New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 742918 =NA (NA)12 (0.140) 8/234 NT NA coding (1016/1422 nt) PP_0635 group II intron‑encoding maturase
?NC_002947 742948 = NA (NA)coding (1046/1422 nt) PP_0635 group II intron‑encoding maturase

CAGTTCCTCAAGCGGCCGCTTGCTCTGGCTGAGCTTGAAGTAGCTAGCCCAGCCTCTCAGGACGGGGTTGATCCGCTCGATGACAGTCGCCATTTTGCGAGCCCGTACGCTGCGCAGCAGCATTCTGAGCCGGTCGCGTAAGCGGTCTAGGCTCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/743072‑742918
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggctcaGAATGCTGCTGCGCAGCGTACGGGCTCGCAAAATGGCGACTGTCATCGAGCGGATCAACCCCGTCCTGAGAGGCTGGGCTAGCTACTTCAAGCTCAGCCAGAGCAAGCGGCCGCTTGAGGAACTGGATGGTTGGGTCAGGCACAAACTC  >  NC_002947/742948‑743096
                                                                                                                                                                                                                                                                                                                
CAGTTCCTCAAGCGGCCGCTTGCTCTGGCTGAGCTTGAAGTAGCTAGCCCAGCCTCTCTGGACGGGGTTGATCCGCTCGATGACAGTCGCCATTTTGCGAGCCCGTACGCTGCGCAGCAGCATTCTGAGCCGGTCGCGTAAGCGGTCTAG                                                                                                                                                            <  1:2120290/150‑1
 atTTCCTCAAGCGGCCGCTTGCTCTGGCTGAGCTTGAAGTAGCTAGCCCAGCCTCTCAGGACGGGGTTGATCCGCTCGATGACAGTCGCCATTTTGCGAGCCCGTACGCTGCGCAGCAGCATTCTGAGCCGGTCGCGTAAGCGGTCTAGG                                                                                                                                                           >  2:1553385/3‑150
 AGTTCCTCAAGCGGCCGCTTGCTCTGGCTGAGCTTGAAGTAGCTAGCCCAGCCTCTCAGGACGGGGTTGATCCGCTCGATGACAGTCGCCATTTTGCGAGCCCGTACGCTGCGCAGCAGCATTCTGAGCCGGTCGCGTAAGCGGTCTAGG                                                                                                                                                           <  1:529805/150‑1
 AGTTCCTCAAGCGGCCGCTTGCTCTGGCTGAGCTTGAAGTAGCTAGCCCAGCCTCTCAGGACGGGGTTGATCCGCTCGATGACAGTCGCCATTTTGCGAGCCCGTACGCTGCGCAGCAGCATTCTGAGCCGGTCGCGTAAGCGGTCTAGG                                                                                                                                                           <  2:910021/150‑1
 AGTTCCTCAAGCGGCCGCTTGCTCTGGCTGAGCTTGAAGTAGCTAGCCCAGCCTCTCAGGACGGGGTTGATCCGCTCGATGACAGTCGCCATTTTGCGAGCCCGTACGCTGCGCAGCAGCATTCTGAGCCGGTCGCGTAAGCGGTCTAGG                                                                                                                                                           >  2:722686/1‑150
 AGTTCCTCAAGCGGCCGCTTGCTCTGGCTGAGCTTGAAGTAGCTAGCCCAGCCTCTCAGGACGGGGTTGATCCGCTCGATGACAGTCGCCATTTTGCGAGCCCGTACGCTGCGCAGCAGCATTCTGAGCCGGTCGCGTAAGCGGTCTAGG                                                                                                                                                           >  2:16742/1‑150
 AGTTCCTCAAGCGGCCGCTTGCTCTGGCTGAGCTTGAAGTAGCTAGCCCAGCCTCTCAGGACGGGGTTGATCCGCTCGATGACAGTCGCCATTTTGCGAGCCCGTACGCTGCGCAGCAGCATTCTGAGCCGGTCGCGTAAGCGGTCTAGG                                                                                                                                                           >  2:1667908/1‑150
 AGTTCCTCAAGCGGCCGCTTGCTCTGGCTGAGCTTGAAGTAGCTAGCCCAGCCTCTCAGGACGGGGTTGATCCGCTCGATGACAGTCGCCATTTTGCGAGCCCGTACGCTGCGCAGCAGCATTCTGAGCCGGTCGCGTAAGCGGTCTAGG                                                                                                                                                           >  2:1299127/1‑150
 AGTTCCTCAAGCGGCCGCTTGCTCTGGCTGAGCTTGAAGTAGCTAGCCCAGCCTCTCAGGACGGGGTTGATCCGCTCGATGACAGTCGCCATTTTGCGAGCCCGTACGCTGCGCAGCAGCATTCTGAGCCGGTCGCGTAAGCGGTCTAGG                                                                                                                                                           <  1:354219/150‑1
 AGTTCCTCAAGCGGCCGCTTGCTCTGGCTGAGCTTGAAGTAGCTAGCCCAGCCTCTCAGGACGGGGTTGATCCGCTCGATGACAGTCGCCATTTTGCGAGCCCGTACGCTGCGCAGCAGCATTCTGAGCCGGTCGCGTAAGCGGTCTAGG                                                                                                                                                           >  1:1774221/1‑150
 AGTTCCTCAAGCGGCCGCTTGCTCTGGCTGAGCTTGAAGTAGCTAGCCCAGCCTCTCAGGACGGGGTTGATCCGCTCGATGACAGTCGCCATTTTGACGGACCTTACGCTGCGCATCAGCATTCTGAGCCGGTCGCGTAAGCGGTCTAGG                                                                                                                                                           >  1:1143165/1‑150
 AGTTCCTCAAGCGGCCGCTTGCTCTGGCTGAGCTTGAAGTAGCTAGCCCAGCCTCTCAGGACGGGATTGATCCACTCGATGACAGTCGCCATTTTGCGAGCCCGTACGCTGCGCAGCAGCATTCTGAGCCGGTCGCGTAAGCGGTCTAGG                                                                                                                                                           >  1:1087837/1‑150
 AGTTCCTCAAGCGCCCGCTTGCTCTGGCTGAGCTTGAAGTAGCTAGCCCAGCCTCTCAGGACGGGGTTGATCCGCTCGATGACAGTCGCCATTTTGCGAGCCCGTACGCTGCGCAGCAGCATTCTGAGCCGGTCGCGTAAGCGGTCTAGG                                                                                                                                                           <  1:1676606/150‑1
  ccagagCAAGCGGCCGCTTGCTCTGGCTGAGCTTGAAGTAGCTAGCCCAGCCTCTCAGGACGGGGTTGATCCGCTCGATGACAGTCGCCATTTTGCGAGCCCGTACGCTGCGCAGCAGCATTCTGAGCCGGTCGCGTAAGCGGTCTAGGC                                                                                                                                                          >  1:2155266/7‑150
  GTTCCTCAAGCGGCCGCTTGCTCTGGCTGAGCTTGAAGTAGCTAGCCCAGCCTCTCAGGACGGGGTTGATCCGCTCGATGACAGTCGCCATTTTGCGAGCCCGTACGCTGCGCAGCAGCATTCTGAGCCGGTCGCGTAAGCGGTCTAGGC                                                                                                                                                          <  1:1014283/150‑1
  GTTCCTCAAGCGGCCGCTTGCTCTGGCTGAGCTTGAAGTAGCTAGCCCAGCCTCTCAGGACGGGGTTGATCCGCTCGATGACAGTCGCCATTTTGCGAGCCCGTACGCTGCGCAGCAGCATTCTGAGCCGGTCGCGTAAGCGGTCTAGGC                                                                                                                                                          <  1:2275871/150‑1
  GTTCCTCAAGCGGCCGCTTGCTCTGGCTGAGCTTGAAGTAGCTAGCCCAGCCTCTCAGGACGGGGTTGATCCGCTCGATGACAGTCGCCATTTTGCGAGCCCGTACGCTGCGCAGCAGCATTCTGAGCCGGTCGCGTAAGCGGTCTAGGC                                                                                                                                                          <  1:1961538/150‑1
  GTTCCTCAAGCGGCCGCTTGCTCTGGCTGAGCTTGAAGTAGCTAGCCCAGCCTCTCAGGACGGGGTTGATCCGCTCGATGACAGTCGCCATTTTGCGAGCCCGTACGCTGCGCAGCAGCATTCTGAGCCGGTCGCGTAAGCGGTCTAGGC                                                                                                                                                          >  2:640133/1‑150
   cagagCAAGCGGCCGCTTGCTCTGGCTGAGCTTGAAGTAGCTAGCCCAGCCTCTCAGGACGGGGTTGATCCGCTCGATGACAGTCGCCATTTTGCGAGCCCGTACGCTGCGCAGCAGCATTCTGAGCCGGTCGCGTAAGCGGTCTAGGCT                                                                                                                                                         >  2:2006310/6‑150
   TTCCTCAAGCGGCCGCTTGCTCTGGCTGAGCTTGAAGTAGCTAGCCCAGCCTCTCAGGACGGGGTTGATCCGCTCGATGACAGTCGCCATTTTGCGAGCCCGTACGCTGCGCAGCAGCATTCTGAGCCGGTCGCGTAAGCGGTCTAGGCT                                                                                                                                                         >  1:1206193/1‑150
   TTCCTCAAGCGGCCGCTTGCTCTGGCTGAGCTTGAAGTAGCTAGCCCAGCCTCTCAGGACGGGGTTGATCCGCTCGATGACAGTCGCCATTTTGCGAGCCCGTACGCTGCGCAGCAGCATTCTGAGCCGGTCGCGTAAGCGGTCTAGGCT                                                                                                                                                         >  1:1930572/1‑150
    aagcCAAGCGGCCGCTTGCTCTGGCTGAGCTTGAAGTAGCTAGCCCAGCCTCTCAGGACGGGGTTGATCCGCTCGATGACAGTCGCCATTTTGCGAGCCCGTACGCTGCGCAGCAGCATTCTGAGCCGGTCGCGTAAGCGGTCTAGGCTC                                                                                                                                                        >  2:2044161/5‑150
    aagcCAAGCGGCCGCTTGCTCTGGCTGAGCTTGAAGTAGCTAGCCCAGCCTCTCAGGACGGGGTTGATCCGCTCGATGACAGTCGCCATTTTGCGAGCCCGTACGCTGCGCAGCAGCATTCTGAGCCGGTCGCGTAAGCGGTCTAGGCTC                                                                                                                                                        >  2:651925/5‑150
     CCTCAAGCGGCCGCTTGCTCTGGCTGAGCTTGAAGTAGCTAGCCCAGCCTCTCAGGACGGGGTTGATCCGCTCGATGACAGTCGCCATTTTGCGCGCCCGTACGCTGCGCAGCAGCATTCTGAGCCGGTCGCGTAAGCGGTCTAGGCTCA                                                                                                                                                       <  1:112256/150‑1
     CCTCAAGCGGCCGCTTGCTCTGGCTGAGCTTGAAGTAGCTAGCCCAGCCTCTCAGGACGGGGTTGATCCGCTCGATGACAGTCGCCATTTTGCGAGCCCGTACGCTGCGCAGCAGCATTCTGAGCCGGTCGCGTAAGCGGTCTAGGCTCA                                                                                                                                                       <  2:1995964/150‑1
       TCAAGCGGCCGCTTGCTCTGGCTGAGCTTGAAGTAGCTAGCCCAGCCTCTCAGGACGGGGTTGATCCGCTCGATGACAGTCGCCATTTTGCGAGCCCGTACGCTGCGCAGCAGCATTCTGAGCCGGTCGCGTAAGCGGTCTAGGCTC                                                                                                                                                        <  1:156115/147‑1
       TCAAGCGGCCGCTTGCTCTGGCTGAGCTTGAAGTAGCTAGCCCAGCCTCTCAGGACGGGGTTGATCCGCTCGATGACAGTCGCCATTTTGCGAGCCCGTACGCTGCGCAGCAGCATTCTGAGCCGGTCGCGTAAGCGGTCTAGGCTC                                                                                                                                                        >  2:156115/1‑147
                   TTGCTCTGGCTGAGCTTGAAGTAGCTAGCCCAGCCTCTCAGGACGGGGTTGATCCGCTCGATGACAGTCGCCATTTTGCGAGCCCGTACGCTGCGCAGCAGCATTCTGAGCCGGTCGCGTAAGCGGTCTAGGCTCAGcctt                                                                                                                                                  >  1:498186/1‑137
                             TGAGCTTGAAGTAGCTAGCCCAGCCTCTCAGGACGGGGTTGATCCGCTCGATGACAGTCGCCATTTTGCGAGCCCGTACGCTGCGCAGCAGCATTCTGAGCCTGTCGCGTAAGCGGTCTAG                                                                                                                                                            <  1:733527/121‑1
                             TGAGCTTGAAGTAGCTAGCCCAGCCTCTCAGGACGGGGTTGATCCGCTCGATGACAGTCGCCATTTTGCGAGCCCGTACGCTGCGCAGCAGCATTCTGAGCCTGTCGCGTAAGCGGTCTAG                                                                                                                                                            >  2:733527/1‑121
                             TGAGCTTGAAGTAGCTAGCCCAGCCTCTCAGGACGGGGTTGATCCGCTCGATGACAGTCGCCATTTTGCGAGCCCGTACGCTGCGCAGCAGCATTCTGAGCCGGTCGCGTAAGCGGTCTAGGC                                                                                                                                                          <  2:1011346/123‑1
                             TGAGCTTGAAGTAGCTAGCCCAGCCTCTCAGGACGGGGTTGATCCGCTCGATGACAGTCGCCATTTTGCGAGCCCGTACGCTGCGCAGCAGCATTCTGAGCCGGTCGCGTAAGCGGTCTAGGC                                                                                                                                                          >  1:1011346/1‑123
                             TGAGCTTGAAGTAGCTAGCCCAGCCTCTCAGGACGGGGTTGATCCGCTCGATGACAGTCGCCATTTTGCGAGCCCGTACGCTGCGCAGCAGCATTCTGAGCCGGTCGCGTAAGCGGTCTAGG                                                                                                                                                           <  2:2226554/122‑1
                             TGAGCTTGAAGTAGCTAGCCCAGCCTCTCAGGACGGGGTTGATCCGCTCGATGACAGTCGCCATTTTGCGAGCCCGTACGCTGCGCAGCAGCATTCTGAGCCGGTCGCGTAAGCGGTCTAGG                                                                                                                                                           >  1:2226554/1‑122
                                 CTTGAAGTAGCTAGCCCAGCCTCTCAGGACGGGGTTGATCCGCTCGATGACAGTCGCCATTTTGCGAGCCCGTACGCTGCGCAGCAGCATTCTGAGCCGGTCGCGTAAGCGGTCTAGGC                                                                                                                                                          <  2:1460942/119‑1
                                 CTTGAAGTAGCTAGCCCAGCCTCTCAGGACGGGGTTGATCCGCTCGATGACAGTCGCCATTTTGCGAGCCCGTACGCTGCGCAGCAGCATTCTGAGCCGGTCGCGTAAGCGGTCTAGGC                                                                                                                                                          >  1:1460942/1‑119
                                                CCAGCCTCTCAGGACGGGGTTGATCCGCTCGATGACAGTCGCCATTTTGCGAGCCCGTACGCTGCGCAGCAGCATTCTGAGCCGGTCGCGTAAGCGGTCTAGGCTC                                                                                                                                                        <  2:243827/106‑1
                                                CCAGCCTCTCAGGACGGGGTTGATCCGCTCGATGACAGTCGCCATTTTGCGAGCCCGTACGCTGCGCAGCAGCATTCTGAGCCGGTCGCGTAAGCGGTCTAGGCTC                                                                                                                                                        >  1:243827/1‑106
                                                    CCTCTCAGGACGGGGTTGATCCGCTCGATGACAGTCGCCATTTTGCGAGCCCGTACGCTGCGCAGCAGCATTCTGAGCCGGTCGCGTAAGCGGTCTAG                                                                                                                                                            >  2:1212087/1‑98
                                                    CCTCTCAGGACGGGGTTGATCCGCTCGATGACAGTCGCCATTTTGCGAGCCCGTACGCTGCGCAGCAGCATTCTGAGCCGGTCGCGTAAGCGGTCTAG                                                                                                                                                            <  1:1212087/98‑1
                                                      TCTCAGGACGGGGTTGATCCGCTCGGTGACAGTCGCCATTTTGCGAGCCCGTACGCTGCGCAGCAGCATTCTGAGCCGGTCGCGTAAGCGGTCTAG                                                                                                                                                            <  2:663075/96‑1
                                                      TCTCAGGACGGGGTTGATCCGCTCGGTGACAGTCGCCATTTTGCGAGCCCGTACGCTGCGCAGCAGCATTCTGAGCCGGTCGCGTAAGCGGTCTAG                                                                                                                                                            >  1:663075/1‑96
                                                      TCTCAGGACGGGGTTGATCCGCTCGATGACAGTCGCCATTTTGCGAGCCCGTACGCTGCGCAGCAGCATTCTGAGCCGGTCGCGTAAGCGGTCTAGG                                                                                                                                                           <  2:669473/97‑1
                                                      TCTCAGGACGGGGTTGATCCGCTCGATGACAGTCGCCATTTTGCGAGCCCGTACGCTGCGCAGCAGCATTCTGAGCCGGTCGCGTAAGCGGTCTAGG                                                                                                                                                           >  1:669473/1‑97
                                                                          GCTCGATGACAGTCGCCATTTTGCGAGCCCGTACGCTGCGCAGCAGCATTCTGAGCCGGTCGCGTAAGCGGTCTAGG                                                                                                                                                           >  1:2042967/1‑77
                                                                          GCTCGATGACAGTCGCCATTTTGCGAGCCCGTACGCTGCGCAGCAGCATTCTGAGCCGGTCGCGTAAGCGGTCTAGG                                                                                                                                                           <  2:2042967/77‑1
                                                                                                                   AGCAGCATTCTGAGCCGGTCGCGTAAGCGGTCTAGGCTCAGAATGCTGCTGCGCAGCGTACGGGCTCGCAAAATGGCGACTGTCATCGAGCGGATCAACCCCGTCCTGAGAGGCTGGGCTAGCTACTTCAAGCTCAGCCAGAGCAAGCGG                                         >  1:1597444/1‑150
                                                                                                                      AGCATTCTGAGCCGGTCGCGTAAGCGGTCTAGGCTCAGAATGCTGCTGCGCAGCGTACGGGCTCGCAAAATGGCGACTGTCATCGAGCGGATCAACCCCGTCCTGAGAGGCTGGGCTAGCTACTTCAAGCTCAGCCAGAGCAAGCGGCCG                                      >  2:1988480/1‑150
                                                                                                                        CATTCTGAGCCGGTCGCGTAAGCGGTCTAGGCTCAGAATGCTGCTGCGCAGCGTACGGGCTCGCAAAATGGCGACTGTCATCGAGCGGATCAACCCCGTCCTGAGAGGCTGGGCTAGCTACTTCAAGCTCAGCCAGAGCAAGCGGCCGCT                                    >  2:1314455/1‑150
                                                                                                                         ATTCTGAGCCGGTCGCGTAAGCGGTCTAGGCTCAGAATGCTGCTGCGCAGCGTACGGGCTCGCAAAATGGCGACTGTCATCGAGCGGATCAACCCCGTCCTGAGAGGCTGGGCTAGCTACTTCAAGCTCAGCCAGAGCAAGCGGCCGCTT                                   >  1:1065182/1‑150
                                                                                                                         ATTCTGAGCCGGTCGCGTAAGCGGTCTAGGCTCAGAATGCTGCTGCGCAGCGTACGGGCTCGCAAAATGGCGACTGTCATCGAGCGGATCAACCCCGTCCTGAGAGGCTGGGCTAGCTACTTCAAGCTCAGCCAGAGCAAGCGGCCGCTT                                   >  1:1007083/1‑150
                                                                                                                         ATTCTGAGCCGGTCGCGTAAGCGGTCTAGGCTCAGAATGCTGCTGCGCAGCGTACGGGCTCGCAAAATGGCGACTGTCATCGAGCGGATCAACCCCGTCCTGAGAGGCTGGGCTAGCTACTTCAAGCTCA                                                       >  1:667190/1‑130
                                                                                                                         ATTCTGAGCCGGTCGCGTAAGCGGTCTAGGCTCAGAATGCTGCTGCGCAGCGTACGGGCTCGCAAAATGGCGACTGTCATCGAGCGGATCAACCCCGTCCTGAGAGGCTGGGCTAGCTACTTCAAGCTCA                                                       <  2:667190/130‑1
                                                                                                                          TTCTGAGCCGGTCGCGTAAGCGGTCTAGGCTCAGAATGCTGCTGCGGAGCGTACGGGCTCGCAAAATGGCGACTGTCATCGAGCGGACCAACACGGCCCGGAGAGGGTGGGCTAGCTACTTCACGCTCAGCCAGGGGAAGCGGCGGCTTG                                  >  2:432805/1‑150
                                                                                                                          TTCTGAGCCGGTCGCGTAAGCGGTCTAGGCTCAGAATGCTGCTGCGCAGCGTACGGGCTCGCAAAATGGCGACTGTCATCGAGCGGATCAACCCCGTCCTGAGAGGCTGGGCTAGCTACTTCAAGCTCAGCCAGAGCAAGCGGCCGCTTG                                  >  1:941422/1‑150
                                                                                                                          TTCTGAGCCGGTCGCGTAAGCGGTCTAGGCTCAGAATGCTGCTGCGCAGCGTACGGGCTCGCAAAATGGCGACTGTCATCGAGCGGATCAACCCCGTCCTGAGAGGCTGGGCTAGCTACGGCAAGCCCAGCCAGTGCAAGCGGCCGCTTG                                  >  2:507958/1‑150
                                                                                                                            CTGAGCCGGTCGCGTAAGCGGTCTAGGCTCAGAATGCTGCTGCGCAGCGTACGGGCTCGCAAAATGGCGACTGTCATCGAGCGGATCAACCCCGTCCTGAGAGGCTGGGCTAGCTACTTCAAGCTCAGCCAGAGCAAGCG                                          >  2:789416/1‑140
                                                                                                                            CTGAGCCGGTCGCGTAAGCGGTCTAGGCTCAGAATGCTGCTGCGCAGCGTACGGGCTCGCAAAATGGCGACTGTCATCGAGCGGATCAACCCCGCCCTGAGAGGCTGGGCTAGCTACTTCAAGCTCAGCCAGAGCAAGCG                                          <  1:789416/140‑1
                                                                                                                                                   cctGCTCACAATGCTGCTGCGCAGCGTACGGGCTCGCAAAATGGCGACTGTCATCGAGCGGATCAACCCCGTCCTGAGAGGCTGGGCTAGCTACTTCAAGCTCAGCCAGAGCAAGCGGCCGCTTGAGGAACTGGATGGTTGGGTCAGGCA         <  1:2094876/147‑1
                                                                                                                                                   TAGGCTCAGAATGCTGCTGCGCAGCGTACGGGCTCGTAAAATGGCGACTGTCATCGAGCGGATCAACCCCGTCCTGAGAGGCTGGGCTAGCATCTTCAAGCTCAGCCAGAGCAAGCGGCCGCTTGCGGAACTGGATGGTTGGGTCAGGCA         <  1:432805/150‑1
                                                                                                                                                     GGCTCAGAATGCTGCTGCGCAGCGTACGGGCTCGCAAAATGGCGACTGTCATCGAGCGGATCAACCCCGTCCTGAGAGGCTGGGCTAGCTACTTCAAGCTCAGCCAGAGCAAGCGGCCGCTTGAGGAACT                           >  2:2222159/1‑130
                                                                                                                                                     GGCTCAGAATGCTGCTGCGCAGCGTACGGGCTCGCAAAATGGCGACTGTCATCGAGCGGATCAACCCCGTCCTGAGAGGCTGGGCTAGCTACTTCAAGCTCAGCCAGAGCAAGCGGCCGCTTGAGGAACT                           <  1:2222159/130‑1
                                                                                                                                                      GCTCAGAATGCTGCTGCGCAGCGTACGGGCTCGCAAAATGGCGACTGTCATCGAGCGGATCAACCCCGTCCTGAGAGGCTGGGCTAGCTACTTCAAGCTCAGCCAGAGCAAGCGGCCGCTTGAGGAACTGGATGGTTGGGTCAGGCACAA      >  2:152206/1‑150
                                                                                                                                                       CTCAGAATGCTGCTGCGCAGCGTACGGGCTCGCAAAATGGCGACTGTCATCGAGCGGATCAACCCCGTCCTGAGAGGCTGGTCTAGCTACTTCAAGCTCAGCCAGAGCAAGCGGCCGCTTGAGGAACTGGAT                       >  2:1891301/1‑132
                                                                                                                                                       CTCAGAATGCTGCTGCGCAGCGTACGGGCTCGCAAAATGGCGACTGTCATCGAGCGGATCAACCCCGTCCTGAGAGGCTGGGCTAGCTACTTCAAGCTCAGCCAGAGCAAGCGGCCGCTTGAGGAACTGGATGGTTGGGTCAGGCAacaa     >  1:846444/1‑146
                                                                                                                                                       CTCAGAATGCTGCTGCGCAGCGTACGGGCTCGCAAAATGGCGACTGTCATCGAGCGGATCAACCCCGTCCTGAGAGGCTGGGCTAGCTACTTCAAGCTCAGCCAGAGCAAGCGGCCGCTTGAGGAACTGGATGGTTGGGTCAGGCACAAA     <  1:1580831/150‑1
                                                                                                                                                       CTCAGAATGCTGCTGCGCAGCGTACGGGCTCGCAAAATGGCGACTGTCATCGAGCGGATCAACCCCGTCCTGAGAGGCTGGGCTAGCTACTTCAAGCTCAGCCAGAGCAAGCGGCCGCTTGAGGAACTGGATGGTTGGGTCAGGCACAAA     <  1:1580715/150‑1
                                                                                                                                                       CTCAGAATGCTGCTGCGCAGCGTACGGGCTCGCAAAATGGCGACTGTCATCGAGCGGATCAACCCCGTCCTGAGAGGCTGGGCTAGCTACTTCAAGCTCAGCCAGAGCAAGCGGCCGCTTGAGGAACTGGATGGTTGGGTCAGGCACAAA     <  1:184172/150‑1
                                                                                                                                                       CTCAGAATGCTGCTGCGCAGCGTACGGGCTCGCAAAATGGCGACTGTCATCGAGCGGATCAACCCCGTCCTGAGAGGCTGGGCTAGCTACTTCAAGCTCAGCCAGAGCAAGCGGCCGCTTGAGGAACTGGAT                       <  1:1891301/132‑1
                                                                                                                                                       CTCAGAATGCTGCTGCGCAGCGTACGGGCTCGCAAAATGGCGACTGTCATCGAGCGGATCAACCCCGTCCTGAGAGGCTGGGCTAGCT                                                                   >  2:2113466/1‑88
                                                                                                                                                       CTCAGAATGCTGCTGCGCAGCGTACGGGCTCGCAAAATGGCGACTGTCATCGAGCGGATCAACCCCGTCCTGAGAGGCTGGGCTAGCT                                                                   <  1:2113466/88‑1
                                                                                                                                                       CTCAGAATGCTGCTGCGCAGCGTACGGGCTCGCAAAATGGCGACTGTCATCGAGCGGATCAACCCCGTCCTGAGAGGCTGGGCTAGC                                                                    <  1:288225/87‑1
                                                                                                                                                       CTCAGAATGCTGCTGCGCAGCGTACGGGCTCGCAAAATGGCGACTGTCATCGAGCGGATCAACCCCGTCCTGAGAGGCTGGGCTAGC                                                                    >  2:288225/1‑87
                                                                                                                                                       CTCAGAATGCTGCTGCGCAGCGTACGGGCTCGCAAAATGGCGACTGTCATCGAGC                                                                                                    <  2:1002765/55‑1
                                                                                                                                                       CTCAGAATGCTGCTGCGCAGCGTACGGGCTCGCAAAATGGCGACTGTCATCGAGC                                                                                                    >  1:1002765/1‑55
                                                                                                                                                       CTCAGAATGCTGCTGCGCAGCGTACGGGCTCGCAAAATGG                                                                                                                   >  2:1169089/1‑40
                                                                                                                                                       CTCAGAATGCTGCTGCGCAGCGTACGGGCTCGCAAAATGG                                                                                                                   <  1:1169089/40‑1
                                                                                                                                                        TCAGAATGCTGCTGCGCAGCGTACGGTCTCGCAAAATGGCGACTGTCATCGAGCGGATCAACCCCGTCCTGAGAGGCTGGGCTAGCTACTTCAAGCTCAGCCAGAG                                                <  2:1983291/106‑1
                                                                                                                                                        TCAGAATGCTGCTGCGCAGCGTACGGTCTCGCAAAATGGCGACTGTCATCGAGCGGATCAACCCCGTCCTGAGAGGCTGGGCTAGCTACTTCAAGCTCAGCCAGAG                                                >  1:1983291/1‑106
                                                                                                                                                        TCAGAATGCTGCTGCGCAGCGTACGGGCTCGCAAAATGGCGACTGTCATCGAGCGGATCAACCCCGTCCTGAGAGGCTGGGCTAGCTACTTCAAGCTCAGCCAGAGCAAGCGGCCGCTTGAGGAACTGGATGGTTGGGTCAGGCACAAAC    >  2:1839403/1‑150
                                                                                                                                                        TCAGAATGCTGCTGCGCAGCGTACGGGCTCGCAAAATGGCGACTGTCATCGAGCGGATCAACCCCGTCCTGAGAGGCTGGGCTAGCTACTTCAAGCTCAGCCAGAGCAAGCGGCCGCTTGAGGAACTGGATGGTTGGGTCAGGCACAAAC    >  1:1323195/1‑150
                                                                                                                                                        TCAGAATGCTGCTGCGCAGCGTACGGGCTCGCAAAATGGCGACTGTCATCGAGCGGATCAACCCCGTCCTGAGAGGCTGGGCTAGCTACTTCAAGCTCAGCCAGAGCAAGCGGCCGCTTGAGGAACTGGATGGTTGGGTCAGGCACAAAC    >  1:1528524/1‑150
                                                                                                                                                        TCAGAATGCTGCTGCGCAGCGTACGGGCTCGCAAAATGGCGACTGTCATCGAGCGGATCAACCCCGTCCTGAGAGGCTGGGCTAGCTACTTCAAGCTCAGCCAGAGCAAGCGGCCGCTTGAGGAACTGGATGGTTGGGTCAGGCACAAAC    >  1:1656367/1‑150
                                                                                                                                                        TCAGAATGCTGCTGCGCAGCGTACGGGCTCGCAAAATGGCGACTGTCATCGAGCGGATCAACCCCGTCCTGAGAGGCTGGGCTAGCTACTTCAAGCTCAGCCAGAGCAAGCGGCCGCTTGAGGAACTGGATGGTTGGGTCAGGCACAAAC    >  1:235121/1‑150
                                                                                                                                                        TCAGAATGCTGCTGCGCAGCGTACGGGCTCGCAAAATGGCGACTGTCATCGAGCGGATCAACCCCGTCCTGAGAGGCTGGGCTAGCTACTTCAAGCTCAGCCAGAGCAAGCGGCCGCTTGAGGAACTGGATGGTTGGGTCAGGCACAAAC    <  1:231631/150‑1
                                                                                                                                                        TCAGAATGCTGCTGCGCAGCGTACGGGCTCGCAAAATGGCGACTGTCATCGAGCGGATCAACCCCGTCCTGAGAGGCTGGGCTAGCTACTTCAAGCTCAGCCAGAGCAAGCGGCCGCTTGAGGAACTGGATGGTTGGGTCAGGCACAAAC    <  1:189914/150‑1
                                                                                                                                                        TCAGAATGCTGCTGCGCAGCGTACGGGCTCGCAAAATGGCGACTGTCATCGAGCGGATCAACCCCGTCCTGAGAGGCTGGGCTAGCTACTTCAAGCTCAGCCAGAGCAAGCGGCCGCTTGAGGAACT                           <  2:1057822/127‑1
                                                                                                                                                        TCAGAATGCTGCTGCGCAGCGTACGGGCTCGCAAAATGGCGACTGTCATCGAGCGGATCAACCCCGTCCTGAGAGGCTGGGCTAGCTACTTCAAGCTCAGCCAGAGCAAGCGGCCGCTTGAGGAACT                           >  1:1057822/1‑127
                                                                                                                                                        TCAGAATGCTGCTGCGCAGCGTACGGGCTCGCAAAATGGCGACTGTCATCGAGCGGATCAACCCCGTCCTGAGAGGCTGGGCTAGCTACTTCAAGCTCAGCCAGAGCAAGC                                           >  2:497464/1‑111
                                                                                                                                                        TCAGAATGCTGCTGCGCAGCGTACGGGCTCGCAAAATGGCGACTGTCATCGAGCGGATCAACCCCGTCCTGAGAGGCTGGGCTAGCTACTTCAAGCTCAGCCAGAGCAAGC                                           <  1:497464/111‑1
                                                                                                                                                        TCAGAATGCTGCTGCGCAGCGTACGGGCTCGCAAAATGGCGACTGTCATCGAGCGGATCAACCCCGTCCTGAGAGGCTGG                                                                          >  1:1739165/1‑80
                                                                                                                                                        TCAGAATGCTGCTGCGCAGCGTACGGGCTCGCAAAATGGCGACTGTCATCGAGCGGATCAACCCCGTCCTGAGAGGCTGG                                                                          <  2:1739165/80‑1
                                                                                                                                                          AGAATGCTGCTGCGCAGCGTACGGGCTCGCAAAATGGCGACTGTCATCGAGCGGATCAACCCCGTCCTGAGAGGCTGGGCTAGCTACTTCAAGCTCAGCCAGAGCAAGCGGCCGCTTGAGGAACTGGATGGTTGGGTCAGGCACAAACTC  >  1:2284493/1‑150
                                                                                                                                                          AGAATGCTGCTGCGCAGCGTACGGGCTCGCAAAATGGCGACTGTCATCGAGCGGATCAA                                                                                             >  1:367868/1‑59
                                                                                                                                                          AGAATGCTGCTGCGCAGCGTACGGGCTCGCAAAATGGCGACTGTCATCGAGCGGATCAA                                                                                             <  2:367868/59‑1
                                                                                                                                                                                                                                                                                                                
CAGTTCCTCAAGCGGCCGCTTGCTCTGGCTGAGCTTGAAGTAGCTAGCCCAGCCTCTCAGGACGGGGTTGATCCGCTCGATGACAGTCGCCATTTTGCGAGCCCGTACGCTGCGCAGCAGCATTCTGAGCCGGTCGCGTAAGCGGTCTAGGCTCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/743072‑742918
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggctcaGAATGCTGCTGCGCAGCGTACGGGCTCGCAAAATGGCGACTGTCATCGAGCGGATCAACCCCGTCCTGAGAGGCTGGGCTAGCTACTTCAAGCTCAGCCAGAGCAAGCGGCCGCTTGAGGAACTGGATGGTTGGGTCAGGCACAAACTC  >  NC_002947/742948‑743096

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.