| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 575435 = | 75 (0.850) | 9 (0.110) | 8/236 | NT | 11.3% | coding (469/3069 nt) | fdoG | formate dehydrogenase‑O major subunit |
| ? | NC_002947 | 575457 = | 69 (0.810) | coding (491/3069 nt) | fdoG | formate dehydrogenase‑O major subunit | |||||
GGGGCAAGACTTGCCACCGTCGGGCCATGTCAGACACGTGCCTGGTTATCGAACCCCAGCATGCCTGTTGCGCGGATGACCTTGTGGGTCAGGTAGCCAGCCTCGCTGGAAGCAGCGGAAGCGGCAAGAAAACCGGTGGTGAGCCAGCGGTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/575586‑575435‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggttTTCTTGCCGCTTCCGCTGCTTCCAGCGAGGCTGGCTACCTGACCCACAAGGTCATCCGCGCAACAGGCATGCTGGGGTTCGATAACCAGGCACGTGTCTGACATGGCCCGACGGTGGCAAGTCTTGCCCCGACGTACGGCCGTGGCGCC > NC_002947/575457‑575605 GGGGCAAGACTTGCCACCGTCGGGCCATGTCAGACACGTGCCTGGTTATCGAACCCCAGCATGCCTGTTGCGCGGATGACCTTGTGGGTCAGGTAGCCAGCCTCGCTGGAAGCAGCGGAAGCGGCAAGAAAACCGGTGGTGAGCCAGCGG > 2:2338942/1‑150GGGGCAAGACTTGCCACCGTCGGGCCATGTCAGACACGTGCCTGGTTATCGAACCCCAGCATGCCTGTTGCGCGGATGACCTTGTGGGTCAGGTAGCCAGCCTCGCTGGAAGCAGCGGAAGCGGCAAGAAAACCGGTGGTGAGCCAGCGG > 1:2261119/1‑150 GGCAATACTTGCCACCGCCGGGCCATGTCAGACACGTGCCTGGTTATCGAACCCCAGCATGCCTGTTGCGCGGATGACCGTGTGGGTCAGGTAGCCAGCCTCGCCGGAAGCAGCCGAAGCGGCAAGAAAACCGGTGGGGGGCCAGCGGTT < 2:889169/150‑1 GGCAAGACTTGCCACCGTCGGGCCATGTCAGACACGTGCCTGGTTATCGAACCCCAGCATGCCTGTTGCGCGGATGACCTTGTGGGTCAGGTAGCCAGCCTCGCTGGAAGCAGCGGAAGCGGCAAGAAAACCGGTGGTGAGCCAGCGGTT < 1:1459548/150‑1 TTGTGGGTCAGGTAGCCAGCCTCGCTGGAAGCAGCGGAAGCGGCAAGAAAACCGGTGGTGAGCCAGCGGT < 1:1183607/70‑1 TTGTGGGTCAGGTAGCCAGCCTCGCTGGAAGCAGCGGAAGCGGCAAGAAAACCGGTGGTGAGCCAGCGGT > 2:1183607/1‑70 AAAACCGGTGGTGAGCCAGCGGTTTTCTTGCCGCTTCCGCTGCTTCCAGCGAGGCTGGCTACCTGACCCACAAGGTC < 1:1853954/77‑1 AAAACCGGTGGTGAGCCAGCGGTTTTCTTGCCGCTTCCGCTGCTTCCAGCGAGGCTGGCTACCTGACCCACAAGGTC > 2:1853954/1‑77 AAACCGGTGGTGAGCCAGCGGTTTTCTTGCCGCTTCCGCTGCTTCCAGCGAGGCTGGCTACCTGACCCACAAGGTCATCCGCGCAACAGGCATGCTGGGGTTCGATAACCAGGCACGTGTCTGA > 1:2249531/1‑124 AAACCGGTGGTGAGCCAGCGGTTTTCTTGCCGCTTCCGCTGCTTCCAGCGAGGCTGGCTACCTGACCCACAAGGTCATCCGCGCAACAGGCATGCTGGGGTTCGATAACCAGGCACGTGTCTGA < 2:2249531/124‑1 AACCGGTGGTGAGCCAGCGGTTTTCTTGCCGCTTCCGCTGCTTCCAGCGAGGCTGGCTACCTGAC > 1:2049407/1‑65 AACCGGTGGTGAGCCAGCGGTTTTCTTGCCGCTTCCGCTGCTTCCAGCGAGGCTGGCTACCTGAC < 2:2049407/65‑1 AACCGGTGGTGAGCCAGCGGTTTTATTGCCGCTTCCGCTGCTTCCAGCGAGACTGGCTACCTGACCCACAAGGTCATCCGCGCAACAGGCATGCTGGGGTTCGATAACCAGGCACGTGTCTGACATGGCCCGACGGTGGCAAGTCTTGCC > 2:1699516/1‑150 CCGGTGGTGAGCCAGCGGTTTTCTTGCCGCTTCCGCTGCTTCCAGCGAGGCTGGCTACCTGACCCACAAGGTCATCCGCGCAACAGGCATGCTGGGGTTCGATAACCAGGCACGTGTCTGACATGGCCCGACGGTGGCAA > 1:2087617/1‑140 CCGGTGGTGAGCCAGCGGTTTTCTTGCCGCTTCCGCTGCTTCCAGCGAGGCTGGCTACCTGACCCACAAGGTCATCCGCGCAACAGGCATGCTGGGGTTCGATAACCAGGCACGTGTCTGACATGGCCCGACGGTGGCAA < 2:2087617/140‑1 CGGTTTTCTTGCCGCTTCCGCTGCTTCCAGCGAGGCTGGCTACCTGACCCACAAGGTCATCCGCGCAACAGGCATGCTGGGGTTCGATAACCAGGCACGTGTCTGACATGGCCCGACGGTGGCAAGTCTTGCCCCGACGTACGGCCGTGG < 1:246906/150‑1 GTTTTCTTGCCGCTTCCGCTGCTTCCAGCGAGGCTGGCTACCTGACCCACAAGGTCATCCGCGCAACAGGCATGCTGGGGTTCGATAACCAGGCACGTGTCTGACATGGCCCGACGGTGGCAAGTCTTGCCCCGACGTACGGCCGTGGCG > 2:2115042/1‑150 GTTTTCTTGCCGCTTCCGCTGCTTCCAGCGAGGCTGGCTACCTGACCCACAAGGTCATCCGCGCAACAGG < 2:192779/70‑1 GTTTTCTTGCCGCTTCCGCTGCTTCCAGCGAGGCTGGCTACCTGACCCACAAGGTCATCCGCGCAACAGG > 1:192779/1‑70 TTTCTTGCCGCTTCCGCTGCTTCCAGCGAGGCTGGCTACCTGACCCACAAGGTCATCCGCGCAACAGGCATGCTGGGGTTCGATAACCAGGCACGTGTCTGACATGGCCCGACGGTGGCAAGTCTTGCCCCGACGTACGGCCGTGGCGCC < 2:393529/150‑1 TTTCTTGCCACTTCCGCTGCTTCCAGCGAGGCTGGCTACCTGACCCACAAGGTCATCCGCGCAACAGGCATGCTGGGGTTCGATAACCAGGCACGTGTCTGACATGGCCCGACGGTGGCAAGTCTTGCCCCGACGTACGGCCTAGGCGCC > 2:744720/1‑150 GGGGCAAGACTTGCCACCGTCGGGCCATGTCAGACACGTGCCTGGTTATCGAACCCCAGCATGCCTGTTGCGCGGATGACCTTGTGGGTCAGGTAGCCAGCCTCGCTGGAAGCAGCGGAAGCGGCAAGAAAACCGGTGGTGAGCCAGCGGTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/575586‑575435‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggttTTCTTGCCGCTTCCGCTGCTTCCAGCGAGGCTGGCTACCTGACCCACAAGGTCATCCGCGCAACAGGCATGCTGGGGTTCGATAACCAGGCACGTGTCTGACATGGCCCGACGGTGGCAAGTCTTGCCCCGACGTACGGCCGTGGCGCC > NC_002947/575457‑575605 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |