCCTGC > 2:243863/1‑119 TCAAAACTCTGCAGGTCATGTAGCGCCTGGCCTGCAGAGTTTTGATCGTTTTCTGATCAGCTACGTTTGCGCAAGTTCAGCCATGCATCGACGCTGTAAATCGCCAAACCTGCCCAGATGAACATGAAGGCCGCCAGGGTGCTCGACGAC > 1:210788/1‑150 AAACTCTGCAGGTCATGTAGCGCCTGGCCTGCAGAGTTTTGATCGTTTTCTGATCAGCTACGTTTGCGCAAGTTCAGCCATGCATCGACGCTGTAAATCGCCAAACCTGCCCAGATGAACATGAA > 1:255188/1‑125 AAACTCTGCAGGTCATGTAGCGCCTGGCCTGCAGAGTTTTGATCGTTTTCTGATCAGCTACGTTTGCGCAAGTTCAGCCATGCATCGACGCTGTAAATCGCCAAACCTGCCCAGATGAACATGAA < 2:255188/125‑1 AACTCTGCAGGTCATGTAGCGCCTGGCCTGCAGAGTTTTGATCGTTTTCTGATCAGCTACGTTTGCGCAAGTTCAGCCATGCATCGACGCTGTAAATCGCCAAACCTGCCCAGATGAACATGAAG < 1:1274908/125‑1 AACTCTGCAGGTCATGTAGCGCCTGGCCTGCAGAGTTTTGATCGTTTTCTGATCAGCTACGTTTGCGCAAGTTCAGCCATGCATCGACGCTGTAAATCGCCAAACCTGCCCAGATGAACATGAAG > 2:1274908/1‑125 TCTGCAGGTCATGTAGCGCCTGGCCTGCAGAGTTTTGATCGTTTTCTGATCAGCTACGTTTGCGCAAGTTCAGCCATGCATCGACGCTGTAAATCGCCAAACCTGCCCAGATGAACATGAAGGCCGCCAGGGTGCTCGACGACAAATGCT > 2:1650321/1‑150 GCAGGTCATGTAGCGCCTGGCCTGCAGAGATTTGATCGTTTTCTGATCAGCTACGTTTGCGCAAGTTCAGCCATGCATCGACGCTGTAAATCGCCAAACCTGCCCAGATGAACATGAAGGCCGCCAGGGTGCTCGACGACAAATGCTCGT > 1:185721/1‑150 GTCATGTAGCGCCTGGCCTGCAGAGTTTTGATCGTTTTCTGATCAGCTACGTTTGCGCAAGTTCAGCCATGCATCGACGCTGTAAATCGCCAAACCTGCCCAGA < 1:1717561/104‑1 GTCATGTAGCGCCTGGCCTGCAGAGTTTTGATCGTTTTCTGATCAGCTACGTTTGCGCAAGTTCAGCCATGCATCGACGCTGTAAATCGCCAAACCTGCCCAGA > 2:1717561/1‑104 GCAGAGTTTTGATCGTTTTCTGATCAGCTACGTTTGCGCAAGTTCAGCCATGCATCGACGCTGTAAATCGCCAAACCTGCCCAGATGAACATGAAGGCCGCCAGGGTGCTCGACGACAAATGCTCGTCGAACAGCACTACGGCCTGCAAC < 1:2177839/150‑1 CAGAGTTTTGATCGTTTTCTGATCAGCTACGTTTGCGCAAGTTCAGCCATGCATCGACGCTGTAAATCGCCAAACCTGCCCAGATGAACATGAAGGCCGCCAGGGTGCTCGACGACAAATGCTCGTCGAACAGCACTACGGCCTGCAACA > 2:823831/1‑150 AGAGTTTTGATCGTTTTCTGATCAGCTACGTTTGCGCAAGTTCAGCCATGCATCGACGCTGTAAATCGCCAAACCTGCCCAGATGAACATGAAGGCCGCCAGGGTGCTCGACGACAAATGCTCGTCGAACAGCACTACGGCCTGCAACAG > 2:1206849/1‑150 GAGTTTTGATCGTTTTCTGATCAGCTACGTTTGCGCAAGTTCAGCCATGCATCGACGCTGTAAATCGCCAAACCTGCCCAGATGAACATGAAGGCCGCCAGG < 2:2049570/102‑1 GAGTTTTGATCGTTTTCTGATCAGCTACGTTTGCGCAAGTTCAGCCATGCATCGACGCTGTAAATCGCCAAACCTGCCCAGATGAACATGAAGGCCGCCAGG > 1:2049570/1‑102 AGCATTTGTCGTCGAGCACCCTGGCGGCCTTCATGTTCATCTGGGCAGGTTTGGCGATTTACAGCGTCGATGCATGGCTGAACTTGCGCAAACGTAGCTGATCAGAAAACGATCAAAACTCTGCAGGTCATGTAGCGCCTGGCCTGCAGAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/436503‑436353 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cctgcagagTTTTGATCGTTTTCTGATCAGCTACGTTTGCGCAAGTTCAGCCATGCATCGACGCTGTAAATCGCCAAACCTGCCCAGATGAACATGAAGGCCGCCAGGGTGCTCGACGACAAATGCTCGTCGAACAGCACTACGGCCTGCAACAG > NC_002947/436386‑436531 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |