| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 1436044 | 109 (1.230) | 9 (0.110) | 7/230 | NT | 9.4% | intergenic (‑74/+79) | PP_1256/PP_1257 | alpha‑ketoglutarate semialdehyde dehydrogenase/1‑pyrroline‑4‑hydroxy‑2‑carboxylate deaminase |
| ? | NC_002947 | = 2957176 | 71 (0.860) | intergenic (+88/‑108) | PP_2588/PP_2589 | class III aminotransferase/aldehyde dehydrogenase family protein | |||||
TGGTTGGGTCGATGGCACGGATGGCGTCGCGGCTGCCGGTTACCGGCCTCTGGCCGATCAGCAGGTTGCCTGTGAGGGGCATGTAGCCTCCTTGGAAATCTAATGCAGATGCATGGGGGGGATTACGACCCCTGTAGGAGCGGGTTCACCCGCGAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1435889‑1436044‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cccgcgaa‑TCAGGCGACACGGTGGATGGCACCGGCTTCGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAGGGAAGCGCGTTGCCCTTGTCAGCGGCTTACAGCTTGCCGACCAGCCGCGCCGTGCGGTCTACGGCTATCCGGGTCTTCTCCAC < NC_002947/2957176‑2957032 TGGTTGGGTCGATGGCACGGATGGCGTCGCGGCTGCCGGTTACCGGCCTCTGGCCGATCAGCAGGTTGCCTGTGAGGGGCATGTAGCCTCCTTGGAAATCTAATGCAGATGCATGGGGGGGATTACGACCCCTGTAGGAGCGGGTTCACC < 2:159298/150‑1 TTGGGTCGATGGCACGGATGGCGTCGCGGCTGCCGGTTACAGGCCTCCGTAGGGGCAGCAGGTTGCCTGTGAGGGGCATGTAGCCTCCTTGGAAATCTAATGCAGATGCATGGGGGGGATTACGACCCCTGTAGGAGCGGGTTCACCCGC < 2:63790/150‑1 GGTCGATGGCACGGATGGCGTCGCGGCTGCCGGTTACCGGCCTCTGGCCGATCAGCAGGTTGCCTGTGAGGGGCATGTAGCCTCCTTGGAAATCTAATGCAGATGCATGGGGGGGATTACGACCCCTGTAGGAGCGGGTTCACCCGCGAA > 1:1084117/1‑150 GGTCGATGGCACGGATGGCGTCGCGGCTGCCGGTTACCGGCCTCTGGCCGATCAGCAGGTTGCCTGTGAGGGGCATGTAGCCTCCTTGGAAATCTAATGCAGATGCATGGGGGGGATTACGACCCCTGTAGGAGCGGGTTCACCCGCGAA > 1:991886/1‑150 ACCGGCCTCTGGCCGATCAGCAGGTTGCCTGTGAGGGGCATGTAGCCTCCTTGGAAATCTAATGCAGATGCATGGGGGGGATTACGACCCCTGTAGGAGCGGGTTCACCCGCGAACACCGGCGACCCGGTGCATGGCACCGGCTTCGCCG < 1:1284959/150‑1 ACCGGCCTCTGGCCGATCAGCAGGTTGCCTGTGAGGGGCATGTAGCCTCCTTGGAAATCTAATGCAGATGCATGGGGGGGATTACGACCCCTGTAGGAGCGGGTTCACCCGCGAACACCGGCGACCCGGTGCATGGCACCGGCTTCGCCG < 2:1752068/150‑1 CGGCCTCTGGCCGATCAGCAGGTTGCCTGTGAGGGGCATGTAGCCTCCTTGGAAATCTAATGCAGATGCATGGGGGGGATTACGACCCCTGTGGGAGCGGGCGTGCCCGCGAA‑TCAGGCGACCCGGTGCATGGCACCGGCTTCGCCGGTG > 1:1559743/1‑150 CGGCCTCTGGCCGATCAGCAGGTTGCCTGTGAGGGGCATGTAGCCTCCTTGGAAATCTAATGCAGATGCATGGGGGGGATTACGACCCCTGTAGGAGCGGGTTCACCCGCGAA‑TCAGGCGACCCGGTGCATGGCACCGGCTTCGCCGGTG > 2:1859322/1‑150 GGCCTCTGGCCGTTCGGTAGCTTTCCTGTGAGGGGCATGTAGCCTCCTTGGAAATCTAATGCAGATGCATGGGGGGGATTACGACCCCTGTAGGAGCGGTTTCACCCGCGAA‑TCAGGCGACCCGGTGCATGGCACCGGCTTCGCCGGTGT < 2:748874/150‑1 GCCTCTGGCCGATCAGCAGGTTGCCTGTGAGGGGCATGTAGCCTCCTTGGAAATCTAATGCAGATGCATGGGGGGGATTACGACCCCTGTAGGAGCGGGTTCACCCGCGAA‑TCAGGCGACCCGGTGCATGGCACCGGCTTCGCCGGTGTT < 1:164897/150‑1 CTGGCCGATCAGCAGGTTGCCTGTGAGGGGCATGTAGCCTCCTTGGAAATCTAATGCAGATGCATGGGGGGGATTACGACCCCTGTAGGAGCGGGTTCACCCGCGAA‑TCAGGCGACCCGGTGCATGGCACCGGCTTCGCCGGTGTTCGCG < 1:1859322/150‑1 CCTGTGAGGGGCATGTAGCCTCCTTGGAAATCTAATGCAGATGCATGGGGGGGATTACGACCCCTGTGGGAGCGGGCGTGCCCGCGAA‑TCAGGCGACCCGGTGCATGGCACCGGCTTCGCCGGTGTTCGCGGGTGAACCCGCTCCTACAG < 2:1559743/150‑1 TGAGGGGCATGTAGCCTCCTTGGAAATCTAATGCAGATGCATGGGGGGGATTACGACCCCTGTAGGAGCGGGTTCACCCGC > 1:2107366/1‑81 TGAGGGGCATGTAGCCTCCTTGGAAATCTAATGCAGATGCATGGGGGGGATTACGACCCCTGTAGGAGCGGGTTCACCCGC < 2:2107366/81‑1 ATCTAATGCAGATGCATGGGGGGGATTACGACCCCTGTAGGAGCGGGTTCACCCGCGAACACCGGCGACCCGGTGCATGGCACCGGCT < 1:1288127/88‑1 CCCGCGAA‑TCAGGCGACACGGTGGATGGCACCGGCTTCGCCGGTGTTCGCGGGCGTGCCCGCGCCCACATGGAAGCTGGTTGCCCTTGTCAGCGGCTTACAGCTTGCCGACCAGCCGCGCCGTGCGGTCTACGGCTATCCGGGTCTTCTC < 2:82853/150‑1 CCCGCGAA‑TAAGGCGACAAGGTGGCTGGATCCGTCTTCGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAGGGAAGCGCGTTGCCCTTGTCAGCGGCTTACAGCTTGCCGACCAGCCGCGCCGTGCGGTCTACGGCTATCCGGGTCTTCTC < 2:22280/150‑1 CCGCGAA‑TCAGGCGACACGGTGGATGGCACCGGCTTCGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAGGGAAGCGCGTTGCCCTTGTCAGCGGCTTACAGCTTGCCGACCAGCCGCGCCGTGCGGTCTACGGCTATCCGGGTCTTCTCC > 1:1836978/1‑150 CCGCGAA‑TCAGGCGACACGGTGGATGGCACCGGCTTCGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAGGGAAGCGCGTTGCCCTTGTCAGCGGCTTACAGCTTGCCGACCAGCCGCGCCGTGCGGTCTACGGCTATCCGGGTCTTCTCC > 1:1836965/1‑150 GCGAA‑TCAGGCGACACGGTGGATGGCACCGGCTTCGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAGGGAAGCGCGTTGCCCTTGTCAGCGGCTTACAGCTTGCCGACCAGCCGCGCCGTGCGGTCTACGGCTATCCGGGTCTTCTCCAC > 2:1203289/1‑150 TGGTTGGGTCGATGGCACGGATGGCGTCGCGGCTGCCGGTTACCGGCCTCTGGCCGATCAGCAGGTTGCCTGTGAGGGGCATGTAGCCTCCTTGGAAATCTAATGCAGATGCATGGGGGGGATTACGACCCCTGTAGGAGCGGGTTCACCCGCGAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1435889‑1436044‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cccgcgaa‑TCAGGCGACACGGTGGATGGCACCGGCTTCGCCGGTGTTCGCGGGCGTGCCCGCTCCCACAGGGAAGCGCGTTGCCCTTGTCAGCGGCTTACAGCTTGCCGACCAGCCGCGCCGTGCGGTCTACGGCTATCCGGGTCTTCTCCAC < NC_002947/2957176‑2957032 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |