New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1371738 =	84 (0.950)	4 (0.050)	4/224	NT	5.2%	intergenic (+5/+67)	PP_1196/rimO	hypothetical protein/ribosomal protein S12 methylthiotransferase
	?	NC_002947	1371789 =	68 (0.840)					intergenic (+56/+16)	PP_1196/rimO	hypothetical protein/ribosomal protein S12 methylthiotransferase

TCGATGGCGACCATGGTTTCAAGCCAGGCGACAAAGTGCGTTGCCGTGTGGTGGATGCCGACGAGTACGACATGTGGGCTGAACCCATCTAAAACGGCTGAAGCCTGCAAAGCCCCTGCCCCGGCGTTCTCCATAGGGAATGACCGGCGCAGGGGCTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/1371896‑1371738 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcaggggctttGCAGGCTTCAGCCGTTTTAGATGGGTTCAGCCCACATGTCGTACTCGTCGGCATCCACCACACGGCAACGCACTTTGTCGCCTGGCTTGAAACCATGGTCGCCATCGATGAACACGCTGCCGTCGATTTCCGGTGCATCGAAGAAGC  >  NC_002947/1371789‑1371935                                                                                                                                                                                                                                                                                                                    TCGATGGCGACCATGGTTTCAAGCCAGGCGACAAAGTGCGTTGCCGTGTGGTGGATGCCGACGAGTACGACATGTGGGCTGAACCCATCTAAAACGGCTGAAGCCTGCAAAGCCCCTGCCCCGGCGTTCTCCATAGGGAATGACCGGCGC                                                                                                                                                              >  2:2113117/1‑150    ATGGCGACCATGGTTTCAAGCCCGCCCAGTAAGTTGGTTGCCGTGTGGTGGATGCCGACGAGTACGACATGTGGGCTGAACCCATCTAAAACGGCTGAAGCCTGCAAAGCCCCTGCCCCGGCGTTCTCCATAGGGAATGACCGGCGCAGG                                                                                                                                                           <  2:2108992/150‑1    ATGGCGACCATGGTTTCAAGCCAGGCGACAAAGTGCGTTGCCGTGTGGTGGATGCCGACGAGTACGACATGTGGGCTGAACCCATCTAAAACGGCTGAAGCCTGCAAAGCCCCTGCCCCGGCGTTCTCCATAGGGAATGACCGGCGCAGG                                                                                                                                                           <  1:2113117/150‑1    ATGGCGACCATGGTTTCAAGCCAGGCGACAAAGTGCGTTGCCGTGTGGTGGATGCCGACGAGTACGACATGTGGGCTGAACCCATCTAAAACGGCTGAAGCCTGCAAAGCCCCTGCCCCGGCGTTCTCCATAGGGAATGACCGGCGCAGG                                                                                                                                                           <  2:761207/150‑1                                                                                                            CAAAGCCCCTGCCCCGGCGTTCTCCATAGGGAATGACCGGCGCAGGGGCTTTGCAGGCGTCAGCCGATTTAGATGGGTTCAGCCCACATGTCGTACTCGTCGGCATCCACCACACGGCAACGCACTTTGTCGCCTGGCTTGAAACCATGG                                                   >  1:895115/1‑150                                                                                                                 CCCCTGCCCCGGCGTTCTCCATAGGGAATGACCGGCGCAGGGGCTTTGCAGGCTTCAGCCGTTTTAGATGGGTTCAGCCAACATGTCGTACTCGTCGGCATCCACCACACGGCAACGCACTTTGTCGCCTGGCTTGAAACCATGGTCGCC                                              >  2:2072488/1‑150                                                                                                                    CTGCCCCGGCGTTCTCCATAGGGAATGACCGGCGCAGGGGCTTTGCAGGCTTCAGCCGTTTTAGATGGGTTCAGCCCACATGTCGTACTCGTCGGCATCCACCACACGGCAACGCACTTTGTC                                                                      >  1:1958878/1‑123                                                                                                                    CTGCCCCGGCGTTCTCCATAGGGAATGACCGGCGCAGGGGCTTTGCAGGCTTCAGCCGTTTTAGATGGGTTCAGCCCACATGTCGTACTCGTCGGCATCCACCACACGGCAACGCACTTTGTC                                                                      <  2:1958878/123‑1                                                                                                                                                       AGGGGCTTTGAAGGCTTCAGCCGTGTTAGATGGGTTCAGCCCACATGTCGTACTCGTCGGCATCCACCACACGGCAACGCACTTTGTCGCCTGGCTTGAAACCATGGTCGCCATCGATGAACACGCTGCCGTCGATTTCCGGTGCATCGA        >  2:594380/1‑150                                                                                                                                                        atctCTTTGCAGGCTTCAGCCGTTTTAGATGGGTCAAGCCTACATTTCGTACTCGTCGGCATCCACCACACGGCAACGCACTTTGTCGCCTGGCTTGAAACCATGGTCGCCATCGATGAACACGCTGCCGTCGATTTCCGGTGCATCGAA       <  2:1470742/146‑1                                                                                                                                                        GGGGCTTTGCAGGCTTCAGCCGTTTTAGATGGGTTCAGCCCACATGTCGTACTCGTCGGCATCCACCACACGGCAACGCACTTTGTCGCCTGGCTTGAAACCATGGTCGCCATCGATGAACACGCTGCCGTCGATTTCCGGTGCATCGAA       <  1:1402233/150‑1                                                                                                                                                           GCTTTGCAGGCTTCAGCCGTTTTAGATGGGTTCAGCCCACATGTCGTACTCGTCGGCATCCACCACACGGCAACGCACTTTGTCGCCTGGCTTGAAACCATGGTCGCCATCGATGAACACGCTGCCGTCGATTTCCGGTGCATCGAAGAA    <  1:2111664/150‑1                                                                                                                                                             TTTGCAGGCTTCAGCCGTTTTAGATGGGTTCAGCCCACATGTCGTACTCGTCGGCATCCACCACACGGCAACGCACTTTGTCGCCTGGCTTGAAACCATGGTCGCCATCGATGAACACGCTGCCGTCGATTTCCGGTGCATCGAAGAgat  >  1:1470742/1‑147                                                                                                                                                                                                                                                                                                                    TCGATGGCGACCATGGTTTCAAGCCAGGCGACAAAGTGCGTTGCCGTGTGGTGGATGCCGACGAGTACGACATGTGGGCTGAACCCATCTAAAACGGCTGAAGCCTGCAAAGCCCCTGCCCCGGCGTTCTCCATAGGGAATGACCGGCGCAGGGGCTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/1371896‑1371738 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcaggggctttGCAGGCTTCAGCCGTTTTAGATGGGTTCAGCCCACATGTCGTACTCGTCGGCATCCACCACACGGCAACGCACTTTGTCGCCTGGCTTGAAACCATGGTCGCCATCGATGAACACGCTGCCGTCGATTTCCGGTGCATCGAAGAAGC  >  NC_002947/1371789‑1371935

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.