| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 914210 = | 99 (1.120) | 6 (0.070) | 6/234 | NT | 6.1% | coding (918/1743 nt) | fruA | PTS fructose transporter subunit IIBC |
| ? | NC_002947 | 914248 = | 90 (1.070) | coding (956/1743 nt) | fruA | PTS fructose transporter subunit IIBC | |||||
CTCCAGGCTGCTGGGCAAGCGCGCCCATCGGGCAATGGCCTTGGCGCTGTAACCGGCGAGGAAACCGGCGACAATGCCACCGATGAAGCCGGCCCCCAAGGTGCTGGCCAACAGGCCGCCGATCATGCCCGGGGCCAGCCCGGGGC‑‑GGTCGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/914363‑914210‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcggcgGCCTGTTGGCCAGCACCTTGGGGGCCGGCTTCATCGGTGGCATTGTCGCCGGTTTCCTCGCCGGTTACAGCGCCAAGGCCATTGCCCGATGGGCGCGCTTGCCCAGCAGCCTGGAGGCGCTCAAGCCGATCCTTATCATTCCATTGCTG > NC_002947/914248‑914396 CTCCAGGCTGCTGGGCAAGCGCGCCCATCGGGCAATGGCCTTGGCGCTGTAACCGGCGAGGAAACCGGCGACAATGCCACCGATGAAGCCGGCCCCCAAGGTGCTGGCCAACAGGCCGCCGATCATGCCCGGGGCCAGCCCGGGGC‑‑GGTC > 2:1448116/1‑150 TCCAGGCTGCTGGGCAAGCGCGCCCATCGGGCAATGGCCTTGGCGCTGTAACCGGCGAGGAAACCGGCGACAATGCCACCGATGAAGCCGGCCCCCAAGGTGCTGGGCAACAGGCTGCCGATCACGCCAGAACCCAGCCCGTGGC‑‑GGTCG > 2:387082/1‑150 TCCAGGCTGCTGGGCAAGCGCGCCCATCGGGCAATGGCCTTGGCGCTGTAACCGGCGAGGAAACCGGCGACAATGCCACCGATGAAGCCGGCCCCCAAGGTGCTGGCCAACAGGCCGCCGATCATGCCCGGGGCCAGCCCGGGGC‑‑GGTCG < 2:1024428/150‑1 CAGGCTGCTGGGCAAGCGCGCCCATCGGGCAATGGCCTTGGCGCTGTAACCGGCGAGGAAACCGGCGACAATGCCACCGATGAAGCCGGCCCCCAAGGTGCTGGCCAACAGGCCGCCGATCATGCCCGGGGCCAGCCCGGGGC‑‑GGTCGGC > 1:1544948/1‑150 CAGGCTGCTGGGCAAGCGCGCCCATCGGGCAATGGCCTTGGCGCTGTAACCGGCGAGGAAACCGGCGACAATGCCACCGATGAAGCCGGCCCCCAAGGTGCTGGCCAACAGGCCGCCGATCATGCCCGGGGCCAGCCCGGGGC‑‑GGTCGGC > 1:780433/1‑150 GCGCGCCCATCGGGCAATGGCCTTGGCGCTGTAACCGGCGAGGAAACCGGCGACAATGCCACCGATGAAGCCGGCCCCCAAGGTGCTGGCCAACAGGCCGCCGATCATGCCCGGGGCCAGCCCGGGGC‑‑GGTCGG > 1:212255/1‑134 GCGCGCCCATCGGGCAATGGCCTTGGCGCTGTAACCGGCGAGGAAACCGGCGACAATGCCACCGATGAAGCCGGCCCCCAAGGTGCTGGCCAACAGGCCGCCGATCATGCCCGGGGCCAGCCCGGGGC‑‑GGTCGG < 2:212255/134‑1 CGATGAAGCCGGCCCCCAAGGTGCTGGCCAACAGGCCGCCGATCATGCCCGGGGCCAGCCCGGGGC‑‑GGTCGG < 1:1602201/72‑1 CGATGAAGCCGGCCCCCAAGGTGCTGGCCAACAGGCCGCCGATCATGCCCGGGGCCAGCCCGGGGC‑‑GGTCGG > 2:1602201/1‑72 CGCCGATCATGCCCGGGGCCAGCCCGGGGC‑‑GGTCGGCGGCCTGTTGGCCAGCACCTTGGGGGCCGGCTTCATCGGTGGCATTGTCGCCGGTTTCCTCGCCGGTTACAGCGCCAAGGCCATTGCCCGATGGGCGCGCTTGCCCAGCAGCCT > 2:994620/1‑150 CCGATCATGCCCGGGGCCAGCCCGGGGC‑‑GGTCGGCGGCCTGTTGGCCAGCACCTTGGGGGCCGGCTTCATCGGTGGCATTGTCGCCGGTTTCCTCGCCGGTTACAGCGCCAAGGCCATTGCCCGATGGGCGCGCTTGCCCAGCAGCCTGG > 1:603304/1‑150 GATCATGCCCGGGGCCAGCCCGGGGC‑‑GGTCGGCGGCCTGTTGGCCAGCACCTTGGGGGCCGGCTTCATCGGTGGCATTGTCGCCGGTTTCCTCGCCGGTTACAGCGCCAAGGCCATTGCCCGATGGGCGCGCTTGCCCAGCAGCCTGGAG < 1:994620/150‑1 ATCATGCCCGGGGCCAGCCCGGGGC‑‑GGTCGGCGGCCTGTTGGCCAGCACCTTGGGGGCCGGCTTCATCGGT > 2:1259987/1‑71 ATCATGCCCGGGGCCAGCCCGGGGC‑‑GGTCGGCGGCCTGTTGGCCAGCACCTTGGGGGCCGGCTTCATCGGT < 1:1259987/71‑1 ATGCCCGGGGCCAGCCCGGGGCATGATCGGCGGCCTGTTGGCCAGCACCTTGGGGGCCGGCTTCATCGGTGGCATTGTCGCCGGTTTCCTCGCCGGTTACAGCGCCAAGGCCATTGCCCGATGGGCGCGCTTGCCCAGCAGCCTGGAGGC > 2:1476650/1‑150 GGCCTGTTGGCCGTTACCTGGGGGGCCGGCTTCATCGGTAGCATTTTCGCCGGTTTCCTCGCCGGTTACAGCGCCAAGGCCATTGCCCGATGGGCGCGCTTGCCCAGCAGCCTGGAGGCGCTCAAGCCGATCCTTATCATTCCATTGCTG < 2:386152/150‑1 GGCCTGTTGGCCAGCACCTTGGGGGCCGGCTTCATCGGTGGCATTGTCGCCGGTTTCCTCGCCGGTTACAGCGCCAAGGCCATTGCCCGATGGGCGCGCTTGCCCAGCATCCTGGAGGCGCTCAAGCCGATCCTTATCATTCCATTGCTG < 1:2294657/150‑1 GGCCTGTTGGCCAGCACCTTGGGGGCCGGCTTCATCGGTGGCATTGTCGCCGGTTTCCTCGCCGGTTACAGCGCCAAGGCCATTGCCCGATGGGCGCGCTTGCCCAGCAGCCTGGAGGCGCTCAAGCCGATCCTTATCATTCCATTGCTG > 1:619359/1‑150 CTCCAGGCTGCTGGGCAAGCGCGCCCATCGGGCAATGGCCTTGGCGCTGTAACCGGCGAGGAAACCGGCGACAATGCCACCGATGAAGCCGGCCCCCAAGGTGCTGGCCAACAGGCCGCCGATCATGCCCGGGGCCAGCCCGGGGC‑‑GGTCGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/914363‑914210‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcggcgGCCTGTTGGCCAGCACCTTGGGGGCCGGCTTCATCGGTGGCATTGTCGCCGGTTTCCTCGCCGGTTACAGCGCCAAGGCCATTGCCCGATGGGCGCGCTTGCCCAGCAGCCTGGAGGCGCTCAAGCCGATCCTTATCATTCCATTGCTG > NC_002947/914248‑914396 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |