| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 1102896 | 81 (0.910) | 11 (0.130) | 7/244 | NT | 12.1% | intergenic (+30/‑88) | ttg2E/ttg2F | toluene‑tolerance protein/BolA family protein |
| ? | NC_002947 | = 1102921 | 80 (0.910) | intergenic (+55/‑63) | ttg2E/ttg2F | toluene‑tolerance protein/BolA family protein | |||||
ATGCGGGATGCTCAGGCCACTGGCAAGGCGTGCGAGGTGCGTGGCATGCCTGATGATATGCGGGAAATTGCCGAGGTCTATGATCTCGATGAAGTGCTGGCAAGCTAGTGGCCAGGCACGGATGATGGCCCCTCGGTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1102759‑1102896‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cTGCGAAGCCCAACGAAGGCTTCGCTGACCGAGGGGCCATCATCCGTGCCTGGCCACTAGCTTGCCAGCACTTCATCGAGATCATAGACCTCGGCAATTTCCCGCATATCATCAGGCATGCCACGCACCTCGCACGCCTTGCCAGTGGCC < NC_002947/1102921‑1102773 ATGCGGGATGCTCAGGCCACTGGCAAGGCGTGCGAGGTGCGTGGCATGCCTGATGATATGCGGGAAATTGCCGAGGTCTATGATCTCGATGAAGTGCTGGCAAGCTAGTGGCCAGGCACGGATGATGGCCCCTCGGTCCGCGAA > 1:364724/1‑144 GCTCAGGCCACTGGCAAGGCGTGCGAGGTGCGTGGCATGCCTGATGATATGCGGGAAATTGCCGAGGTCTATGATCTCGATGAAGTGCTGGCAAGCTAGTGGCCAGGCACGGATGATGGCCCCTCGGTCAGCGAAGCCCAACGAAGGCTT < 1:1804479/150‑1 AGGCCACTTGCAAGGCGTGCGAGTTGCGTGGCATGCCTGATGATATGCGGGAAATTGCCGAGGTCTATGATCTCGATGAAGTGCTGGCAAGCTAGTGGCCAGGCACGGATGATGGCCCCTCGGTCAGCGAAGCCCAACGAAGGCTTCGtt < 1:1101879/150‑3 gggaAAGGCGTGCGAGGTGCGTGGCATGCCTGATGATATGCGGGAAATTGCCGAGGTCTATGATCTCGATGAAGTGCTGGCAAGCTAGTGGCCAGGCACGGATGACGGCCCCTC‑GCCTGCGAAGCCCAACGAAGTCTTCGCTGACCGAGG < 2:220497/146‑1 GGCAAGGCGTGCGAGGTGCGTGGCATGCCTGATGATATGCGGGAAATTGCCGAGGTCTATGATCTCGATGAAGTGCTGGCAAGCTAGTGGCCAGGCACGGATGATGGCCCCTC‑GCCTGCGAAGCCCAACGAAGGCTTCGCTGACCGAGGG < 1:1038457/150‑1 GCAAGGCGTGCGAGGTGCGTGGCATGCCTGATGATATGCGGGAAATTGCCGAGGTCTATGATCTCGATGAAGTGCTGGCAAGCTAGTGGCCAGGCACGGATGATGGCCCCTC‑GCCTGCGAAGCCCAACGAAGGCTTCGCTGACCGAGG < 1:328666/148‑1 GCAAGGCGTGCGAGGTGCGTGGCATGCCTGATGATATGCGGGAAATTGCCGAGGTCTATGATCTCGATGAAGTGCTGGCAAGCTAGTGGCCAGGCACGGATGATGGCCCCTC‑GCCTGCGAAGCCCAACGAAGGCTTCGCTGACCGAGG > 2:328666/1‑148 CGGGAAATTGCCGAGGTCTATGATCTCGATGAAGTGCTGGCAAGCTAGTGGCCAGGCACGGATGATGGCCCCTCGGTCTGCGAAGCCCAACGAAGGCTTCGCTGACCGAGGG < 1:475743/112‑1 CGGGAAATTGCCGAGGTCTATGATCTCGATGAAGTGCTGGCAAGCTAGTGGCCAGGCACGGATGATGGCCCCTCGGTCTGCGAAGCCCAACGAAGGCTTCGCTGACCGAGGG > 2:475743/1‑112 TCTCGATGAAGTGCTGGCAAGCTAGTGGCCAGGCACGGATGATGGCCCCTCGGTCTGCGAAGCCCAACGAAGGCTTCGCT < 1:1762011/80‑1 TCTCGATGAAGTGCTGGCAAGCTAGTGGCCAGGCACGGATGATGGCCCCTCGGTCTGCGAAGCCCAACGAAGGCTTCGCT > 2:1762011/1‑80 CTGCGAAGCCCAACGAAGGCTTCGCTGACCGAGGGGCCATCATCCGTGCCTGGCCACTAGCTTGCCAGCACTTCATCGAGATCATAGACCTCGGCAATTTCCCGCATATCATCAGGCATGCCACGCACCTCGCACGCCTTGCCAGTGGCC > 1:221170/1‑150 CTGCGAAGCCCAACGAAGGCTTCGCTGACCGAGGGGCCATCATCCGTGCCTGGCCACTAGCTTGCCAGCACTTCATCGAGATCATAGACCTCGGCAATTTCCCGCATATCATCAGGCATGCCACGCACCTCGCAC < 1:27180/135‑1 CTGCGAAGCCCAACGAAGGCTTCGCTGACCGAGGGGCCATCATCCGTGCCTGGCCACTAGCTTGCCAGCACTTCATCGAGATCATAGACCTCGGCAATTTCCCGCATATCATCAGGCATGCCACGCACCTCGCAC > 2:27180/1‑135 ATGCGGGATGCTCAGGCCACTGGCAAGGCGTGCGAGGTGCGTGGCATGCCTGATGATATGCGGGAAATTGCCGAGGTCTATGATCTCGATGAAGTGCTGGCAAGCTAGTGGCCAGGCACGGATGATGGCCCCTCGGTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1102759‑1102896‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cTGCGAAGCCCAACGAAGGCTTCGCTGACCGAGGGGCCATCATCCGTGCCTGGCCACTAGCTTGCCAGCACTTCATCGAGATCATAGACCTCGGCAATTTCCCGCATATCATCAGGCATGCCACGCACCTCGCACGCCTTGCCAGTGGCC < NC_002947/1102921‑1102773 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |