New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1469388 =	84 (0.950)	9 (0.110)	8/230	NT	9.8%	coding (762/1455 nt)	algK	alginate biosynthesis protein AlgK
	?	NC_002947	1469416 =	88 (1.060)					coding (734/1455 nt)	algK	alginate biosynthesis protein AlgK

GCTGAACACCACCGACATCTGCTACGTCGAACTGGCCACCGTGTACCAGAAACGTGGCCAGGCCGATCAGCAAGCCGCCCTGCTCGGCCAGCTGAAATCCGCCTATGCCCGTGGCGCCGTACCGGCCACCCGGGTTGACAGCGTGGCCCGGGTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/1469541‑1469388 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cccgggtgGCCGGTACGGCGCCACGGGCATAGGCGGATTTCAGCTGGCCGAGCAGGGCGGCTTGCTGATCGGCCTGGCCACGTTTCTGGTACACGGTGGCCAGTTCGACGTAGCAGATGTCGGTGGTGTTCAGCGCGGCCTTGCAGATCTTTTCCA  >  NC_002947/1469416‑1469563                                                                                                                                                                                                                                                                                                                GCTGAACACCACCGACATCTGCTACGTCGAACTGGCCACCGTGTACCAGAAACGTGGCCAGGCCGATCAGCAAGCCGCCCTGCTCGGCCAGCTGAAATCCGCCTATGCCCGTGGCGCCGTACCGTCCACCCGGGTTGACAGCGTGGCCCG                                                                                                                                                          >  1:613132/1‑150   TGAACACCACCGACATCTGCTACGTCGAACTGGCCACCGTGTACCAGAAACGTGGCCTTCCCGATCAGCAAGCCGCCCTGCTCGGCCAGCTGAAATCCGCCTATGCCCGTGGCGCCGTACCGGCCACCCGGGTTGACAGCGTGGCCCGGG                                                                                                                                                        <  1:1835112/150‑1   TGAACACCACCGACATCTGCTACGTCGAACTGGCCACCGTGTACCAGAAACGTGGCCAGGCCGATCAGCAAGCCGCCCTGCTCGGCCAGCTGAAATCCGCCTATGCCCGTGGCGCCGTACCGGCCACCCGGGTTGACAGCGTGGCCCGGG                                                                                                                                                        >  1:1455374/1‑150    GAACACCACCGACATCTGCTACGTCGAACTGGCCACCGTGTACCAGAAACGTGGCCAGGCCGATCAGCAAGCCGCCCTGCTCGGCCAGCTGAAATCCGCCTATGCCCGTGGCGCCGTACCGGCCACCCGGGTTGACAGCGTGGCCCGGGT                                                                                                                                                       <  1:101590/150‑1                                                                                         CAGCTGAAATCCGCCTATGCCCGTGGCGCCGTACCGGCCACCCGGGTTGACAGCGTGGCCCGGG                                                                                                                                                        <  1:1035643/64‑1                                                                                         CAGCTGAAATCCGCCTATGCCCGTGGCGCCGTACCGGCCACCCGGGTTGACAGCGTGGCCCGGG                                                                                                                                                        >  2:1035643/1‑64                                                                                                                             GCCACCCGGGTTGACAGCGTGGCCCGGGTGGCCGGTACGGCGCCACGGGCATAGGC                                                                                                                            >  1:433476/1‑56                                                                                                                             GCCACCCGGGTTGACAGCGTGGCCCGGGTGGCCGGTACGGCGCCACGGGCATAGGC                                                                                                                            <  2:433476/56‑1                                                                                                                               CACCCGGGTTGACAGCGTGGCCCGGGT‑GCCGGTACGGCGCCACGGGCATAGGCGGATTTCAGCTGGCCGAGCAGGGCGGCTTGCTGATCGGCCTGGCCACGTTTCTGGTACACGGTGGCCAGTTCGACGTAGCAGATGTCGGTGGTGTTC                           >  1:217258/1‑150                                                                                                                                 CCCGGGTTGACAGCGTGGCCCGGGTGGCCGGTACGGCGCCACGGGCATAGGCGGATTTCAGCTGGCCGAGCAGGGCGGCTTGCTGATCGGCCTGGCCACGTTTCTGGTACACGGTGGCCAGTTCGACGTAGCAGATGTCGGTGGTGTTCA                          >  2:1186437/1‑150                                                                                                                                 CCCGGGTTGACAGCGTGGCCCGGGTGGCCGGTACGGCGCCACGGGCATAGGCGGATTTCAGCTGGCCGAGCAGGGCGGCTT                                                                                               <  1:226418/81‑1                                                                                                                                 CCCGGGTTGACAGCGTGGCCCGGGTGGCCGGTACGGCGCCACGGGCATAGGCGGATTTCAGCTGGCCGAGCAGGGCGGCTT                                                                                               >  2:226418/1‑81                                                                                                                                  CCGGGTTGACAGCGTGGCCCGGGTGGCCGGTACGGCGCCACGGGCATAGGCGGATTTCAGCTGGCCGAGCAGGGCGGCTTGCTGATCGGCCTGGCCACGTTTCTGGTACACGGTGGCCAGTTCGACGTAGCAGATGTCGGTGGTGTTCAG                         >  1:1579002/1‑150                                                                                                                                    GGGTTGACAGCGTGGCCCGGGTGGCCGGTACGGCGCCACGGGCATAGGCGGATTTCAGCTGGCCGAGCAGGGC                                                                                                    <  2:607317/73‑1                                                                                                                                    GGGTTGACAGCGTGGCCCGGGTGGCCGGTACGGCGCCACGGGCATAGGCGGATTTCAGCTGGCCGAGCAGGGC                                                                                                    >  1:607317/1‑73                                                                                                                                                   CCCGGGTGGCCGGTACGGCGCCACGGGCATAGGCGGATTTCAGCTGGCCGAGCAGGGCGGCTTGCTGATCGGCCTGGCCACGTTTCTGGTACACGGTGGCCAGTTCGACGTAGCAGATGTCGGTGGTGTTCAGCGCGGCCTTGCAGATCT        >  2:1594903/1‑150                                                                                                                                                    CCGGGTGGCCGGTACGGCGCCACGGGCATAGGCGGATTTCAGCTGGCCGAGCAGGGCGGCTTGCTGATCGGCCTGGCCACGTTTCTGGTACACGGTGGCCAGTTCGAC                                                 <  2:295683/108‑1                                                                                                                                                    CCGGGTGGCCGGTACGGCGCCACGGGCATAGGCGGATTTCAGCTGGCCGAGCAGGGCGGCTTGCTGATCGGCCTGGCCACGTTTCTGGTACACGGTGGCCAGTTCGAC                                                 >  1:295683/1‑108                                                                                                                                                    CCGGGTGGCCGGTACAGCGCCACGGGCCCAGGCGGATTTCAGCTGGCCGAGCAGGGGGGCTTGCTGATCGGCCTGGCCACGTTTCTGGTACACGGTGGCGAGTTCGACGTAGCGGATGTCGGTTGTGTTCAGCGTGGGCTTGGAGATCTT       >  2:2354847/1‑150                                                                                                                                                     CGGGTGGCCGGTACGGCGCCACGGGCATAGGCGGATTTCAGCTGGCCGAGCAGGGCGGCTTGCTGATCGGCCTCGGCACGTTTCTGGTACACGGTTTTTAGTTCGACGTAGCAGATGTCGGTGGTGTTCAGCGCGGCCTTGCAGATCTTT      <  1:902553/150‑1                                                                                                                                                     CGGGT‑GCCGGTACGGCGCCACGGGCATAGGCGGATTTCAGCTGGCCGAGCAGGGCGGCTTGCTGATCGGCCTGGCCACGTTTCTGGTACACGGTGGCCAGTTCGACGTAGCAGATGTCGGTGGTGTTCAGCGCGGCCTTGCAGATCTTTT     <  2:217258/150‑1                                                                                                                                                       GGTGGCCGGTACGGCGCCACGGGCATAGGCGGATTTCAGCTGGCCGAGCAGGGCGGCTTGCTGATCGGCCTGGCCACGTTTCTGGTACACGGTGGCCAGTTCGACGTAGCAGATGTCGGTGGTGTTCAGCGCGGCCTTGCAGATCTTTTC    <  2:1606167/150‑1                                                                                                                                                         TGGCCGGTACGGCGCCACGGGCATAGGCGGATTTCAGCTGGCCGAGCAGGGCGGCTTGCTGATCGGCCTGGCCACGTTTCTGGTACACGGTGGCCAGTGCGACGTAGCAGATGTCGGTGGTGTTCAGCGCGGCCTTGCAGACCTTTTCCA  <  2:1843984/150‑1                                                                                                                                                                                                                                                                                                                GCTGAACACCACCGACATCTGCTACGTCGAACTGGCCACCGTGTACCAGAAACGTGGCCAGGCCGATCAGCAAGCCGCCCTGCTCGGCCAGCTGAAATCCGCCTATGCCCGTGGCGCCGTACCGGCCACCCGGGTTGACAGCGTGGCCCGGGTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/1469541‑1469388 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cccgggtgGCCGGTACGGCGCCACGGGCATAGGCGGATTTCAGCTGGCCGAGCAGGGCGGCTTGCTGATCGGCCTGGCCACGTTTCTGGTACACGGTGGCCAGTTCGACGTAGCAGATGTCGGTGGTGTTCAGCGCGGCCTTGCAGATCTTTTCCA  >  NC_002947/1469416‑1469563

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.