New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 734332 | 81 (0.910) | 5 (0.060) | 5/224 | NT | 5.8% | coding (988/1296 nt) | ndh | NADH dehydrogenase |
? | NC_002947 | = 734372 | 88 (1.090) | coding (948/1296 nt) | ndh | NADH dehydrogenase |
CGCTGCCCATCAGGTTACCCATCAGGTTGCCCACCGCCGAGAAGCGCGACAGCGACACCAGCGAGCCATAGTCCTTGTACTCGTACGTCGGCAGGGCCTTGTTCTCCAGGCGCGCCTTCAGGCTTTGCGCCAGCATCGAAGCCTGCTGGTGCGCCGCCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/734173‑734332 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgcgccgcctgCCCGCAACCCGGCAGCGATCGTAACGTGCCGCCGCGCGCACAGGCGGCGCACCAGCAGGCTTCGATGCTGGCGCAAAGCCTGAAGGCGCGCCTGGAGAACAAGGCCCTGCCGACGTACGAGTACAAGGACTATGGCTCGCTGGTGTC < NC_002947/734372‑734226 CGCTGCCCATCAGGTTACCCATCAGGTTGCCCACCGCCGAGAAGCGCGACAGCGACACCAGCGAGCCATAGTCCTTGTACTCGTACGTCGGCAGGGCCTTGTTCTCCAGGCGCGCCTTCAGGCTTTGCGCCAGCATCGAAGCCTGCTGGT < 1:5168/150‑1 GCTGCCCATCAGGTTACCCATCAGGTTGCCCACCGCCGAGAAGCGCGACAGCGACACCAGCGAGCCATAGTCCTTGTACTCGTACGTCGGCAGGGCCTTGTTCTCCAGGCGCGCCTTCAGGCTTTGCGCCAGCATCGAAGCCTGCTGGTG > 2:1311984/1‑150 CTGCCCATCAGGTTACCCATCAGGTTGCCCACCGCCGAGAAGCGCGACAGCGACACCAGCGAGCCATAGTCCTTGTACTCGTACGTCGGCAGGGCCTTGTTCTCCAGGCGCGCCTTCAGGCTTTGCGCCAGCATCGAAGCCTGCTGGTGC < 2:1273212/150‑1 CTGCCCATCAGGTTACCAATCAGGTTGACCCCAGACGAGTAGCGCGACAGCGACACCAGCGAGCCATAGTCCTTGTACTCGTACGTCGGCAGGGCCTTGTTCTCCAGGCGCGCCTTCAGGCTTTGCGCCAGCATCGAAGCCTGCTGGTGC < 2:2201446/150‑1 CCATCAGGTTACCCATCAGGTTGCCCACCGCCGAGAAGCGCGACAGCGACACCAGCGAGCCATAGTCCTTGTACTCGTACGTCGGCAGGGCCTTGTTCTCCAGGCGCGCCTTCAGGCTTTGCGCCAGCATCGAAGCCTGCTGGTGCGCCG > 1:2291507/1‑150 CATCAGGTTACCCATCAGGTTGCCCACCGCCGAGAAGCGCGACAGCGACACCAGCGAGCCATAGTCCTTGTACTCGTACGTCGGCAGGGCCTTGTTCTCCAGGCGCGCCTTCAGTCTTTGCGCCAGCATCGAAGCCTGCTGGTGCGCCGC < 1:1509619/150‑1 CATCAGGTTACCCATCAGGTTGCCCACCGCCGAGAAGCGCGACAGCGACACCAGCGAGCCATAGTCCTTGTACTCGTACGTCGGCAGGGCCTTGTTCTCCAGGCGCGCCTTCAGGCTTTGCGCCAGCATCGAAGCCTGCTGGTGCGCCGC < 1:1311984/150‑1 CATCAGGTTACCCATCAGGTTGCCCACCGCCGAGAAGCGCGACAGCGACACCAGCGAGCCATAGTCCTTGTACTCGTACGTCGGCAGGGCCTTGTTCTCCAGGCGCGCCTTCAGGCTTTGCGCCAGCATCGAAGCCTGCTGGTGCGCCGC < 1:108705/150‑1 TCAGGTTACCCATCAGGTTGCCCCCCGCCGAGAAGCGCGACAGCGACACCAGCGAGCCATAGTCCTTGTACTCGTACGTCTGCAGGGCCTTGTTCTCCAGGCGCGCCTTCAGGCTTTGCGCCAGCATCGAAGCCTGCTGGTGCGCCGCCT < 1:391823/150‑1 CAGGTTACCCATCAGGTTGCCCACCGCCGAGAAGCGCGACAGCGACACCAGCGAGCCATAGTCCTTGTACTCGGACGTCGGCAGGGCCTTGTTCTCCAGGCGCGCCTTCAGGCTTTGCGCCAGCATCGAAGCCTGCTGGTGCGCCGCCTG < 1:771711/150‑1 CGACACCAGCGAGCCATAGTCCTTGTACTCGTACGTCGGCAGGGCCTTGTTCTCCAGGCGCGCCTTCAGGCTTTGCGCCAGCATCGAAGCCTGCTGGTGCGCCGCCTGCCCGCAACCCGGCAGCGATCGTAACGTGCCGCCGCGCGCACA < 2:223075/150‑1 GACACCAGCGAGCCATAGTCCTTGTACTCGTACGTCGGCAGGGCCTTGTTCTCCAGGCGCGCCTTCAGGCTTTGCGCCAGCATCGAAGCCTGCTGGTGCGCCGCCTGCCCGCAACCCGGCAGCGATCGTAACGTGCCGCCGCGCGCACAG > 2:1650919/1‑150 ACCAGCGAGCCATAGTCCTTGTACTCGTACGTCGGCAGGGCCTTGTTCTCCAGGCGCGCCTTCAGGCTTTGCGCCAGCATCGAAGCCTGCTGGTGCGCCGCCTGCCCGCAACCCGGCAGCGATCGTAACGTGCCGCCGCGCGCACAGGCG < 1:1650919/150‑1 ATAGTCCTTGTACTCGTACGTCGGCAGGGCCTTGTTCTCCAGGCGCGCCTTCAGGCTTTGCGCCAGCATCGAAGCCTGCTGGT < 2:1893072/83‑1 ATAGTCCTTGTACTCGTACGTCGGCAGGGCCTTGTTCTCCAGGCGCGCCTTCAGGCTTTGCGCCAGCATCGAAGCCTGCTGGT > 1:1893072/1‑83 CTTCAGGCTTTGCGCCAGCATCGAAGCCTGCTGGTGCGCCGCCTGCCCGCAACCCGGCAGCGATCGTAACGTGCCGCC < 2:429306/78‑1 CTTCAGGCTTTGCGCCAGCATCGAAGCCTGCTGGTGCGCCGCCTGCCCGCAACCCGGCAGCGATCGTAACGTGCCGCC > 1:429306/1‑78 TGCGCCGCCTGCCCGCAACCCGGCAGCGATCGTAACGTGCCGCCGCGCGCACAGGCTGCGCACCAGCAGGCTTCGATGCTGGCGCAAAGCCTGAAGGCGCGCCTGGAGAACAAGGCCCTGCCGACGTACGAGTACAAGGACTATGGCTCG > 1:2188274/1‑150 TGCGCCGCCTGCCCGCAACCCGGCAGCGATCGTAACGTGCCGCCGCGCGCACAGGCGGCGCACCAGCAGGCTTCGATGCTGGCGCAAAGCCTGAAGGCGCGCCTGGAGAACAAGGCCCTGCCGACGTACGAGTACAAGGACTATGGCTCG < 1:690401/150‑1 TGCGCCGCCTGCCCGCAACCCGGCAGCGATCGTAACGTGCCGCCGCGCGCACAGGCGGCGCACCAGCAGGCTTCGATGCTGGCGCAAAGCCTGAAGGCGCGCCTGGAGAACAAGGCCCTGCCGACGTACGAGTACAAGGACTATGGCTCG > 1:1520865/1‑150 TGCGCCGCCTGCCCGCAACCCGGCAGCGATCGTAACGTGCCGCCGCGCGCACAGGCGGCGCACCAGCAGGCTTCGATGCTGGCGCAAAGCCTGAAGGCGCGCCT < 1:425362/104‑1 TGCGCCGCCTGCCCGCAACCCGGCAGCGATCGTAACGTGCCGCCGCGCGCACAGGCGGCGCACCAGCAGGCTTCGATGCTGGCGCAAAGCCTGAAGGCGCGCCT > 2:425362/1‑104 GCCGCCTGCCCGCAACCCGGCAGCGATCGTAACGTGCCGCCGCGCGCACAGGCGGCGCACCAGCAGGCTTCGATGCTGGCGCAAAGCCTGAAGGCGCGCCTGGAGAACAAGGCCCTGCCGACGTACGAGTACAAGGACTATGGCTCGCTG > 1:18840/1‑150 GCCGCCTGCCCGCAACCCGGCAGCGATCGTAACGTGCCGCCGCGCGCACAGGCGGCGCACCAGCAGGCTTCGATGCTGGCGCAAAGCCTGAAGGCGCGCCTGGAGAACAAGGCCCTGCCGACGTACGAGTACAAGGACTATGGCTCGCTG < 2:419343/150‑1 CCTGCCCGCAACCCGGCAGCGATCGTAACGTGCCGCCGCGCGCACAGGCGGCGCACCAGCAGGCTTCGATGCTGGCGCAAAGCCTGAAGG > 1:609682/1‑90 CCTGCCCGCAACCCGGCAGCGATCGTAACGTGCCGCCGCGCGCACAGGCGGCGCACCAGCAGGCTTCGATGCTGGCGCAAAGCCTGAAGG < 2:609682/90‑1 CTGCCCGCAACCCGGCAGCGATCGTAACGTGCCGCCGCGCGCACAGGCGGCGCACCAGCAGGCTTCGATGCTGGCGCAAAGCCTGAAGGCGCGCCTGGAGAACAAGGCCCTGCCGACGTACGAGTACAAGGACTATGGCTCGCTGGTGTC < 1:1898973/150‑1 CTGCCCGCAACCCGGCAGCGATCGTAACGTGCCGCCGCGCGCACAGGCGGCGCACCAGCAGGCTTCGATGCTGGCGCAAAGCCTGAAGGCGCGCCTGGAGAACAAGGCCCTGCCGACGTACGAGTACAAGGACTATGGCTCGCTGGTGTC < 2:916786/150‑1 CGCTGCCCATCAGGTTACCCATCAGGTTGCCCACCGCCGAGAAGCGCGACAGCGACACCAGCGAGCCATAGTCCTTGTACTCGTACGTCGGCAGGGCCTTGTTCTCCAGGCGCGCCTTCAGGCTTTGCGCCAGCATCGAAGCCTGCTGGTGCGCCGCCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/734173‑734332 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgcgccgcctgCCCGCAACCCGGCAGCGATCGTAACGTGCCGCCGCGCGCACAGGCGGCGCACCAGCAGGCTTCGATGCTGGCGCAAAGCCTGAAGGCGCGCCTGGAGAACAAGGCCCTGCCGACGTACGAGTACAAGGACTATGGCTCGCTGGTGTC < NC_002947/734372‑734226 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |