| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 673987 = | 83 (0.940) | 6 (0.070) | 6/232 | NT | 7.0% | coding (125/471 nt) | PP_0575 | membrane protein |
| ? | NC_002947 | 674037 = | 82 (0.980) | coding (75/471 nt) | PP_0575 | membrane protein | |||||
GTGTTCAACATTTGGGAAAGGCGACCTGCCAATGCAAAGCATTGTTCTCCTGCTGTGGCTTGCCTTGTGCTCCGAACAGGATGTGCGTCAACGCCAGATATCCAACGTGCTGACCCTGGGGGCGGCTGGCTGCGCCCTGGCCTGGCTGTTCAGCAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/674142‑673987‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcagcacGTTGGATATCTGGCGTTGACGCACATCCTGTTCGGAGCACAAGGCAAGCCACAGCAGGAGAACAATGCTTTGCATTGGCAGGTCGCCTTTCCCAAATGTTGAACACTTCTACCCGGTCAGTCAGGTTTCCTTAAAAGAAGATA > NC_002947/674037‑674179 GTGTTCAACATTTGGGAAAGGCGACCTGCCAATGCAAAGCATTGTTCTCCTGCTGTGGCTTGCCTTGTGCTCCGAACAGGATGTGCGTCAACGCCAGATATCCAACGTGCTGACCCTGGGGGCGGCTGGCTGCGCCCTGGCCTGGCTGTT < 1:1078000/150‑1 GTTCAACATTTGGGAAAGGCGACCTGCCAATGCAAAGCATTGTTCTCCTGCTGTGGCTTGCCTTGTGCTCCGAACAGGATGTGCGTCAACGCCAGATATCCAACGTGCTGACCCTGGGGGCGGCTGGCTGCGCCCTGGCCTGGCTGTTCA < 2:1880034/150‑1 TTCAACATTTGGGAAAGGCGACCTGCCAATGCAAAGCATTGTTCTCCTGCTGTGGCTTGCCTTGTGCTCCGAACAGGATGTGCGTCAACGCCAGATATCCAACGTGCTGACCCTGGGGGCGGCTGGCTGCGCCCTGGCCTGGCTGTTCAG > 1:442496/1‑150 AACATTTGGGAAAGGCGACCTGCCAATGCAAAGCATTGTTCTCCTGCTGTGGCTTGCCTTGTGCTCCGAACAGGATGTGCGTCAACGCCAGATATCCAACGTGCTGACCCTGGGGGCGGCTGGCTGCGCCCTGGCCTGGCTGTTCAGCAC < 2:2222545/150‑1 GCTTGCCTTGTGCTCCGAACAGGATGTGCGTCAACGCCAGATATCCAACGTGCTGACCCTGGGGGCGGCTGGCTGCGCCCTGGCCTGGCTGTTCA < 2:1845770/95‑1 GCTTGCCTTGTGCTCCGAACAGGATGTGCGTCAACGCCAGATATCCAACGTGCTGACCCTGGGGGCGGCTGGCTGCGCCCTGGCCTGGCTGTTCA > 1:1845770/1‑95 TGTGCGTCAACGCCAGATATCCAACGTGCTGACCCTGGGGGCGGCTGGCTGCGCCCTGGCCTGGCTGTTCAGCA > 1:1576063/1‑74 TGTGCGTCAACGCCAGATATCCAACGTGCTGACCCTGGGGGCGGCTGGCTGCGCCCTGGCCTGGCTGTTCAGCA < 2:1576133/74‑1 TGTGCGTCAACGCCAGATATCCAACGTGCTGACCCTGGGGGCGGCTGGCTGCGCCCTGGCCTGGCTGTTCAGCA < 2:1576063/74‑1 TGTGCGTCAACGCCAGATATCCAACGTGCTGACCCTGGGGGCGGCTGGCTGCGCCCTGGCCTGGCTGTTCAGCA > 1:1576133/1‑74 GTCAACGCCAGATATCCAACGTGCTGACCCTGGGGGCGGCTGGCTGCGCCCTGGCCTGGCTGTT > 1:226864/1‑64 GTCAACGCCAGATATCCAACGTGCTGACCCTGGGGGCGGCTGGCTGCGCCCTGGCCTGGCTGTT < 2:226864/64‑1 AACGTGCTGACCCTGGGGGCGGCTGGCTGCGCCCTGGCCTGGCTGTTCAGCACGTTGGATATCTGGCGTTGACGCACATCCTGTTCGGAGCACAAGGCAAGCCACAGCAGGAGAACAATGCTTTGCATTGGCAG > 1:2208347/1‑134 AACGTGCTGACCCTGGGGGCGGCTGGCTGCGCCCTGGCCTGGCTGTTCAGCACGTTGGATATCTGGCGTTGACGCACATCCTGTTCGGAGCACAAGGCAAGCCACAGCAGGAGAACAATGCTTTGCATTGGCAG < 2:2208347/134‑1 ACGTGCTGACCCTGGGGGCGGCTGGCTGCGCCCTGGCCTGGCTGTTCAGCACGTTGGATATCTGGCGTTGACGCACATCCTGTTCGGAGCACAAGGCAAGCCACAGCAGGAGAACAATGCTTTGCATTGGCAGGTCGCCTTTCCCAAATG > 2:1663215/1‑150 TGGCTGCGCCCTGGCCTGGCTGTTCAGCACGTTGGATATCTGGCGTTGACGCACATCCTGTTCGGAGCACAAGGCAAGCCACAGCAGGAGAACAATGCTTTGCATTGGCA < 2:1683888/110‑1 TGGCTGCGCCCTGGCCTGGCTGTTCAGCACGTTGGATATCTGGCGTTGACGCACATCCTGTTCGGAGCACAAGGCAAGCCACAGCAGGAGAACAATGCTTTGCATTGGCA > 1:1683888/1‑110 TGGCTGTTCAGCACGTTGGATATCTGGCGTTGACGCACATCCTGTTCGGAGCACAAGGCAAGCCACAGCAGGAGAACAATGCTTTGCATTGGCAGGTCGCCTTTCCCAAATGTTGAACACTTCTACCCGGTCAGTCAGGTTTCCTTAAAA < 1:1663215/150‑1 TCAGCACGTTGGATATCTGGCGTTGACGCACATCCTGTTCGGAGCACAAGGCAAGCCACAGCAGGAGAACAATGCTTTGCATTGGCAGGTCGCCTTTCCCAAATGTTGAACACTTCTACCCGGTCAGTCAGGTTTCCTTAAAAGAAGATA < 1:1917916/150‑1 GTGTTCAACATTTGGGAAAGGCGACCTGCCAATGCAAAGCATTGTTCTCCTGCTGTGGCTTGCCTTGTGCTCCGAACAGGATGTGCGTCAACGCCAGATATCCAACGTGCTGACCCTGGGGGCGGCTGGCTGCGCCCTGGCCTGGCTGTTCAGCAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/674142‑673987‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcagcacGTTGGATATCTGGCGTTGACGCACATCCTGTTCGGAGCACAAGGCAAGCCACAGCAGGAGAACAATGCTTTGCATTGGCAGGTCGCCTTTCCCAAATGTTGAACACTTCTACCCGGTCAGTCAGGTTTCCTTAAAAGAAGATA > NC_002947/674037‑674179 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |