New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	524658 =	73 (0.820)	10 (0.110)	7/244	NT	12.1%	intergenic (+522/‑294)	tyrS/PP_16SC	tyrosine‑‑tRNA ligase/16S ribosomal RNA
	?	NC_002947	697511 =	NA (NA)					intergenic (+435/‑316)	mmsA‑I/PP_16SD	methylmalonate‑semialdehyde dehydrogenase/16S ribosomal RNA

CTTGATTCGATTTGTTAAAGAGCGTTTGGTTAAGAGCTTTTCGTCTCAACCGAGGCGCGCATTCTACGCTTTCCTCAGGGCCTGTCAAGCGTTTATTTTGAAGTTTTCTGCGAGAAACTCGTTTAGCTTCAAACACTTGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/524798‑524658 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cCCGCTACGAGAGATCGCAGCGAGCCAAGTGTTTGAAGCTAAACGAGTTTCTCGCAAAAAACTTCAAAATAAACGCTTGACAGGCTCTGAGGAAAGCGTAGAATGCGCGCCTCGGTTGAGACGAAAAGCTCTTAACCAAACGCTCTTTAA  >  NC_002947/697511‑697659                                                                                                                                                                                                                                                                                                    CTTGATTCGATTTGTTAAAGAGCGTTTGGTTAAGAGCTTTTCGTCTCAACCGAGGCGCGCATTCTACGCTTTCCTCAGAGCCTGTCAAGCGTTTATTTTTAAGTTTTTTGCGAGAAACTCGTTTAGCTTCAAACACTTGGCCCGCTACGA                                                                                                                                              <  2:356187/150‑1              GTTAAAGAGCGTTTGGTTAAGAGCTTTTCGTCTCAACCGAGGCGCGCATTCTACGCTTTCCTCAGAGCCTGTCAAGCGTTTATTTTGAAGTTTTTTGCGAGAAACTCGTTTAGCTTCAAACACTTGGCTCGCTACGAGAGATCGCAGCGA                                                                                                                                 <  1:1113207/150‑1               TTAAAGAGCGTTTGGTTAAGAGCTTTTCGTCTCAACCGAGGCGCGCATTCTACGCTTTCCTCAGGGCCTGTCAAGCGTTTATTTTGAAGTTTTCTGCGAGAAACTCGTTTAGCTTCAAACACTTGGCCCGCTACGAGAGATCGCAGCGAG                                                                                                                                <  1:1702627/150‑1                        tTTTGGTTAAGAGCTTTTCGTCTCAACCGAGGCGCGCATTCTACGCTTTCCTCAGAGCCTGTCAAGCGTTTATTTTGAAGTTTT‑TGCGAGAAACTCGTTTAGCTTCAAACACTTGGCCCGCTACGAGAGATCGCAGCGAGCCAAGTGTTT                                                                                                                      <  2:1779212/149‑1                                       TTTCGTCTCAACCGAGGCGCGCATTCTACGCTTTCCTCAGGGCCTGTCAAGCGTTTATTTTGAAGTTTTCTGCGAGAAACTCGTTTAGCTTCAAACACTTGGCTCGCTACGAGAGATCGCAGCG                                                                                                                                  <  1:2347480/124‑1                                       TTTCGTCTCAACCGAGGCGCGCATTCTACGCTTTCCTCAGGGCCTGTCAAGCGTTTATTTTGAAGTTTTCTGCGAGAAACTCGTTTAGCTTCAAACACTTGGCTCGCTACGAGAGATCGCAGCG                                                                                                                                  >  2:2347480/1‑124                                                                          CTCAGGGCCTGTCAAGCGTTTATTTTGAAGTTTTCTGCGAGAAACTCGTTTAGCTTCAAACACTTGGCCCGCTACGAGAGATCGCAGCGAGCCAAGTGTTTGA                                                                                                                    <  1:1126003/103‑1                                                                          CTCAGGGCCTGTCAAGCGTTTATTTTGAAGTTTTCTGCGAGAAACTCGTTTAGCTTCAAACACTTGGCCCGCTACGAGAGATCGCAGCGAGCCAAGTGTTTGA                                                                                                                    >  2:1126003/1‑103                                                                                 CCTGTCAAGCGTTTATTTTGAAGTTTTCTGCGAGAAACTCGTTTAGCTTCAAACACTTGGCCCGCTACGAGAGATCGCAGCGA                                                                                                                                 <  1:2020952/83‑1                                                                                 CCTGTCAAGCGTTTATTTTGAAGTTTTCTGCGAGAAACTCGTTTAGCTTCAAACACTTGGCCCGCTACGAGAGATCGCAGCGA                                                                                                                                 >  2:2020952/1‑83                                                                                                                                             CCCGCTACGAGAGATCGCAGCGAGCCAAGTGTTTGAAGCTAAACGAGTTTCTCGCAAAAAACTTCAAAATAAACGCTTGACAGGCTCTGAGGAAAGCGTAGAATGCGCGCCTCGGTTGAGACGAAAAGCTCTTAACCAAACGCTCTTTAA  <  1:1915844/150‑1                                                                                                                                             CCCGCTACGAGAGATCGCAGCGAGCCAAGTGTTTGAAGCTAAACGAGTTTCTCGCAAAAAACTTCAAAATAAACGCTTGACAGGCTCTGAGGAAAGCGTAGAATGCGCGCCTCGGTTGAGACGAAAAGCTCTTAACCAAACGCTCTTTAA  <  1:471667/150‑1                                                                                                                                             CCCGCTACGAGAGATCGCAGCGAGCCAAGTGTTTGAAGCTAAACGAGTTTCTCGCAAAAAACTTCAAAATAAACGCTTGACAGGCTCTGAGGAAAGCGTAGAATGCGCGCCTCGGTTGAGACGAAAAGCT                      >  1:909770/1‑130                                                                                                                                             CCCGCTACGAGAGATCGCAGCGAGCCAAGTGTTTGAAGCTAAACGAGTTTCTCGCAAAAAACTTCAAAATAAACGCTTGACAGGCTCTGAGGAAAGCGTAGAATGCGCGCCTCGGTTGAGACGAAAAGCT                      <  2:909770/130‑1                                                                                                                                                                                                                                                                                                    CTTGATTCGATTTGTTAAAGAGCGTTTGGTTAAGAGCTTTTCGTCTCAACCGAGGCGCGCATTCTACGCTTTCCTCAGGGCCTGTCAAGCGTTTATTTTGAAGTTTTCTGCGAGAAACTCGTTTAGCTTCAAACACTTGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/524798‑524658 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cCCGCTACGAGAGATCGCAGCGAGCCAAGTGTTTGAAGCTAAACGAGTTTCTCGCAAAAAACTTCAAAATAAACGCTTGACAGGCTCTGAGGAAAGCGTAGAATGCGCGCCTCGGTTGAGACGAAAAGCTCTTAACCAAACGCTCTTTAA  >  NC_002947/697511‑697659

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.