| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 800011 = | 110 (1.240) | 6 (0.070) | 6/234 | NT | 5.5% | coding (465/969 nt) | ispB | octaprenyl diphosphate synthase |
| ? | NC_002947 | 800027 = | 103 (1.220) | coding (449/969 nt) | ispB | octaprenyl diphosphate synthase | |||||
TTCGCGCTCGTTCGAAATGATGGTCGAGCTGGGCTCGATGCCGGTCATGCAGATCCTGTCCAAGGCCACCCGGGTGATTGCCGAAGGTGAAGTGCTGCAACTGTCGCGCGTACGCGAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/800128‑800011‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcgacAGTTGCAGCACTTCACCTTCGGCAATCACCCGGGTGGCCTTGGACAGGATCTGCATGACCGGCATCGAGCCCAGCTCGACCATCATTTCGAACGAGCGCGAATAAAGGAAGTCGCCCACCAGTACGCTCGGCGCGTTGCCCCACAGG > NC_002947/800027‑800173 TTCGCGCTCGTTCGAAATGATGGTCGAGCTGGGCTCGATGCCGGTCATGCAGATCCTGTCCAAGGCCACCCGGGTGATTGCCGAAGGTGAAGTGCTGCAACTGTCGCGCGTACGC < 1:454880/115‑1TTCGCGCTCGTTCGAAATGATGGTCGAGCTGGGCTCGATGCCGGTCATGCAGATCCTGTCCAAGGCCACCCGGGTGATTGCCGAAGGTGAAGTGCTGCAACTGTCGCGCGTACGC > 2:454880/1‑115 GAAATGATGGTCGAGCTGGGCTCGATGCCGGTCATGCAGATCCTGTCCAAGGCCACCCGGGTGATTGCCGAAGGTGAAGTGCTGCAACTGTCGCGTACGCGCGACAGTTGCAGCACTTCACCTTC < 1:704058/125‑1 GAAATGATGGTCGAGCTGGGCTCGATGCCGGTCATGCAGATCCTGTCCAAGGCCACCCGGGTGATTGCCGAAGGTGAAGTGCTGCAACTGTCGCGTACGCGCGACAGTTGCAGCACTTCACCTTC > 2:704058/1‑125 TGCTGCAACTGTCGCGCGTACGCGAC‑G‑‑CCAGCAATTCACCTTCGGCAATCACCCGGGTGGCCTTGGACAGGATCTGCATGACCGGCATCGAGCCCAGCTCGACCATCATTTCGAACGAGCGCGAATAAAGGAAGTCGCCCACCAGTACGC > 1:975169/1‑150 ACTGTCGCGCGTACGCGACAGTTGCAGCACTTCACCTTCGGCAATCACCCGGGTGGCCTTGGACAGGATCTGCATGACCGGCATCGAGCCCAGCTCGACCATCATTTCGAACGAGCGCGAATAAAGGAAGTCGCCCACCAGTACGCTCGG > 1:1400791/1‑150 CTGTCGCGCGTACGCGACAGTTGCAGCACTTCACCTTCGGCAATCACCCGGGTGGCCTTG < 1:2055775/60‑1 CTGTCGCGCGTACGCGACAGTTGCAGCACTTCACCTTCGGCAATCACCCGGGTGGCCTTG > 2:2055775/1‑60 GCGACAGTTGCAGCACTTCACCTTCGGCAATCACCCGGGTGGCCTTGGACAGGATCTGCATGACCGGCATCGAGCCCAGCTCGACCATCATTTCGAACGAGCACGAATAAAGGAAGTCGCCCACCAGTACGCTCGGCGCGTTGCCCCACA > 2:344697/1‑150 CGACAGTTGCAGCATTTCACCTTCGGCAATCACCCGGGTGGCCTTGGACAGGATCTGCATGACCGGCATCGAGCCCAGCTCGACCATCATTTCGAACGAGCGCCAATAAAGGAAGTCGCCCACCAGTACGCTCGGCGCGTTGCCCCACAG < 1:1162259/150‑1 GACAGTTGCAGCACTTCACCTTCGGCAATCACCCGGGTGGCCTTGGACCGGATCTGCATGACCGGCATCGAGCCCAGCTCGACCATCATTTCGAACGAGCGCGAATAAAGGAAGTCGCCCACCAGTACGCTCGGCGCGTTGCCCCACAGG < 2:1614541/150‑1 GACAGTTGCAGCACTTCACCTTCGGCAATCACCCGGGTGGCCTTGGACAGGATCTGCATGACCGGCATCGAGCCCAGCTCGACCATCATTTCGAACGAGCGCGAATAAAGGAAGTCGCCCACCAGTACGCTCGGCGCGTTGCCCCACAGG < 1:2113660/150‑1 TTCGCGCTCGTTCGAAATGATGGTCGAGCTGGGCTCGATGCCGGTCATGCAGATCCTGTCCAAGGCCACCCGGGTGATTGCCGAAGGTGAAGTGCTGCAACTGTCGCGCGTACGCGAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/800128‑800011‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcgacAGTTGCAGCACTTCACCTTCGGCAATCACCCGGGTGGCCTTGGACAGGATCTGCATGACCGGCATCGAGCCCAGCTCGACCATCATTTCGAACGAGCGCGAATAAAGGAAGTCGCCCACCAGTACGCTCGGCGCGTTGCCCCACAGG > NC_002947/800027‑800173 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |